HEADER IMMUNE SYSTEM/VIRAL PROTEIN 27-JAN-20 6VLW TITLE CRYSTAL STRUCTURE OF 426COD IN COMPLEX WITH VRC01 FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: VRC01 FAB HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: VRC01 FAB LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: 426COD; COMPND 11 CHAIN: G; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 17 ORGANISM_TAXID: 11676; SOURCE 18 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS HIV, 426C, OUTER DOMAIN, VRC01, 426COD, FAB, CD4, ANTIBODY, KEYWDS 2 IMMUNOGEN, IMMUNE SYSTEM, IMMUNE SYSTEM-VIRAL PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.WEIDLE,M.PANCERA REVDAT 2 11-OCT-23 6VLW 1 REMARK REVDAT 1 09-DEC-20 6VLW 0 JRNL AUTH Y.R.LIN,K.R.PARKS,C.WEIDLE,A.S.NAIDU,A.KHECHADURI,A.O.RIKER, JRNL AUTH 2 B.TAKUSHI,J.H.CHUN,A.J.BORST,D.VEESLER,A.STUART,P.AGRAWAL, JRNL AUTH 3 M.GRAY,M.PANCERA,P.S.HUANG,L.STAMATATOS JRNL TITL HIV-1 VRC01 GERMLINE-TARGETING IMMUNOGENS SELECT DISTINCT JRNL TITL 2 EPITOPE-SPECIFIC B CELL RECEPTORS. JRNL REF IMMUNITY V. 53 840 2020 JRNL REFN ISSN 1074-7613 JRNL PMID 33053332 JRNL DOI 10.1016/J.IMMUNI.2020.09.007 REMARK 2 REMARK 2 RESOLUTION. 3.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 15984 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.850 REMARK 3 FREE R VALUE TEST SET COUNT : 775 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.5700 - 6.2100 1.00 2720 183 0.2295 0.2791 REMARK 3 2 6.2100 - 4.9300 1.00 2696 133 0.1947 0.2194 REMARK 3 3 4.9300 - 4.3100 1.00 2685 132 0.1712 0.2046 REMARK 3 4 4.3100 - 3.9200 1.00 2685 116 0.1905 0.2645 REMARK 3 5 3.9200 - 3.6400 0.99 2654 114 0.2448 0.2851 REMARK 3 6 3.6400 - 3.4200 0.67 1769 97 0.2722 0.3717 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.513 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.675 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 63.14 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 4620 REMARK 3 ANGLE : 0.663 6298 REMARK 3 CHIRALITY : 0.049 714 REMARK 3 PLANARITY : 0.005 821 REMARK 3 DIHEDRAL : 16.483 1648 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6VLW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1000245267. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15995 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.420 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.48 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5IFA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18.425% PEG 3350, 11.011% 2-METHYL-2,4 REMARK 280 -PENTANEDIOL, 0.22M LITHIUM SULFATE, 0.11M IMIDAZOLE PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.09400 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 49.64100 