HEADER SIGNALING PROTEIN 09-MAR-20 6W3P TITLE CRYSTAL STRUCTURE OF LIGAND-BINDING DOMAIN OF CAMPYLOBACTER JEJUNI TITLE 2 CHEMORECEPTOR TLP3 IN COMPLEX WITH BETA-METHYLNORLEUCINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHYL-ACCEPTING CHEMOTAXIS PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAMPYLOBACTER JEJUNI; SOURCE 3 ORGANISM_TAXID: 197; SOURCE 4 GENE: D8X59_02240; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS BACTERIAL CHEMOTAXIS, CHEMORECEPTOR, DOUBLE CACHE, LIGAND BINDING KEYWDS 2 DOMAIN, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.F.KHAN,M.A.MACHUCA,M.M.RAHMAN,A.ROUJEINIKOVA REVDAT 3 18-OCT-23 6W3P 1 LINK REVDAT 2 27-MAY-20 6W3P 1 JRNL REVDAT 1 20-MAY-20 6W3P 0 JRNL AUTH M.F.KHAN,M.A.MACHUCA,M.M.RAHMAN,C.KOC,R.S.NORTON,B.J.SMITH, JRNL AUTH 2 A.ROUJEINIKOVA JRNL TITL STRUCTURE-ACTIVITY RELATIONSHIP STUDY REVEALS THE MOLECULAR JRNL TITL 2 BASIS FOR SPECIFIC SENSING OF HYDROPHOBIC AMINO ACIDS BY JRNL TITL 3 THECAMPYLOBACTER JEJUNICHEMORECEPTOR TLP3. JRNL REF BIOMOLECULES V. 10 2020 JRNL REFN ESSN 2218-273X JRNL PMID 32403336 JRNL DOI 10.3390/BIOM10050744 REMARK 2 REMARK 2 RESOLUTION. 1.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.8 REMARK 3 NUMBER OF REFLECTIONS : 100208 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.140 REMARK 3 R VALUE (WORKING SET) : 0.138 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 5026 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 4.2944 - 3.4096 0.97 3501 192 0.1356 0.1785 REMARK 3 2 3.4096 - 2.9790 1.00 3570 181 0.1377 0.1993 REMARK 3 3 2.9790 - 2.7067 1.00 3564 192 0.1456 0.1886 REMARK 3 4 2.7067 - 2.5128 0.99 3556 188 0.1421 0.1718 REMARK 3 5 2.5128 - 2.3647 0.97 3478 181 0.1354 0.1971 REMARK 3 6 2.3647 - 2.2463 0.94 3397 166 0.1241 0.1720 REMARK 3 7 2.2463 - 2.1485 0.91 3245 182 0.1246 0.1921 REMARK 3 8 2.1485 - 2.0658 0.89 3160 158 0.1219 0.1692 REMARK 3 9 2.0658 - 1.9945 0.87 3046 194 0.1218 0.1683 REMARK 3 10 1.9945 - 1.9322 0.85 3065 156 0.1183 0.1714 REMARK 3 11 1.9322 - 1.8770 0.85 3013 144 0.1241 0.2072 REMARK 3 12 1.8770 - 1.8275 0.86 3082 150 0.1258 0.1825 REMARK 3 13 1.8275 - 1.7830 0.84 3016 156 0.1302 0.1799 REMARK 3 14 1.7830 - 1.7424 0.85 2997 172 0.1194 0.1867 REMARK 3 15 1.7424 - 1.7054 0.85 3036 166 0.1146 0.1898 REMARK 3 16 1.7054 - 1.6712 0.85 3048 163 0.1161 0.1815 REMARK 3 17 1.6712 - 1.6397 0.85 3024 176 0.1177 0.1917 REMARK 3 18 1.6397 - 1.6104 0.86 3062 158 0.1291 0.1920 REMARK 3 19 1.6104 - 1.5831 0.86 3036 155 0.1360 0.1942 REMARK 3 20 1.5831 - 1.5576 0.88 3155 158 0.1373 0.2076 REMARK 3 21 1.5576 - 1.5336 0.85 3053 155 0.1436 0.1994 REMARK 3 22 1.5336 - 1.5111 0.87 3115 153 0.1409 0.2155 REMARK 3 23 1.5111 - 1.4898 0.87 3125 144 0.1475 0.2057 REMARK 3 24 1.4898 - 1.4697 0.87 3096 160 0.1529 0.2196 REMARK 3 25 1.4697 - 1.4506 0.88 3147 156 0.1648 0.2451 REMARK 3 26 1.4506 - 1.4324 0.87 3095 160 0.1791 0.2255 REMARK 3 