HEADER REPLICATION 03-JAN-20 6VF3 TITLE DNA POLYMERASE MU, 8-OXORGTP:AT GROUND STATE TERNARY COMPLEX, 50 MM TITLE 2 MN2+ (15 MIN) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-DIRECTED DNA/RNA POLYMERASE MU; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: POL MU,TERMINAL TRANSFERASE; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'); COMPND 9 CHAIN: T; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'-D(*CP*GP*TP*A)-3'); COMPND 13 CHAIN: P; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: DNA (5'-D(P*GP*CP*CP*G)-3'); COMPND 17 CHAIN: D; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: POLM, POLMU; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEXM; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630; SOURCE 14 MOL_ID: 3; SOURCE 15 SYNTHETIC: YES; SOURCE 16 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 17 ORGANISM_TAXID: 32630; SOURCE 18 MOL_ID: 4; SOURCE 19 SYNTHETIC: YES; SOURCE 20 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 21 ORGANISM_TAXID: 32630 KEYWDS TIME-LAPSE CRYSTALLOGRAPHY, OXIDIZED RIBONUCLEOTIDE INSERTION, DNA KEYWDS 2 POLYMERASE MU, DOUBLE STRAND BREAK REPAIR, REPLICATION EXPDTA X-RAY DIFFRACTION AUTHOR J.A.JAMSEN,S.H.WILSON REVDAT 2 11-OCT-23 6VF3 1 REMARK REVDAT 1 01-SEP-21 6VF3 0 JRNL AUTH J.A.JAMSEN,A.SASSA,D.D.SHOCK,W.A.BEARD,S.H.WILSON JRNL TITL DNA POLYMERASE MU, 8-OXORGTP:AT GROUND STATE TERNARY JRNL TITL 2 COMPLEX, 50 MM MN2+ (15 MIN) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 68611 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 3422 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.3890 - 4.3843 0.98 2887 156 0.1831 0.2042 REMARK 3 2 4.3843 - 3.4811 0.99 2806 136 0.1482 0.1653 REMARK 3 3 3.4811 - 3.0414 0.99 2776 142 0.1606 0.1484 REMARK 3 4 3.0414 - 2.7635 1.00 2749 160 0.1638 0.1884 REMARK 3 5 2.7635 - 2.5655 0.99 2752 139 0.1565 0.1673 REMARK 3 6 2.5655 - 2.4143 0.98 2680 134 0.1510 0.1752 REMARK 3 7 2.4143 - 2.2934 0.98 2704 158 0.1473 0.1776 REMARK 3 8 2.2934 - 2.1936 1.00 2744 137 0.1509 0.1644 REMARK 3 9 2.1936 - 2.1092 1.00 2724 159 0.1535 0.1592 REMARK 3 10 2.1092 - 2.0364 1.00 2753 122 0.1593 0.1633 REMARK 3 11 2.0364 - 1.9727 1.00 2707 152 0.1548 0.1902 REMARK 3 12 1.9727 - 1.9163 1.00 2732 142 0.1569 0.1874 REMARK 3 13 1.9163 - 1.8659 1.00 2736 136 0.1641 0.1913 REMARK 3 14 1.8659 - 1.8204 0.99 2676 139 0.1563 0.1631 REMARK 3 15 1.8204 - 1.7790 0.99 2686 140 0.1609 0.2090 REMARK 3 16 1.7790 - 1.7411 0.99 2690 146 0.1693 0.1771 REMARK 3 17 1.7411 - 1.7063 0.99 2689 152 0.1678 0.2001 REMARK 3 18 1.7063 - 1.6741 0.99 2685 129 0.1731 0.1947 REMARK 3 19 1.6741 - 1.6442 1.00 2721 147 0.1745 0.2200 REMARK 3 20 1.6442 - 1.6163 0.99 2683 148 0.1829 0.2040 REMARK 3 21 1.6163 - 1.5903 0.99 2686 142 0.1907 0.2474 REMARK 3 22 