HEADER IMMUNE SYSTEM 10-DEC-19 6V7Z TITLE HUMAN CD1D PRESENTING ALPHA-GALACTOSYLCERAMIDE IN COMPLEX WITH VHH TITLE 2 NANOBODY 1D22 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTIGEN-PRESENTING GLYCOPROTEIN CD1D; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: R3G1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 8 CHAIN: B, D; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: NANOBODY VHH ID22; COMPND 12 CHAIN: E, F; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CD1D; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HI5; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PFASTBAC; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 GENE: B2M, CDABP0092, HDCMA22P; SOURCE 17 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 18 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 20 EXPRESSION_SYSTEM_CELL_LINE: HI5; SOURCE 21 EXPRESSION_SYSTEM_VECTOR_TYPE: BACMID; SOURCE 22 EXPRESSION_SYSTEM_PLASMID: PFASTBAC; SOURCE 23 MOL_ID: 3; SOURCE 24 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 25 ORGANISM_COMMON: LLAMA; SOURCE 26 ORGANISM_TAXID: 9844; SOURCE 27 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 29 EXPRESSION_SYSTEM_STRAIN: TG1; SOURCE 30 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 31 EXPRESSION_SYSTEM_PLASMID: PMEK219 KEYWDS LIPID, NANOBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.SHAHINE,J.ROSSJOHN REVDAT 2 11-OCT-23 6V7Z 1 REMARK REVDAT 1 16-SEP-20 6V7Z 0 JRNL AUTH A.SHAHINE,J.ROSSJOHN JRNL TITL A SINGLE-DOMAIN BISPECIFIC ANTIBODY TARGETING CD1D AND THE JRNL TITL 2 NKT T-CELL RECEPTOR INDUCES A POTENT ANTITUMOR RESPONSE. JRNL REF NAT CANCER 2020 JRNL REFN ESSN 2662-1347 JRNL DOI 10.1038/S43018-020-00111-6 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 37863 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 1860 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.3090 - 6.4604 1.00 2946 168 0.2053 0.2810 REMARK 3 2 6.4604 - 5.1301 1.00 2825 137 0.1828 0.2345 REMARK 3 3 5.1301 - 4.4823 1.00 2813 127 0.1298 0.1753 REMARK 3 4 4.4823 - 4.0728 1.00 2757 168 0.1405 0.1902 REMARK 3 5 4.0728 - 3.7810 1.00 2759 133 0.1690 0.2088 REMARK 3 6 3.7810 - 3.5582 1.00 2769 133 0.1827 0.2683 REMARK 3 7 3.5582 - 3.3800 1.00 2750 127 0.1925 0.2522 REMARK 3 8 3.3800 - 3.2329 1.00 2752 146 0.2116 0.3196 REMARK 3 9 3.2329 - 3.1085 1.00 2732 150 0.2385 0.3239 REMARK 3 10 3.1085 - 3.0013 1.00 2733 139 0.2437 0.3384 REMARK 3 11 3.0013 - 2.9074 1.00 2709 148 0.2464 0.3476 REMARK 3 12 2.9074 - 2.8244 1.00 2710 151 0.2673 0.3537 REMARK 3 13 2.8244 - 2.7500 1.00 2748 133 0.2740 0.3604 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 4:174 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.364 -6.733 -21.841 REMARK 3 T TENSOR REMARK 3 T11: 0.3552 T22: 0.3798 REMARK 3 T33: 0.4615 T12: 0.0270 REMARK 3 T13: -0.0409 T23: 0.0734 REMARK 3 L TENSOR REMARK 3 L11: 3.1097 L22: 2.4586 REMARK 3 L33: 6.9167 L12: -0.5386 REMARK 3 L13: 0.0234 L23: 0.7666 REMARK 3 S TENSOR REMARK 3 S11: -0.2648 S12: -0.2674 S13: 0.1776 REMARK 3 S21: 0.0181 S22: 0.2724 S23: 0.3885 REMARK 3 S31: -0.1753 S32: -0.6903 S33: -0.0043 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 175:278 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.348 -6.719 -2.988 REMARK 3 T TENSOR REMARK 3 T11: 0.4694 T22: 0.3642 REMARK 3 T33: 0.3963 T12: 0.0650 REMARK 3 T13: -0.0180 T23: 0.0552 REMARK 3 L TENSOR REMARK 3 L11: 3.5087 L22: 1.6319 REMARK 3 L33: 3.0528 L12: 0.9046 REMARK 3 L13: 1.7003 L23: -0.1490 REMARK 3 S TENSOR REMARK 3 S11: -0.0266 S12: -0.2627 S13: -0.0398 REMARK 3 S21: 0.1665 S22: -0.1500 S23: -0.2467 REMARK 3 S31: -0.0237 S32: 0.3348 S33: 0.1522 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN B AND RESID 0:98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.134 -22.514 -5.857 REMARK 3 T TENSOR REMARK 3 T11: 0.4375 T22: 0.3712 REMARK 3 T33: 0.5300 T12: 0.0281 REMARK 3 T13: -0.0298 T23: 0.1022 REMARK 3 L TENSOR REMARK 3 L11: 2.6935 L22: 5.0706 REMARK 3 L33: 3.5099 L12: 0.7607 REMARK 3 L13: 0.6519 L23: 0.7874 REMARK 3 S TENSOR REMARK 3 S11: 