HEADER LIGASE 06-FEB-20 6VR7 TITLE STRUCTURE OF A PSEUDOMUREIN PEPTIDE LIGASE TYPE C FROM METHANOTHERMUS TITLE 2 FERVIDUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: MUR LIGASE MIDDLE DOMAIN PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PSEUDOMUREIN PEPTIDE LIGASE TYPE C; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOTHERMUS FERVIDUS; SOURCE 3 ORGANISM_TAXID: 2180; SOURCE 4 ATCC: 43054; SOURCE 5 GENE: MFER_0336; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 STAR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B_MFER336 KEYWDS PSEUDOMUREIN, PSEUDOMUREIN PEPTIDE LIGASE, ARCHAEAL CELL WALL, KEYWDS 2 METHANOTHERMUS FERVIDUS, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR V.CARBONE,L.R.SCHOFIELD,A.J.SUTHERLAND-SMITH,R.S.RONIMUS,B.P.SUBEDI REVDAT 4 11-OCT-23 6VR7 1 JRNL REVDAT 3 29-SEP-21 6VR7 1 JRNL REVDAT 2 28-JUL-21 6VR7 1 COMPND REMARK HET HETNAM REVDAT 2 2 1 HETSYN FORMUL HELIX SHEET REVDAT 2 3 1 LINK SITE CRYST1 ATOM REVDAT 1 10-FEB-21 6VR7 0 JRNL AUTH B.P.SUBEDI,W.F.MARTIN,V.CARBONE,E.C.DUIN,B.CRONIN,J.SAUTER, JRNL AUTH 2 L.R.SCHOFIELD,A.J.SUTHERLAND-SMITH,R.S.RONIMUS JRNL TITL ARCHAEAL PSEUDOMUREIN AND BACTERIAL MUREIN CELL WALL JRNL TITL 2 BIOSYNTHESIS SHARE A COMMON EVOLUTIONARY ANCESTRY JRNL REF FEMS MICROBES V. 2 2021 JRNL REFN ESSN 2633-6685 JRNL DOI 10.1093/FEMSMC/XTAB012 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 23750 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1173 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.1100 - 5.0000 1.00 3038 147 0.1768 0.2290 REMARK 3 2 5.0000 - 3.9700 1.00 2869 161 0.1615 0.2181 REMARK 3 3 3.9700 - 3.4700 0.97 2745 151 0.2182 0.2673 REMARK 3 4 3.4700 - 3.1500 0.99 2771 155 0.2365 0.3027 REMARK 3 5 3.1500 - 2.9200 1.00 2812 146 0.2378 0.3398 REMARK 3 6 2.9200 - 2.7500 1.00 2782 157 0.2573 0.3855 REMARK 3 7 2.7500 - 2.6100 0.99 2759 118 0.3233 0.4324 REMARK 3 8 2.6100 - 2.5000 1.00 2801 138 0.2555 0.3201 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.690 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.9018 -1.9230 65.1794 REMARK 3 T TENSOR REMARK 3 T11: 0.8355 T22: 0.5669 REMARK 3 T33: 0.3995 T12: -0.1252 REMARK 3 T13: 0.2086 T23: -0.0507 REMARK 3 L TENSOR REMARK 3 L11: 0.6117 L22: 0.5868 REMARK 3 L33: 2.7313 L12: -0.2369 REMARK 3 L13: -0.2798 L23: 0.2697 REMARK 3 S TENSOR REMARK 3 S11: 0.0974 S12: -0.7037 S13: -0.0828 REMARK 3 S21: 0.6448 S22: -0.2475 S23: 0.3152 REMARK 3 S31: 0.1909 S32: -0.4177 S33: 0.1380 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 347 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.0951 5.7981 31.3737 REMARK 3 T TENSOR REMARK 3 T11: 0.2476 T22: 0.2269 REMARK 3 T33: 0.3009 T12: 0.0265 REMARK 3 T13: -0.0156 T23: -0.0677 REMARK 3 L TENSOR REMARK 3 L11: 1.4466 L22: 2.9396 REMARK 3 L33: 1.4022 L12: -0.1286 REMARK 3 L13: 0.2548 L23: -0.9382 REMARK 3 S TENSOR REMARK 3 S11: 0.1030 S12: 0.1188 S13: -0.0489 