HEADER SIGNALING PROTEIN 13-DEC-19 6V9L TITLE EXPANDING THE CHEMICAL LANDSCAPE OF SOS1 ACTIVATORS USING FRAGMENT TITLE 2 BASED METHODS COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE HRAS; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: H-RAS-1,HA-RAS,TRANSFORMING PROTEIN P21,C-H-RAS,P21RAS; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SON OF SEVENLESS HOMOLOG 1; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: SOS-1; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: GTPASE HRAS; COMPND 14 CHAIN: C; COMPND 15 SYNONYM: H-RAS-1,HA-RAS,TRANSFORMING PROTEIN P21,C-H-RAS,P21RAS; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HRAS, HRAS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: SOS1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: HRAS, HRAS1; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RAS, SOS, INHIBITOR, ONCOPROTEIN, PROTEIN-PROTEIN COMPLEX, MAPK, KEYWDS 2 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.PHAN,S.W.FESIK REVDAT 4 23-OCT-24 6V9L 1 REMARK REVDAT 3 15-NOV-23 6V9L 1 REMARK REVDAT 2 11-OCT-23 6V9L 1 REMARK REVDAT 1 26-AUG-20 6V9L 0 JRNL AUTH D.SARKAR,E.T.OLEJNICZAK,J.PHAN,J.A.COKER,J.SAI,A.ARNOLD, JRNL AUTH 2 Y.BEESETTY,A.G.WATERSON,S.W.FESIK JRNL TITL DISCOVERY OF SULFONAMIDE-DERIVED AGONISTS OF SOS1-MEDIATED JRNL TITL 2 NUCLEOTIDE EXCHANGE ON RAS USING FRAGMENT-BASED METHODS. JRNL REF J.MED.CHEM. V. 63 8325 2020 JRNL REFN ISSN 0022-2623 JRNL PMID 32673492 JRNL DOI 10.1021/ACS.JMEDCHEM.0C00511 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 164968 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.176 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.220 REMARK 3 FREE R VALUE TEST SET COUNT : 2015 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 4.9347 - 4.0912 1.00 12137 152 0.1475 0.1722 REMARK 3 2 4.0912 - 3.2477 1.00 11800 148 0.1372 0.1436 REMARK 3 3 3.2477 - 2.8373 1.00 11712 143 0.1571 0.1677 REMARK 3 4 2.8373 - 2.5779 1.00 11635 143 0.1656 0.1765 REMARK 3 5 2.5779 - 2.3931 1.00 11661 140 0.1606 0.1947 REMARK 3 6 2.3931 - 2.2520 1.00 11618 143 0.1572 0.1816 REMARK 3 7 2.2520 - 2.1393 1.00 11616 148 0.1562 0.1646 REMARK 3 8 2.1393 - 2.0461 1.00 11570 135 0.1616 0.1953 REMARK 3 9 2.0461 - 1.9674 1.00 11558 145 0.1675 0.1880 REMARK 3 10 1.9674 - 1.8995 1.00 11600 143 0.1700 0.2044 REMARK 3 11 1.8995 - 1.8401 1.00 11521 150 0.1733 0.1847 REMARK 3 12 1.8401 - 1.7875 1.00 11541 134 0.1710 0.1710 REMARK 3 13 1.7875 - 1.7404 1.00 11561 146 0.2069 0.2240 REMARK 3 14 1.7404 - 1.6980 0.99 11423 145 0.2296 0.2698 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.8571 45.6802 62.9939 REMARK 3 T TENSOR REMARK 3 T11: 0.1418 T22: 0.1559 REMARK 3 T33: 0.1561 T12: 0.0056 REMARK 3 T13: -0.0075 T23: -0.0272 REMARK 3 L TENSOR REMARK 3 L11: 0.0217 L22: 0.0117 REMARK 3 L33: 0.0188 L12: 0.0146 REMARK 3 L13: 0.0286 L23: 0.0039 REMARK 3 S TENSOR REMARK 3 S11: 0.1043 S12: 0.0109 S13: -0.0433 REMARK 3 S21: 0.0876 S22: 0.0096 S23: 0.0034 REMARK 3 S31: 0.0846 S32: 0.0550 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.7608 51.9001 61.6693 REMARK 3 T TENSOR REMARK 3 T11: 0.1348 T22: 0.1628 REMARK 3 T33: 0.1612 T12: -0.0362 REMARK 3 T13: 0.0125 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 0.0527 L22: 0.0151 REMARK 3 L33: 0.0064 L12: -0.0260 REMARK 3 L13: -0.0114 L23: 0.0015 REMARK 3 S TENSOR REMARK 3 S11: 0.0122 S12: 0.0143 S13: 0.0317 REMARK 3 S21: -0.0382 S22: -0.0197 S23: 0.1449 REMARK 3 S31: 0.0462 S32: -0.1355 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.2220 45.1224 56.3730 REMARK 3 T TENSOR