HEADER TRANSCRIPTION 08-JAN-20 6VGH TITLE ESTROGEN RECEPTOR ALPHA LIGAND BINDING DOMAIN Y537S MUTANT IN COMPLEX TITLE 2 WITH LASOFOXIFENE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTROGEN RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ER,ER-ALPHA,ESTRADIOL RECEPTOR,NUCLEAR RECEPTOR SUBFAMILY 3 COMPND 5 GROUP A MEMBER 1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESR1, ESR, NR3A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BREAST CANCER, STEROID RECEPTOR, ACTIVATING MUTANT, SELECTIVE KEYWDS 2 ESTROGEN RECEPTOR MODULATOR, ANTIESTROGEN, LASOFOXIFENE, KEYWDS 3 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR S.W.FANNING,G.L.GREENE REVDAT 2 11-OCT-23 6VGH 1 REMARK REVDAT 1 12-FEB-20 6VGH 0 JRNL AUTH S.W.FANNING JRNL TITL LIGAND BINDING DOMAIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692+SVN REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 3 NUMBER OF REFLECTIONS : 28411 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1389 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.7000 - 4.5168 0.90 2695 135 0.2075 0.2489 REMARK 3 2 4.5168 - 3.5873 0.88 2640 134 0.1797 0.2328 REMARK 3 3 3.5873 - 3.1345 0.91 2717 140 0.2069 0.2701 REMARK 3 4 3.1345 - 2.8482 0.94 2798 149 0.2199 0.3158 REMARK 3 5 2.8482 - 2.6442 0.92 2737 149 0.2306 0.2946 REMARK 3 6 2.6442 - 2.4884 0.94 2785 153 0.2290 0.2576 REMARK 3 7 2.4884 - 2.3638 0.94 2791 120 0.2219 0.3089 REMARK 3 8 2.3638 - 2.2610 0.91 2676 154 0.2404 0.2927 REMARK 3 9 2.2610 - 2.1740 0.88 2612 148 0.2821 0.3443 REMARK 3 10 2.1740 - 2.1000 0.86 2571 107 0.2495 0.2943 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.286 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.820 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.14 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3740 REMARK 3 ANGLE : 0.681 5059 REMARK 3 CHIRALITY : 0.025 604 REMARK 3 PLANARITY : 0.002 622 REMARK 3 DIHEDRAL : 13.829 1368 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 307 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.7064 38.8381 -19.1570 REMARK 3 T TENSOR REMARK 3 T11: 0.6491 T22: 0.2617 REMARK 3 T33: 0.4084 T12: 0.1070 REMARK 3 T13: -0.1300 T23: 0.0663 REMARK 3 L TENSOR REMARK 3 L11: 3.9064 L22: 2.3885 REMARK 3 L33: 1.7607 L12: -1.0220 REMARK 3 L13: -0.1442 L23: 0.3432 REMARK 3 S TENSOR REMARK 3 S11: -0.0372 S12: 0.0601 S13: 0.6367 REMARK 3 S21: -0.1103 S22: -0.0348 S23: -0.2688 REMARK 3 S31: -0.8598 S32: -0.2350 S33: 0.0597 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 342 THROUGH 407 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.3590 30.1287 -20.0911 REMARK 3 T TENSOR REMARK 3 T11: 0.4047 T22: 0.1050 REMARK 3 T33: 0.2368 T12: 0.3026 REMARK 3 T13: -0.0014 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 2.4603 L22: 1.5465 REMARK 3 L33: 1.8101 L12: -0.8520 REMARK 3 L13: -0.1009 L23: -0.0528 REMARK 3 S TENSOR REMARK 3 S11: -0.2016 S12: 0.3463 S13: 0.3013 REMARK 3 S21: 0.2546 S22: 0.1452 S23: 0.0883 REMARK 3 S31: -0.6531 S32: -0.2306 S33: 0.0421 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 408 THROUGH 422 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.0650 22.9242 -2.8041 REMARK 3 T TENSOR REMARK 3 T11: 0.6764 T22: 0.4627 REMARK 3 T33: 0.4530 T12: 0.1957 REMARK 3 T13: 0.1617 T23: 0.0361 REMARK 3 L TENSOR REMARK 3 L11: 2.7065 L22: 7.2845 REMARK 3 L33: 3.2260 L12: -2.8067 REMARK 3 L13: 0.2231 L23: 1.2974 REMARK 3 S TENSOR REMARK 3 S11: -0.4166 S12: -0.2106 S13: -0.7343 REMARK 3 S21: 1.0447 S22: 0.2790 S23: 0.7633 REMARK 3 S31: 0.4736 S32: -0.3531 S33: 0.1076 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 423 THROUGH 437 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.1375 23.6252 -5.7202 REMARK 3 T TENSOR REMARK 3 T11: 0.5854 T22: 0.2874 REMARK 3 T33: 0.1980 T12: 0.1563 REMARK 3 T13: -0.0265 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 4.7291 L22: 6.0693 REMARK 3 L33: 1.9595 L12: 1.5937 REMARK 3 L13: -1.5965 L23: -1.2552 REMARK 3 S TENSOR REMARK 3 S11: 0.0288 S12: -0.5277 S13: -0.1234 REMARK 3 S21: 0.4100 S22: -0.1722 S23: 0.0871 REMARK 3 S31: -0.1752 S32: 0.2068 S33: 0.1600 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 438 THROUGH 496 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.4279 28.5775 -25.0977 REMARK 3 T TENSOR REMARK 3 T11: 0.3083 T22: 0.1825 REMARK 3 T33: 0.3301 T12: 0.0356 REMARK 3 T13: -0.0026 T23: 0.1302 REMARK 3 L TENSOR REMARK 3 L11: 3.4009 L22: 2.7967 REMARK 3 L33: 6.1505 L12: 0.4464 REMARK 3 L13: 1.6032 L23: 1.3995 REMARK 3 S TENSOR REMARK 3 S11: -0.1195 S12: 0.3512 S13: 0.3634 REMARK 3 S21: -0.1794 S22: -0.1064 S23: -0.3170 REMARK 3 S31: -0.6357 S32: 0.3505 S33: 0.2226 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 497 THROUGH 525 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.5120 21.1392 -15.0179 REMARK 3 T TENSOR REMARK 3 T11: 0.3492 T22: 0.1372 REMARK 3 T33: 0.2043 T12: 0.1027 REMARK 3 T13: -0.0071 T23: 0.0349 REMARK 3 L TENSOR REMARK 3 L11: 9.3418 L22: 3.9320 REMARK 3 L33: 2.0317 L12: 3.2541 REMARK 3 L13: 0.6486 L23: -0.4060 REMARK 3 S TENSOR REMARK 3 S11: -0.0948 S12: -0.3003 S13: -0.6749 REMARK 3 S21: 0.1834 S22: -0.0554 S23: -0.3673 REMARK 3 S31: 0.0218 S32: 0.1905 S33: 0.1511 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 526 THROUGH 550 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.4935 29.6531 -33.8815 REMARK 3 T TENSOR REMARK 3 T11: 0.4784 T22: 0.8723 REMARK 3 T33: 0.4382 T12: 0.2796 REMARK 3 T13: 0.0499 T23: -0.0349 REMARK 3 L TENSOR REMARK 3 L11: 0.7653 L22: 2.0194 REMARK 3 L33: 2.2138 L12: -1.6847 REMARK 3 L13: 1.2792 L23: -2.8425 REMARK 3 S TENSOR REMARK 3 S11: 0.2552 S12: 0.4316 S13: 0.0760 REMARK 3 S21: 