HEADER HYDROLASE 27-JAN-20 6VM5 TITLE STRUCTURE OF MORAXELLA OSLOENSIS CAP4 SAVED/CARF-DOMAIN CONTAINING TITLE 2 RECEPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: SAVED DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CAP4; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MORAXELLA OSLOENSIS; SOURCE 3 ORGANISM_TAXID: 34062; SOURCE 4 GENE: FEF33_11620, MOTT16_09860; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEASE, DUF4297, SAVED, CARF, PHAGE IMMUNITY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.LOWEY,A.T.WHITELEY,A.F.A.KESZEI,B.R.MOREHOUSE,S.P.ANTINE,V.CABRERA, AUTHOR 2 F.SCHWEDE,J.J.MEKALANOS,S.SHAO,A.S.Y.LEE,P.J.KRANZUSCH REVDAT 5 03-APR-24 6VM5 1 REMARK REVDAT 4 06-MAR-24 6VM5 1 REMARK REVDAT 3 22-JUL-20 6VM5 1 JRNL REVDAT 2 01-JUL-20 6VM5 1 JRNL REVDAT 1 17-JUN-20 6VM5 0 JRNL AUTH B.LOWEY,A.T.WHITELEY,A.F.A.KESZEI,B.R.MOREHOUSE,I.T.MATHEWS, JRNL AUTH 2 S.P.ANTINE,V.J.CABRERA,D.KASHIN,P.NIEMANN,M.JAIN,F.SCHWEDE, JRNL AUTH 3 J.J.MEKALANOS,S.SHAO,A.S.Y.LEE,P.J.KRANZUSCH JRNL TITL CBASS IMMUNITY USES CARF-RELATED EFFECTORS TO SENSE 3'-5'- JRNL TITL 2 AND 2'-5'-LINKED CYCLIC OLIGONUCLEOTIDE SIGNALS AND PROTECT JRNL TITL 3 BACTERIA FROM PHAGE INFECTION. JRNL REF CELL V. 182 38 2020 JRNL REFN ISSN 1097-4172 JRNL PMID 32544385 JRNL DOI 10.1016/J.CELL.2020.05.019 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 37711 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.310 REMARK 3 FREE R VALUE TEST SET COUNT : 2004 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.3600 - 5.6600 1.00 2662 156 0.1912 0.2034 REMARK 3 2 5.6600 - 4.4900 1.00 2592 144 0.1678 0.2079 REMARK 3 3 4.4900 - 3.9300 1.00 2583 142 0.1697 0.1977 REMARK 3 4 3.9300 - 3.5700 1.00 2577 143 0.1936 0.2194 REMARK 3 5 3.5700 - 3.3100 1.00 2552 142 0.2105 0.2221 REMARK 3 6 3.3100 - 3.1200 1.00 2559 145 0.2206 0.2417 REMARK 3 7 3.1200 - 2.9600 1.00 2555 147 0.2400 0.2808 REMARK 3 8 2.9600 - 2.8300 1.00 2530 145 0.2522 0.3087 REMARK 3 9 2.8300 - 2.7200 1.00 2539 138 0.2503 0.2872 REMARK 3 10 2.7200 - 2.6300 1.00 2543 147 0.2627 0.2653 REMARK 3 11 2.6300 - 2.5500 1.00 2524 142 0.2809 0.3370 REMARK 3 12 2.5500 - 2.4700 1.00 2560 136 0.3102 0.3477 REMARK 3 13 2.4700 - 2.4100 1.00 2518 138 0.3393 0.3673 REMARK 3 14 2.4100 - 2.3500 0.96 2413 139 0.3647 0.4373 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.408 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.361 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 59.42 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 83.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3454 REMARK 3 ANGLE : 0.710 4657 REMARK 3 CHIRALITY : 0.047 514 REMARK 3 PLANARITY : 0.005 600 REMARK 3 DIHEDRAL : 6.306 2069 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 321 THROUGH 356 ) REMARK 3 ORIGIN FOR THE GROUP (A): -55.4751 16.5010 -19.5271 REMARK 3 T TENSOR REMARK 3 T11: 1.1483 T22: 0.8879 REMARK 3 T33: 0.6826 T12: -0.3583 REMARK 3 T13: -0.0048 T23: 0.0419 REMARK 3 L TENSOR REMARK 3 L11: 2.1781 L22: 0.8033 REMARK 3 L33: 1.3562 L12: -1.0139 REMARK 3 L13: -0.6503 L23: -0.6029 REMARK 3 S TENSOR REMARK 3 S11: -0.0003 