REMARK 3 T11: 0.1516 T22: 0.1827 REMARK 3 T33: 0.1435 T12: -0.0465 REMARK 3 T13: 0.0145 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 0.0412 L22: 0.0199 REMARK 3 L33: 0.0769 L12: 0.0079 REMARK 3 L13: 0.0884 L23: 0.0107 REMARK 3 S TENSOR REMARK 3 S11: 0.0044 S12: -0.1599 S13: 0.0290 REMARK 3 S21: 0.0790 S22: 0.0353 S23: -0.0308 REMARK 3 S31: -0.0566 S32: 0.1275 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 53 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7735 47.1568 72.3189 REMARK 3 T TENSOR REMARK 3 T11: 0.1985 T22: 0.2019 REMARK 3 T33: 0.1616 T12: -0.0497 REMARK 3 T13: 0.0357 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.0406 L22: 0.0123 REMARK 3 L33: 0.0265 L12: -0.0108 REMARK 3 L13: 0.0419 L23: -0.0042 REMARK 3 S TENSOR REMARK 3 S11: 0.0352 S12: -0.0993 S13: -0.1602 REMARK 3 S21: 0.1113 S22: -0.0822 S23: 0.0948 REMARK 3 S31: 0.0542 S32: 0.0072 S33: -0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.9219 44.1500 75.9581 REMARK 3 T TENSOR REMARK 3 T11: 0.4108 T22: 0.2986 REMARK 3 T33: 0.2503 T12: -0.0604 REMARK 3 T13: 0.0109 T23: 0.0441 REMARK 3 L TENSOR REMARK 3 L11: 0.0063 L22: 0.0094 REMARK 3 L33: 0.0043 L12: -0.0033 REMARK 3 L13: -0.0101 L23: -0.0080 REMARK 3 S TENSOR REMARK 3 S11: 0.1496 S12: -0.0604 S13: -0.0116 REMARK 3 S21: -0.0247 S22: 0.0044 S23: 0.0128 REMARK 3 S31: 0.1442 S32: -0.0727 S33: 0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2802 56.8889 68.9149 REMARK 3 T TENSOR REMARK 3 T11: 0.1471 T22: 0.1385 REMARK 3 T33: 0.1559 T12: -0.0147 REMARK 3 T13: 0.0105 T23: -0.0255 REMARK 3 L TENSOR REMARK 3 L11: 0.0249 L22: 0.0238 REMARK 3 L33: 0.0421 L12: 0.0386 REMARK 3 L13: -0.0007 L23: -0.0072 REMARK 3 S TENSOR REMARK 3 S11: 0.0556 S12: -0.0855 S13: 0.0433 REMARK 3 S21: 0.1124 S22: -0.0169 S23: 0.0657 REMARK 3 S31: 0.0017 S32: 0.0817 S33: 0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 87 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.2957 56.5283 78.3843 REMARK 3 T TENSOR REMARK 3 T11: 0.2037 T22: 0.2409 REMARK 3 T33: 0.1282 T12: -0.0510 REMARK 3 T13: 0.0248 T23: -0.0263 REMARK 3 L TENSOR REMARK 3 L11: 0.0088 L22: 0.0195 REMARK 3 L33: 0.0141 L12: -0.0020 REMARK 3 L13: 0.0296 L23: 0.0132 REMARK 3 S TENSOR REMARK 3 S11: 0.0780 S12: -0.3750 S13: 0.1578 REMARK 3 S21: 0.2782 S22: -0.0339 S23: -0.0094 REMARK 3 S31: -0.0438 S32: 0.0108 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 105 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.7583 55.6825 71.0525 REMARK 3 T TENSOR REMARK 3 T11: 0.1515 T22: 0.1869 REMARK 3 T33: 0.1372 T12: -0.0407 REMARK 3 T13: 0.0007 T23: -0.0390 REMARK 3 L TENSOR REMARK 3 L11: 0.0285 L22: 0.0370 REMARK 3 L33: 0.0192 L12: 0.0354 REMARK 3 L13: -0.0242 L23: 0.0078 REMARK 3 S TENSOR REMARK 3 S11: 0.1041 S12: -0.1731 S13: 0.0796 REMARK 3 S21: 0.0608 S22: 0.0244 S23: 0.0504 REMARK 3 S31: -0.0599 S32: 0.0626 S33: -0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 117 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3850 65.9516 65.4675 REMARK 3 T TENSOR REMARK 3 T11: 0.1775 T22: 0.1450 REMARK 3 T33: 0.2040 T12: -0.0273 REMARK 3 T13: 0.0311 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 0.0697 L22: 0.1077 REMARK 3 L33: 0.0714 L12: 0.1426 REMARK 3 L13: -0.0985 L23: -0.0848 REMARK 3 S TENSOR REMARK 3 S11: 0.0728 S12: -0.0090 S13: 0.1745 REMARK 3 S21: -0.0227 S22: -0.0122 S23: 0.0918 REMARK 3 S31: -0.1434 S32: 0.0750 S33: -0.0000 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 152 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.2395 54.0776 60.4094 REMARK 3 T TENSOR REMARK 3 