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 16.54700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, G, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS H 129 REMARK 465 SER H 130 REMARK 465 THR H 131 REMARK 465 SER H 132 REMARK 465 GLY H 133 REMARK 465 SER H 215 REMARK 465 CYS H 216 REMARK 465 ASP H 217 REMARK 465 LYS H 218 REMARK 465 THR H 219 REMARK 465 THR G 1 REMARK 465 ILE G 2 REMARK 465 SER G 3 REMARK 465 GLY G 174 REMARK 465 SER G 175 REMARK 465 GLY G 176 REMARK 465 SER G 177 REMARK 465 GLY G 178 REMARK 465 HIS G 179 REMARK 465 HIS G 180 REMARK 465 HIS G 181 REMARK 465 HIS G 182 REMARK 465 HIS G 183 REMARK 465 HIS G 184 REMARK 465 GLY G 185 REMARK 465 LEU G 186 REMARK 465 ASN G 187 REMARK 465 ASP G 188 REMARK 465 ILE G 189 REMARK 465 PHE G 190 REMARK 465 GLU G 191 REMARK 465 ALA G 192 REMARK 465 GLN G 193 REMARK 465 LYS G 194 REMARK 465 ILE G 195 REMARK 465 GLU G 196 REMARK 465 TRP G 197 REMARK 465 HIS G 198 REMARK 465 GLU G 199 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL H 2 CG1 CG2 REMARK 470 GLN H 3 CG CD OE1 NE2 REMARK 470 VAL H 5 CG1 CG2 REMARK 470 VAL H 57 CG1 CG2 REMARK 470 VAL H 84 CG1 CG2 REMARK 470 ASN H 97 CG OD1 ND2 REMARK 470 ARG H 105 CG CD NE CZ NH1 NH2 REMARK 470 SER H 127 OG REMARK 470 SER H 128 OG REMARK 470 SER H 156 OG REMARK 470 SER H 161 OG REMARK 470 LEU H 189 CG CD1 CD2 REMARK 470 LYS H 201 CG CD CE NZ REMARK 470 LYS H 206 CG CD CE NZ REMARK 470 LYS H 214 CG CD CE NZ REMARK 470 VAL L 3 CG1 CG2 REMARK 470 THR L 10 OG1 CG2 REMARK 470 SER L 12 OG REMARK 470 SER L 14 OG REMARK 470 SER L 26 OG REMARK 470 GLN L 27 CG CD OE1 NE2 REMARK 470 ASN L 77 CG OD1 ND2 REMARK 470 GLU L 79 CG CD OE1 OE2 REMARK 470 SER L 80 OG REMARK 470 GLN L 100 CG CD OE1 NE2 REMARK 470 LYS L 103 CG CD CE NZ REMARK 470 VAL L 106 CG1 CG2 REMARK 470 THR L 111 OG1 CG2 REMARK 470 VAL L 112 CG1 CG2 REMARK 470 VAL L 117 CG1 CG2 REMARK 470 LYS L 128 CG CD CE NZ REMARK 470 THR L 131 OG1 CG2 REMARK 470 SER L 133 OG REMARK 470 LYS L 147 CG CD CE NZ REMARK 470 GLN L 149 CG CD OE1 NE2 REMARK 470 ASN L 154 CG OD1 ND2 REMARK 470 LYS L 171 CG CD CE NZ REMARK 470 LYS L 190 CG CD CE NZ REMARK 470 LYS L 192 CG CD CE NZ REMARK 470 VAL L 193 CG1 CG2 REMARK 470 SER L 204 OG REMARK 470 VAL L 207 CG1 CG2 REMARK 470 GLU L 215 CG CD OE1 OE2 REMARK 470 CYS L 216 SG REMARK 470 ASN G 4 CG OD1 ND2 REMARK 470 LYS G 20 CG CD CE NZ REMARK 470 SER G 62 OG REMARK 470 VAL G 65 CG1 CG2 REMARK 470 GLU G 77 CG CD OE1 OE2 REMARK 470 GLU G 78 CG CD OE1 OE2 REMARK 470 VAL G 81 CG1 CG2 REMARK 470 LYS G 100 CG CD CE NZ REMARK 470 GLU G 103 CG CD OE1 OE2 REMARK 470 VAL G 105 CG1 CG2 REMARK 470 ILE G 114 CG1 CG2 CD1 REMARK 470 SER G 115 OG REMARK 470 ARG G 117 CG CD NE CZ NH1 NH2 REMARK 470 GLU