REMARK 3 S21: -0.0304 S22: -0.1070 S23: 0.1372 REMARK 3 S31: 0.0074 S32: 0.0962 S33: 0.0253 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 348 THROUGH 492 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.1646 18.3360 29.9951 REMARK 3 T TENSOR REMARK 3 T11: 0.3170 T22: 0.2581 REMARK 3 T33: 0.6781 T12: 0.0009 REMARK 3 T13: -0.0515 T23: -0.0326 REMARK 3 L TENSOR REMARK 3 L11: 1.6431 L22: 1.7569 REMARK 3 L33: 1.0983 L12: -0.8025 REMARK 3 L13: -0.4411 L23: 0.0409 REMARK 3 S TENSOR REMARK 3 S11: 0.0576 S12: 0.0631 S13: -0.2566 REMARK 3 S21: -0.0388 S22: -0.0412 S23: 0.3355 REMARK 3 S31: 0.1417 S32: -0.1005 S33: -0.0299 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6VR7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1000244579. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5-6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.911700 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23904 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 46.110 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.14800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 0.95200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA, PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4CVK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 0.1 M BIS-TRIS, REMARK 280 PH 5.5, 25% W/V PEG3350, 0.33% W/V 1,5-NAPHTHALENEDISULFONIC REMARK 280 ACID DISODIUM SALT, 0.33% W/V 2,5-PYRIDINEDICARBOXYLIC ACID, REMARK 280 0.33% W/V3,5-DINITROSALICYLIC ACID, 0.02 M HEPES SODIUM, PH 6.8, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 48.90100 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 48.90100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 69.17550 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 48.90100 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 48.90100 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 69.17550 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 48.90100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.90100 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 69.17550 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 48.90100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.90100 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 69.17550 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 LEU A 3 REMARK 465 LYS A 4 REMARK 465 GLN A 144 REMARK 465 GLY A 145 REMARK 465 ASN A 146 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 5 CG OD1 ND2 REMARK 470 LYS A 7 CG CD CE NZ REMARK 470 ASP A 31 CG OD1 OD2 REMARK 470 ARG A 38 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 39 CG CD CE NZ REMARK 470 LYS A 65 CG CD CE NZ REMARK 470 LYS A 80 CG CD CE NZ REMARK 470 PHE A 169 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR A 315 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 360 CG CD CE NZ REMARK 470 GLU A 478 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 6 -169.75 -121.21 REMARK 500 ASN A 142 31.58 -98.93 REMARK 500 ASN A 173 6.69 59.59 REMARK 500 LEU A 197 38.96 -86.30 REMARK 500 ASN A 233 -146.99 -124.71 REMARK 500 ASN A 235 61.37 -105.98 REMARK 500 LYS A 299 133.35 -174.34 REMARK 500 ASP A 305 -120.80 57.81 REMARK 500 TYR A 359 140.70 -170.87 REMARK 500 ASN A 431 55.58 -101.