T11: 0.1559 T22: 0.1741 REMARK 3 T33: 0.1402 T12: -0.0530 REMARK 3 T13: 0.0174 T23: -0.0125 REMARK 3 L TENSOR REMARK 3 L11: 0.0229 L22: 0.0032 REMARK 3 L33: 0.0306 L12: -0.0268 REMARK 3 L13: -0.0319 L23: -0.0006 REMARK 3 S TENSOR REMARK 3 S11: 0.0773 S12: 0.0695 S13: 0.0647 REMARK 3 S21: 0.0190 S22: -0.0953 S23: -0.0722 REMARK 3 S31: -0.0677 S32: 0.0882 S33: -0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 565 THROUGH 699 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4156 30.5309 79.5827 REMARK 3 T TENSOR REMARK 3 T11: 0.1442 T22: 0.1464 REMARK 3 T33: 0.1139 T12: -0.0186 REMARK 3 T13: 0.0007 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 0.0810 L22: 0.1702 REMARK 3 L33: 0.2815 L12: -0.1876 REMARK 3 L13: -0.1752 L23: 0.0959 REMARK 3 S TENSOR REMARK 3 S11: -0.0135 S12: -0.0183 S13: 0.0269 REMARK 3 S21: 0.0244 S22: 0.0260 S23: -0.0034 REMARK 3 S31: 0.0136 S32: 0.0897 S33: 0.0000 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 700 THROUGH 818 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3068 40.1146 48.7946 REMARK 3 T TENSOR REMARK 3 T11: 0.1025 T22: 0.1188 REMARK 3 T33: 0.1212 T12: -0.0070 REMARK 3 T13: 0.0029 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 0.1291 L22: -0.0315 REMARK 3 L33: 0.4626 L12: 0.1179 REMARK 3 L13: -0.0914 L23: -0.0572 REMARK 3 S TENSOR REMARK 3 S11: 0.0038 S12: -0.0033 S13: 0.0130 REMARK 3 S21: -0.0125 S22: 0.0006 S23: 0.0336 REMARK 3 S31: -0.0591 S32: -0.0581 S33: 0.0002 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 819 THROUGH 1046 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9672 33.0540 31.8949 REMARK 3 T TENSOR REMARK 3 T11: 0.0734 T22: 0.0794 REMARK 3 T33: 0.0782 T12: -0.0219 REMARK 3 T13: 0.0114 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 0.1944 L22: 0.2457 REMARK 3 L33: 0.7208 L12: 0.0298 REMARK 3 L13: -0.1125 L23: -0.1120 REMARK 3 S TENSOR REMARK 3 S11: -0.0363 S12: 0.0298 S13: 0.0012 REMARK 3 S21: -0.0287 S22: 0.0215 S23: -0.0283 REMARK 3 S31: 0.0230 S32: 0.0504 S33: -0.0045 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 0 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.4750 12.1041 41.5156 REMARK 3 T TENSOR REMARK 3 T11: 0.1244 T22: 0.1250 REMARK 3 T33: 0.2163 T12: 0.0226 REMARK 3 T13: -0.0009 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 0.0044 L22: 0.1163 REMARK 3 L33: 0.0294 L12: -0.0375 REMARK 3 L13: 0.0342 L23: -0.0430 REMARK 3 S TENSOR REMARK 3 S11: -0.1092 S12: 0.0429 S13: 0.1378 REMARK 3 S21: 0.1192 S22: 0.0538 S23: -0.1554 REMARK 3 S31: 0.0207 S32: 0.0051 S33: -0.0000 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 25 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.0627 12.6200 55.5943 REMARK 3 T TENSOR REMARK 3 T11: 0.3375 T22: 0.1102 REMARK 3 T33: 0.5166 T12: 0.0725 REMARK 3 T13: -0.1957 T23: 0.1414 REMARK 3 L TENSOR REMARK 3 L11: 0.0571 L22: 0.0285 REMARK 3 L33: 0.0142 L12: 0.0410 REMARK 3 L13: 0.0289 L23: 0.0110 REMARK 3 S TENSOR REMARK 3 S11: 0.1003 S12: 0.0166 S13: -0.1827 REMARK 3 S21: 0.1104 S22: 0.1172 S23: 0.0178 REMARK 3 S31: 0.2159 S32: 0.0641 S33: 0.0092 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 35 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.9440 14.1569 45.7500 REMARK 3 T TENSOR REMARK 3 T11: 0.2598 T22: 0.2827 REMARK 3 T33: 0.4387 T12: 0.0584 REMARK 3 T13: -0.0978 T23: 0.0257 REMARK 3 L TENSOR REMARK 3 L11: 0.0053 L22: 0.0087 REMARK 3 L33: 0.0144 L12: 0.0171 REMARK 3 L13: -0.0408 L23: -0.0163 REMARK 3 S TENSOR REMARK 3 S11: -0.0252 S12: -0.0726 S13: 0.0019 REMARK 3 S21: 0.0408 S22: -0.1608 S23: -0.1704 REMARK 3 