G 121 CG CD OE1 OE2 REMARK 470 LYS G 128 CG CD CE NZ REMARK 470 LYS G 131 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY H 65 NH2 ARG H 82A 2.09 REMARK 500 NH1 ARG H 61 O THR G 39 2.09 REMARK 500 O HIS L 191 NH1 ARG L 213 2.14 REMARK 500 OG SER G 21 O HOH G 301 2.14 REMARK 500 OE1 GLN L 168 OH TYR L 175 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL H 2 87.94 -45.20 REMARK 500 CYS H 22 102.45 -165.07 REMARK 500 SER H 82B 73.97 54.99 REMARK 500 VAL L 47 -68.28 -94.31 REMARK 500 SER L 50 29.09 49.74 REMARK 500 SER L 52 -11.37 -147.45 REMARK 500 THR L 53 109.45 -57.83 REMARK 500 ASP L 60 -8.81 -57.21 REMARK 500 ASN L 77 61.33 60.45 REMARK 500 LEU L 78 107.89 -55.49 REMARK 500 TYR L 91 -131.61 61.48 REMARK 500 SER L 116 75.90 -113.33 REMARK 500 ASN L 140 80.17 44.14 REMARK 500 GLN L 162 92.99 -161.39 REMARK 500 SER L 164 118.22 -173.54 REMARK 500 LYS L 192 -79.85 -124.12 REMARK 500 THR L 208 72.90 -116.39 REMARK 500 PRO G 13 37.75 -74.10 REMARK 500 ALA G 14 81.09 49.49 REMARK 500 ASP G 48 -129.79 63.71 REMARK 500 ASP G 50 60.91 -106.41 REMARK 500 GLN G 68 -67.46 64.04 REMARK 500 GLU G 78 -50.29 86.38 REMARK 500 SER G 84 141.24 -175.25 REMARK 500 ASP G 86 130.05 -171.55 REMARK 500 THR G 167 33.18 -89.12 REMARK 500 REMARK 500 REMARK: NULL DBREF 6VLW H 1 219 PDB 6VLW 6VLW 1 219 DBREF 6VLW L 1 216 PDB 6VLW 6VLW 1 216 DBREF 6VLW G 1 199 PDB 6VLW 6VLW 1 199 SEQRES 1 H 227 PCA VAL GLN LEU VAL GLN SER GLY GLY GLN MET LYS LYS SEQRES 2 H 227 PRO GLY GLU SER MET ARG ILE SER CYS ARG ALA SER GLY SEQRES 3 H 227 TYR GLU PHE ILE ASP CYS THR LEU ASN TRP ILE ARG LEU SEQRES 4 H 227 ALA PRO GLY LYS ARG PRO GLU TRP MET GLY TRP LEU LYS SEQRES 5 H 227 PRO ARG GLY GLY ALA VAL ASN TYR ALA ARG PRO LEU GLN SEQRES 6 H 227 GLY ARG VAL THR MET THR ARG ASP VAL TYR SER ASP THR SEQRES 7 H 227 ALA PHE LEU GLU LEU ARG SER LEU THR VAL ASP ASP THR SEQRES 8 H 227 ALA VAL TYR PHE CYS THR ARG GLY LYS ASN CYS ASP TYR SEQRES 9 H 227 ASN TRP ASP PHE GLU HIS TRP GLY ARG GLY THR PRO VAL SEQRES 10 H 227 ILE VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE SEQRES 11 H 227 PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR SEQRES 12 H 227 ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU SEQRES 13 H 227 PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER SEQRES 14 H 227 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY SEQRES 15 H 227 LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SEQRES 16 H 227 SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS SEQRES 17 H 227 LYS PRO SER ASN THR LYS VAL ASP LYS ARG VAL GLU PRO SEQRES 18 H 227 LYS SER CYS ASP LYS THR SEQRES 1 L 210 GLU ILE VAL LEU THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 L 210 SER PRO GLY