0.1846 S12: -0.4220 S13: -0.5887 REMARK 3 S21: 0.5964 S22: -0.0239 S23: -0.3640 REMARK 3 S31: 0.4217 S32: -0.0847 S33: -0.1169 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN C AND RESID 6:107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.938 -41.073 -32.645 REMARK 3 T TENSOR REMARK 3 T11: 0.4688 T22: 0.7297 REMARK 3 T33: 0.4460 T12: 0.2132 REMARK 3 T13: 0.0572 T23: -0.0850 REMARK 3 L TENSOR REMARK 3 L11: 0.8610 L22: 3.4049 REMARK 3 L33: 4.4795 L12: 0.5133 REMARK 3 L13: 0.7101 L23: 1.3138 REMARK 3 S TENSOR REMARK 3 S11: -0.3001 S12: -0.4711 S13: 0.1262 REMARK 3 S21: 0.2325 S22: 0.0228 S23: 0.1259 REMARK 3 S31: 0.1424 S32: 0.3581 S33: 0.2684 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN C AND RESID 109:169 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.925 -40.892 -45.077 REMARK 3 T TENSOR REMARK 3 T11: 0.4263 T22: 0.4701 REMARK 3 T33: 0.3730 T12: 0.0562 REMARK 3 T13: -0.0082 T23: -0.0855 REMARK 3 L TENSOR REMARK 3 L11: 4.3642 L22: 3.9211 REMARK 3 L33: 5.1465 L12: -0.5910 REMARK 3 L13: -1.1355 L23: 0.7198 REMARK 3 S TENSOR REMARK 3 S11: -0.0969 S12: -0.6024 S13: 0.1614 REMARK 3 S21: -0.1903 S22: 0.0805 S23: -0.4153 REMARK 3 S31: -0.1788 S32: 0.8096 S33: -0.0227 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN D AND RESID 1:97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.130 -63.419 -22.885 REMARK 3 T TENSOR REMARK 3 T11: 0.8823 T22: 1.1340 REMARK 3 T33: 0.7985 T12: 0.2457 REMARK 3 T13: 0.3345 T23: 0.2825 REMARK 3 L TENSOR REMARK 3 L11: 3.6043 L22: 1.1230 REMARK 3 L33: 1.4918 L12: 1.5153 REMARK 3 L13: -1.2737 L23: -0.2703 REMARK 3 S TENSOR REMARK 3 S11: -0.4466 S12: -0.7199 S13: -0.5242 REMARK 3 S21: 0.2647 S22: 0.3667 S23: 0.2903 REMARK 3 S31: 0.4350 S32: -0.5979 S33: 0.0852 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN E AND RESID 1:117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.888 -50.150 -67.874 REMARK 3 T TENSOR REMARK 3 T11: 0.5150 T22: 0.3803 REMARK 3 T33: 0.4310 T12: -0.0644 REMARK 3 T13: -0.1446 T23: -0.0289 REMARK 3 L TENSOR REMARK 3 L11: 5.9798 L22: 4.7408 REMARK 3 L33: 7.5264 L12: -0.7144 REMARK 3 L13: -4.2761 L23: 2.0337 REMARK 3 S TENSOR REMARK 3 S11: -0.0096 S12: 0.3817 S13: 0.1111 REMARK 3 S21: -0.0988 S22: -0.0314 S23: -0.1404 REMARK 3 S31: -0.1336 S32: -0.3210 S33: 0.0212 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN F AND RESID 1:117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.090 -12.866 -52.446 REMARK 3 T TENSOR REMARK 3 T11: 0.6191 T22: 0.5877 REMARK 3 T33: 0.5274 T12: -0.2389 REMARK 3 T13: -0.0746 T23: -0.0529 REMARK 3 L TENSOR REMARK 3 L11: 4.7880 L22: 3.9015 REMARK 3 L33: 9.5375 L12: -0.3334 REMARK 3 L13: -1.8011 L23: -1.1233 REMARK 3 S TENSOR REMARK 3 S11: -0.2440 S12: 0.7013 S13: -0.0417 REMARK 3 S21: -0.5609 S22: 0.6758 S23: -0.1549 REMARK 3 S31: 0.1751 S32: -0.0212 S33: -0.3722 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN C AND RESID 170:277 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.890 -68.699 -17.698 REMARK 3 T TENSOR REMARK 3 T11: 1.0752 T22: 1.1800 REMARK 3 T33: 0.8628 T12: 0.5535 REMARK 3 T13: 0.3096 T23: 0.2782 REMARK 3 L TENSOR REMARK 3 L11: 2.1997 L22: 3.0881 REMARK 3 L33: 1.7990 L12: -0.7470 REMARK 3 L13: -0.0029 L23: 0.0224 REMARK 3 S TENSOR REMARK 3 S11: -0.9343 S12: -1.1285 S13: -0.7083 REMARK 3 S21: 0.4177 S22: 0.7497 S23: 0.2956 REMARK 3 S31: 0.5408 S32: 0.0429 S33: 0.1795 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 3 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND ((RESID 6 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 7 THROUGH 47 OR (RESID 48 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 49 THROUGH 78 OR REMARK 3 (RESID 79 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 80 REMARK 3 THROUGH 107 OR RESID 111 THROUGH 120 OR REMARK 3 (RESID 121 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB OR NAME CG OR NAME REMARK 3 CD )) OR RESID 122 THROUGH 149 OR RESID REMARK 3 151 OR RESID 153 THROUGH 159 OR RESID 161 REMARK 3 THROUGH 167 OR (RESID 168 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 