HEADER OXIDOREDUCTASE 27-JAN-20 6VLX TITLE CRYSTAL STRUCTURE OF FABI FROM ALISTIPES FINEGOLDII COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH]; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.3.1.9; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ALISTIPES FINEGOLDII; SOURCE 3 ORGANISM_TAXID: 214856; SOURCE 4 GENE: FABI, ERS852447_01935; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENOYL-ACP REDUCTASE, FABI, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR C.D.RADKA,J.SEETHARAMAN,C.O.ROCK REVDAT 4 11-OCT-23 6VLX 1 REMARK REVDAT 3 10-JUN-20 6VLX 1 JRNL REVDAT 2 06-MAY-20 6VLX 1 JRNL REVDAT 1 29-APR-20 6VLX 0 JRNL AUTH C.D.RADKA,M.W.FRANK,J.YAO,J.SEETHARAMAN,D.J.MILLER,C.O.ROCK JRNL TITL THE GENOME OF A BACTEROIDETES INHABITANT OF THE HUMAN GUT JRNL TITL 2 ENCODES A STRUCTURALLY DISTINCT ENOYL-ACYL CARRIER PROTEIN JRNL TITL 3 REDUCTASE (FABI). JRNL REF J.BIOL.CHEM. V. 295 7635 2020 JRNL REFN ESSN 1083-351X JRNL PMID 32317282 JRNL DOI 10.1074/JBC.RA120.013336 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 59692 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3142 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.73 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3710 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.3120 REMARK 3 BIN FREE R VALUE SET COUNT : 179 REMARK 3 BIN FREE R VALUE : 0.3180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4113 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 399 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.120 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.119 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.104 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.377 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4185 ; 0.006 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3910 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5633 ; 1.380 ; 1.637 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9041 ; 1.287 ; 1.582 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 526 ; 7.130 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 216 ;32.455 ;22.130 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 745 ;15.023 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;17.154 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 554 ; 0.061 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4699 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 897 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6VLX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1000246626. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9790 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL - LIQUID NITROGEN REMARK 200 COOLED REMARK 200 OPTICS : SI 111. ROSENBAUM-ROCK DOUBLE REMARK 200 -CRYSTAL MONOCHROMATOR: LIQUID REMARK 200 NITROGEN COOLED; SAGITALLY REMARK 200 FOCUSING 2ND CRYSTAL, ROSENBAUM- REMARK 200 ROCK VERTICAL FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62918 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.720 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2P91 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALLIZATION: 1.2 M NA K TARTRATE, REMARK 280 100 MM TRIS PH 8.0, CRYO: 1.3M NA K TARTRATE, 100 MM TRIS PH 8.0, REMARK 280 20% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 30.27850 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.78050 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 30.27850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 63.78050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -116.