GLU THR ALA ILE ILE SER CYS ARG THR SER SEQRES 3 L 210 GLN TYR GLY SER LEU ALA TRP TYR GLN GLN ARG PRO GLY SEQRES 4 L 210 GLN ALA PRO ARG LEU VAL ILE TYR SER GLY SER THR ARG SEQRES 5 L 210 ALA ALA GLY ILE PRO ASP ARG PHE SER GLY SER ARG TRP SEQRES 6 L 210 GLY PRO ASP TYR ASN LEU THR ILE SER ASN LEU GLU SER SEQRES 7 L 210 GLY ASP PHE GLY VAL TYR TYR CYS GLN GLN TYR GLU PHE SEQRES 8 L 210 PHE GLY GLN GLY THR LYS VAL GLN VAL ASP ILE LYS ARG SEQRES 9 L 210 THR VAL ALA ALA PRO SER VAL PHE ILE PHE PRO PRO SER SEQRES 10 L 210 ASP GLU GLN LEU LYS SER GLY THR ALA SER VAL VAL CYS SEQRES 11 L 210 LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA LYS VAL GLN SEQRES 12 L 210 TRP LYS VAL ASP ASN ALA LEU GLN SER GLY ASN SER GLN SEQRES 13 L 210 GLU SER VAL THR GLU GLN ASP SER LYS ASP SER THR TYR SEQRES 14 L 210 SER LEU SER SER THR LEU THR LEU SER LYS ALA ASP TYR SEQRES 15 L 210 GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL THR HIS GLN SEQRES 16 L 210 GLY LEU SER SER PRO VAL THR LYS SER PHE ASN ARG GLY SEQRES 17 L 210 GLU CYS SEQRES 1 G 199 THR ILE SER ASN ALA THR ILE MET LEU PRO CYS ARG PRO SEQRES 2 G 199 ALA PRO PRO PRO HIS CYS LYS SER ASN ILE THR GLY LEU SEQRES 3 G 199 LEU LEU LEU ARG ASP GLY GLY ASP THR ILE ASN ASN THR SEQRES 4 G 199 GLU ILE PHE ARG PRO SER GLY GLY ASP GLU ASP ALA GLN SEQRES 5 G 199 TRP CYS MET GLU ARG LEU GLY ILE PRO SER SER VAL VAL SEQRES 6 G 199 SER THR GLN LEU LEU LEU ASN GLY SER LEU ALA GLU GLU SEQRES 7 G 199 GLU ILE VAL ILE ARG SER LYS ASP LEU SER ASP ASN ALA SEQRES 8 G 199 LYS THR ILE CYS VAL GLN LEU GLN LYS SER VAL GLU ILE SEQRES 9 G 199 VAL CYS THR GLY ALA GLY TYR CYS GLN ILE SER GLY ARG SEQRES 10 G 199 ASN TRP SER GLU ALA VAL ASN GLN VAL LYS LYS LYS LEU SEQRES 11 G 199 LYS GLU HIS PHE PRO HIS LYS ASN ILE SER PHE GLN SER SEQRES 12 G 199 SER SER GLY GLY ASP LEU GLU ILE THR THR HIS SER PHE SEQRES 13 G 199 ASN CYS GLY GLY GLU PHE PHE TYR CYS ASN THR SER GLY SEQRES 14 G 199 LEU PHE GLN ASP GLY SER GLY SER GLY HIS HIS HIS HIS SEQRES 15 G 199 HIS HIS GLY LEU ASN ASP ILE PHE GLU ALA GLN LYS ILE SEQRES 16 G 199 GLU TRP HIS GLU HET PCA H 1 14 HET NAG A 1 14 HET NAG A 2 14 HET BMA A 3 11 HET EDO H 301 10 HET CL H 302 1 HET CL H 303 1 HET CL H 304 1 HET CL H 305 1 HET CL H 306 1 HET SO4 L 301 5 HET NA L 302 1 HET SO4 G 201 5 HET CL G 202 1 HET CL G 203 1 HET CL G 204 1 HET NAG G 205 14 HET NAG G 206 27 HET NAG G 207 14 HETNAM PCA PYROGLUTAMIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION HETNAM NA SODIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 1 PCA C5 H7 N O3 FORMUL 4 NAG 5(C8 H15 N O6) FORMUL 4 BMA C6 H12 O6 FORMUL 5 EDO C2 H6 O2 FORMUL 6 CL 8(CL 1-) FORMUL 11 SO4 2(O4 S 2-) FORMUL 12 NA NA 1+ FORMUL 20 HOH *60(H2 O) HELIX 