27 1.4324 - 1.4152 0.88 3144 185 0.1856 0.2730 REMARK 3 28 1.4152 - 1.3987 0.89 3128 168 0.1883 0.2590 REMARK 3 29 1.3987 - 1.3830 0.85 3047 186 0.1837 0.2350 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.660 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.98 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 4302 REMARK 3 ANGLE : 1.351 5886 REMARK 3 CHIRALITY : 0.105 677 REMARK 3 PLANARITY : 0.018 770 REMARK 3 DIHEDRAL : 14.494 1632 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6W3P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1000247537. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 100314 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.380 REMARK 200 RESOLUTION RANGE LOW (A) : 35.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.1 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.46 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.33300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4XMR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, SODIUM CITRATE AND AMMONIUM REMARK 280 SULPHATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 69.05500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -110.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 37 REMARK 465 ILE A 38 REMARK 465 ASN A 133 REMARK 465 ASP A 134 REMARK 465 ALA A 135 REMARK 465 LYS A 136 REMARK 465 PRO A 286 REMARK 465 ILE A 287 REMARK 465 TYR A 288 REMARK 465 LYS A 289 REMARK 465 ALA A 290 REMARK 465 ASN B 133 REMARK 465 ASP B 134 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 132 OG REMARK 470 LYS A 245 CG CD CE NZ REMARK 470 LYS B 131 CG CD CE NZ REMARK 470 LYS B 136 CG CD CE NZ REMARK 470 LYS B 219 CG CD CE NZ REMARK 470 LYS B 256 CG CD CE NZ REMARK 470 LYS B 268 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 613 O HOH B 687 1.62 REMARK 500 NH2 ARG A 69 O HOH A 401 1.83 REMARK 500 O HOH A 635 O HOH A 713 1.92 REMARK 500 O HOH A 723 O HOH A 768 1.93 REMARK 500 O HOH B 829 O HOH B 832 1.94 REMARK 500 NH1 ARG A 77 O HOH A 402 1.98 REMARK 500 O HOH B 523 O HOH B 731 1.99 REMARK 500 O HOH A 500 O HOH A 713 2.00 REMARK 500 OD1 ASN B 232 O HOH B 401 2.04 REMARK 500 O HOH B 502 O HOH B 531 2.08 REMARK 500 O HOH B 778 O HOH B 807 2.08 REMARK 500 O HOH A 560 O HOH A 734 2.09 REMARK 500 O GLY B 187 O HOH B 402 2.12 REMARK 500 O HOH A 566 O HOH A 707 2.12 REMARK 500 O HOH B 669 O HOH B 697 2.12 REMARK 500 O HOH A 554 O HOH A 744 2.13 REMARK 500 O HOH A 694 O HOH A 703 2.13 REMARK 500 OE2 GLU B 80 NZ LYS B 181 2.13 REMARK 500 O HOH A 462 O HOH A 560 2.13 REMARK 500 OE2 GLU B 80 O HOH B 403 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 723 O HOH B 712 2546 2.03 REMARK 500 O HOH A 446 O HOH A 743 2646 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 270 -127.36 49.57 REMARK 500 PHE B 270 -132.93 54.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ILE B 197 12.