S12: -0.4216 S13: -1.0586 REMARK 3 S21: -0.7074 S22: 0.0244 S23: -0.3873 REMARK 3 S31: 1.2530 S32: -0.4597 S33: -0.0186 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 357 THROUGH 463 ) REMARK 3 ORIGIN FOR THE GROUP (A): -63.9275 18.2696 -23.3090 REMARK 3 T TENSOR REMARK 3 T11: 0.9058 T22: 0.5011 REMARK 3 T33: 0.4758 T12: -0.3311 REMARK 3 T13: -0.0442 T23: 0.0537 REMARK 3 L TENSOR REMARK 3 L11: 1.5158 L22: 1.7688 REMARK 3 L33: 1.2126 L12: -0.3156 REMARK 3 L13: -0.4071 L23: -0.7175 REMARK 3 S TENSOR REMARK 3 S11: -0.2817 S12: 0.0650 S13: -0.3906 REMARK 3 S21: -0.4513 S22: 0.3442 S23: 0.2917 REMARK 3 S31: 0.2127 S32: 0.2243 S33: -0.0593 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 15 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.8909 65.2134 -21.3200 REMARK 3 T TENSOR REMARK 3 T11: 0.4542 T22: 0.4550 REMARK 3 T33: 0.3649 T12: -0.1811 REMARK 3 T13: -0.0752 T23: -0.0234 REMARK 3 L TENSOR REMARK 3 L11: 2.3743 L22: 1.4268 REMARK 3 L33: 1.0110 L12: -0.7777 REMARK 3 L13: 0.7819 L23: 0.8467 REMARK 3 S TENSOR REMARK 3 S11: -0.0515 S12: -0.2040 S13: -0.0009 REMARK 3 S21: -0.1031 S22: -0.0048 S23: -0.0958 REMARK 3 S31: -0.0261 S32: -0.2671 S33: 0.2198 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 191 ) REMARK 3 ORIGIN FOR THE GROUP (A): -53.7662 64.5764 -11.7973 REMARK 3 T TENSOR REMARK 3 T11: 0.5532 T22: 0.7499 REMARK 3 T33: 0.3571 T12: -0.1051 REMARK 3 T13: 0.0619 T23: -0.0956 REMARK 3 L TENSOR REMARK 3 L11: 1.8140 L22: 2.6630 REMARK 3 L33: 2.4515 L12: 0.8396 REMARK 3 L13: 1.8138 L23: -0.3203 REMARK 3 S TENSOR REMARK 3 S11: -0.3337 S12: -0.9110 S13: 0.2263 REMARK 3 S21: 0.8182 S22: 0.0413 S23: 0.2765 REMARK 3 S31: -0.1687 S32: -0.9268 S33: 0.1184 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 192 THROUGH 320 ) REMARK 3 ORIGIN FOR THE GROUP (A): -50.3967 42.0001 -24.0444 REMARK 3 T TENSOR REMARK 3 T11: 0.6645 T22: 0.4689 REMARK 3 T33: 0.5346 T12: -0.2643 REMARK 3 T13: 0.0036 T23: -0.0886 REMARK 3 L TENSOR REMARK 3 L11: 0.4775 L22: 1.3991 REMARK 3 L33: 0.2830 L12: 0.9725 REMARK 3 L13: 0.5237 L23: -0.3871 REMARK 3 S TENSOR REMARK 3 S11: -0.0268 S12: 0.0107 S13: -0.0460 REMARK 3 S21: -0.3319 S22: 0.1495 S23: -0.1180 REMARK 3 S31: 0.2898 S32: 0.0052 S33: 0.2292 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6VM5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1000246658. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-MAY-19 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99998 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37860 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.340 REMARK 200 RESOLUTION RANGE LOW (A) : 49.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 11.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.34 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.4 REMARK 200 DATA REDUNDANCY IN SHELL : 10.