169 THROUGH 181 OR (RESID 182 REMARK 3 THROUGH 183 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 184 THROUGH 185 OR (RESID 186 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 187 OR (RESID 188 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 OR NAME CG )) OR RESID 189 THROUGH 192 OR REMARK 3 (RESID 193 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 194 REMARK 3 THROUGH 196 OR (RESID 203 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 204 THROUGH 218 OR (RESID 219 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 220 THROUGH 221 REMARK 3 OR (RESID 222 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 223 OR (RESID 224 THROUGH 225 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 226 THROUGH 227 OR (RESID 228 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 229 THROUGH 245 REMARK 3 OR RESID 247 THROUGH 251)) REMARK 3 SELECTION : (CHAIN C AND ((RESID 6 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 7 THROUGH 60 OR (RESID 61 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 62 THROUGH 78 OR REMARK 3 (RESID 79 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 80 REMARK 3 THROUGH 88 OR (RESID 89 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 90 THROUGH 107 OR RESID 111 REMARK 3 THROUGH 149 OR RESID 151 OR RESID 153 REMARK 3 THROUGH 159 OR RESID 161 THROUGH 167 OR REMARK 3 (RESID 168 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 169 REMARK 3 THROUGH 196 OR RESID 203 THROUGH 245 OR REMARK 3 RESID 247 THROUGH 251)) REMARK 3 ATOM PAIRS NUMBER : 2038 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN B AND ((RESID 1 THROUGH 2 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 3 THROUGH 11 OR RESID REMARK 3 13 THROUGH 15 OR (RESID 16 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 17 THROUGH 35 OR (RESID 36 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 37 THROUGH 47 OR REMARK 3 (RESID 48 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 49 REMARK 3 THROUGH 57 OR (RESID 58 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 59 THROUGH 68 OR RESID 70 REMARK 3 THROUGH 72 OR (RESID 73 THROUGH 74 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 76 THROUGH 80 OR REMARK 3 (RESID 81 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 82 REMARK 3 THROUGH 88 OR (RESID 89 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 90 OR (RESID 91 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 92 THROUGH 96 OR (RESID 97 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG OR NAME CD )))) REMARK 3 SELECTION : (CHAIN D AND ((RESID 1 THROUGH 2 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 3 THROUGH 11 OR RESID REMARK 3 13 THROUGH 33 OR (RESID 34 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 35 THROUGH 68 OR RESID 70 REMARK 3 THROUGH 90 OR (RESID 91 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 92 THROUGH 97)) REMARK 3 ATOM PAIRS NUMBER : 809 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 3 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN E AND (RESID 1 THROUGH 2 OR (RESID REMARK 3 3 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB )) OR RESID 4 THROUGH REMARK 3 12 OR (RESID 13 THROUGH 14 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 15 THROUGH 24 OR RESID 31 REMARK 3 THROUGH 44 OR RESID 46 THROUGH 63 OR REMARK 3 (RESID 64 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 65 REMARK 3 THROUGH 85 OR (RESID 86 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 87 THROUGH 104 OR RESID 106 REMARK 3 THROUGH 117)) REMARK 3 SELECTION : (CHAIN F AND ((RESID 1 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 2 THROUGH 24 OR RESID 31 THROUGH REMARK 3 44 OR RESID 46 THROUGH 104 OR RESID 106 REMARK 3 THROUGH 117)) REMARK 3 ATOM PAIRS NUMBER : 929 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6V7Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-DEC-19. REMARK 100 THE DEPOSITION ID IS D_1000245937. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95365 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37944 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 48.780 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2PO6, 3P0G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 29% (V/V) PEG3350, 0.2M AMMONIUM REMARK 280 SULPHATE, 0.1M BIS-TRIS (PH 5.3), 3% (V/V) GLUCOSE MONOHYDRATE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.85850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.06800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 60.96650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 86.06800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.85850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 60.96650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, E, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 279 REMARK 465 LEU A 280 REMARK 465 VAL A 281 REMARK 465 PRO A 282 REMARK 465 ARG A 283 REMARK 465 GLY A 284 REMARK 465 SER A 285 REMARK 465 GLY A 286 REMARK 465 SER A 287 REMARK 465 ARG A 288 REMARK 465 ILE A 289 REMARK 465 ALA A 290 REMARK 465 ARG A 291 REMARK 465 LEU A 292 REMARK 465 GLU A 293 REMARK 465 GLU A 294 REMARK 465 LYS A 295 REMARK 465 VAL A 296 REMARK 465 LYS A 297 REMARK 465 THR A 298 REMARK 465 LEU A 299 REMARK 465 LYS A 300 REMARK 465 ALA A 301 REMARK 465 GLN A 302 REMARK 465 ASN A 303 REMARK 465 SER A 304 REMARK 465 GLU A 305 REMARK 465 LEU A 306 REMARK 465 ALA A 307 REMARK 465 SER A 308 REMARK 465 THR A 309 REMARK 465 ALA A 310 REMARK 465 ASN A 311 REMARK 465 MET A 312 REMARK 465 LEU A 313 REMARK 465 ARG A 314 REMARK 465 GLU A 315 REMARK 465 GLN A 316 REMARK 465 VAL A 317 REMARK 465 ALA A 318 REMARK 465 GLN A 319 REMARK 465 LEU A 320 REMARK 465 LYS A 321 REMARK 465 GLN A 322 REMARK 465 LYS A 323 REMARK 465 VAL A 324 REMARK 465 MET A 325 REMARK 465 ASN A 326 REMARK 465 HIS A 327 REMARK 465 GLY A 328 REMARK 465 SER A 329 REMARK 465 GLY A 330 REMARK 465 LEU A 331 REMARK 465 ASN A 332 REMARK 465 ASP A 333 REMARK 465 ILE A 334 REMARK 465 PHE A 335 REMARK 465 GLU A 336 REMARK 465 ALA A 337 REMARK 465 GLN A 338 REMARK 465 LYS A 339 REMARK 465 ILE A 340 REMARK 465 GLU A 341 REMARK 465 TRP A 342 REMARK 465 HIS A 343 REMARK 465 GLU A 344 REMARK 465 HIS A 345 REMARK 465 HIS A 346 REMARK 465 HIS A 347 REMARK 465 HIS A 348 REMARK 465 HIS A 349 REMARK 465 HIS A 350 REMARK 465 MET B 99 REMARK 465 MET C 4 REMARK 465 GLN C 5 REMARK 465 ASN C 108 REMARK 465 GLY C 198 REMARK 465 PRO C 199 REMARK 465 GLY C 200 REMARK 465 ARG C 201 REMARK 465 VAL C 252 REMARK 465 ALA C 253 REMARK 465 GLY C 254 REMARK 465 GLU C 255 REMARK 465 GLY C 278 REMARK 465 SER C 279 REMARK 465 LEU C 280 REMARK 465 VAL C 281 REMARK 465 PRO C 282 REMARK 465 ARG C 283 REMARK 465 GLY C 284 REMARK 465 SER C 285 REMARK 465 GLY C 286 REMARK 465 SER C 287 REMARK 465 ARG C 288 REMARK 465 ILE C 289 REMARK 465 ALA C 290 REMARK 465 ARG C 291 REMARK 465 LEU C 292 REMARK 465 GLU C 293 REMARK 465 GLU C 294 REMARK 465 LYS C 295 REMARK 465 VAL C 296 REMARK 465 LYS C 297 REMARK 465 THR C 298 REMARK 465 LEU C 299 REMARK 465 LYS C 300 REMARK 465 ALA C 301 REMARK 465 GLN C 302 REMARK 465 ASN C 303 REMARK 465 SER C 304 REMARK 465 GLU C 305 REMARK 465 LEU C 306 REMARK 465 ALA C 307 REMARK 465 SER C 308 REMARK 465 THR C 309 REMARK 465 ALA C 310 REMARK 465 ASN C 311 REMARK 465 MET C 312 REMARK 465 LEU C 313 REMARK 465 ARG C 314 REMARK 465 GLU C 315 REMARK 465 GLN C 316 REMARK 465 VAL C 317 REMARK 465 ALA C 318 REMARK 465 GLN C 319 REMARK 465 LEU C 320 REMARK 465 LYS C 321 REMARK 465 GLN C 322 REMARK 465 LYS C 323 REMARK 465 VAL C 324 REMARK 465 MET C 325 REMARK 465 ASN C 326 REMARK 465 HIS C 327 REMARK 465 GLY C 328 REMARK 465 SER C 329 REMARK 465 GLY C 330 REMARK 465 LEU C 331 REMARK 465 ASN C 332 REMARK 465 ASP C 333 REMARK 465 ILE C 334 REMARK 465 PHE C 335 REMARK 465 GLU C 336 REMARK 465 ALA C 337 REMARK 465 GLN C 338 REMARK 465 LYS C 339 REMARK 465 ILE C 340 REMARK 465 GLU C 341 REMARK 465 TRP C 342 REMARK 465 HIS C 343 REMARK 465 GLU C 344 REMARK 465 HIS C 345 REMARK 465 HIS C 346 REMARK 465 HIS C 347 REMARK 465 HIS C 348 REMARK 465 HIS C 349 REMARK 465 HIS C 350 REMARK 465 MET D 0 REMARK 465 LYS D 