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 799 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH A 800 DISTANCE = 6.41 ANGSTROMS REMARK 525 HOH A 801 DISTANCE = 9.50 ANGSTROMS REMARK 525 HOH B 840 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH B 841 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH B 842 DISTANCE = 7.04 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 306 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 71 OG1 REMARK 620 2 HOH A 725 O 94.9 REMARK 620 3 HOH A 733 O 133.4 99.3 REMARK 620 4 HOH A 752 O 109.4 99.0 111.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 307 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 652 O REMARK 620 2 HOH A 738 O 92.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SKJ A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SKJ B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 305 DBREF1 6W3P A 41 290 UNP A0A3X8N4T9_CAMJU DBREF2 6W3P A A0A3X8N4T9 41 290 DBREF1 6W3P B 41 290 UNP A0A3X8N4T9_CAMJU DBREF2 6W3P B A0A3X8N4T9 41 290 SEQADV 6W3P GLY A 37 UNP A0A3X8N4T EXPRESSION TAG SEQADV 6W3P ILE A 38 UNP A0A3X8N4T EXPRESSION TAG SEQADV 6W3P ASP A 39 UNP A0A3X8N4T EXPRESSION TAG SEQADV 6W3P PRO A 40 UNP A0A3X8N4T EXPRESSION TAG SEQADV 6W3P GLY B 37 UNP A0A3X8N4T EXPRESSION TAG SEQADV 6W3P ILE B 38 UNP A0A3X8N4T EXPRESSION TAG SEQADV 6W3P ASP B 39 UNP A0A3X8N4T EXPRESSION TAG SEQADV 6W3P PRO B 40 UNP A0A3X8N4T EXPRESSION TAG SEQRES 1 A 254 GLY ILE ASP PRO PHE THR LYS THR SER LEU TYR GLU SER SEQRES 2 A 254 THR LEU LYS ASN GLN THR ASP LEU LEU LYS VAL THR GLN SEQRES 3 A 254 SER THR VAL GLU ASP PHE ARG SER THR ASN GLN SER PHE SEQRES 4 A 254 THR ARG ALA LEU GLU LYS ASP ILE ALA ASN LEU PRO TYR SEQRES 5 A 254 GLN SER LEU ILE THR GLU GLU ASN ILE ILE ASN ASN VAL SEQRES 6 A 254 GLY PRO ILE LEU LYS TYR TYR ARG HIS SER ILE ASN ALA SEQRES 7 A 254 LEU ASN VAL TYR LEU GLY LEU ASN ASN GLY LYS VAL LEU SEQRES 8 A 254 LEU SER GLN LYS SER ASN ASP ALA LYS MET PRO GLU LEU SEQRES 9 A 254 ARG ASP ASP LEU ASP ILE LYS THR LYS ASP TRP TYR GLN SEQRES 10 A 254 GLU ALA LEU LYS THR ASN ASP ILE PHE VAL THR PRO ALA SEQRES 11 A 254 TYR LEU ASP THR VAL LEU LYS GLN TYR VAL ILE THR TYR SEQRES 12 A 254 SER LYS ALA ILE TYR LYS ASP GLY LYS ILE ILE GLY VAL SEQRES 13 A 254 LEU GLY VAL ASP ILE PRO SER GLU ASP LEU GLN ASN LEU SEQRES 14 A 254 VAL ALA LYS THR PRO GLY ASN THR PHE LEU PHE ASP GLN SEQRES 15 A 254 LYS ASN LYS ILE PHE ALA ALA THR ASN LYS GLU LEU LEU SEQRES 16 A 254 ASN PRO SER ILE ASP HIS SER PRO VAL LEU ASN ALA TYR SEQRES 17 A 254 LYS LEU ASN GLY ASP ASN ASN PHE PHE SER TYR LYS LEU SEQRES 18 A 254 ASN ASN GLU GLU ARG LEU GLY ALA CYS THR LYS VAL PHE SEQRES 19 A 254 ALA TYR THR ALA CYS ILE THR GLU SER ALA ASP ILE ILE SEQRES 20 A 254 ASN LYS PRO ILE TYR LYS ALA SEQRES 1 B 254 GLY ILE ASP PRO PHE THR LYS THR SER LEU TYR GLU SER SEQRES 2 B 254 THR LEU LYS ASN GLN THR ASP LEU LEU LYS VAL THR GLN SEQRES 3 