S31: -0.1768 S32: 0.1678 S33: -0.0001 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 49 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.3908 18.9613 36.0016 REMARK 3 T TENSOR REMARK 3 T11: 0.1186 T22: 0.1077 REMARK 3 T33: 0.1866 T12: 0.0045 REMARK 3 T13: 0.0175 T23: 0.0200 REMARK 3 L TENSOR REMARK 3 L11: 0.0218 L22: 0.1316 REMARK 3 L33: 0.0682 L12: 0.0334 REMARK 3 L13: 0.0858 L23: 0.0818 REMARK 3 S TENSOR REMARK 3 S11: -0.0302 S12: -0.0038 S13: -0.0621 REMARK 3 S21: -0.0341 S22: -0.0538 S23: -0.1828 REMARK 3 S31: 0.0029 S32: 0.0113 S33: -0.0047 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 75 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.2758 8.7006 31.4972 REMARK 3 T TENSOR REMARK 3 T11: 0.1420 T22: 0.1194 REMARK 3 T33: 0.1445 T12: 0.0235 REMARK 3 T13: 0.0201 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.0305 L22: 0.2432 REMARK 3 L33: 0.0319 L12: -0.0230 REMARK 3 L13: -0.0551 L23: -0.0195 REMARK 3 S TENSOR REMARK 3 S11: 0.0859 S12: 0.0445 S13: -0.0063 REMARK 3 S21: -0.1438 S22: -0.0366 S23: 0.0367 REMARK 3 S31: 0.0490 S32: 0.0357 S33: 0.0000 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 118 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7861 0.5498 44.3181 REMARK 3 T TENSOR REMARK 3 T11: 0.1575 T22: 0.1645 REMARK 3 T33: 0.3118 T12: -0.0028 REMARK 3 T13: 0.0285 T23: -0.0278 REMARK 3 L TENSOR REMARK 3 L11: 0.0105 L22: 0.0077 REMARK 3 L33: 0.0090 L12: 0.0013 REMARK 3 L13: 0.0019 L23: -0.0051 REMARK 3 S TENSOR REMARK 3 S11: -0.0022 S12: -0.1436 S13: -0.0293 REMARK 3 S21: 0.0944 S22: 0.0493 S23: 0.0220 REMARK 3 S31: 0.0280 S32: -0.0959 S33: 0.0000 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 127 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.3446 0.8710 36.9609 REMARK 3 T TENSOR REMARK 3 T11: 0.1524 T22: 0.1303 REMARK 3 T33: 0.1706 T12: 0.0308 REMARK 3 T13: 0.0130 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 0.0937 L22: 0.3305 REMARK 3 L33: 0.0250 L12: -0.1880 REMARK 3 L13: 0.0437 L23: -0.0500 REMARK 3 S TENSOR REMARK 3 S11: 0.0557 S12: -0.0268 S13: -0.0033 REMARK 3 S21: -0.0690 S22: -0.0659 S23: -0.0878 REMARK 3 S31: 0.1078 S32: 0.0074 S33: 0.0004 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6V9L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-DEC-19. REMARK 100 THE DEPOSITION ID IS D_1000246039. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 164982 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.698 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.80 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.40 REMARK 200 R MERGE FOR SHELL (I) : 0.95100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4NYI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, 2.0 M SODIUM REMARK 280 FORMATE, PH 4.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 91.69150 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 91.69150 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 89.03450 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 91.69150 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 91.69150 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 89.03450 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 91.69150 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 91.69150 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 89.03450 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 91.69150 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 91.69150 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 89.03450 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 