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 688 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 440 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 THR A 197 REMARK 465 PRO A 198 REMARK 465 THR A 199 REMARK 465 THR A 200 REMARK 465 ALA A 201 REMARK 465 GLY A 202 REMARK 465 SER A 203 REMARK 465 GLY A 204 REMARK 465 VAL A 205 REMARK 465 LEU A 206 REMARK 465 GLY A 207 REMARK 465 MET A 208 REMARK 465 GLY A 209 REMARK 465 ASP A 276 REMARK 465 VAL A 277 REMARK 465 HIS A 278 REMARK 465 GLN A 279 REMARK 465 ASN A 280 REMARK 465 GLN A 281 REMARK 465 TYR A 282 REMARK 465 PRO A 283 REMARK 465 PHE A 284 REMARK 465 GLY A 285 REMARK 465 GLU A 286 REMARK 465 ASN A 287 REMARK 465 ALA A 288 REMARK 465 GLU A 289 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 THR B 200 REMARK 465 ALA B 201 REMARK 465 GLY B 202 REMARK 465 SER B 203 REMARK 465 GLY B 204 REMARK 465 VAL B 205 REMARK 465 VAL B 277 REMARK 465 HIS B 278 REMARK 465 GLN B 279 REMARK 465 ASN B 280 REMARK 465 GLN B 281 REMARK 465 TYR B 282 REMARK 465 PRO B 283 REMARK 465 PHE B 284 REMARK 465 GLY B 285 REMARK 465 GLU B 286 REMARK 465 ASN B 287 REMARK 465 ALA B 288 REMARK 465 GLU B 289 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 20 CG CD OE1 NE2 REMARK 470 LEU B 206 CG CD1 CD2 REMARK 470 MET B 208 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 109 45.07 -143.66 REMARK 500 ALA A 123 -62.89 -137.35 REMARK 500 ASN A 161 -143.80 74.59 REMARK 500 GLU A 184 -73.05 -84.22 REMARK 500 ASP A 252 15.88 -151.29 REMARK 500 LEU B 6 41.71 -107.32 REMARK 500 ASN B 59 -142.80 44.66 REMARK 500 THR B 60 -176.50 65.17 REMARK 500 ASP B 109 47.05 -149.81 REMARK 500 ALA B 123 -60.55 -137.62 REMARK 500 ASP B 137 58.56 39.23 REMARK 500 ASN B 161 -140.68 70.88 REMARK 500 MET B 208 -133.93 -100.93 REMARK 500 ASP B 252 14.08 -153.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 723 DISTANCE = 5.81 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 401 DBREF1 6VLX A 1 289 UNP A0A174E195_9BACT DBREF2 6VLX A A0A174E195 1 289 DBREF1 6VLX B 1 289 UNP A0A174E195_9BACT DBREF2 6VLX B A0A174E195 1 289 SEQADV 6VLX MET A -19 UNP A0A174E19 INITIATING METHIONINE SEQADV 6VLX GLY A -18 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX SER A -17 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX SER A -16 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX HIS A -15 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX HIS A -14 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX HIS A -13 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX HIS A -12 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX HIS A -11 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX HIS A -10 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX SER A -9 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX SER A -8 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX GLY A -7 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX LEU A -6 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX VAL A -5 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX PRO A -4 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX ARG A -3 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX GLY A -2 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX SER A -1 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX HIS A 0 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX MET B -19 UNP A0A174E19 INITIATING METHIONINE SEQADV 6VLX GLY B -18 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX SER B -17 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX SER B -16 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX HIS B -15 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX HIS B -14 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX HIS B -13 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX HIS B -12 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX HIS B -11 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX HIS B -10 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX SER B -9 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX SER B -8 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX GLY B -7 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX LEU B -6 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX VAL B -5 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX PRO B -4 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX ARG B -3 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX GLY B -2 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX SER B -1 UNP A0A174E19 EXPRESSION TAG SEQADV 6VLX HIS B 0 UNP A0A174E19 EXPRESSION TAG SEQRES 1 A 309 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 309 LEU VAL PRO ARG GLY SER HIS MET ALA TYR ASN LEU LEU SEQRES 3 A 309 LYS GLY LYS LYS GLY LEU ILE PHE GLY ALA LEU ASN GLU SEQRES 4 A 309 GLN SER ILE ALA TRP LYS VAL ALA GLU ARG ALA VAL GLU SEQRES 5 A 309 GLU GLY ALA GLU ILE VAL LEU THR ASN THR ALA VAL SER SEQRES 6 A 309 ILE ARG MET GLY THR ILE GLY ARG LEU ALA GLU LYS CYS SEQRES 7 A 309 ASN THR ILE VAL VAL PRO ALA ASP ALA THR SER VAL GLU SEQRES 8 A 309 ASP LEU GLU ASN LEU ILE ASP LYS THR MET GLU HIS PHE SEQRES 9 A 309 GLY GLY LYS PHE ASP PHE MET LEU HIS SER ILE GLY MET SEQRES 10 A 309 SER PRO ASN VAL ARG LYS GLY ARG THR TYR ASP ASP LEU SEQRES 11 A 309 ASP TYR ASP TYR LEU SER LYS THR LEU ASP ILE SER ALA SEQRES 12 A 309 ILE SER PHE HIS LYS ALA ILE GLN VAL ALA ARG LYS LYS SEQRES 13 A 309 ASP ALA ILE ASN ASP TRP GLY SER ILE VAL ALA LEU SER SEQRES 14 A 309 TYR ILE ALA ALA GLN ARG THR LEU TYR GLY TYR ASN ASP SEQRES 15 A 309 MET ALA ASP ALA LYS ALA LEU LEU GLU SER ILE ALA ARG SEQRES 16 A 309 SER PHE GLY TYR ILE TYR GLY ARG GLU LYS HIS VAL ARG SEQRES 17 A 309 ILE ASN THR VAL SER GLN SER PRO THR PRO THR THR ALA SEQRES 18 A 309 GLY SER GLY VAL LEU GLY MET GLY ASP LEU MET ASN PHE SEQRES 19 A 309 ALA GLU ASN MET SER PRO LEU GLY ASN ALA SER ALA ASN SEQRES 20 A 309 ASP CYS ALA ASP TYR VAL LEU THR LEU PHE SER ASP LEU SEQRES 21 A 309 THR ARG LYS VAL THR MET GLN ASN LEU TYR HIS ASP GLY SEQRES 22 A 309 GLY PHE ALA SER MET GLY MET SER ARG ARG ALA MET LYS SEQRES 23 A 309 THR TYR GLU LYS GLY MET ARG PHE GLU ASP VAL HIS GLN SEQRES 24 A 309 ASN GLN TYR PRO PHE GLY GLU ASN ALA GLU SEQRES 1 B 309 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 309 LEU VAL PRO ARG GLY SER HIS MET ALA TYR ASN LEU LEU SEQRES 3 B 309 LYS GLY LYS LYS GLY LEU ILE PHE GLY ALA LEU ASN GLU SEQRES 4 B 309 GLN SER ILE ALA TRP LYS VAL ALA GLU ARG ALA VAL GLU SEQRES 5 B 309 GLU GLY ALA GLU ILE VAL LEU THR ASN THR ALA VAL SER SEQRES 6 B 309 ILE ARG MET GLY THR ILE GLY ARG LEU ALA GLU LYS CYS SEQRES 7 B 309 ASN THR ILE VAL VAL PRO ALA ASP ALA THR SER VAL GLU SEQRES 8 B 309 ASP LEU GLU ASN LEU ILE ASP LYS THR MET GLU