0.2724 S22: -0.1169 S23: 1.3680 REMARK 3 S31: -0.1949 S32: -0.5420 S33: -0.1651 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 307 THROUGH 363 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.5071 -3.1674 -18.1759 REMARK 3 T TENSOR REMARK 3 T11: 0.5060 T22: 0.2911 REMARK 3 T33: 0.2169 T12: 0.2146 REMARK 3 T13: 0.0299 T23: 0.0466 REMARK 3 L TENSOR REMARK 3 L11: 3.8978 L22: 4.1001 REMARK 3 L33: 1.3806 L12: 1.1711 REMARK 3 L13: 0.0017 L23: 0.0223 REMARK 3 S TENSOR REMARK 3 S11: -0.3176 S12: 0.2959 S13: -0.1356 REMARK 3 S21: -0.1032 S22: 0.1408 S23: -0.2984 REMARK 3 S31: 0.4946 S32: 0.5705 S33: 0.1347 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 364 THROUGH 421 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.5538 2.4986 -21.1077 REMARK 3 T TENSOR REMARK 3 T11: 0.3581 T22: 0.1768 REMARK 3 T33: 0.2402 T12: 0.1760 REMARK 3 T13: -0.0066 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 1.2134 L22: 3.7107 REMARK 3 L33: 2.3716 L12: -0.2529 REMARK 3 L13: -0.1263 L23: -0.1201 REMARK 3 S TENSOR REMARK 3 S11: 0.1180 S12: 0.2225 S13: -0.0731 REMARK 3 S21: -0.2987 S22: -0.2271 S23: 0.0763 REMARK 3 S31: 0.2393 S32: 0.0842 S33: 0.1163 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 422 THROUGH 545 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.9205 12.5604 -16.7366 REMARK 3 T TENSOR REMARK 3 T11: 0.2298 T22: 0.2038 REMARK 3 T33: 0.2210 T12: 0.1278 REMARK 3 T13: -0.0094 T23: 0.0436 REMARK 3 L TENSOR REMARK 3 L11: 2.0338 L22: 3.6981 REMARK 3 L33: 2.4732 L12: 0.5135 REMARK 3 L13: 0.7212 L23: 0.3852 REMARK 3 S TENSOR REMARK 3 S11: 0.0284 S12: 0.1162 S13: 0.1030 REMARK 3 S21: 0.0839 S22: -0.1946 S23: -0.1968 REMARK 3 S31: 0.1067 S32: 0.2666 S33: 0.1569 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6VGH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1000246347. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28416 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.090 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 837.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 6V8T REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3,350, TRIS PH 7.5, MGCL2, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 184.31667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 92.15833 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 138.23750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 46.07917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 230.39583 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 293 REMARK 465 HIS A 294 REMARK 465 HIS A 295 REMARK 465 HIS A 296 REMARK 465 HIS A 297 REMARK 465 HIS A 298 REMARK 465 GLU A 299 REMARK 465 ASN A 300 REMARK 465 LEU A 301 REMARK 465 TYR A 302 REMARK 465 PHE A 303 REMARK 465 GLN A 304 REMARK 465 SER A 305 REMARK 465 MET A 306 REMARK 465 PRO A 336 REMARK 465 PHE