91.69150 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 91.69150 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 89.03450 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 91.69150 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 91.69150 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 89.03450 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 91.69150 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 91.69150 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 89.03450 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 91.69150 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 91.69150 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 89.03450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B2800 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ASN B 591 REMARK 465 MET B 592 REMARK 465 GLN B 593 REMARK 465 PRO B 594 REMARK 465 LYS B 595 REMARK 465 ALA B 596 REMARK 465 ARG B 744 REMARK 465 ASP B 745 REMARK 465 ASN B 746 REMARK 465 GLY B 747 REMARK 465 PRO B 748 REMARK 465 GLY B 749 REMARK 465 HIS B 750 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP C 105 O HOH C 301 1.84 REMARK 500 O HOH A 414 O HOH A 465 1.85 REMARK 500 O HOH B 2630 O HOH B 2700 1.87 REMARK 500 O HOH B 2241 O HOH B 2601 1.88 REMARK 500 O HOH A 406 O HOH A 455 1.88 REMARK 500 O HOH B 2300 O HOH B 2382 1.88 REMARK 500 O HOH B 2641 O HOH B 2677 1.91 REMARK 500 O HOH B 2191 O HOH B 2258 1.93 REMARK 500 O HOH C 425 O HOH C 482 1.94 REMARK 500 O HOH B 2225 O HOH B 2619 1.95 REMARK 500 O HOH B 2672 O HOH B 2683 1.95 REMARK 500 ND1 HIS B 951 O HOH B 2101 1.96 REMARK 500 O HOH A 415 O HOH A 445 1.98 REMARK 500 OE1 GLN A 129 O HOH A 301 2.00 REMARK 500 O HOH C 481 O HOH C 489 2.00 REMARK 500 O HOH B 2579 O HOH B 2630 2.02 REMARK 500 O HOH B 2107 O HOH B 2443 2.02 REMARK 500 O HOH C 428 O HOH C 516 2.03 REMARK 500 O HOH B 2797 O HOH B 2801 2.04 REMARK 500 O HOH B 2255 O HOH B 2657 2.04 REMARK 500 OE2 GLU B 954 O HOH B 2102 2.04 REMARK 500 O HOH B 2145 O HOH B 2404 2.05 REMARK 500 O HOH A 456 O HOH A 458 2.05 REMARK 500 O HOH B 2203 O HOH B 2626 2.05 REMARK 500 NH1 ARG C 41 O HOH C 302 2.05 REMARK 500 O HOH A 471 O HOH B 2640 2.05 REMARK 500 O HOH B 2276 O HOH B 2712 2.05 REMARK 500 O HOH B 2712 O HOH B 2729 2.05 REMARK 500 OE1 GLU A 91 O HOH A 302 2.07 REMARK 500 O HOH B 2244 O HOH B 2339 2.09 REMARK 500 O2 FMT C 201 O HOH C 303 2.09 REMARK 500 O HOH B 2516 O HOH B 2581 2.12 REMARK 500 O HOH C 390 O HOH C 428 2.12 REMARK 500 O HOH B 2267 O HOH B 2636 2.12 REMARK 500 O HOH C 310 O HOH C 384 2.13 REMARK 500 O HOH B 2426 O HOH B 2775 2.13 REMARK 500 O HOH B 2116 O HOH B 2560 2.13 REMARK 500 O HOH C 304 O HOH C 430 2.14 REMARK 500 O HOH A 416 O HOH A 448 2.15 REMARK 500 OD1 ASP B 620 O HOH B 2103 2.15 REMARK 500 O HOH B 2575 O HOH B 2610 2.16 REMARK 500 O2 GOL B 2008 O HOH B 2104 2.17 REMARK 500 O HOH C 309 O HOH C 483 2.17 REMARK 500 NH2 ARG C 68 O HOH C 304 2.18 REMARK 500 OE1 GLN B 755 O HOH B 2105 2.18 REMARK 500 O HOH B 2552 O HOH C 505 2.18 REMARK 500 O HOH B 2542 O HOH B 2623 2.19 REMARK 500 OE1 GLU B 906 O HOH B 2106 2.19 REMARK 500 NE2 GLN B 755 O HOH B 2107 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 2368 O HOH C 324 3555 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 36 -64.55 -98.72 REMARK 500 LYS A 117 35.40 70.42 REMARK 500 ARG A 149 -2.98 81.11 REMARK 500 HIS B 764 -115.52 -124.04 REMARK 500 HIS B 770 60.13 -103.06 REMARK 500 ASN C 26 100.32 -43.86 REMARK 500 GLU C 37 115.65 -28.97 REMARK 500 TYR C 40 18.82 -142.54 REMARK 500 ASP C 119 -169.23 -164.