1 AA1 GLU H 28 CYS H 32 5 5 HELIX 2 AA2 ARG H 61 GLN H 64 5 4 HELIX 3 AA3 THR H 83 THR H 87 5 5 HELIX 4 AA4 SER H 156 ALA H 158 5 3 HELIX 5 AA5 SER H 186 GLN H 192 1 7 HELIX 6 AA6 LYS H 201 ASN H 204 5 4 HELIX 7 AA7 GLU L 79 PHE L 83 5 5 HELIX 8 AA8 SER L 123 GLY L 130 1 8 HELIX 9 AA9 LYS L 185 HIS L 191 1 7 HELIX 10 AB1 THR G 35 ASN G 37 5 3 HELIX 11 AB2 GLY G 47 GLU G 49 5 3 HELIX 12 AB3 ASP G 50 LEU G 58 1 9 HELIX 13 AB4 GLY G 116 PHE G 134 1 19 HELIX 14 AB5 ASP G 148 THR G 153 1 6 SHEET 1 AA1 4 GLN H 3 GLN H 6 0 SHEET 2 AA1 4 MET H 18 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 AA1 4 THR H 77 LEU H 82 -1 O LEU H 80 N ILE H 20 SHEET 4 AA1 4 VAL H 67 ASP H 72 -1 N THR H 68 O GLU H 81 SHEET 1 AA2 6 GLN H 10 LYS H 12 0 SHEET 2 AA2 6 THR H 107 VAL H 111 1 O ILE H 110 N LYS H 12 SHEET 3 AA2 6 ALA H 88 ASN H 97 -1 N ALA H 88 O VAL H 109 SHEET 4 AA2 6 LEU H 34 ALA H 40 -1 N ILE H 37 O PHE H 91 SHEET 5 AA2 6 LYS H 43 LYS H 52 -1 O MET H 48 N TRP H 36 SHEET 6 AA2 6 ALA H 56 TYR H 59 -1 O ALA H 56 N LYS H 52 SHEET 1 AA3 4 GLN H 10 LYS H 12 0 SHEET 2 AA3 4 THR H 107 VAL H 111 1 O ILE H 110 N LYS H 12 SHEET 3 AA3 4 ALA H 88 ASN H 97 -1 N ALA H 88 O VAL H 109 SHEET 4 AA3 4 TYR H 100 TRP H 103 -1 O HIS H 102 N ARG H 94 SHEET 1 AA4 4 SER H 120 LEU H 124 0 SHEET 2 AA4 4 THR H 135 TYR H 145 -1 O GLY H 139 N LEU H 124 SHEET 3 AA4 4 TYR H 176 PRO H 185 -1 O TYR H 176 N TYR H 145 SHEET 4 AA4 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AA5 4 SER H 120 LEU H 124 0 SHEET 2 AA5 4 THR H 135 TYR H 145 -1 O GLY H 139 N LEU H 124 SHEET 3 AA5 4 TYR H 176 PRO H 185 -1 O TYR H 176 N TYR H 145 SHEET 4 AA5 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AA6 3 THR H 151 TRP H 154 0 SHEET 2 AA6 3 TYR H 194 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 AA6 3 THR H 205 VAL H 211 -1 O THR H 205 N HIS H 200 SHEET 1 AA7 4 THR L 5 SER L 7 0 SHEET 2 AA7 4 ALA L 19 ARG L 24 -1 O ARG L 24 N THR L 5 SHEET 3 AA7 4 ASP L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AA7 4 PHE L 62 TRP L 67 -1 N SER L 65 O ASN L 72 SHEET 1 AA8 6 THR L 10 LEU L 13 0 SHEET 2 AA8 6 THR L 102 VAL L 106 1 O GLN L 105 N LEU L 11 SHEET 3 AA8 6 VAL L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AA8 6 LEU L 33 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 AA8 6 ARG L 45 TYR L 49 -1 O ARG L 45 N GLN L 37 SHEET 6 AA8 6 THR L 53 ARG L 54 -1 O THR L 53 N TYR L 49 SHEET 1 AA9 4 THR L 10 LEU L 13 0 SHEET 2 AA9 4 THR L 102 VAL L 106 1 O GLN L 105 N LEU L 11 SHEET 3 AA9 4 VAL L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AA9 4 PHE L 97 PHE L 98 -1 O PHE L 97 N GLN L 90 SHEET 1 AB1 3 PHE L 118 PHE L 120 0 SHEET 2 AB1 3 THR L 131 PHE L 141 -1 O VAL L 135 N PHE L 120 SHEET 3 AB1 