HEADER OXIDOREDUCTASE 12-JAN-20 6VI9 TITLE OBSERVING A RING-CLEAVING DIOXYGENASE IN ACTION THROUGH A CRYSTALLINE TITLE 2 LENS - AN ALKYLPEROXO BOUND STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-HYDROXYANTHRANILATE 3,4-DIOXYGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 3-HYDROXYANTHRANILATE OXYGENASE,3-HAO,3-HYDROXYANTHRANILIC COMPND 5 ACID DIOXYGENASE,HAD; COMPND 6 EC: 1.13.11.6; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CUPRIAVIDUS METALLIDURANS (STRAIN ATCC 43123 / SOURCE 3 DSM 2839 / NBRC 102507 / CH34); SOURCE 4 ORGANISM_TAXID: 266264; SOURCE 5 STRAIN: ATCC 43123 / DSM 2839 / NBRC 102507 / CH34; SOURCE 6 GENE: NBAC, RMET_5193; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS IN CRYSTALLO REACTION, EXTRADIOL DIOXYGENASE, NAD+ BIOSYNTHESIS, KEYWDS 2 INTERMEDIATE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.WANG,F.LIU,Y.YANG,A.LIU REVDAT 3 11-OCT-23 6VI9 1 REMARK REVDAT 2 06-OCT-21 6VI9 1 JRNL REVDAT 1 29-JUL-20 6VI9 0 JRNL AUTH Y.WANG,K.F.LIU,Y.YANG,I.DAVIS,A.LIU JRNL TITL OBSERVING 3-HYDROXYANTHRANILATE-3,4-DIOXYGENASE IN ACTION JRNL TITL 2 THROUGH A CRYSTALLINE LENS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 117 19720 2020 JRNL REFN ESSN 1091-6490 JRNL PMID 32732435 JRNL DOI 10.1073/PNAS.2005327117 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.8 REMARK 3 NUMBER OF REFLECTIONS : 9921 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 992 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.5500 - 4.4047 0.99 1537 170 0.1936 0.2223 REMARK 3 2 4.4047 - 3.4978 1.00 1432 159 0.1872 0.2370 REMARK 3 3 3.4978 - 3.0561 1.00 1386 155 0.2257 0.3070 REMARK 3 4 3.0561 - 2.7769 1.00 1373 152 0.2817 0.3061 REMARK 3 5 2.7769 - 2.5779 1.00 1380 154 0.2744 0.3410 REMARK 3 6 2.5779 - 2.4260 1.00 1343 149 0.2779 0.3306 REMARK 3 7 2.4260 - 2.3100 0.35 478 53 0.2839 0.3871 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.710 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.38 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 1456 REMARK 3 ANGLE : 1.021 1981 REMARK 3 CHIRALITY : 0.054 197 REMARK 3 PLANARITY : 0.007 264 REMARK 3 DIHEDRAL : 3.967 853 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6VI9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1000246449. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97919 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11036 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 16.70 REMARK 200 R MERGE (I) : 0.12200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 17.40 REMARK 200 R MERGE FOR SHELL (I) : 0.99600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 1YFU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG8000, 0.1 M TRIS-HCL, 0.2 M REMARK 280 MAGNESIUM CHLORIDE, PH 8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 154.29333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 77.14667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 115.72000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 38.57333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 192.86667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 154.29333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 77.14667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 38.57333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 115.72000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 192.86667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 28.89500 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 50.04761 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 38.57333 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 SER A -8 REMARK 465 SER A -7 REMARK 465 GLY A -6 REMARK 465 HIS A -5 REMARK 465 ILE A -4 REMARK 465 GLU A -3 REMARK 465 GLY A -2 REMARK 465 ARG A -1 REMARK 465 HIS A 0 REMARK 465 ARG A 172 REMARK 465 ALA A 173 REMARK 465 ALA A 174 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 75 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 407 O HOH A 457 1.92 REMARK 500 O HOH A 401 O HOH A 466 2.03 REMARK 500 O HOH A 426 O HOH A 486 2.10 REMARK 500 O HOH A 466 O HOH A 478 2.11 REMARK 500 NH2 ARG A 12 O HOH A 401 2.17 REMARK 500 O HOH A 404 O HOH A 482 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 451 O HOH A 478 10665 1.95 REMARK 500 O HOH A 472 O HOH A 489 8665 2.07 REMARK 500 O HOH A 404 O HOH A 457 8665 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 25 -84.80 -95.77 REMARK 500 ARG A 28 111.25 -163.33 REMARK 500 ALA A 127 -70.94 -74.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 QXM A 302 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 51 ND1 REMARK 620 2 QXM A 302 O02 87.1 REMARK 620 3 QXM A 302 O11 90.8 91.9 REMARK 620 4 GLU A 57 OE1 94.2 168.4 99.6 REMARK 620 5 GLU A 57 OE2 142.2 129.8 81.3 51.6 REMARK 620 6 HIS A 95 NE2 99.9 92.3 168.6 76.1 87.