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN C 25 ASN C 26 143.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 THR A 35 OG1 82.8 REMARK 620 3 GNP A 201 O2G 171.3 88.8 REMARK 620 4 GNP A 201 O2B 93.1 174.8 95.5 REMARK 620 5 HOH A 325 O 86.2 91.2 92.2 91.7 REMARK 620 6 HOH A 365 O 89.0 87.0 92.3 89.8 175.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 202 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR C 87 OG1 REMARK 620 2 THR C 124 OG1 96.7 REMARK 620 3 HOH C 467 O 66.3 90.7 REMARK 620 4 HOH C 475 O 119.1 136.4 124.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QTJ B 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 2007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 2008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA C 202 DBREF 6V9L A 1 166 UNP P01112 RASH_HUMAN 1 166 DBREF 6V9L B 566 1046 UNP Q07889 SOS1_HUMAN 566 1046 DBREF 6V9L C 1 166 UNP P01112 RASH_HUMAN 1 166 SEQADV 6V9L GLY A 0 UNP P01112 EXPRESSION TAG SEQADV 6V9L ALA A 64 UNP P01112 TYR 64 CONFLICT SEQADV 6V9L GLY B 565 UNP Q07889 EXPRESSION TAG SEQADV 6V9L GLY C 0 UNP P01112 EXPRESSION TAG SEQRES 1 A 167 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY SEQRES 2 A 167 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 A 167 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 A 167 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CSO SEQRES 5 A 167 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU ALA SEQRES 6 A 167 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 A 167 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 A 167 GLU ASP ILE HIS GLN TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 A 167 LYS ASP SER ASP ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 A 167 LYS CYS ASP LEU ALA ALA ARG THR VAL GLU SER ARG GLN SEQRES 11 A 167 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO TYR ILE SEQRES 12 A 167 GLU THR SER ALA LYS THR ARG GLN GLY VAL GLU ASP ALA SEQRES 13 A 167 PHE TYR THR LEU VAL ARG GLU ILE ARG GLN HIS SEQRES 1 B 482 GLY GLN MET ARG LEU PRO SER ALA ASP VAL TYR ARG PHE SEQRES 2 B 482 ALA GLU PRO ASP SER GLU GLU ASN ILE ILE PHE GLU GLU SEQRES 3 B 482 ASN MET GLN PRO LYS ALA GLY ILE PRO ILE ILE LYS ALA SEQRES 4 B 482 GLY THR VAL ILE LYS LEU ILE GLU ARG LEU THR TYR HIS SEQRES 5 B 482 MET TYR ALA ASP PRO ASN PHE VAL ARG THR PHE LEU THR SEQRES 6 B 482 THR TYR ARG SER PHE CYS LYS PRO GLN GLU LEU LEU SER SEQRES 7 B 482 LEU ILE ILE GLU ARG PHE GLU ILE PRO GLU PRO GLU PRO SEQRES 8 B 482 THR GLU ALA ASP ARG ILE ALA ILE GLU ASN GLY ASP GLN SEQRES 9 B 482 PRO LEU SER ALA GLU LEU LYS ARG PHE ARG LYS GLU TYR SEQRES 10 B 482 ILE GLN PRO VAL GLN LEU ARG VAL LEU ASN VAL CYS ARG SEQRES 11 B 482 HIS TRP VAL GLU HIS HIS PHE TYR ASP PHE GLU ARG ASP SEQRES 12 B 482 ALA TYR LEU LEU GLN ARG MET GLU GLU PHE ILE GLY THR SEQRES 13 B 482 VAL ARG GLY LYS ALA MET LYS LYS TRP VAL GLU SER ILE SEQRES 14 B 482 THR LYS ILE ILE GLN ARG LYS LYS ILE ALA ARG ASP ASN SEQRES 15 B 482 GLY PRO GLY HIS ASN ILE THR PHE GLN SER SER PRO PRO SEQRES 16 B 482 THR VAL GLU TRP HIS ILE SER ARG PRO GLY HIS ILE GLU SEQRES 17 B 482 THR PHE ASP LEU LEU THR LEU HIS PRO ILE GLU ILE ALA SEQRES 18 B 482 ARG GLN LEU THR LEU LEU GLU SER ASP LEU TYR ARG ALA SEQRES 19 B 482 VAL GLN PRO SER GLU LEU VAL GLY SER VAL TRP THR LYS SEQRES 20 B 482 GLU ASP LYS GLU ILE ASN SER PRO ASN LEU LEU LYS MET SEQRES 21 B 482 ILE ARG HIS THR THR ASN LEU THR LEU TRP PHE GLU LYS SEQRES 22 B 482 CYS ILE VAL GLU THR GLU ASN LEU GLU GLU ARG VAL ALA SEQRES 23 B 482 VAL VAL SER ARG ILE ILE GLU ILE LEU