HIS PHE SEQRES 9 B 309 GLY GLY LYS PHE ASP PHE MET LEU HIS SER ILE GLY MET SEQRES 10 B 309 SER PRO ASN VAL ARG LYS GLY ARG THR TYR ASP ASP LEU SEQRES 11 B 309 ASP TYR ASP TYR LEU SER LYS THR LEU ASP ILE SER ALA SEQRES 12 B 309 ILE SER PHE HIS LYS ALA ILE GLN VAL ALA ARG LYS LYS SEQRES 13 B 309 ASP ALA ILE ASN ASP TRP GLY SER ILE VAL ALA LEU SER SEQRES 14 B 309 TYR ILE ALA ALA GLN ARG THR LEU TYR GLY TYR ASN ASP SEQRES 15 B 309 MET ALA ASP ALA LYS ALA LEU LEU GLU SER ILE ALA ARG SEQRES 16 B 309 SER PHE GLY TYR ILE TYR GLY ARG GLU LYS HIS VAL ARG SEQRES 17 B 309 ILE ASN THR VAL SER GLN SER PRO THR PRO THR THR ALA SEQRES 18 B 309 GLY SER GLY VAL LEU GLY MET GLY ASP LEU MET ASN PHE SEQRES 19 B 309 ALA GLU ASN MET SER PRO LEU GLY ASN ALA SER ALA ASN SEQRES 20 B 309 ASP CYS ALA ASP TYR VAL LEU THR LEU PHE SER ASP LEU SEQRES 21 B 309 THR ARG LYS VAL THR MET GLN ASN LEU TYR HIS ASP GLY SEQRES 22 B 309 GLY PHE ALA SER MET GLY MET SER ARG ARG ALA MET LYS SEQRES 23 B 309 THR TYR GLU LYS GLY MET ARG PHE GLU ASP VAL HIS GLN SEQRES 24 B 309 ASN GLN TYR PRO PHE GLY GLU ASN ALA GLU HET GOL A 401 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *399(H2 O) HELIX 1 AA1 SER A 21 GLU A 33 1 13 HELIX 2 AA2 THR A 42 MET A 48 1 7 HELIX 3 AA3 GLY A 49 CYS A 58 1 10 HELIX 4 AA4 SER A 69 GLY A 85 1 17 HELIX 5 AA5 SER A 98 LYS A 103 1 6 HELIX 6 AA6 THR A 106 LEU A 110 5 5 HELIX 7 AA7 ASP A 111 ALA A 123 1 13 HELIX 8 AA8 ALA A 123 LYS A 136 1 14 HELIX 9 AA9 TYR A 150 GLN A 154 5 5 HELIX 10 AB1 ASP A 162 HIS A 186 1 25 HELIX 11 AB2 LEU A 211 SER A 219 1 9 HELIX 12 AB3 SER A 225 SER A 238 1 14 HELIX 13 AB4 ASP A 239 ARG A 242 5 4 HELIX 14 AB5 GLY A 254 MET A 258 5 5 HELIX 15 AB6 SER A 261 GLU A 275 1 15 HELIX 16 AB7 SER B 21 GLU B 33 1 13 HELIX 17 AB8 THR B 42 MET B 48 1 7 HELIX 18 AB9 THR B 50 GLY B 52 5 3 HELIX 19 AC1 ARG B 53 CYS B 58 1 6 HELIX 20 AC2 SER B 69 GLY B 85 1 17 HELIX 21 AC3 SER B 98 LYS B 103 1 6 HELIX 22 AC4 THR B 106 LEU B 110 5 5 HELIX 23 AC5 ASP B 111 ALA B 123 1 13 HELIX 24 AC6 ALA B 123 LYS B 136 1 14 HELIX 25 AC7 TYR B 150 GLN B 154 5 5 HELIX 26 AC8 ASN B 161 HIS B 186 1 26 HELIX 27 AC9 MET B 208 SER B 219 1 12 HELIX 28 AD1 SER B 225 SER B 238 1 14 HELIX 29 AD2 ASP B 239 ARG B 242 5 4 HELIX 30 AD3 GLY B 254 MET B 258 5 5 HELIX 31 AD4 SER B 261 PHE B 274 1 14 SHEET 1 AA1 7 VAL A 62 PRO A 64 0 SHEET 2 AA1 7 GLU A 36 ASN A 41 1 N LEU A 39 O VAL A 63 SHEET 3 AA1 7 LYS A 10 PHE A 14 1 N ILE A 13 O VAL A 38 SHEET 4 AA1 7 PHE A 88 HIS A 93 1 O ASP A 89 N LYS A 10 SHEET 5 AA1 7 ILE A 139 SER A 149 1 O ASN A 140 N PHE A 88 SHEET 6 AA1 7 ARG A 188 GLN A 194 1 O VAL A 192 N SER A 149 SHEET 7 AA1 7 ASN A 248 HIS A 251 1 O LEU A 249 N THR A 191 SHEET 1 AA2 7 VAL B 62 PRO B 64 0 SHEET 2 AA2 7 ALA B 35 ASN B 41 1 N LEU B 39 O VAL B 63 SHEET 3 AA2 7 LYS B 9 PHE B 14 1 N ILE B 13 O VAL B 38 SHEET 4 AA2 7 PHE B 88 HIS B 93 1 O ASP B 89 N LYS B 10 SHEET 5 AA2 7 ILE B 139 SER B 149 1 O VAL B 146 N HIS B 93 SHEET 6 AA2 7 ARG B 188 GLN B 194 1 O VAL B 192 N SER B 149 SHEET 7 AA2 7 ASN B 248 HIS B 251 1 O LEU B 249 N THR B 191 SITE 1 AC1 10 THR A 156 LEU A 157 GLY A 159 TYR A 160 SITE 2 AC1 10 ASN A 161 ALA A 164 HOH A 529 SER B 176 SITE 3 AC1 10 TYR B 179 ILE B 180 CRYST1 60.557 77.772 127.561 90.00 90.00 90.00 P 21 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016513 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012858 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007839 0.00000