75 REMARK 465 ASP D 98 REMARK 465 MET D 99 REMARK 465 SER E 118 REMARK 465 SER F 118 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 5 CG CD OE1 NE2 REMARK 470 ARG A 6 NE CZ NH1 NH2 REMARK 470 GLN A 61 CG CD OE1 NE2 REMARK 470 ARG A 89 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 178 CG CD CE NZ REMARK 470 LYS A 182 CD CE NZ REMARK 470 LYS B 19 CG CD CE NZ REMARK 470 ASP B 34 CG OD1 OD2 REMARK 470 GLU B 44 CG CD OE1 OE2 REMARK 470 GLU B 74 CG CD OE1 OE2 REMARK 470 LYS B 75 CG CD CE NZ REMARK 470 ARG C 6 NE CZ NH1 NH2 REMARK 470 ARG C 48 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 79 CD NE CZ NH1 NH2 REMARK 470 LYS C 121 CE NZ REMARK 470 LYS C 178 CG CD CE NZ REMARK 470 LYS C 182 CG CD CE NZ REMARK 470 LYS C 183 CG CD CE NZ REMARK 470 LYS C 186 CG CD CE NZ REMARK 470 LYS C 188 CD CE NZ REMARK 470 ARG C 193 CG CD NE CZ NH1 NH2 REMARK 470 LEU C 202 CG CD1 CD2 REMARK 470 LEU C 203 CG CD1 CD2 REMARK 470 LYS C 219 CG CD CE NZ REMARK 470 ARG C 222 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 224 CG CD OE1 OE2 REMARK 470 GLN C 225 CG CD OE1 NE2 REMARK 470 GLN C 228 CG CD OE1 NE2 REMARK 470 GLN C 271 CG CD OE1 NE2 REMARK 470 GLN D 2 CG CD OE1 NE2 REMARK 470 GLU D 16 CG CD OE1 OE2 REMARK 470 LYS D 19 CG CD CE NZ REMARK 470 GLU D 36 CG CD OE1 OE2 REMARK 470 GLU D 44 CG CD OE1 OE2 REMARK 470 LYS D 48 CG CD CE NZ REMARK 470 LYS D 58 CG CD CE NZ REMARK 470 THR D 73 OG1 CG2 REMARK 470 GLU D 74 CG CD OE1 OE2 REMARK 470 ARG D 81 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 89 CG CD OE1 NE2 REMARK 470 LYS D 91 CD CE NZ REMARK 470 ARG D 97 NE CZ NH1 NH2 REMARK 470 GLN E 1 CG CD OE1 NE2 REMARK 470 GLN F 3 CG CD OE1 NE2 REMARK 470 GLN F 13 CG CD OE1 NE2 REMARK 470 ILE F 28 CG1 CG2 CD1 REMARK 470 PHE F 29 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS F 64 CG CD CE NZ REMARK 470 LYS F 86 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN C 61 O HOH C 501 1.98 REMARK 500 OH TYR B 67 O6 BGC B 102 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU C 191 CB - CG - CD1 ANGL. DEV. = -12.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 20 -165.71 -163.27 REMARK 500 SER A 110 137.18 -174.24 REMARK 500 ASP A 151 77.93 -104.03 REMARK 500 TRP B 60 -2.12 74.82 REMARK 500 ARG B 97 3.11 -69.30 REMARK 500 ASN C 20 -166.02 -163.32 REMARK 500 SER C 110 142.23 -173.54 REMARK 500 PRO D 32 -168.57 -79.54 REMARK 500 TRP D 60 -1.74 73.87 REMARK 500 REMARK 500 REMARK: NULL DBREF 6V7Z A 5 278 UNP P15813 CD1D_HUMAN 23 296 DBREF 6V7Z A 279 350 PDB 6V7Z 6V7Z 279 350 DBREF 6V7Z B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 6V7Z C 5 278 UNP P15813 CD1D_HUMAN 23 296 DBREF 6V7Z C 279 350 PDB 6V7Z 6V7Z 279 350 DBREF 6V7Z D 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 6V7Z E 1 118 PDB 6V7Z 6V7Z 1 118 DBREF 6V7Z F 1 118 PDB 6V7Z 6V7Z 1 118 SEQADV 6V7Z MET A 4 UNP P15813 INITIATING METHIONINE SEQADV 6V7Z MET B 0 UNP P61769 INITIATING METHIONINE SEQADV 6V7Z MET C 4 UNP P15813 INITIATING METHIONINE SEQADV 6V7Z MET D 0 UNP P61769 INITIATING METHIONINE SEQRES 1 A 347 MET GLN ARG LEU PHE PRO LEU ARG CYS LEU GLN ILE SER SEQRES 2 A 347 SER PHE ALA ASN SER SER TRP THR ARG THR ASP GLY LEU SEQRES 3 A 347 ALA TRP LEU GLY GLU LEU GLN THR HIS SER TRP SER ASN SEQRES 4 A 347 ASP SER ASP THR VAL ARG SER LEU LYS PRO TRP SER GLN SEQRES 5 A 347 GLY THR PHE SER ASP GLN GLN TRP GLU THR LEU GLN HIS SEQRES 6 A 347 ILE PHE ARG VAL TYR ARG SER SER PHE THR ARG ASP VAL SEQRES 7 A 347 LYS GLU PHE ALA LYS MET LEU ARG LEU SER TYR PRO LEU SEQRES 8 A 347 GLU LEU GLN VAL SER ALA GLY CYS GLU VAL HIS PRO GLY SEQRES 9 A 347 ASN ALA SER ASN ASN PHE PHE HIS VAL ALA PHE GLN GLY SEQRES 10 A 347 LYS ASP ILE LEU SER PHE GLN GLY THR SER TRP GLU PRO SEQRES 11 A 347 THR GLN GLU ALA PRO LEU TRP VAL ASN LEU ALA ILE GLN SEQRES 12 A 347 VAL LEU ASN GLN ASP LYS TRP THR ARG GLU THR VAL GLN SEQRES 13 A 347 TRP LEU LEU ASN GLY THR CYS PRO GLN PHE VAL SER GLY SEQRES 14 A 347 LEU LEU GLU SER GLY LYS SER GLU LEU LYS LYS GLN VAL SEQRES 15 A 347 LYS PRO LYS ALA TRP LEU SER ARG GLY PRO SER PRO GLY SEQRES 16 A 347 