GLN VAL PHE GLN SEQRES 24 B 482 GLU LEU ASN ASN PHE ASN GLY VAL LEU GLU VAL VAL SER SEQRES 25 B 482 ALA MET ASN SER SER PRO VAL TYR ARG LEU ASP HIS THR SEQRES 26 B 482 PHE GLU GLN ILE PRO SER ARG GLN LYS LYS ILE LEU GLU SEQRES 27 B 482 GLU ALA HIS GLU LEU SER GLU ASP HIS TYR LYS LYS TYR SEQRES 28 B 482 LEU ALA LYS LEU ARG SER ILE ASN PRO PRO CYS VAL PRO SEQRES 29 B 482 PHE PHE GLY ILE TYR LEU THR ASN ILE LEU LYS THR GLU SEQRES 30 B 482 GLU GLY ASN PRO GLU VAL LEU LYS ARG HIS GLY LYS GLU SEQRES 31 B 482 LEU ILE ASN PHE SER LYS ARG ARG LYS VAL ALA GLU ILE SEQRES 32 B 482 THR GLY GLU ILE GLN GLN TYR GLN ASN GLN PRO TYR CYS SEQRES 33 B 482 LEU ARG VAL GLU SER ASP ILE LYS ARG PHE PHE GLU ASN SEQRES 34 B 482 LEU ASN PRO MET GLY ASN SER MET GLU LYS GLU PHE THR SEQRES 35 B 482 ASP TYR LEU PHE ASN LYS SER LEU GLU ILE GLU PRO ARG SEQRES 36 B 482 ASN PRO LYS PRO LEU PRO ARG PHE PRO LYS LYS TYR SER SEQRES 37 B 482 TYR PRO LEU LYS SER PRO GLY VAL ARG PRO SER ASN PRO SEQRES 38 B 482 ARG SEQRES 1 C 167 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY SEQRES 2 C 167 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 C 167 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 C 167 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS SEQRES 5 C 167 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 C 167 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 C 167 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 C 167 GLU ASP ILE HIS GLN TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 C 167 LYS ASP SER ASP ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 C 167 LYS CYS ASP LEU ALA ALA ARG THR VAL GLU SER ARG GLN SEQRES 11 C 167 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO TYR ILE SEQRES 12 C 167 GLU THR SER ALA LYS THR ARG GLN GLY VAL GLU ASP ALA SEQRES 13 C 167 PHE TYR THR LEU VAL ARG GLU ILE ARG GLN HIS MODRES 6V9L CSO A 51 CYS MODIFIED RESIDUE HET CSO A 51 7 HET GNP A 201 32 HET MG A 202 1 HET ACT A 203 4 HET QTJ B2001 19 HET FMT B2002 3 HET FMT B2003 3 HET FMT B2004 3 HET FMT B2005 3 HET FMT B2006 3 HET GOL B2007 6 HET GOL B2008 6 HET FMT C 201 3 HET NA C 202 1 HETNAM CSO S-HYDROXYCYSTEINE HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM MG MAGNESIUM ION HETNAM ACT ACETATE ION HETNAM QTJ 4-(3-CHLORO-4-FLUOROPHENOXY)BENZENE-1-SULFONAMIDE HETNAM FMT FORMIC ACID HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CSO C3 H7 N O3 S FORMUL 4 GNP C10 H17 N6 O13 P3 FORMUL 5 MG MG 2+ FORMUL 6 ACT C2 H3 O2 1- FORMUL 7 QTJ C12 H9 CL F N O3 S FORMUL 8 FMT 6(C H2 O2) FORMUL 13 GOL 2(C3 H8 O3) FORMUL 16 NA NA 1+ FORMUL 17 HOH *1097(H2 O) HELIX 1 AA1 GLY A 15 ASN A 26 1 12 HELIX 2 AA2 GLN A 61 MET A 67 5 7 HELIX 3 AA3 ARG A 68 GLY A 75 1 8 HELIX 4 AA4 ASN A 86 ASP A 92 1 7 HELIX 5 AA5 ASP A 92 ASP A 105 1 14 HELIX 6 AA6 GLU A 126 GLY A 138 1 13 HELIX 7 AA7 GLY A 151 HIS A 166 1 16 HELIX 8 AA8 TYR B 575 GLU B 579 5 5 HELIX 9 AA9 THR B 605 THR B 614 1 10 HELIX 10 AB1 ASP B 620 TYR B 631 1 12 HELIX 11 AB2 ARG B 632 PHE B 634 5 3 HELIX 12 AB3 LYS B 636 GLU B 649 1 14 HELIX 13 AB4 THR B 656 ASN B 665 1 10 HELIX 14 AB5 SER B 671 TYR B 681 1 11 HELIX 15 AB6 TYR B 681 HIS B 700 1 20 HELIX 16 AB7 PHE B 701 ASP B 707 1 7 HELIX 17 AB8 ASP B 707 GLY B 719 1 13 HELIX 18 AB9 MET B 726 ILE B 742 1 17 HELIX 19 AC1 HIS B 770 PHE B 774 5 5 HELIX 20 AC2 HIS B 780 ALA B 798 1 19 HELIX 21 AC3 GLN B 800 LYS B 811 5 12 HELIX 22 AC4 ASP B 813 SER B 818 1 6 HELIX 23 AC5 SER B 818 GLU B 841 1 24 HELIX 24 AC6 ASN B 844 LEU B 865 1 22 HELIX 25 AC7 ASN B 867 ASN B 879 1 13 HELIX 26 AC8 SER B 880 ARG