1.5903 - 1.5658 0.99 2697 128 0.2012 0.2250 REMARK 3 23 1.5658 - 1.5428 0.99 2664 143 0.2174 0.2460 REMARK 3 24 1.5428 - 1.5210 0.96 2562 135 0.2462 0.2822 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.800 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 138 THROUGH 494) REMARK 3 ORIGIN FOR THE GROUP (A): 5.1128 -4.2814 -11.7062 REMARK 3 T TENSOR REMARK 3 T11: 0.1229 T22: 0.1411 REMARK 3 T33: 0.1242 T12: 0.0092 REMARK 3 T13: -0.0267 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 1.1708 L22: 1.1016 REMARK 3 L33: 1.1194 L12: -0.0081 REMARK 3 L13: -0.2754 L23: 0.3929 REMARK 3 S TENSOR REMARK 3 S11: 0.0211 S12: 0.0204 S13: -0.0510 REMARK 3 S21: 0.0610 S22: -0.0357 S23: -0.0555 REMARK 3 S31: -0.0233 S32: 0.0589 S33: 0.0013 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'T' AND RESID 1 THROUGH 9) REMARK 3 ORIGIN FOR THE GROUP (A): -1.9856 -7.4296 -27.0149 REMARK 3 T TENSOR REMARK 3 T11: 0.2532 T22: 0.2112 REMARK 3 T33: 0.1779 T12: 0.0374 REMARK 3 T13: -0.0361 T23: -0.0267 REMARK 3 L TENSOR REMARK 3 L11: 0.0415 L22: 0.1363 REMARK 3 L33: 0.0516 L12: 0.0676 REMARK 3 L13: -0.0339 L23: -0.0808 REMARK 3 S TENSOR REMARK 3 S11: 0.1168 S12: 0.0582 S13: -0.0054 REMARK 3 S21: -0.3882 S22: -0.0698 S23: 0.0905 REMARK 3 S31: -0.2405 S32: -0.0658 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'P' AND RESID 1 THROUGH 4) REMARK 3 ORIGIN FOR THE GROUP (A): 3.4688 3.5876 -18.2021 REMARK 3 T TENSOR REMARK 3 T11: 0.2218 T22: 0.1999 REMARK 3 T33: 0.1641 T12: -0.0142 REMARK 3 T13: -0.0187 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 0.0145 L22: 0.0176 REMARK 3 L33: 0.0013 L12: 0.0009 REMARK 3 L13: 0.0021 L23: 0.0022 REMARK 3 S TENSOR REMARK 3 S11: 0.1982 S12: 0.1709 S13: -0.0211 REMARK 3 S21: 0.0099 S22: -0.0372 S23: 0.1492 REMARK 3 S31: -0.0022 S32: 0.0392 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'D' AND RESID 1 THROUGH 4) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6777 -20.0570 -29.4780 REMARK 3 T TENSOR REMARK 3 T11: 0.2235 T22: 0.2487 REMARK 3 T33: 0.1972 T12: 0.0054 REMARK 3 T13: -0.0181 T23: -0.0564 REMARK 3 L TENSOR REMARK 3 L11: 0.2676 L22: 0.4362 REMARK 3 L33: 0.6054 L12: -0.3305 REMARK 3 L13: 0.3931 L23: -0.5136 REMARK 3 S TENSOR REMARK 3 S11: 0.0236 S12: -0.1423 S13: -0.1190 REMARK 3 S21: -0.2071 S22: 0.1999 S23: -0.0160 REMARK 3 S31: 0.2082 S32: -0.1609 S33: 0.0549 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6VF3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1000244067. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68645 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.520 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.82600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4M04 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 85-90MM HEPES PH 7.5, 17-18% PEG4000, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.09900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.29000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.19250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.29000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.09900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.19250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -57.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, T, P, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 127 REMARK 465 SER A 128 REMARK 465 ALA A 129 REMARK 465 ALA A 130 REMARK 465 ALA A 131 REMARK 465 PRO A 132 REMARK 465 LEU A 133 REMARK 465 SER A 134 REMARK 465 PRO A 135 REMARK 465 ALA A 136 REMARK 465 TRP A 137 REMARK 465 HIS A 365 REMARK 465 GLN A 366 REMARK 465 HIS A 367 REMARK 465 SER A 368 REMARK 465 CYS A 369 REMARK 465 CYS A 370 REMARK 465 GLU A 371 REMARK 465 SER A 372 REMARK 465 PRO A 373 REMARK 465 THR A 374 REMARK 465 ARG A 375 REMARK 465 LEU A 376 REMARK 465 ALA A 377 REMARK 465 GLN A 378 REMARK 465 GLN A 379 REMARK 465 SER A 380 REMARK 465 HIS A 381 REMARK 465 MET A 382 REMARK 465 ASP A 383 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 158 CD OE1 OE2 REMARK 470 LEU A 196 CD1 CD2 REMARK 470 GLN A 200 CD OE1 NE2 REMARK 470 GLU A 207 CD OE1 OE2 REMARK 470 ARG A 211 NE CZ NH1 NH2 REMARK 470 GLU A 218 OE1 OE2 REMARK 470 VAL A 221 CG1 CG2 REMARK 470 GLU A 223 CD OE1 OE2 REMARK 470 ARG A 230 NH1 NH2 REMARK 470 LYS A 249 CE NZ REMARK 470 GLU A 267 OE1 OE2 REMARK 470 GLN A 268 CG CD OE1 NE2 REMARK 470 GLN A 270 CB CG CD OE1 NE2 REMARK 470 LYS A 271 CG CD CE NZ REMARK 470 GLN A 274 CG CD OE1 NE2 REMARK 470 LEU A 280 CD1 CD2 REMARK 470 GLN A 284 CG CD OE1 NE2 REMARK 470 GLN A 300 CG CD OE1 NE2 REMARK 470 GLU A 304 CD OE1 OE2 REMARK 470 GLN A 327 CD OE1 NE2 REMARK 470 LYS A 339 CD CE NZ REMARK 470 GLN A 355 CD OE1 NE2 REMARK 470 GLN A 357 CD OE1 NE2 REMARK 470 GLN A 364 CG CD OE1 NE2 REMARK 470 GLU A 465 OE1 OE2 REMARK 470 GLN A 466 CD OE1 NE2 REMARK 470 LYS A 467 CD CE NZ REMARK 470 GLN A 471 OE1 NE2 REMARK 470 GLU A 485 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG T 2 O3' DG T 2 C3' -0.099 REMARK 500 DG T 3 O3' DG T 3 C3' -0.065 REMARK 500 DA T 5 C5 DA T 5 N7 -0.042 REMARK 500 DA T 5 N9 DA T 5 C4 -0.036 REMARK 500 DT T 6 P DT T 6 O5' -0.119 REMARK 500 DT T 6 N1 DT T 6 C2 -0.076 REMARK 500 DA T 7 C5' DA T 7 C4' -0.083 REMARK 500 DA T 7 O3' DA T 7 C3' -0.088 REMARK 500 DA T 7 N9 DA T 7 C4 -0.040 REMARK 500 DT P 3 O3' DA P 4 P -0.227 REMARK 500 DG D 1 P DG D 1 OP3 -0.112 REMARK 500 DC D 3 O3' DC D 3 C3' -0.042 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 145 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ASP A 285 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG A 393 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 393 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 DT T 6 N1 - C2 - O2 ANGL. DEV. = -4.8 DEGREES REMARK 500 DT T 6 N3 - C4 - O4 ANGL. DEV. = 6.3 DEGREES REMARK 500 DT T 6 C5 - C4 - O4 ANGL. DEV. = -4.6 DEGREES REMARK 500 DT P 3 C3' - O3' - P ANGL. DEV. = 9.2 DEGREES REMARK 500 DA P 4 O5' - P - OP1 ANGL. DEV. = 13.4 DEGREES REMARK 500 DA P 4 O5' - P - OP2 ANGL. DEV. = -13.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 318 -150.30 -121.88 REMARK 500 THR A 318 -155.39 -126.37 REMARK 500 SER A 411 -148.81 -170.80 REMARK 500 LYS A 467 37.09 70.58 REMARK 500 ASN A 493 47.04 -88.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 EDO A 502 REMARK 610 EPE A 505 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 512 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 152 NE2 REMARK 620 2 HOH A 607 O 108.5 REMARK 620 3 HOH A 802 O 91.5 80.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 511 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 208 ND1 REMARK 620 2 DG D 1 OP3 71.3 REMARK 620 3 HOH D 215 O 83.5 88.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 504 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 241 O REMARK 620 2 ILE A 243 O 92.7 REMARK 620 3 VAL A 246 O 86.6 90.1 REMARK 620 4 DT P 3 OP1 175.4 90.6 90.2 REMARK 620 5 HOH P 104 O 91.0 172.0 83.0 85.3 REMARK 620 6 HOH P 113 O 97.5 92.5 175.1 85.6 94.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 507 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 330 OD1 REMARK 620 2 ASP A 332 OD2 96.5 REMARK 620 3 8GT A 506 O2G 83.2 171.6 REMARK 620 4 8GT A 506 O2B 165.9 96.5 83.1 REMARK 620 5 8GT A 506 O1A 95.0 92.1 96.3 90.1 REMARK 620 6 HOH A 692 O 87.4 86.8 84.9 87.8 177.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 508 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 330 OD2 REMARK 620 2 ASP A 332 OD1 100.1 REMARK 620 3 ASP A 418 OD2 94.0 94.4 REMARK 620 4 8GT A 506 O1A 90.3 89.7 173.5 REMARK 620 5 HOH A 711 O 167.3 90.7 78.3 96.5 REMARK 620 6 DA P 4 O3' 158.4 101.3 87.0 87.2 14.2 REMARK 620 7 HOH P 101 O 87.1 170.4 91.3 84.0 82.9 71.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 510 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 386 OE2 REMARK 620 2 HIS A 459 NE2 101.8 REMARK 620 3 HOH A 795 O 92.0 93.9 REMARK 620 4 HOH A 819 O 160.4 97.9 86.7 REMARK 620 5 HOH T 205 O 94.6 93.9 168.5 83.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN T 101 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG T 2 N7 REMARK 620 2 DG T 2 N7 2.6 REMARK 620 3 HOH T 201 O 91.2 92.5 REMARK 620 4 HOH T 210 O 93.2 95.3 96.