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 301 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 125 SG REMARK 620 2 CYS A 128 SG 142.8 REMARK 620 3 CYS A 162 SG 108.3 90.2 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE2 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QXM A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TRS A 303 DBREF 6VI9 A 1 174 UNP Q1LCS4 3HAO_CUPMC 1 174 SEQADV 6VI9 MET A -20 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 GLY A -19 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 HIS A -18 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 HIS A -17 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 HIS A -16 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 HIS A -15 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 HIS A -14 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 HIS A -13 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 HIS A -12 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 HIS A -11 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 HIS A -10 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 HIS A -9 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 SER A -8 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 SER A -7 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 GLY A -6 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 HIS A -5 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 ILE A -4 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 GLU A -3 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 GLY A -2 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 ARG A -1 UNP Q1LCS4 EXPRESSION TAG SEQADV 6VI9 HIS A 0 UNP Q1LCS4 EXPRESSION TAG SEQRES 1 A 195 MET GLY HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS SER SEQRES 2 A 195 SER GLY HIS ILE GLU GLY ARG HIS MET LEU THR TYR GLY SEQRES 3 A 195 ALA PRO PHE ASN PHE PRO ARG TRP ILE ASP GLU HIS ALA SEQRES 4 A 195 HIS LEU LEU LYS PRO PRO VAL GLY ASN ARG GLN VAL TRP SEQRES 5 A 195 GLN ASP SER ASP PHE ILE VAL THR VAL VAL GLY GLY PRO SEQRES 6 A 195 ASN HIS ARG THR ASP TYR HIS ASP ASP PRO LEU GLU GLU SEQRES 7 A 195 PHE PHE TYR GLN LEU ARG GLY ASN ALA TYR LEU ASN LEU SEQRES 8 A 195 TRP VAL ASP GLY ARG ARG GLU ARG ALA ASP LEU LYS GLU SEQRES 9 A 195 GLY ASP ILE PHE LEU LEU PRO PRO HIS VAL ARG HIS SER SEQRES 10 A 195 PRO GLN ARG PRO GLU ALA GLY SER ALA CYS LEU VAL ILE SEQRES 11 A 195 GLU ARG GLN ARG PRO ALA GLY MET LEU ASP GLY PHE GLU SEQRES 12 A 195 TRP TYR CYS ASP ALA CYS GLY HIS LEU VAL HIS ARG VAL SEQRES 13 A 195 GLU VAL GLN LEU LYS SER ILE VAL THR ASP LEU PRO PRO SEQRES 14 A 195 LEU PHE GLU SER PHE TYR ALA SER GLU ASP LYS ARG ARG SEQRES 15 A 195 CYS PRO HIS CYS GLY GLN VAL HIS PRO GLY ARG ALA ALA HET FE2 A 301 1 HET QXM A 302 14 HET TRS A 303 8 HETNAM FE2 FE (II) ION HETNAM QXM (5R,6Z)-5-(HYDROPEROXY-KAPPAO)-5-(HYDROXY-KAPPAO)-6- HETNAM 2 QXM IMINOCYCLOHEXA-1,3-DIENE-1-CARBOXYLATO(2-)IRON HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN TRS TRIS BUFFER FORMUL 2 FE2 FE 2+ FORMUL 3 QXM C7 H4 FE N O5 1+ FORMUL 4 TRS C4 H12 N O3 1+ FORMUL 5 HOH *97(H2 O) HELIX 1 AA1 ASN A 9 HIS A 17 1 9 HELIX 2 AA2 HIS A 17 LYS A 22 1 6 HELIX 3 AA3 LEU A 146 ALA A 155 1 10 HELIX 4 AA4 SER A 156 ARG A 161 1 6 SHEET 1 AA1 5 ASN A 27 GLN A 29 0 SHEET 2 AA1 5 PHE A 36 VAL A 41 -1 O VAL A 40 N ARG A 28 SHEET 3 AA1 5 ALA A 105 ARG A 111 -1 O GLU A 110 N ILE A 37 SHEET 4 AA1 5 GLU A 57 ARG A 63 -1 N TYR A 60 O LEU A 107 SHEET 5 AA1 5 ILE A 86 LEU A 89 -1 O LEU A 89 N GLU A 57 SHEET 1 AA2 3 TYR A 50 ASP A 52 0 SHEET 2 AA2 3 ASP A 119 TYR A 124 -1 O GLU A 122 N TYR A 50 SHEET 3 AA2 3 LEU A 131 VAL A 137 -1 O VAL A 137 N ASP A 119 SHEET 1 AA3 3 ARG A 78 LEU A 81 0 SHEET 2 AA3 3 ALA A 66 LEU A 70 -1 N ALA A 66 O LEU A 81 SHEET 3 AA3 3 HIS A 95 GLN A 98 -1 O GLN A 98 N TYR A 67 LINK ND1 HIS A 51 FE QXM A 302 1555 1555 2.50 LINK OE1 GLU A 57 FE QXM A 302 1555 1555 2.42 LINK OE2 GLU A 57 FE QXM A 302 1555 1555 2.61 LINK NE2 HIS A 95 FE QXM A 302 1555 1555 2.42 LINK SG CYS A 125 FE FE2 A 301 1555 1555 2.69 LINK SG CYS A 128 FE FE2 A 301 1555 1555 2.16 LINK SG CYS A 162 FE FE2 A 301 1555 1555 2.62 CISPEP 1 PRO A 23 PRO A 24 0 7.66 CISPEP 2 GLY A 43 PRO A 44 0 -4.09 SITE 1 AC1 4 CYS A 125 CYS A 128 CYS A 162 CYS A 165 SITE 1 AC2 10 VAL A 41 ARG A 47 HIS A 51 GLU A 57 SITE 2 AC2 10 PHE A 59 HIS A 95 PRO A 97 ARG A 99 SITE 3 AC2 10 GLU A 110 HOH A 408 SITE 1 AC3 7 VAL A 132 HIS A 133 ASP A 158 LYS A 159 SITE 2 AC3 7 ARG A 161 PRO A 163 HOH A 430 CRYST1 57.790 57.790 231.440 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017304 0.009990 0.000000 0.00000 SCALE2 0.000000 0.019981 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004321 0.00000