B 885 1 6 HELIX 27 AC9 LEU B 886 ILE B 893 1 8 HELIX 28 AD1 PRO B 894 LEU B 907 1 14 HELIX 29 AD2 SER B 908 ARG B 920 1 13 HELIX 30 AD3 PHE B 930 GLY B 943 1 14 HELIX 31 AD4 PHE B 958 GLN B 975 1 18 HELIX 32 AD5 GLU B 984 ASN B 993 1 10 HELIX 33 AD6 MET B 1001 GLU B 1017 1 17 HELIX 34 AD7 SER C 17 GLN C 25 1 9 HELIX 35 AD8 TYR C 64 ALA C 66 5 3 HELIX 36 AD9 MET C 67 THR C 74 1 8 HELIX 37 AE1 ASN C 86 ASP C 92 1 7 HELIX 38 AE2 ASP C 92 ASP C 105 1 14 HELIX 39 AE3 GLU C 126 GLY C 138 1 13 HELIX 40 AE4 GLY C 151 GLN C 165 1 15 SHEET 1 AA1 6 GLU A 37 ILE A 46 0 SHEET 2 AA1 6 GLU A 49 THR A 58 -1 O LEU A 53 N LYS A 42 SHEET 3 AA1 6 THR A 2 GLY A 10 1 N TYR A 4 O ASP A 54 SHEET 4 AA1 6 GLY A 77 ALA A 83 1 O LEU A 79 N VAL A 9 SHEET 5 AA1 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 6 AA1 6 TYR A 141 GLU A 143 1 O ILE A 142 N LEU A 113 SHEET 1 AA2 4 ILE B 586 PHE B 588 0 SHEET 2 AA2 4 ILE B 601 GLY B 604 -1 O ALA B 603 N ILE B 587 SHEET 3 AA2 4 LYS B 953 ASN B 957 -1 O ILE B 956 N GLY B 604 SHEET 4 AA2 4 VAL B 947 ARG B 950 -1 N LEU B 948 O LEU B 955 SHEET 1 AA3 6 ARG C 41 ILE C 46 0 SHEET 2 AA3 6 GLU C 49 ASP C 57 -1 O LEU C 53 N LYS C 42 SHEET 3 AA3 6 THR C 2 GLY C 10 1 N LEU C 6 O LEU C 56 SHEET 4 AA3 6 GLY C 77 ALA C 83 1 O VAL C 81 N VAL C 9 SHEET 5 AA3 6 MET C 111 LYS C 117 1 O ASN C 116 N PHE C 82 SHEET 6 AA3 6 TYR C 141 SER C 145 1 O THR C 144 N LYS C 117 LINK C THR A 50 N CSO A 51 1555 1555 1.32 LINK C CSO A 51 N LEU A 52 1555 1555 1.32 LINK OG SER A 17 MG MG A 202 1555 1555 2.06 LINK OG1 THR A 35 MG MG A 202 1555 1555 2.07 LINK O2G GNP A 201 MG MG A 202 1555 1555 2.04 LINK O2B GNP A 201 MG MG A 202 1555 1555 2.06 LINK MG MG A 202 O HOH A 325 1555 1555 2.08 LINK MG MG A 202 O HOH A 365 1555 1555 2.10 LINK OG1BTHR C 87 NA NA C 202 1555 1555 3.11 LINK OG1 THR C 124 NA NA C 202 1555 1555 3.18 LINK NA NA C 202 O HOH C 467 1555 1555 2.81 LINK NA NA C 202 O HOH C 475 1555 1555 2.18 CISPEP 1 PRO B 924 PRO B 925 0 9.83 CISPEP 2 ASN B 1020 PRO B 1021 0 6.17 SITE 1 AC1 32 GLY A 12 GLY A 13 VAL A 14 GLY A 15 SITE 2 AC1 32 LYS A 16 SER A 17 ALA A 18 PHE A 28 SITE 3 AC1 32 VAL A 29 ASP A 30 GLU A 31 TYR A 32 SITE 4 AC1 32 PRO A 34 THR A 35 GLY A 60 GLN A 61 SITE 5 AC1 32 ASN A 116 LYS A 117 ASP A 119 LEU A 120 SITE 6 AC1 32 SER A 145 ALA A 146 LYS A 147 MG A 202 SITE 7 AC1 32 HOH A 321 HOH A 325 HOH A 357 HOH A 365 SITE 8 AC1 32 HOH A 369 HOH A 386 HOH A 388 HOH A 420 SITE 1 AC2 5 SER A 17 THR A 35 GNP A 201 HOH A 325 SITE 2 AC2 5 HOH A 365 SITE 1 AC3 4 ARG A 135 HOH A 347 HOH A 358 HOH A 472 SITE 1 AC4 11 VAL B 852 MET B 878 ASN B 879 VAL B 883 SITE 2 AC4 11 TYR B 884 LEU B 886 THR B 889 PHE B 890 SITE 3 AC4 11 ILE B 893 GLU B 902 HIS B 905 SITE 1 AC5 5 GLN B 566 MET B 567 HIS B 616 MET B 617 SITE 2 AC5 5 HOH B2233 SITE 1 AC6 3 ARG A 128 ARG B 767 PRO B 768 SITE 1 AC7 7 GLU A 37 MET A 67 GLN A 70 ALA B 619 SITE 2 AC7 7 ARG B 688 HOH B2135 HOH B2193 SITE 1 AC8 6 GLU B 611 TYR B 615 HIS B 616 ARG B 647 SITE 2 AC8 6 TYR B 681 HOH B2297 SITE 1 AC9 2 LYS B1030 TYR B1031 SITE 1 AD1 5 SER B 793 ASP B 794 PRO B 978 TYR B 979 SITE 2 AD1 5 HOH B2246 SITE 1 AD2 5 ARG B 786 GLU B 864 VAL B1040 HOH B2104 SITE 2 AD2 5 HOH B2218 SITE 1 AD3 6 LEU B 938 GLY C 13 LYS C 16 SER C 17 SITE 2 AD3 6 GLU C 62 HOH C 303 SITE 1 AD4 6 ASN C 85 ASN C 86 THR C 87 THR C 124 SITE 2 AD4 6 HOH C 467 HOH C 475 CRYST1 183.383 183.383 178.069 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005453 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005453 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005616 0.00000