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPE A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8GT A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 512 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DTT A 513 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN T 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN D 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6VEZ RELATED DB: PDB DBREF 6VF3 A 132 494 UNP Q9NP87 DPOLM_HUMAN 132 494 DBREF 6VF3 T 1 9 PDB 6VF3 6VF3 1 9 DBREF 6VF3 P 1 4 PDB 6VF3 6VF3 1 4 DBREF 6VF3 D 1 4 PDB 6VF3 6VF3 1 4 SEQADV 6VF3 GLY A 127 UNP Q9NP87 EXPRESSION TAG SEQADV 6VF3 SER A 128 UNP Q9NP87 EXPRESSION TAG SEQADV 6VF3 ALA A 129 UNP Q9NP87 EXPRESSION TAG SEQADV 6VF3 ALA A 130 UNP Q9NP87 EXPRESSION TAG SEQADV 6VF3 ALA A 131 UNP Q9NP87 EXPRESSION TAG SEQADV 6VF3 A UNP Q9NP87 PRO 398 DELETION SEQADV 6VF3 A UNP Q9NP87 GLY 399 DELETION SEQADV 6VF3 A UNP Q9NP87 ALA 400 DELETION SEQADV 6VF3 A UNP Q9NP87 ALA 401 DELETION SEQADV 6VF3 A UNP Q9NP87 VAL 402 DELETION SEQADV 6VF3 A UNP Q9NP87 GLY 403 DELETION SEQADV 6VF3 A UNP Q9NP87 GLY 404 DELETION SEQADV 6VF3 A UNP Q9NP87 SER 405 DELETION SEQADV 6VF3 A UNP Q9NP87 THR 406 DELETION SEQADV 6VF3 A UNP Q9NP87 ARG 407 DELETION SEQADV 6VF3 A UNP Q9NP87 PRO 408 DELETION SEQADV 6VF3 A UNP Q9NP87 CYS 409 DELETION SEQADV 6VF3 GLY A 410 UNP Q9NP87 PRO 410 CONFLICT SEQRES 1 A 356 GLY SER ALA ALA ALA PRO LEU SER PRO ALA TRP MET PRO SEQRES 2 A 356 ALA TYR ALA CYS GLN ARG PRO THR PRO LEU THR HIS HIS SEQRES 3 A 356 ASN THR GLY LEU SER GLU ALA LEU GLU ILE LEU ALA GLU SEQRES 4 A 356 ALA ALA GLY PHE GLU GLY SER GLU GLY ARG LEU LEU THR SEQRES 5 A 356 PHE CYS ARG ALA ALA SER VAL LEU LYS ALA LEU PRO SER SEQRES 6 A 356 PRO VAL THR THR LEU SER GLN LEU GLN GLY LEU PRO HIS SEQRES 7 A 356 PHE GLY GLU HIS SER SER ARG VAL VAL GLN GLU LEU LEU SEQRES 8 A 356 GLU HIS GLY VAL CYS GLU GLU VAL GLU ARG VAL ARG ARG SEQRES 9 A 356 SER GLU ARG TYR GLN THR MET LYS LEU PHE THR GLN ILE SEQRES 10 A 356 PHE GLY VAL GLY VAL LYS THR ALA ASP ARG TRP TYR ARG SEQRES 11 A 356 GLU GLY LEU ARG THR LEU ASP ASP LEU ARG GLU GLN PRO SEQRES 12 A 356 GLN LYS LEU THR GLN GLN GLN LYS ALA GLY LEU GLN HIS SEQRES 13 A 356 HIS GLN ASP LEU SER THR PRO VAL LEU ARG SER ASP VAL SEQRES 14 A 356 ASP ALA LEU GLN GLN VAL VAL GLU GLU ALA VAL GLY GLN SEQRES 15 A 356 ALA LEU PRO GLY ALA THR VAL THR LEU THR GLY GLY PHE SEQRES 16 A 356 ARG ARG GLY LYS LEU GLN GLY HIS ASP VAL ASP PHE LEU SEQRES 17 A 356 ILE THR HIS PRO LYS GLU GLY GLN GLU ALA GLY LEU LEU SEQRES 18 A 356 PRO ARG VAL MET CYS ARG LEU GLN ASP GLN GLY LEU ILE SEQRES 19 A 356 LEU TYR HIS GLN HIS GLN HIS SER CYS CYS GLU SER PRO SEQRES 20 A 356 THR ARG LEU ALA GLN GLN SER HIS MET ASP ALA PHE GLU SEQRES 21 A 356 ARG SER PHE CYS ILE PHE ARG LEU PRO GLN PRO GLY SER SEQRES 22 A 356 TRP LYS ALA VAL ARG VAL ASP LEU VAL VAL ALA PRO VAL SEQRES 23 A 356 SER GLN PHE PRO PHE ALA LEU