B 254 SER THR VAL GLU ASP PHE ARG SER THR ASN GLN SER PHE SEQRES 4 B 254 THR ARG ALA LEU GLU LYS ASP ILE ALA ASN LEU PRO TYR SEQRES 5 B 254 GLN SER LEU ILE THR GLU GLU ASN ILE ILE ASN ASN VAL SEQRES 6 B 254 GLY PRO ILE LEU LYS TYR TYR ARG HIS SER ILE ASN ALA SEQRES 7 B 254 LEU ASN VAL TYR LEU GLY LEU ASN ASN GLY LYS VAL LEU SEQRES 8 B 254 LEU SER GLN LYS SER ASN ASP ALA LYS MET PRO GLU LEU SEQRES 9 B 254 ARG ASP ASP LEU ASP ILE LYS THR LYS ASP TRP TYR GLN SEQRES 10 B 254 GLU ALA LEU LYS THR ASN ASP ILE PHE VAL THR PRO ALA SEQRES 11 B 254 TYR LEU ASP THR VAL LEU LYS GLN TYR VAL ILE THR TYR SEQRES 12 B 254 SER LYS ALA ILE TYR LYS ASP GLY LYS ILE ILE GLY VAL SEQRES 13 B 254 LEU GLY VAL ASP ILE PRO SER GLU ASP LEU GLN ASN LEU SEQRES 14 B 254 VAL ALA LYS THR PRO GLY ASN THR PHE LEU PHE ASP GLN SEQRES 15 B 254 LYS ASN LYS ILE PHE ALA ALA THR ASN LYS GLU LEU LEU SEQRES 16 B 254 ASN PRO SER ILE ASP HIS SER PRO VAL LEU ASN ALA TYR SEQRES 17 B 254 LYS LEU ASN GLY ASP ASN ASN PHE PHE SER TYR LYS LEU SEQRES 18 B 254 ASN ASN GLU GLU ARG LEU GLY ALA CYS THR LYS VAL PHE SEQRES 19 B 254 ALA TYR THR ALA CYS ILE THR GLU SER ALA ASP ILE ILE SEQRES 20 B 254 ASN LYS PRO ILE TYR LYS ALA HET SKJ A 301 10 HET SO4 A 302 5 HET CL A 303 1 HET CL A 304 1 HET GOL A 305 6 HET NA A 306 1 HET NA A 307 1 HET SKJ B 301 10 HET SO4 B 302 5 HET CL B 303 1 HET CL B 304 1 HET CL B 305 1 HETNAM SKJ BETA-METHYLNORLEUCINE HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN SKJ (2~{S},3~{R})-2-AZANYL-3-METHYL-HEXANOIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SKJ 2(C7 H15 N O2) FORMUL 4 SO4 2(O4 S 2-) FORMUL 5 CL 5(CL 1-) FORMUL 7 GOL C3 H8 O3 FORMUL 8 NA 2(NA 1+) FORMUL 15 HOH *843(H2 O) HELIX 1 AA1 ASP A 39 ASN A 85 1 47 HELIX 2 AA2 PRO A 87 LEU A 91 5 5 HELIX 3 AA3 THR A 93 ASN A 113 1 21 HELIX 4 AA4 ASP A 145 THR A 148 5 4 HELIX 5 AA5 LYS A 149 LEU A 156 1 8 HELIX 6 AA6 SER A 199 THR A 209 1 11 HELIX 7 AA7 ASN A 227 ASN A 232 5 6 HELIX 8 AA8 HIS A 237 GLY A 248 1 12 HELIX 9 AA9 ALA A 280 LYS A 285 1 6 HELIX 10 AB1 ASP B 39 LYS B 43 5 5 HELIX 11 AB2 THR B 44 ASN B 85 1 42 HELIX 12 AB3 PRO B 87 ILE B 92 5 6 HELIX 13 AB4 THR B 93 ASN B 113 1 21 HELIX 14 AB5 ASP B 145 THR B 148 5 4 HELIX 15 AB6 LYS B 149 LYS B 157 1 9 HELIX 16 AB7 SER B 199 THR B 209 1 11 HELIX 17 AB8 ASN B 227 ASN B 232 5 6 HELIX 18 AB9 HIS B 237 LEU B 246 1 10 HELIX 19 AC1 ALA B 280 ASN B 284 1 5 SHEET 1 AA1 6 GLU A 139 ARG A 141 0 SHEET 2 AA1 6 VAL A 126 GLN A 130 -1 N LEU A 128 O GLU A 139 SHEET 3 AA1 6 ASN A 116 GLY A 120 -1 N VAL A 117 O SER A 129 SHEET 4 AA1 6 LYS A 188 PRO A 198 -1 O VAL A 192 N GLY A 120 SHEET 5 AA1 6 TYR A 175 LYS A 185 -1 N ILE A 183 O ILE A 190 SHEET 6 AA1 6 PHE A 162 VAL A 163 -1 N PHE A 162 O SER A 180 SHEET 1 AA2 6 GLU A 139 ARG A 141 0 SHEET 2 AA2 6 VAL A 126 GLN A 130 -1 N LEU A 128 O GLU A 139 SHEET 3 AA2 6 ASN A 116 GLY A 120 -1 N VAL A 117 O SER A 129 SHEET 4 AA2 6 