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: UNPUBLISHED SE-MET VERSION OF THE SAME PROTEIN REMARK 200 DETERMIED BY SAD PHASING REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 110 MM TRIS-HCL PH 8.5, 21% PEG-400, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.21200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 21.10600 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 21.10600 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 42.21200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ALA A 3 REMARK 465 SER A 4 REMARK 465 LEU A 5 REMARK 465 LEU A 6 REMARK 465 GLU A 7 REMARK 465 LYS A 8 REMARK 465 GLN A 9 REMARK 465 SER A 10 REMARK 465 THR A 11 REMARK 465 GLY A 12 REMARK 465 GLY A 13 REMARK 465 ALA A 14 REMARK 465 GLY A 123 REMARK 465 VAL A 124 REMARK 465 GLY A 125 REMARK 465 SER A 126 REMARK 465 SER A 127 REMARK 465 TYR A 128 REMARK 465 SER A 129 REMARK 465 ALA A 130 REMARK 465 ASP A 131 REMARK 465 SER A 132 REMARK 465 VAL A 133 REMARK 465 ALA A 245 REMARK 465 SER A 246 REMARK 465 SER A 247 REMARK 465 LYS A 370 REMARK 465 ASP A 371 REMARK 465 ILE A 372 REMARK 465 ASP A 373 REMARK 465 SER A 374 REMARK 465 THR A 375 REMARK 465 ILE A 376 REMARK 465 ASN A 377 REMARK 465 GLU A 378 REMARK 465 ILE A 379 REMARK 465 LYS A 380 REMARK 465 GLU A 416 REMARK 465 ASN A 417 REMARK 465 LYS A 418 REMARK 465 LEU A 419 REMARK 465 ILE A 464 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 50 O HOH A 601 1.90 REMARK 500 O HOH A 657 O HOH A 660 2.04 REMARK 500 O HOH A 609 O HOH A 655 2.09 REMARK 500 NH1 ARG A 216 OE2 GLU A 220 2.11 REMARK 500 NE ARG A 193 O HOH A 602 2.13 REMARK 500 O TYR A 312 OG SER A 315 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 45 74.53 -150.68 REMARK 500 GLU A 59 -81.71 -96.07 REMARK 500 LEU A 185 58.58 -111.10 REMARK 500 GLU A 228 -126.48 50.95 REMARK 500 ASN A 348 137.03 -38.07 REMARK 500 LEU A 352 140.65 -174.92 REMARK 500 ASN A 441 44.20 -77.52 REMARK 500 THR A 459 -116.92 -126.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 634 O REMARK 620 2 HOH A 662 O 73.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 501 DBREF1 6VM5 A 1 464 UNP A0A2K8K5C5_9GAMM DBREF2 6VM5 A A0A2K8K5C5 1 464 SEQADV 6VM5 SER A 0 UNP A0A2K8K5C EXPRESSION TAG SEQRES 1 A 465 SER MET SER ALA SER LEU LEU GLU LYS GLN SER THR GLY SEQRES 2 A 465 GLY ALA ILE ALA ARG VAL GLY PHE GLU TYR GLN ASP ALA SEQRES 3 A 465 PHE VAL LEU LYS ASN LEU PRO LEU TRP LEU SER GLU SER SEQRES 4 A 465 ALA PHE SER HIS ILE VAL SER GLU SER ILE GLY ASP VAL SEQRES 5 A 465 GLU VAL CYS TYR PHE SER LEU GLU LYS ASP PHE GLN ARG SEQRES 6 A 465 VAL MET TYR GLU ALA LYS ASN HIS SER LEU THR SER THR SEQRES 7 A 465 ASP PHE TRP LYS GLU ILE LYS ARG PHE LYS GLU ALA PHE SEQRES 8 A 465 ASP ILE PRO SER SER GLU PHE THR ARG PHE GLY LEU VAL SEQRES 9 A 465 CYS PRO LEU TYR THR SER THR LEU HIS PRO PHE LEU ALA SEQRES 10 A 465 GLN ILE GLU ARG ILE ARG GLY VAL GLY SER SER TYR SER SEQRES 11 A 465 ALA ASP SER VAL ILE LEU GLN LYS SER ARG GLN ASP ILE SEQRES 12 A 465 THR GLN TRP CYS SER ASP LYS GLY PHE GLU THR SER LEU SEQRES 13 A 465 ALA GLU PHE ALA LEU ASP HIS VAL ASP PHE LEU SER PHE SEQRES 14 A 465 ASN ALA GLU ASP SER ASP SER VAL PHE ILE GLY GLU ILE SEQRES 15 A 465 GLU GLU LYS LEU SER ASN ILE GLU LEU THR THR ARG LYS SEQRES 16 A 465 ALA LYS GLN LEU ARG ASP GLN PHE LYS ASN LEU ILE SER SEQRES 17 A 465 ARG SER SER PHE GLY PRO ILE HIS ARG LYS ASP PHE GLU SEQRES 18 A 465 ASN