LEU GLY TRP THR GLY SER SEQRES 24 A 356 LYS LEU PHE GLN ARG GLU LEU ARG ARG PHE SER ARG LYS SEQRES 25 A 356 GLU LYS GLY LEU TRP LEU ASN SER HIS GLY LEU PHE ASP SEQRES 26 A 356 PRO GLU GLN LYS THR PHE PHE GLN ALA ALA SER GLU GLU SEQRES 27 A 356 ASP ILE PHE ARG HIS LEU GLY LEU GLU TYR LEU PRO PRO SEQRES 28 A 356 GLU GLN ARG ASN ALA SEQRES 1 T 9 DC DG DG DC DA DT DA DC DG SEQRES 1 P 4 DC DG DT DA SEQRES 1 D 4 DG DC DC DG HET EDO A 501 4 HET EDO A 502 3 HET EDO A 503 4 HET NA A 504 1 HET EPE A 505 5 HET 8GT A 506 33 HET MN A 507 1 HET MN A 508 1 HET MN A 509 1 HET MN A 510 1 HET MN A 511 1 HET MN A 512 1 HET DTT A 513 1 HET MN T 101 1 HET MN D 101 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM NA SODIUM ION HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM 8GT 8-OXO-GUANOSINE-5'-TRIPHOSPHATE HETNAM MN MANGANESE (II) ION HETNAM DTT 2,3-DIHYDROXY-1,4-DITHIOBUTANE HETSYN EDO ETHYLENE GLYCOL HETSYN EPE HEPES HETSYN DTT 1,4-DITHIOTHREITOL FORMUL 5 EDO 3(C2 H6 O2) FORMUL 8 NA NA 1+ FORMUL 9 EPE C8 H18 N2 O4 S FORMUL 10 8GT C10 H16 N5 O15 P3 FORMUL 11 MN 8(MN 2+) FORMUL 17 DTT C4 H10 O2 S2 FORMUL 20 HOH *328(H2 O) HELIX 1 AA1 TYR A 141 ARG A 145 5 5 HELIX 2 AA2 ASN A 153 GLU A 170 1 18 HELIX 3 AA3 SER A 172 LEU A 189 1 18 HELIX 4 AA4 THR A 195 GLN A 200 5 6 HELIX 5 AA5 GLY A 206 GLY A 220 1 15 HELIX 6 AA6 CYS A 222 SER A 231 1 10 HELIX 7 AA7 SER A 231 GLN A 242 1 12 HELIX 8 AA8 GLY A 247 GLU A 257 1 11 HELIX 9 AA9 THR A 261 GLU A 267 1 7 HELIX 10 AB1 GLN A 268 LEU A 272 5 5 HELIX 11 AB2 THR A 273 HIS A 282 1 10 HELIX 12 AB3 HIS A 282 SER A 287 1 6 HELIX 13 AB4 ARG A 292 LEU A 310 1 19 HELIX 14 AB5 THR A 318 ARG A 323 1 6 HELIX 15 AB6 GLY A 345 GLN A 357 1 13 HELIX 16 AB7 PRO A 423 SER A 425 5 3 HELIX 17 AB8 GLN A 426 GLY A 436 1 11 HELIX 18 AB9 SER A 437 GLY A 453 1 17 HELIX 19 AC1 SER A 474 LEU A 482 1 9 HELIX 20 AC2 PRO A 488 ARG A 492 5 5 SHEET 1 AA1 2 VAL A 290 LEU A 291 0 SHEET 2 AA1 2 GLN A 327 GLY A 328 -1 O GLY A 328 N VAL A 290 SHEET 1 AA2 5 THR A 314 LEU A 317 0 SHEET 2 AA2 5 VAL A 331 THR A 336 -1 O LEU A 334 N THR A 316 SHEET 3 AA2 5 SER A 411 VAL A 421 1 O VAL A 420 N ILE A 335 SHEET 4 AA2 5 ARG A 387 GLN A 396 -1 N PHE A 392 O VAL A 415 SHEET 5 AA2 5 ILE A 360 TYR A 362 -1 N LEU A 361 O ILE A 391 SHEET 1 AA3 3 TRP A 455 LEU A 456 0 SHEET 2 AA3 3 LEU A 461 ASP A 463 -1 O PHE A 462 N TRP A 455 SHEET 3 AA3 3 THR A 468 PHE A 469 -1 O THR A 468 N ASP A 463 LINK SG ACYS A 180 S1 DTT A 513 1555 1555 1.92 LINK SG BCYS A 180 S1 DTT A 513 1555 1555 2.15 LINK NE2 HIS A 152 MN MN A 512 1555 1555 2.33 LINK ND1 HIS A 208 MN MN A 511 1555 1555 2.57 LINK NE2 HIS A 219 MN MN A 509 1555 1555 2.18 LINK O THR A 241 NA NA A 504 1555 1555 2.37 LINK O ILE A 243 NA NA A 504 1555 1555 2.45 LINK O VAL A 246 NA NA A 504 1555 1555 2.33 