3 TYR L 175 SER L 184 -1 O LEU L 177 N LEU L 138 SHEET 1 AB2 4 LEU L 156 GLN L 157 0 SHEET 2 AB2 4 VAL L 148 VAL L 152 -1 N TRP L 150 O GLN L 157 SHEET 3 AB2 4 VAL L 193 VAL L 198 -1 O GLU L 197 N GLN L 149 SHEET 4 AB2 4 VAL L 207 ASN L 212 -1 O VAL L 207 N VAL L 198 SHEET 1 AB3 5 THR G 6 LEU G 9 0 SHEET 2 AB3 5 CYS G 112 SER G 115 -1 O CYS G 112 N LEU G 9 SHEET 3 AB3 5 ILE G 94 CYS G 106 -1 N VAL G 105 O GLN G 113 SHEET 4 AB3 5 LYS G 20 ARG G 30 -1 N THR G 24 O LEU G 98 SHEET 5 AB3 5 VAL G 81 ARG G 83 0 SHEET 1 AB4 5 LEU G 69 LEU G 71 0 SHEET 2 AB4 5 LYS G 20 ARG G 30 -1 N GLY G 25 O LEU G 70 SHEET 3 AB4 5 ILE G 94 CYS G 106 -1 O LEU G 98 N THR G 24 SHEET 4 AB4 5 THR G 39 PRO G 44 0 SHEET 5 AB4 5 ASN G 138 PHE G 141 1 O SER G 140 N PHE G 42 SHEET 1 AB5 2 HIS G 154 CYS G 158 0 SHEET 2 AB5 2 GLU G 161 CYS G 165 -1 O PHE G 163 N PHE G 156 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.03 SSBOND 2 CYS H 32 CYS H 98 1555 1555 2.03 SSBOND 3 CYS H 140 CYS H 196 1555 1555 2.03 SSBOND 4 CYS L 23 CYS L 88 1555 1555 2.03 SSBOND 5 CYS L 136 CYS L 196 1555 1555 2.03 SSBOND 6 CYS G 11 CYS G 165 1555 1555 2.03 SSBOND 7 CYS G 19 CYS G 158 1555 1555 2.03 SSBOND 8 CYS G 54 CYS G 95 1555 1555 2.03 SSBOND 9 CYS G 106 CYS G 112 1555 1555 2.03 LINK C PCA H 1 N VAL H 2 1555 1555 1.33 LINK ND2 ASN L 72 C1 NAG A 1 1555 1555 1.43 LINK ND2 ASN G 22 C1 NAG G 205 1555 1555 1.44 LINK ND2 ASN G 72 C1 NAG G 207 1555 1555 1.44 LINK ND2 ASN G 166 C1 NAG G 206 1555 1555 1.44 LINK O4 NAG A 1 C1 NAG A 2 1555 1555 1.43 LINK O4 NAG A 2 C1 BMA A 3 1555 1555 1.43 CISPEP 1 PHE H 146 PRO H 147 0 -0.43 CISPEP 2 GLU H 148 PRO H 149 0 -6.16 CISPEP 3 SER L 7 PRO L 8 0 -0.40 CISPEP 4 TYR L 142 PRO L 143 0 -1.41 CRYST1 137.367 137.367 66.188 90.00 90.00 90.00 P 43 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007280 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007280 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015108 0.00000 HETATM 1 N PCA H 1 47.867 70.024 -10.406 1.00 99.88 N HETATM 2 CA PCA H 1 48.597 69.984 -9.139 1.00 79.92 C HETATM 3 CB PCA H 1 48.956 71.431 -8.854 1.00100.38 C HETATM 4 CG PCA H 1 49.375 71.928 -10.259 1.00 93.52 C HETATM 5 CD PCA H 1 48.362 71.213 -11.095 1.00112.75 C HETATM 6 OE PCA H 1 48.012 71.605 -12.204 1.00122.99 O HETATM 7 C PCA H 1 47.802 69.229 -8.096 1.00 66.67 C HETATM 8 O PCA H 1 47.275 68.164 -8.432 1.00 65.30 O HETATM 9 H PCA H 1 46.898 69.884 -10.361 1.00119.86 H HETATM 10 HA PCA H 1 49.447 69.497 -9.143 1.00 95.90 H HETATM 11 HB2 PCA H 1 49.685 71.495 -8.202 1.00120.46 H HETATM 12 HB3 PCA H 1 48.188 71.924 -8.497 1.00120.46 H HETATM 13 HG2 PCA H 1 50.295 71.671 -10.478 1.00112.23 H HETATM 14 HG3 PCA H 1 49.308 72.903 -10.336 1.00112.23 H