PHE ILE CYS HIS ALA LEU GLU GLU ASP ARG THR GLN SEQRES 19 A 465 TRP LEU SER ASP PRO ILE LYS ILE ASN LEU SER ALA SER SEQRES 20 A 465 SER SER GLN HIS GLN ASP LEU ASN LEU ASP ILE SER ASP SEQRES 21 A 465 PHE ASN GLY PRO ASP ARG ALA GLN LYS THR SER SER ASP SEQRES 22 A 465 TRP ASN SER LEU ILE LYS LYS ALA VAL SER ILE GLY ASP SEQRES 23 A 465 PHE ILE HIS ASN SER GLY ASP ARG ARG THR LEU LEU ILE SEQRES 24 A 465 ASP GLY LYS GLN ARG MET SER THR ALA CYS MET LEU GLY SEQRES 25 A 465 TYR VAL PHE SER ALA THR ARG ASN PHE LEU LEU GLU ILE SEQRES 26 A 465 GLU HIS ASN GLY LEU ALA TYR ARG THR ASP ASP HIS LYS SEQRES 27 A 465 GLN LYS GLU GLY GLN PHE PHE ASN LYS THR ASN SER ILE SEQRES 28 A 465 GLU LEU HIS GLY LYS THR GLU ALA ILE VAL THR ILE GLY SEQRES 29 A 465 PHE PRO THR ALA ILE GLY LYS ASP ILE ASP SER THR ILE SEQRES 30 A 465 ASN GLU ILE LYS ASN LEU PRO ARG LEU ASN LEU GLU SER SEQRES 31 A 465 SER ASN VAL ILE ASP ASN MET GLU THR LEU ASN LEU ALA SEQRES 32 A 465 VAL LYS GLU ALA LYS SER ALA LEU VAL SER PHE LYS ALA SEQRES 33 A 465 GLU ASN LYS LEU SER LYS LEU HIS LEU PHE ILE LYS ALA SEQRES 34 A 465 PRO SER VAL PHE ALA MET VAL LEU GLY HIS ARG LEU ASN SEQRES 35 A 465 GLY VAL CYS ASN ILE GLN LEU TYR ASP TRP VAL ASN GLY SEQRES 36 A 465 GLU TYR MET PRO THR ALA GLU LEU ASN ILE HET MG A 501 1 HETNAM MG MAGNESIUM ION FORMUL 2 MG MG 2+ FORMUL 3 HOH *67(H2 O) HELIX 1 AA1 PHE A 20 SER A 36 1 17 HELIX 2 AA2 THR A 75 ILE A 92 1 18 HELIX 3 AA3 THR A 108 THR A 110 5 3 HELIX 4 AA4 LEU A 111 ARG A 122 1 12 HELIX 5 AA5 LEU A 135 LYS A 149 1 15 HELIX 6 AA6 GLU A 152 HIS A 162 1 11 HELIX 7 AA7 ASP A 172 LEU A 185 1 14 HELIX 8 AA8 THR A 191 SER A 207 1 17 HELIX 9 AA9 ARG A 208 GLY A 212 5 5 HELIX 10 AB1 ARG A 216 GLU A 228 1 13 HELIX 11 AB2 ARG A 231 SER A 236 1 6 HELIX 12 AB3 ASP A 264 LYS A 268 5 5 HELIX 13 AB4 THR A 269 SER A 290 1 22 HELIX 14 AB5 ARG A 303 PHE A 314 1 12 HELIX 15 AB6 ASN A 395 PHE A 413 1 19 HELIX 16 AB7 PRO A 429 LEU A 440 1 12 SHEET 1 AA1 6 VAL A 163 SER A 167 0 SHEET 2 AA1 6 PHE A 97 CYS A 104 1 N PHE A 100 O ASP A 164 SHEET 3 AA1 6 PHE A 62 ALA A 69 1 N GLU A 68 O VAL A 103 SHEET 4 AA1 6 ASP A 50 PHE A 56 -1 N TYR A 55 O GLN A 63 SHEET 5 AA1 6 PHE A 40 SER A 47 -1 N VAL A 44 O GLU A 52 SHEET 6 AA1 6 ILE A 214 HIS A 215 -1 O ILE A 214 N ILE A 43 SHEET 1 AA2 4 ILE A 239 LYS A 240 0 SHEET 2 AA2 4 THR A 295 ASP A 299 1 O LEU A 297 N ILE A 239 SHEET 3 AA2 4 LEU A 321 HIS A 326 1 O LEU A 321 N LEU A 296 SHEET 4 AA2 4 LEU A 329 ARG A 332 -1 O TYR A 331 N ILE A 324 SHEET 1 AA3 5 ARG A 384 GLU A 388 0 SHEET 2 AA3 5 GLU A 357 GLY A 363 1 N THR A 361 O LEU A 387 SHEET 3 AA3 5 LYS A 421 LYS A 427 1 O LYS A 427 N ILE A 362 SHEET 4 AA3 5 ILE A 446 VAL A 452 1 O GLN A 447 N LEU A 422 SHEET 5 AA3 5 GLU A 455 LEU A 462 -1 O THR A 459 N LEU A 448 LINK MG MG A 501 O HOH A 634 1555 1555 2.21 LINK MG MG A 501 O HOH A 662 1555 1555 2.09 CISPEP 1 PHE A 364 PRO A 365 0 6.27 SITE 1 AC1 2 HOH A 634 HOH A 662 CRYST1 157.593 157.593 63.318 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006345 0.003664 0.000000 0.00000 SCALE2 0.000000 0.007327 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015793 0.00000