LINK OD1 ASP A 330 MN MN A 507 1555 1555 2.06 LINK OD2 ASP A 330 MN MN A 508 1555 1555 2.05 LINK OD2 ASP A 332 MN MN A 507 1555 1555 2.15 LINK OD1 ASP A 332 MN MN A 508 1555 1555 2.14 LINK OE2 GLU A 386 MN MN A 510 1555 1555 2.23 LINK OD2 ASP A 418 MN MN A 508 1555 1555 2.15 LINK NE2 HIS A 459 MN MN A 510 1555 1555 2.42 LINK NA NA A 504 OP1 DT P 3 1555 1555 2.58 LINK NA NA A 504 O HOH P 104 1555 1555 2.37 LINK NA NA A 504 O HOH P 113 1555 1555 2.35 LINK O2G 8GT A 506 MN MN A 507 1555 1555 2.32 LINK O2B 8GT A 506 MN MN A 507 1555 1555 2.11 LINK O1A 8GT A 506 MN MN A 507 1555 1555 2.07 LINK O1A 8GT A 506 MN MN A 508 1555 1555 2.35 LINK MN MN A 507 O HOH A 692 1555 1555 2.22 LINK MN MN A 508 O BHOH A 711 1555 1555 2.26 LINK MN MN A 508 O3'A DA P 4 1555 1555 2.58 LINK MN MN A 508 O HOH P 101 1555 1555 2.13 LINK MN MN A 510 O HOH A 795 1555 1555 2.40 LINK MN MN A 510 O HOH A 819 1555 1555 1.99 LINK MN MN A 510 O HOH T 205 1555 1555 2.02 LINK MN MN A 511 OP3 DG D 1 1555 1555 2.11 LINK MN MN A 511 O HOH D 215 1555 1555 2.63 LINK MN MN A 512 O AHOH A 607 1555 1555 2.73 LINK MN MN A 512 O HOH A 802 1555 1555 1.92 LINK N7 A DG T 2 MN MN T 101 1555 1555 2.29 LINK N7 B DG T 2 MN MN T 101 1555 1555 2.24 LINK MN MN T 101 O HOH T 201 1555 1555 2.79 LINK MN MN T 101 O HOH T 210 1555 1555 2.38 LINK N7 DG D 1 MN MN D 101 1555 1555 2.38 CISPEP 1 GLY A 436 SER A 437 0 -10.58 SITE 1 AC1 7 ARG A 387 GLY A 433 TRP A 434 ARG A 445 SITE 2 AC1 7 EDO A 502 8GT A 506 DA P 4 SITE 1 AC2 8 ARG A 387 ARG A 445 ASN A 457 SER A 458 SITE 2 AC2 8 HIS A 459 EDO A 501 DT T 6 DA T 7 SITE 1 AC3 5 ARG A 253 ARG A 256 GLU A 451 LYS A 452 SITE 2 AC3 5 HOH A 676 SITE 1 AC4 6 THR A 241 ILE A 243 VAL A 246 DT P 3 SITE 2 AC4 6 HOH P 104 HOH P 113 SITE 1 AC5 3 LYS A 325 LEU A 326 GLN A 327 SITE 1 AC6 24 GLY A 319 GLY A 320 ARG A 323 LYS A 325 SITE 2 AC6 24 GLY A 328 HIS A 329 ASP A 330 ASP A 332 SITE 3 AC6 24 GLY A 433 TRP A 434 GLY A 436 LYS A 438 SITE 4 AC6 24 GLN A 441 EDO A 501 MN A 507 MN A 508 SITE 5 AC6 24 HOH A 646 HOH A 692 HOH A 711 HOH A 726 SITE 6 AC6 24 HOH A 742 DA P 4 HOH P 101 DA T 5 SITE 1 AC7 5 ASP A 330 ASP A 332 8GT A 506 MN A 508 SITE 2 AC7 5 HOH A 692 SITE 1 AC8 8 ASP A 330 ASP A 332 ASP A 418 8GT A 506 SITE 2 AC8 8 MN A 507 HOH A 711 DA P 4 HOH P 101 SITE 1 AC9 2 GLU A 218 HIS A 219 SITE 1 AD1 5 GLU A 386 HIS A 459 HOH A 795 HOH A 819 SITE 2 AD1 5 HOH T 205 SITE 1 AD2 3 HIS A 208 DG D 1 HOH D 215 SITE 1 AD3 3 HIS A 152 HOH A 607 HOH A 802 SITE 1 AD4 1 CYS A 180 SITE 1 AD5 3 DG T 2 HOH T 201 HOH T 210 SITE 1 AD6 3 DG D 1 HOH D 206 HOH D 216 CRYST1 60.198 62.385 118.580 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016612 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016029 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008433 0.00000