LYS A 188 PRO A 198 -1 O VAL A 192 N GLY A 120 SHEET 5 AA2 6 TYR A 175 LYS A 185 -1 N ILE A 183 O ILE A 190 SHEET 6 AA2 6 TYR A 167 LEU A 168 -1 N TYR A 167 O VAL A 176 SHEET 1 AA3 5 ILE A 222 ALA A 225 0 SHEET 2 AA3 5 THR A 213 PHE A 216 -1 N LEU A 215 O PHE A 223 SHEET 3 AA3 5 TYR A 272 SER A 279 -1 O CYS A 275 N PHE A 214 SHEET 4 AA3 5 GLU A 260 VAL A 269 -1 N THR A 267 O ALA A 274 SHEET 5 AA3 5 PHE A 253 LEU A 257 -1 N PHE A 253 O GLY A 264 SHEET 1 AA4 6 GLU B 139 ARG B 141 0 SHEET 2 AA4 6 VAL B 126 GLN B 130 -1 N VAL B 126 O ARG B 141 SHEET 3 AA4 6 ASN B 116 LEU B 121 -1 N LEU B 119 O LEU B 127 SHEET 4 AA4 6 LYS B 188 PRO B 198 -1 O VAL B 192 N GLY B 120 SHEET 5 AA4 6 TYR B 175 LYS B 185 -1 N ILE B 183 O ILE B 190 SHEET 6 AA4 6 PHE B 162 VAL B 163 -1 N PHE B 162 O SER B 180 SHEET 1 AA5 6 GLU B 139 ARG B 141 0 SHEET 2 AA5 6 VAL B 126 GLN B 130 -1 N VAL B 126 O ARG B 141 SHEET 3 AA5 6 ASN B 116 LEU B 121 -1 N LEU B 119 O LEU B 127 SHEET 4 AA5 6 LYS B 188 PRO B 198 -1 O VAL B 192 N GLY B 120 SHEET 5 AA5 6 TYR B 175 LYS B 185 -1 N ILE B 183 O ILE B 190 SHEET 6 AA5 6 TYR B 167 LEU B 168 -1 N TYR B 167 O VAL B 176 SHEET 1 AA6 5 ILE B 222 ALA B 225 0 SHEET 2 AA6 5 THR B 213 PHE B 216 -1 N LEU B 215 O PHE B 223 SHEET 3 AA6 5 TYR B 272 SER B 279 -1 O THR B 273 N PHE B 216 SHEET 4 AA6 5 GLU B 260 VAL B 269 -1 N THR B 267 O ALA B 274 SHEET 5 AA6 5 PHE B 253 LEU B 257 -1 N PHE B 253 O GLY B 264 SSBOND 1 CYS A 266 CYS A 275 1555 1555 2.09 SSBOND 2 CYS B 266 CYS B 275 1555 1555 2.09 LINK OG1 THR A 71 NA NA A 306 1555 1555 2.69 LINK NA NA A 306 O HOH A 725 1555 1555 2.72 LINK NA NA A 306 O HOH A 733 1555 1555 2.67 LINK NA NA A 306 O HOH A 752 1555 1555 2.73 LINK NA NA A 307 O HOH A 652 1555 1555 3.00 LINK NA NA A 307 O HOH A 738 1555 1555 3.10 SITE 1 AC1 9 TYR A 118 LYS A 149 TRP A 151 TYR A 167 SITE 2 AC1 9 ASP A 169 THR A 170 VAL A 171 ASP A 196 SITE 3 AC1 9 HOH A 460 SITE 1 AC2 6 ARG A 109 HIS A 110 SER A 132 HOH A 416 SITE 2 AC2 6 HOH A 503 HOH A 566 SITE 1 AC3 4 ARG A 69 TYR A 179 HOH A 483 HOH A 618 SITE 1 AC4 4 ARG A 69 HOH A 419 HOH A 664 HOH A 741 SITE 1 AC5 7 ARG A 262 GLU A 278 SER A 279 HOH A 409 SITE 2 AC5 7 HOH A 430 HOH A 626 SER B 234 SITE 1 AC6 5 ASP A 67 THR A 71 HOH A 725 HOH A 733 SITE 2 AC6 5 HOH A 752 SITE 1 AC7 3 ASP A 217 GLN A 218 HOH A 652 SITE 1 AC8 9 TYR B 118 LEU B 128 LYS B 149 TRP B 151 SITE 2 AC8 9 TYR B 167 ASP B 169 THR B 170 VAL B 171 SITE 3 AC8 9 ASP B 196 SITE 1 AC9 7 ARG B 109 HIS B 110 LYS B 131 SER B 132 SITE 2 AC9 7 ALA B 135 HOH B 407 HOH B 432 SITE 1 AD1 5 ASN B 212 LEU B 230 ARG B 262 HOH B 468 SITE 2 AD1 5 HOH B 739 SITE 1 AD2 4 ARG B 109 SER B 129 PRO B 138 HOH B 610 SITE 1 AD3 1 HOH B 422 CRYST1 42.110 138.110 48.790 90.00 94.72 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023747 0.000000 0.001961 0.00000 SCALE2 0.000000 0.007241 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020566 0.00000