PRO GLY ARG LEU LEU LEU VAL CYS HIS VAL SER GLY PHE SEQRES 17 A 347 TYR PRO LYS PRO VAL TRP VAL LYS TRP MET ARG GLY GLU SEQRES 18 A 347 GLN GLU GLN GLN GLY THR GLN PRO GLY ASP ILE LEU PRO SEQRES 19 A 347 ASN ALA ASP GLU THR TRP TYR LEU ARG ALA THR LEU ASP SEQRES 20 A 347 VAL VAL ALA GLY GLU ALA ALA GLY LEU SER CYS ARG VAL SEQRES 21 A 347 LYS HIS SER SER LEU GLU GLY GLN ASP ILE VAL LEU TYR SEQRES 22 A 347 TRP GLY SER LEU VAL PRO ARG GLY SER GLY SER ARG ILE SEQRES 23 A 347 ALA ARG LEU GLU GLU LYS VAL LYS THR LEU LYS ALA GLN SEQRES 24 A 347 ASN SER GLU LEU ALA SER THR ALA ASN MET LEU ARG GLU SEQRES 25 A 347 GLN VAL ALA GLN LEU LYS GLN LYS VAL MET ASN HIS GLY SEQRES 26 A 347 SER GLY LEU ASN ASP ILE PHE GLU ALA GLN LYS ILE GLU SEQRES 27 A 347 TRP HIS GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 B 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 B 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 B 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 B 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 B 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 B 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 B 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 347 MET GLN ARG LEU PHE PRO LEU ARG CYS LEU GLN ILE SER SEQRES 2 C 347 SER PHE ALA ASN SER SER TRP THR ARG THR ASP GLY LEU SEQRES 3 C 347 ALA TRP LEU GLY GLU LEU GLN THR HIS SER TRP SER ASN SEQRES 4 C 347 ASP SER ASP THR VAL ARG SER LEU LYS PRO TRP SER GLN SEQRES 5 C 347 GLY THR PHE SER ASP GLN GLN TRP GLU THR LEU GLN HIS SEQRES 6 C 347 ILE PHE ARG VAL TYR ARG SER SER PHE THR ARG ASP VAL SEQRES 7 C 347 LYS GLU PHE ALA LYS MET LEU ARG LEU SER TYR PRO LEU SEQRES 8 C 347 GLU LEU GLN VAL SER ALA GLY CYS GLU VAL HIS PRO GLY SEQRES 9 C 347 ASN ALA SER ASN ASN PHE PHE HIS VAL ALA PHE GLN GLY SEQRES 10 C 347 LYS ASP ILE LEU SER PHE GLN GLY THR SER TRP GLU PRO SEQRES 11 C 347 THR GLN GLU ALA PRO LEU TRP VAL ASN LEU ALA ILE GLN SEQRES 12 C 347 VAL LEU ASN GLN ASP LYS TRP THR ARG GLU THR VAL GLN SEQRES 13 C 347 TRP LEU LEU ASN GLY THR CYS PRO GLN PHE VAL SER GLY SEQRES 14 C 347 LEU LEU GLU SER GLY LYS SER GLU LEU LYS LYS GLN VAL SEQRES 15 C 347 LYS PRO LYS ALA TRP LEU SER ARG GLY PRO SER PRO GLY SEQRES 16 C 347 PRO GLY ARG LEU LEU LEU VAL CYS HIS VAL SER GLY PHE SEQRES 17 C 347 TYR PRO LYS PRO VAL TRP VAL LYS TRP MET ARG GLY GLU SEQRES 18 C 347 GLN GLU GLN GLN GLY THR GLN PRO GLY ASP ILE LEU PRO SEQRES 19 C 347 ASN ALA ASP GLU THR TRP TYR LEU ARG ALA THR LEU ASP SEQRES 20 C 347 VAL VAL ALA GLY GLU ALA ALA GLY LEU SER CYS ARG VAL SEQRES 21 C 347 LYS HIS SER SER LEU GLU GLY GLN ASP ILE VAL LEU TYR SEQRES 22 C 347 TRP GLY SER LEU VAL PRO ARG GLY SER GLY SER ARG ILE SEQRES 23 C 347 ALA ARG LEU GLU GLU LYS VAL LYS THR LEU LYS ALA GLN SEQRES 24 C 347 ASN SER GLU LEU ALA SER THR ALA ASN MET LEU ARG GLU SEQRES 25 C 347 GLN VAL ALA GLN LEU LYS GLN LYS VAL MET ASN HIS GLY SEQRES 26 C 347 SER GLY LEU ASN ASP ILE PHE GLU ALA GLN LYS ILE GLU SEQRES 27 C 347 TRP HIS GLU HIS HIS HIS HIS HIS HIS SEQRES 1 D 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 D 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 D 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 D 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 D 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 D 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 D 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 D 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 E 118 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 E 118 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 E 118 SER ILE PHE SER ILE ASN ALA MET GLY TRP TYR ARG GLN SEQRES 4 E 118 ALA PRO GLY LYS GLN ARG ASP PHE LEU ALA VAL ILE SER SEQRES 5 E 118 SER SER GLY SER THR ASN TYR ALA ASP SER VAL LYS GLY SEQRES 6 E 118 ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR ALA SEQRES 7 E 118 TYR LEU GLN MET ASN SER LEU LYS VAL GLU ASP THR ALA SEQRES 8 E 118 VAL TYR TYR CYS ALA ALA HIS VAL ALA GLY PHE ASP GLU SEQRES 9 E 118 TYR ASN TYR TRP GLY GLN GLY THR GLN VAL THR VAL SER SEQRES 