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 257 SG REMARK 620 2 CYS A 260 SG 117.1 REMARK 620 3 CYS A 279 SG 119.7 94.6 REMARK 620 4 CYS A 281 SG 116.2 103.6 102.3 REMARK 620 N 1 2 3 DBREF 6VR7 A 1 492 UNP E3GXV7 E3GXV7_METFV 1 492 SEQRES 1 A 492 MET GLN LEU LYS ASN LYS LYS ILE VAL VAL ILE GLY GLY SEQRES 2 A 492 CYS GLY THR VAL GLY SER LEU MET ALA ARG ILE LEU LYS SEQRES 3 A 492 SER LYS GLY ASN ASP VAL THR VAL SER ASP ILE ARG LYS SEQRES 4 A 492 ASP THR TYR LEU LYS ASP ILE PHE LYS SER GLU GLY ILE SEQRES 5 A 492 LYS LEU ASP LEU GLY GLY HIS ASP LEU SER LEU ILE LYS SEQRES 6 A 492 LYS ALA ASP ALA ILE ALA ILE ALA PRO SER LEU THR ASN SEQRES 7 A 492 ASN LYS LYS VAL LEU ASN LEU ILE ASN LYS ASN PRO LYS SEQRES 8 A 492 ALA GLU LEU ILE LYS ILE GLU ASP ILE LEU LYS TYR LYS SEQRES 9 A 492 VAL LYS LYS PRO VAL VAL GLY ILE THR GLY THR ASN GLY SEQRES 10 A 492 LYS THR THR THR ARG GLU MET LEU LYS ASN ILE LEU LYS SEQRES 11 A 492 ILE SER GLY LEU GLU VAL PRO GLU HIS HIS LEU ASN ILE SEQRES 12 A 492 GLN GLY ASN THR GLU PHE ILE PRO PRO LEU GLN ALA ARG SEQRES 13 A 492 LEU PRO GLY ASP VAL ALA VAL VAL GLU ILE GLY THR PHE SEQRES 14 A 492 GLY VAL LYS ASN GLU ILE LYS ARG SER ALA LYS ASN SER SEQRES 15 A 492 ASN VAL THR VAL GLY VAL ILE THR ASN ILE SER ARG ASP SEQRES 16 A 492 HIS LEU LYS ASN ILE SER PHE GLN GLU TYR VAL GLU CYS SEQRES 17 A 492 LYS LYS GLU ILE THR GLU VAL ALA LYS LYS LEU VAL LEU SEQRES 18 A 492 ASN ALA ASP ASP PRO ILE VAL ALA SER PHE GLY ASN ASP SEQRES 19 A 492 ASN THR VAL TYR TYR GLY ILE GLU ASN LEU LYS ILE LYS SEQRES 20 A 492 ILE LYS HIS PHE PHE GLU ASP ARG ASP CYS PRO PHE CYS SEQRES 21 A 492 GLY LYS ASN LEU LYS TYR GLU GLU ILE PHE LEU GLY HIS SEQRES 22 A 492 LEU GLY LYS TYR GLU CYS GLU CYS GLY PHE LYS ARG PRO SEQRES 23 A 492 ARG PRO THR VAL LYS ALA ILE ASP VAL GLU ASN LYS LYS SEQRES 24 A 492 PHE ILE LEU SER ILE ASP SER ASN GLU GLY LEU VAL LYS SEQRES 25 A 492 LEU GLU TYR GLY GLY ILE PHE ASN VAL TYR ASN ALA LEU SEQRES 26 A 492 ALA ALA ALA ALA ALA ALA PHE ILE LEU LYS ILE ASP PHE SEQRES 27 A 492 ASP LYS ILE ILE GLU GLY LEU ASN THR PHE LYS LYS VAL SEQRES 28 A 492 PRO GLY ARG MET GLU LYS ILE TYR LYS LYS PRO GLU ILE SEQRES 29 A 492 ILE ILE ASP TYR ALA HIS ASN VAL ALA GLY VAL LYS ALA SEQRES 30 A 492 ILE LEU GLN THR ILE LYS PRO LYS GLY ARG LEU ILE VAL SEQRES 31 A 492 VAL ASN THR ILE SER SER GLU SER GLY ILE LYS GLU ASP SEQRES 32 A 492 ILE LYS ILE ALA LYS ILE LEU SER SER ALA ASP ILE LEU SEQRES 33 A 492 ILE PRO ALA SER TYR SER ALA ARG LYS ALA SER LYS TYR SEQRES 34 A 492 THR ASN THR THR VAL ILE ASN VAL LYS SER THR GLU LYS SEQRES 35 A 492 