A 337 REMARK 465 SER A 338 REMARK 465 GLU A 339 REMARK 465 ALA A 340 REMARK 465 VAL A 418 REMARK 465 GLU A 419 REMARK 465 LEU A 462 REMARK 465 SER A 463 REMARK 465 SER A 464 REMARK 465 SER A 527 REMARK 465 MET A 528 REMARK 465 LYS A 529 REMARK 465 SER A 530 REMARK 465 LYS A 531 REMARK 465 ALA A 551 REMARK 465 PRO A 552 REMARK 465 THR A 553 REMARK 465 SER A 554 REMARK 465 HIS B 293 REMARK 465 HIS B 294 REMARK 465 HIS B 295 REMARK 465 HIS B 296 REMARK 465 HIS B 297 REMARK 465 HIS B 298 REMARK 465 GLU B 299 REMARK 465 ASN B 300 REMARK 465 LEU B 301 REMARK 465 TYR B 302 REMARK 465 PHE B 303 REMARK 465 GLN B 304 REMARK 465 SER B 305 REMARK 465 MET B 306 REMARK 465 SER B 338 REMARK 465 GLU B 339 REMARK 465 ALA B 340 REMARK 465 GLY B 420 REMARK 465 LEU B 462 REMARK 465 SER B 463 REMARK 465 MET B 528 REMARK 465 LYS B 529 REMARK 465 SER B 530 REMARK 465 LYS B 531 REMARK 465 ASN B 532 REMARK 465 VAL B 533 REMARK 465 ALA B 546 REMARK 465 HIS B 547 REMARK 465 ARG B 548 REMARK 465 LEU B 549 REMARK 465 HIS B 550 REMARK 465 ALA B 551 REMARK 465 PRO B 552 REMARK 465 THR B 553 REMARK 465 SER B 554 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 321 CG OD1 OD2 REMARK 470 TYR A 331 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP A 332 CG OD1 OD2 REMARK 470 ARG A 335 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 416 CE NZ REMARK 470 SER A 417 OG REMARK 470 GLU A 423 CG CD OE1 OE2 REMARK 470 GLU A 443 CG CD OE1 OE2 REMARK 470 LYS A 492 CG CD CE NZ REMARK 470 ASN A 532 CG OD1 ND2 REMARK 470 VAL A 533 CG1 CG2 REMARK 470 VAL A 534 CG1 CG2 REMARK 470 ARG A 548 NH1 NH2 REMARK 470 SER B 309 OG REMARK 470 GLU B 330 CG CD OE1 OE2 REMARK 470 ARG B 335 CZ NH1 NH2 REMARK 470 PHE B 337 CD1 CE1 CE2 CZ REMARK 470 GLU B 397 CD OE1 OE2 REMARK 470 SER B 417 OG REMARK 470 GLU B 419 CG CD OE1 OE2 REMARK 470 PHE B 425 CD1 CE1 CZ REMARK 470 LYS B 467 CE NZ REMARK 470 ARG B 477 CZ NH1 NH2 REMARK 470 LYS B 481 CG CD CE NZ REMARK 470 TYR B 526 CD2 CE2 CZ OH REMARK 470 VAL B 534 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 421 60.20 -150.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C3D A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C3D B 601 DBREF 6VGH A 307 554 UNP P03372 ESR1_HUMAN 307 554 DBREF 6VGH B 307 554 UNP P03372 ESR1_HUMAN 307 554 SEQADV 6VGH HIS A 293 UNP P03372 EXPRESSION TAG SEQADV 6VGH HIS A 294 UNP P03372 EXPRESSION TAG SEQADV 6VGH HIS A 295 UNP P03372 EXPRESSION TAG SEQADV 6VGH HIS A 296 UNP P03372 EXPRESSION TAG SEQADV 6VGH HIS A 297 UNP P03372 EXPRESSION TAG SEQADV 6VGH HIS A 298 UNP P03372 EXPRESSION TAG SEQADV 6VGH GLU A 299 UNP P03372 EXPRESSION TAG SEQADV 6VGH ASN A 300 UNP P03372 EXPRESSION TAG SEQADV 6VGH LEU A 301 UNP P03372 EXPRESSION TAG SEQADV 6VGH TYR A 302 UNP P03372 EXPRESSION TAG SEQADV 6VGH PHE A 303 UNP P03372 EXPRESSION TAG SEQADV 6VGH