10 E 118 SER SEQRES 1 F 118 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 F 118 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 F 118 SER ILE PHE SER ILE ASN ALA MET GLY TRP TYR ARG GLN SEQRES 4 F 118 ALA PRO GLY LYS GLN ARG ASP PHE LEU ALA VAL ILE SER SEQRES 5 F 118 SER SER GLY SER THR ASN TYR ALA ASP SER VAL LYS GLY SEQRES 6 F 118 ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR ALA SEQRES 7 F 118 TYR LEU GLN MET ASN SER LEU LYS VAL GLU ASP THR ALA SEQRES 8 F 118 VAL TYR TYR CYS ALA ALA HIS VAL ALA GLY PHE ASP GLU SEQRES 9 F 118 TYR ASN TYR TRP GLY GLN GLY THR GLN VAL THR VAL SER SEQRES 10 F 118 SER HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET BMA H 2 11 HET NAG I 1 14 HET NAG I 2 14 HET BMA I 3 11 HET NAG J 1 14 HET NAG J 2 14 HET NAG A 401 14 HET AGH A 402 60 HET PEG A 403 7 HET PEG A 404 7 HET CL A 405 1 HET SO4 B 101 5 HET BGC B 102 12 HET AGH C 401 60 HET NA D 101 1 HET PEG E 201 7 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM AGH N-{(1S,2R,3S)-1-[(ALPHA-D-GALACTOPYRANOSYLOXY)METHYL]- HETNAM 2 AGH 2,3-DIHYDROXYHEPTADECYL}HEXACOSANAMIDE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM NA SODIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 7 NAG 8(C8 H15 N O6) FORMUL 8 BMA 2(C6 H12 O6) FORMUL 12 AGH 2(C50 H99 N O9) FORMUL 13 PEG 3(C4 H10 O3) FORMUL 15 CL CL 1- FORMUL 16 SO4 O4 S 2- FORMUL 17 BGC C6 H12 O6 FORMUL 19 NA NA 1+ FORMUL 21 HOH *64(H2 O) HELIX 1 AA1 SER A 59 ARG A 89 1 31 HELIX 2 AA2 TRP A 140 ASN A 149 1 10 HELIX 3 AA3 ASP A 151 GLY A 164 1 14 HELIX 4 AA4 GLY A 164 GLY A 177 1 14 HELIX 5 AA5 GLY A 177 LYS A 183 1 7 HELIX 6 AA6 GLY A 254 ALA A 257 5 4 HELIX 7 AA7 SER A 267 GLU A 269 5 3 HELIX 8 AA8 SER C 59 LEU C 88 1 30 HELIX 9 AA9 LEU C 139 ASN C 149 1 11 HELIX 10 AB1 ASP C 151 GLY C 164 1 14 HELIX 11 AB2 GLY C 164 GLY C 177 1 14 HELIX 12 AB3 GLY C 177 LYS C 182 1 6 HELIX 13 AB4 ASP E 61 LYS E 64 5 4 HELIX 14 AB5 LYS E 86 THR E 90 5 5 HELIX 15 AB6 LYS F 86 THR F 90 5 5 SHEET 1 AA1 8 ARG A 48 SER A 49 0 SHEET 2 AA1 8 LEU A 35 TRP A 40 -1 N SER A 39 O ARG A 48 SHEET 3 AA1 8 THR A 24 LEU A 32 -1 N GLY A 28 O TRP A 40 SHEET 4 AA1 8 LEU A 10 PHE A 18 -1 N ILE A 15 O ASP A 27 SHEET 5 AA1 8 LEU A 94 VAL A 104 -1 O ALA A 100 N CYS A 12 SHEET 6 AA1 8 SER A 110 PHE A 118 -1 O ALA A 117 N GLN A 97 SHEET 7 AA1 8 LYS A 121 GLN A 127 -1 O LYS A 121 N PHE A 118 SHEET 8 AA1 8 SER A 130 PRO A 133 -1 O GLU A 132 N SER A 125 SHEET 1 AA2 4 LYS A 188 ARG A 193 0 SHEET 2 AA2 4 ARG A 201 PHE A 211 -1 O SER A 209 N LYS A 188 SHEET 3 AA2 4 TRP A 243 VAL A 252 -1 O LEU A 245 N VAL A 208 SHEET 4 AA2 4 GLN A 231 PRO A 232 -1 N GLN A 231 O THR A 248 SHEET 1 AA3 4 LYS A 188 ARG A 193 0 SHEET 2 AA3 4 ARG A 201 PHE A 211 -1 O SER A 209 N LYS A 188 SHEET 3 AA3 4 TRP A 243 VAL A 252 -1 O LEU A 245 N VAL A 208 SHEET 4 AA3 4 LEU A 236 PRO A 237 -1 N LEU A 236 O TYR A 244 SHEET 1 AA4 4 GLN A 225 GLU A 226 0 SHEET 2 AA4 4 VAL A 216 ARG A 222 -1 N ARG A 222 O GLN A 225 SHEET 3 AA4 4 SER A 260 HIS A 265 -1 O SER A 260 N MET A 221 SHEET 4 AA4 4 ILE A 273 TYR A 276 -1 O ILE A 273 N VAL A 263 SHEET 1 AA5 4 LYS B 6 SER B 11 0 SHEET 2 AA5 4 ASN B 21 PHE B 30 -1 O SER B 28 N LYS B 6 SHEET 3 AA5 4 PHE B 62 PHE B 70 -1 O THR B 68 N LEU B 23 SHEET 4 AA5 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 AA6 4 LYS B 6 SER B 11 0 SHEET 2 AA6 4 ASN B 21 PHE B 30 -1 O SER B 28 N LYS B 6 SHEET 3 AA6 4 PHE B 62 PHE B 70 -1 O THR B 68 N LEU B 23 SHEET 4 AA6 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 AA7 4 GLU B 44 ARG B 45 0 SHEET 2 AA7 4 GLU B 36 LYS B 41 -1 N LYS B 41 O GLU B 44 SHEET 3 AA7 4 TYR B 78 ASN B 83 -1 O ARG B 81 N ASP B 38 SHEET 4 AA7 4 LYS B 91 LYS B 94 -1 O LYS B 91 N VAL B 82 SHEET 1 AA8 8 ARG C 48 SER C 49 0 SHEET 2 AA8 8 LEU C 35 TRP C 40 -1 N SER C 39 O ARG C 48 SHEET 3 AA8 8 THR C 24 LEU C 32 -1 N GLY C 28 O TRP C 40 SHEET 4 AA8 8 LEU C 10 PHE C 18 -1 N SER C 17 O ARG C 25 SHEET 5 AA8 8 LEU C 94 VAL C 104 -1 O ALA C 100 N CYS C 12 SHEET 6 AA8 8 SER C 110 PHE C 118 -1 O ALA C 117 N GLN C 97 SHEET 7 AA8 8 LYS C 121 GLN C 127 -1 O LEU