LYS PHE LYS LYS GLY THR LEU GLY ALA SER LYS PHE GLN SEQRES 36 A 492 VAL GLU GLU ALA ILE LYS LYS ALA LEU SER TYR ALA ASP SEQRES 37 A 492 LYS ASN ASP THR ILE LEU ILE ILE GLY GLU GLY GLY VAL SEQRES 38 A 492 LYS TYR GLY ARG GLU ILE ILE GLU LYS ILE LYS HET SO4 A 501 5 HET SO4 A 502 5 HET ZN A 503 1 HET GOL A 504 6 HET GOL A 505 6 HET AAE A 506 7 HETNAM SO4 SULFATE ION HETNAM ZN ZINC ION HETNAM GOL GLYCEROL HETNAM AAE ACETOACETIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 ZN ZN 2+ FORMUL 5 GOL 2(C3 H8 O3) FORMUL 7 AAE C4 H6 O3 FORMUL 8 HOH *75(H2 O) HELIX 1 AA1 GLY A 15 SER A 27 1 13 HELIX 2 AA2 LEU A 43 GLU A 50 1 8 HELIX 3 AA3 ASP A 60 ALA A 67 1 8 HELIX 4 AA4 PRO A 74 THR A 77 5 4 HELIX 5 AA5 ASN A 79 ASN A 87 1 9 HELIX 6 AA6 ILE A 97 TYR A 103 1 7 HELIX 7 AA7 GLY A 117 SER A 132 1 16 HELIX 8 AA8 PHE A 149 ALA A 155 1 7 HELIX 9 AA9 ASN A 173 ASN A 183 1 11 HELIX 10 AB1 SER A 201 GLU A 211 1 11 HELIX 11 AB2 ILE A 212 VAL A 215 5 4 HELIX 12 AB3 ASP A 225 SER A 230 1 6 HELIX 13 AB4 GLY A 317 LEU A 334 1 18 HELIX 14 AB5 ASP A 337 THR A 347 1 11 HELIX 15 AB6 ASN A 371 ILE A 382 1 12 HELIX 16 AB7 GLY A 399 LEU A 410 1 12 HELIX 17 AB8 SER A 411 ALA A 413 5 3 HELIX 18 AB9 SER A 420 LYS A 428 1 9 HELIX 19 AC1 VAL A 437 GLU A 441 5 5 HELIX 20 AC2 SER A 452 ALA A 467 1 16 HELIX 21 AC3 GLY A 477 LYS A 492 1 16 SHEET 1 AA1 5 LYS A 53 ASP A 55 0 SHEET 2 AA1 5 ASP A 31 SER A 35 1 N VAL A 34 O LYS A 53 SHEET 3 AA1 5 LYS A 7 ILE A 11 1 N ILE A 8 O THR A 33 SHEET 4 AA1 5 ALA A 69 ILE A 72 1 O ALA A 71 N VAL A 9 SHEET 5 AA1 5 GLU A 93 LYS A 96 1 O GLU A 93 N ILE A 70 SHEET 1 AA2 8 ALA A 162 GLU A 165 0 SHEET 2 AA2 8 VAL A 109 THR A 113 1 N VAL A 110 O ALA A 162 SHEET 3 AA2 8 VAL A 186 ILE A 189 1 O VAL A 188 N GLY A 111 SHEET 4 AA2 8 LYS A 218 ASN A 222 1 O VAL A 220 N GLY A 187 SHEET 5 AA2 8 THR A 236 ILE A 241 1 O VAL A 237 N LEU A 219 SHEET 6 AA2 8 VAL A 290 GLU A 296 1 O VAL A 290 N TYR A 238 SHEET 7 AA2 8 LYS A 299 ILE A 304 -1 O ILE A 301 N ILE A 293 SHEET 8 AA2 8 ASN A 307 VAL A 311 -1 O VAL A 311 N PHE A 300 SHEET 1 AA3 2 LYS A 265 LEU A 271 0 SHEET 2 AA3 2 LEU A 274 GLU A 278 -1 O LEU A 274 N PHE A 270 SHEET 1 AA4 6 GLU A 356 LYS A 357 0 SHEET 2 AA4 6 GLU A 363 ASP A 367 -1 O ILE A 366 N GLU A 356 SHEET 3 AA4 6 THR A 472 ILE A 476 1 O ILE A 475 N ILE A 365 SHEET 4 AA4 6 LEU A 388 ASN A 392 1 N ILE A 389 O LEU A 474 SHEET 5 AA4 6 ILE A 415 PRO A 418 1 O ILE A 415 N VAL A 390 SHEET 6 AA4 6 THR A 433 VAL A 434 1 O THR A 433 N LEU A 416 LINK SG CYS A 257 ZN ZN A 503 1555 1555 2.32 LINK SG CYS A 260 ZN ZN A 503 1555 1555 2.31 LINK SG CYS A 279 ZN ZN A 503 1555 1555 2.22 LINK SG CYS A 281 ZN ZN A 503 1555 1555 2.42 CISPEP 1 LYS A 361 PRO A 362 0 0.54 CRYST1 97.802 97.802 138.351 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010225 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010225 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007228 0.00000