GLN A 304 UNP P03372 EXPRESSION TAG SEQADV 6VGH SER A 305 UNP P03372 EXPRESSION TAG SEQADV 6VGH MET A 306 UNP P03372 EXPRESSION TAG SEQADV 6VGH SER A 381 UNP P03372 CYS 381 CONFLICT SEQADV 6VGH SER A 417 UNP P03372 CYS 417 CONFLICT SEQADV 6VGH SER A 530 UNP P03372 CYS 530 CONFLICT SEQADV 6VGH SER A 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQADV 6VGH HIS B 293 UNP P03372 EXPRESSION TAG SEQADV 6VGH HIS B 294 UNP P03372 EXPRESSION TAG SEQADV 6VGH HIS B 295 UNP P03372 EXPRESSION TAG SEQADV 6VGH HIS B 296 UNP P03372 EXPRESSION TAG SEQADV 6VGH HIS B 297 UNP P03372 EXPRESSION TAG SEQADV 6VGH HIS B 298 UNP P03372 EXPRESSION TAG SEQADV 6VGH GLU B 299 UNP P03372 EXPRESSION TAG SEQADV 6VGH ASN B 300 UNP P03372 EXPRESSION TAG SEQADV 6VGH LEU B 301 UNP P03372 EXPRESSION TAG SEQADV 6VGH TYR B 302 UNP P03372 EXPRESSION TAG SEQADV 6VGH PHE B 303 UNP P03372 EXPRESSION TAG SEQADV 6VGH GLN B 304 UNP P03372 EXPRESSION TAG SEQADV 6VGH SER B 305 UNP P03372 EXPRESSION TAG SEQADV 6VGH MET B 306 UNP P03372 EXPRESSION TAG SEQADV 6VGH SER B 381 UNP P03372 CYS 381 CONFLICT SEQADV 6VGH SER B 417 UNP P03372 CYS 417 CONFLICT SEQADV 6VGH SER B 530 UNP P03372 CYS 530 CONFLICT SEQADV 6VGH SER B 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQRES 1 A 262 HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE GLN SER SEQRES 2 A 262 MET ALA LEU SER LEU THR ALA ASP GLN MET VAL SER ALA SEQRES 3 A 262 LEU LEU ASP ALA GLU PRO PRO ILE LEU TYR SER GLU TYR SEQRES 4 A 262 ASP PRO THR ARG PRO PHE SER GLU ALA SER MET MET GLY SEQRES 5 A 262 LEU LEU THR ASN LEU ALA ASP ARG GLU LEU VAL HIS MET SEQRES 6 A 262 ILE ASN TRP ALA LYS ARG VAL PRO GLY PHE VAL ASP LEU SEQRES 7 A 262 THR LEU HIS ASP GLN VAL HIS LEU LEU GLU SER ALA TRP SEQRES 8 A 262 LEU GLU ILE LEU MET ILE GLY LEU VAL TRP ARG SER MET SEQRES 9 A 262 GLU HIS PRO GLY LYS LEU LEU PHE ALA PRO ASN LEU LEU SEQRES 10 A 262 LEU ASP ARG ASN GLN GLY LYS SER VAL GLU GLY MET VAL SEQRES 11 A 262 GLU ILE PHE ASP MET LEU LEU ALA THR SER SER ARG PHE SEQRES 12 A 262 ARG MET MET ASN LEU GLN GLY GLU GLU PHE VAL CYS LEU SEQRES 13 A 262 LYS SER ILE ILE LEU LEU ASN SER GLY VAL TYR THR PHE SEQRES 14 A 262 LEU SER SER THR LEU LYS SER LEU GLU GLU LYS ASP HIS SEQRES 15 A 262 ILE HIS ARG VAL LEU ASP LYS ILE THR ASP THR LEU ILE SEQRES 16 A 262 HIS LEU MET ALA LYS ALA GLY LEU THR LEU GLN GLN GLN SEQRES 17 A 262 HIS GLN ARG LEU ALA GLN LEU LEU LEU ILE LEU SER HIS SEQRES 18 A 262 ILE ARG HIS MET SER ASN LYS GLY MET GLU HIS LEU TYR SEQRES 19 A 262 SER MET LYS SER LYS ASN VAL VAL PRO LEU SER ASP LEU SEQRES 20 A 262 LEU LEU GLU MET LEU ASP ALA HIS ARG LEU HIS ALA PRO SEQRES 21 A 262 THR SER SEQRES 1 B 262 HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE GLN SER SEQRES 2 B 262 MET ALA LEU SER LEU THR ALA ASP GLN MET VAL SER ALA SEQRES 3 B 262 LEU LEU ASP ALA GLU PRO PRO