C 124 N VAL C 116 SHEET 8 AA8 8 SER C 130 PRO C 133 -1 O GLU C 132 N SER C 125 SHEET 1 AA9 4 LYS C 188 GLY C 194 0 SHEET 2 AA9 4 LEU C 203 PHE C 211 -1 O LEU C 203 N GLY C 194 SHEET 3 AA9 4 TRP C 243 ASP C 250 -1 O LEU C 249 N LEU C 204 SHEET 4 AA9 4 GLN C 231 PRO C 232 -1 N GLN C 231 O THR C 248 SHEET 1 AB1 4 LYS C 188 GLY C 194 0 SHEET 2 AB1 4 LEU C 203 PHE C 211 -1 O LEU C 203 N GLY C 194 SHEET 3 AB1 4 TRP C 243 ASP C 250 -1 O LEU C 249 N LEU C 204 SHEET 4 AB1 4 LEU C 236 PRO C 237 -1 N LEU C 236 O TYR C 244 SHEET 1 AB2 4 GLN C 225 GLU C 226 0 SHEET 2 AB2 4 VAL C 216 ARG C 222 -1 N ARG C 222 O GLN C 225 SHEET 3 AB2 4 SER C 260 HIS C 265 -1 O SER C 260 N MET C 221 SHEET 4 AB2 4 ILE C 273 TYR C 276 -1 O LEU C 275 N CYS C 261 SHEET 1 AB3 4 LYS D 6 SER D 11 0 SHEET 2 AB3 4 ASN D 21 PHE D 30 -1 O ASN D 24 N TYR D 10 SHEET 3 AB3 4 PHE D 62 PHE D 70 -1 O PHE D 70 N ASN D 21 SHEET 4 AB3 4 GLU D 50 HIS D 51 -1 N GLU D 50 O TYR D 67 SHEET 1 AB4 4 LYS D 6 SER D 11 0 SHEET 2 AB4 4 ASN D 21 PHE D 30 -1 O ASN D 24 N TYR D 10 SHEET 3 AB4 4 PHE D 62 PHE D 70 -1 O PHE D 70 N ASN D 21 SHEET 4 AB4 4 SER D 55 PHE D 56 -1 N SER D 55 O TYR D 63 SHEET 1 AB5 4 GLU D 44 ARG D 45 0 SHEET 2 AB5 4 GLU D 36 LYS D 41 -1 N LYS D 41 O GLU D 44 SHEET 3 AB5 4 TYR D 78 ASN D 83 -1 O ALA D 79 N LEU D 40 SHEET 4 AB5 4 LYS D 91 LYS D 94 -1 O LYS D 91 N VAL D 82 SHEET 1 AB6 4 VAL E 5 SER E 7 0 SHEET 2 AB6 4 LEU E 18 ALA E 23 -1 O ALA E 23 N VAL E 5 SHEET 3 AB6 4 THR E 77 MET E 82 -1 O MET E 82 N LEU E 18 SHEET 4 AB6 4 PHE E 67 ASP E 72 -1 N THR E 68 O GLN E 81 SHEET 1 AB7 6 GLY E 10 VAL E 12 0 SHEET 2 AB7 6 THR E 112 VAL E 116 1 O THR E 115 N GLY E 10 SHEET 3 AB7 6 ALA E 91 VAL E 99 -1 N TYR E 93 O THR E 112 SHEET 4 AB7 6 ILE E 31 GLN E 39 -1 N TYR E 37 O TYR E 94 SHEET 5 AB7 6 ASP E 46 SER E 52 -1 O ASP E 46 N ARG E 38 SHEET 6 AB7 6 THR E 57 TYR E 59 -1 O ASN E 58 N VAL E 50 SHEET 1 AB8 4 GLY E 10 VAL E 12 0 SHEET 2 AB8 4 THR E 112 VAL E 116 1 O THR E 115 N GLY E 10 SHEET 3 AB8 4 ALA E 91 VAL E 99 -1 N TYR E 93 O THR E 112 SHEET 4 AB8 4 PHE E 102 TRP E 108 -1 O PHE E 102 N VAL E 99 SHEET 1 AB9 4 GLN F 3 SER F 7 0 SHEET 2 AB9 4 LEU F 18 SER F 25 -1 O ALA F 23 N VAL F 5 SHEET 3 AB9 4 THR F 77 MET F 82 -1 O MET F 82 N LEU F 18 SHEET 4 AB9 4 PHE F 67 ASP F 72 -1 N SER F 70 O TYR F 79 SHEET 1 AC1 6 GLY F 10 GLN F 13 0 SHEET 2 AC1 6 THR F 112 SER F 117 1 O THR F 115 N GLY F 10 SHEET 3 AC1 6 ALA F 91 VAL F 99 -1 N TYR F 93 O THR F 112 SHEET 4 AC1 6 ILE F 31 GLN F 39 -1 N ASN F 32 O HIS F 98 SHEET 5 AC1 6 ARG F 45 SER F 52 -1 O ASP F 46 N ARG F 38 SHEET 6 AC1 6 THR F 57 TYR F 59 -1 O ASN F 58 N VAL F 50 SHEET 1 AC2 4 GLY F 10 GLN F 13 0 SHEET 2 AC2 4 THR F 112 SER F 117 1 O THR F 115 N GLY F 10 SHEET 3 AC2 4 ALA F 91 VAL F 99 -1 N TYR F 93 O THR F 112 SHEET 4 AC2 4 TYR F 107 TRP F 108 -1 O TYR F 107 N ALA F 97 SSBOND 1 CYS A 102 CYS A 166 1555 1555 2.09 SSBOND 2 CYS A 206 CYS A 261 1555 1555 2.02 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.04 SSBOND 4 CYS C 102 CYS C 166 1555 1555 2.10 SSBOND 5 CYS C 206 CYS C 261 1555 1555 2.04 SSBOND 6 CYS D 25 CYS D 80 1555 1555 2.05 SSBOND 7 CYS E 22 CYS E 95 1555 1555 2.03 SSBOND 8 CYS F 22 CYS F 95 1555 1555 2.05 LINK ND2 ASN A 20 C1 NAG G 1 1555 1555 1.46 LINK ND2 ASN A 42 C1 NAG H 1 1555 1555 1.46 LINK ND2 ASN A 163 C1 NAG A 401 1555 1555 1.44 LINK ND2 ASN C 20 C1 NAG I 1 1555 1555 1.46 LINK ND2 ASN C 42 C1 NAG J 1 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG H 1 C1 BMA H 2 1555 1555 1.44 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.45 LINK O4 NAG I 2 C1 BMA I 3 1555 1555 1.46 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.46 CISPEP 1 TYR A 92 PRO A 93 0 -0.96 CISPEP 2 TYR A 212 PRO A 213 0 6.15 CISPEP 3 HIS B 31 PRO B 32 0 5.06 CISPEP 4 TYR C 92 PRO C 93 0 -1.04 CISPEP 5 TYR C 212 PRO C 213 0 5.20 CISPEP 6 HIS D 31 PRO D 32 0 3.05 CRYST1 67.717 121.933 172.136 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014767 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008201 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005809 0.00000