ILE LEU TYR SER GLU TYR SEQRES 4 B 262 ASP PRO THR ARG PRO PHE SER GLU ALA SER MET MET GLY SEQRES 5 B 262 LEU LEU THR ASN LEU ALA ASP ARG GLU LEU VAL HIS MET SEQRES 6 B 262 ILE ASN TRP ALA LYS ARG VAL PRO GLY PHE VAL ASP LEU SEQRES 7 B 262 THR LEU HIS ASP GLN VAL HIS LEU LEU GLU SER ALA TRP SEQRES 8 B 262 LEU GLU ILE LEU MET ILE GLY LEU VAL TRP ARG SER MET SEQRES 9 B 262 GLU HIS PRO GLY LYS LEU LEU PHE ALA PRO ASN LEU LEU SEQRES 10 B 262 LEU ASP ARG ASN GLN GLY LYS SER VAL GLU GLY MET VAL SEQRES 11 B 262 GLU ILE PHE ASP MET LEU LEU ALA THR SER SER ARG PHE SEQRES 12 B 262 ARG MET MET ASN LEU GLN GLY GLU GLU PHE VAL CYS LEU SEQRES 13 B 262 LYS SER ILE ILE LEU LEU ASN SER GLY VAL TYR THR PHE SEQRES 14 B 262 LEU SER SER THR LEU LYS SER LEU GLU GLU LYS ASP HIS SEQRES 15 B 262 ILE HIS ARG VAL LEU ASP LYS ILE THR ASP THR LEU ILE SEQRES 16 B 262 HIS LEU MET ALA LYS ALA GLY LEU THR LEU GLN GLN GLN SEQRES 17 B 262 HIS GLN ARG LEU ALA GLN LEU LEU LEU ILE LEU SER HIS SEQRES 18 B 262 ILE ARG HIS MET SER ASN LYS GLY MET GLU HIS LEU TYR SEQRES 19 B 262 SER MET LYS SER LYS ASN VAL VAL PRO LEU SER ASP LEU SEQRES 20 B 262 LEU LEU GLU MET LEU ASP ALA HIS ARG LEU HIS ALA PRO SEQRES 21 B 262 THR SER HET C3D A 601 31 HET C3D B 601 31 HETNAM C3D (5R,6S)-6-PHENYL-5-[4-(2-PYRROLIDIN-1-YLETHOXY)PHENYL]- HETNAM 2 C3D 5,6,7,8-TETRAHYDRONAPHTHALEN-2-OL HETSYN C3D LASOFOXIFENE FORMUL 3 C3D 2(C28 H31 N O2) FORMUL 5 HOH *256(H2 O) HELIX 1 AA1 THR A 311 ALA A 322 1 12 HELIX 2 AA2 MET A 342 LYS A 362 1 21 HELIX 3 AA3 THR A 371 SER A 395 1 25 HELIX 4 AA4 ARG A 412 LYS A 416 1 5 HELIX 5 AA5 VAL A 422 ASN A 439 1 18 HELIX 6 AA6 GLN A 441 SER A 456 1 16 HELIX 7 AA7 LEU A 466 ALA A 493 1 28 HELIX 8 AA8 THR A 496 TYR A 526 1 31 HELIX 9 AA9 PRO A 535 ASP A 545 1 11 HELIX 10 AB1 THR B 311 ALA B 322 1 12 HELIX 11 AB2 MET B 342 LYS B 362 1 21 HELIX 12 AB3 THR B 371 SER B 395 1 25 HELIX 13 AB4 ASN B 413 VAL B 418 5 6 HELIX 14 AB5 VAL B 422 ASN B 439 1 18 HELIX 15 AB6 GLN B 441 SER B 456 1 16 HELIX 16 AB7 THR B 465 LYS B 492 1 28 HELIX 17 AB8 THR B 496 SER B 527 1 32 HELIX 18 AB9 PRO B 535 ASP B 545 1 11 SHEET 1 AA1 2 LYS A 401 ALA A 405 0 SHEET 2 AA1 2 LEU A 408 ASP A 411 -1 O LEU A 410 N LEU A 402 SHEET 1 AA2 2 LYS B 401 ALA B 405 0 SHEET 2 AA2 2 LEU B 408 ASP B 411 -1 O LEU B 410 N LEU B 402 SITE 1 AC1 12 MET A 343 LEU A 346 ALA A 350 ASP A 351 SITE 2 AC1 12 GLU A 353 TRP A 383 LEU A 387 LEU A 391 SITE 3 AC1 12 ARG A 394 MET A 421 LEU A 525 HOH A 737 SITE 1 AC2 12 MET B 343 LEU B 346 THR B 347 ALA B 350 SITE 2 AC2 12 ASP B 351 GLU B 353 TRP B 383 LEU B 387 SITE 3 AC2 12 LEU B 391 ARG B 394 LEU B 525 HOH B 764 CRYST1 58.692 58.692 276.475 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017038 0.009837 0.000000 0.00000 SCALE2 0.000000 0.019674 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003617 0.00000