HEADER LYASE 16-MAR-20 6W6A TITLE CRYSTAL STRUCTURE OF A PYRIDOXINE 5'-PHOSPHATE SYNTHEASE FROM TITLE 2 STENOTROPHOMONAS MALTOPHILIA K279A COMPND MOL_ID: 1; COMPND 2 MOLECULE: PYRIDOXINE 5'-PHOSPHATE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PNP SYNTHASE; COMPND 5 EC: 2.6.99.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STENOTROPHOMONAS MALTOPHILIA (STRAIN K279A); SOURCE 3 ORGANISM_TAXID: 522373; SOURCE 4 STRAIN: K279A; SOURCE 5 GENE: PDXJ, SMLT0015; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NIAID, NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES, PLP KEYWDS 2 SYNTHESIS, PYRIDOXINE 5-PHOSPHATE PHORPHO LYASE, TRANSFERASE, KEYWDS 3 STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 4 INFECTIOUS DISEASE, SSGCID, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 18-OCT-23 6W6A 1 REMARK REVDAT 1 25-MAR-20 6W6A 0 JRNL AUTH T.E.EDWARDS,P.S.HORANYI,D.D.LORIMER, JRNL AUTH 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL AUTH 3 (SSGCID) JRNL TITL CRYSTAL STRUCTURE OF A PYRIDOXINE 5'-PHOSPHATE SYNTHEASE JRNL TITL 2 FROM STENOTROPHOMONAS MALTOPHILIA K279A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1.3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 27392 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.190 REMARK 3 FREE R VALUE TEST SET COUNT : 1970 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.6100 - 5.9000 0.99 1903 142 0.1513 0.1714 REMARK 3 2 5.9000 - 4.6900 1.00 1851 140 0.1485 0.1838 REMARK 3 3 4.6900 - 4.0900 1.00 1847 136 0.1421 0.1795 REMARK 3 4 4.0900 - 3.7200 0.99 1824 143 0.1813 0.2033 REMARK 3 5 3.7200 - 3.4500 0.99 1828 135 0.2088 0.2579 REMARK 3 6 3.4500 - 3.2500 0.99 1800 146 0.2214 0.2482 REMARK 3 7 3.2500 - 3.0900 0.99 1793 139 0.2470 0.2768 REMARK 3 8 3.0900 - 2.9500 0.99 1804 135 0.2575 0.3253 REMARK 3 9 2.9500 - 2.8400 0.98 1813 129 0.2541 0.3117 REMARK 3 10 2.8400 - 2.7400 0.99 1805 158 0.2443 0.2952 REMARK 3 11 2.7400 - 2.6600 0.98 1740 161 0.2667 0.3262 REMARK 3 12 2.6600 - 2.5800 0.98 1808 134 0.2782 0.3965 REMARK 3 13 2.5800 - 2.5100 0.99 1791 140 0.2853 0.3536 REMARK 3 14 2.5100 - 2.4500 0.98 1815 132 0.3007 0.3392 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.280 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 54.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.1908 -2.9692 7.5812 REMARK 3 T TENSOR REMARK 3 T11: 0.4038 T22: 0.4405 REMARK 3 T33: 0.4998 T12: -0.0281 REMARK 3 T13: 0.0057 T23: 0.0280 REMARK 3 L TENSOR REMARK 3 L11: 5.8165 L22: 1.5151 REMARK 3 L33: 4.2856 L12: 0.4683 REMARK 3 L13: 2.3169 L23: -0.4866 REMARK 3 S TENSOR REMARK 3 S11: -0.0997 S12: 0.0082 S13: -0.1844 REMARK 3 S21: -0.2020 S22: 0.5127 S23: -0.2702 REMARK 3 S31: -0.0111 S32: 0.3799 S33: -0.5447 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 19 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.5862 -2.0727 3.5306 REMARK 3 T TENSOR REMARK 3 T11: 0.4192 T22: 0.4225 REMARK 3 T33: 0.3968 T12: -0.0523 REMARK 3 T13: -0.0234 T23: 0.0174 REMARK 3 L TENSOR REMARK 3 L11: 4.2085 L22: 2.4402 REMARK 3 L33: 1.4946 L12: -0.7105 REMARK 3 L13: 0.2728 L23: 0.0340 REMARK 3 S TENSOR REMARK 3 S11: -0.0608 S12: 0.2896 S13: -0.0519 REMARK 3 S21: -0.2623 S22: -0.0090 S23: 0.1932 REMARK 3 S31: 0.0473 S32: 0.2192 S33: 0.0339 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.1103 -4.3813 17.6341 REMARK 3 T TENSOR REMARK 3 T11: 0.4053 T22: 0.7173 REMARK 3 T33: 0.4704 T12: 0.0129 REMARK 3 T13: -0.0139 T23: -0.0415 REMARK 3 L TENSOR REMARK 3 L11: 5.8771 L22: 3.0675 REMARK 3 L33: 3.9285 L12: 1.6588 REMARK 3 L13: 0.1336 L23: -0.2699 REMARK 3 S TENSOR REMARK 3 S11: 0.3567 S12: -0.6709 S13: -0.7250 REMARK 3 S21: 0.0721 S22: 0.0627 S23: -0.4864 REMARK 3 S31: 0.3080 S32: 0.9828 S33: -0.3311 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 247 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.1126 0.9939 22.0063 REMARK 3 T TENSOR REMARK 3 T11: 0.4102 T22: 0.5072 REMARK 3 T33: 0.4095 T12: -0.0743 REMARK 3 T13: 0.0124 T23: -0.0204 REMARK 3 L TENSOR REMARK 3 L11: 2.7083 L22: 2.5262 REMARK 3 L33: 2.2052 L12: 0.5353 REMARK 3 L13: 0.7938 L23: 0.0219 REMARK 3 S TENSOR REMARK 3 S11: 0.1669 S12: -0.6581 S13: -0.0097 REMARK 3 S21: 0.1594 S22: -0.0963 S23: 0.4049 REMARK 3 S31: -0.0833 S32: 0.0876 S33: -0.0451 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -4 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.5393 -19.8837 4.6704 REMARK 3 T TENSOR REMARK 3 T11: 0.4801 T22: 0.3596 REMARK 3 T33: 0.8543 T12: 0.0376 REMARK 3 T13: -0.1824 T23: -0.0355 REMARK 3 L TENSOR REMARK 3 L11: 3.7523 L22: 2.5129 REMARK 3 L33: 3.2792 L12: 0.2357 REMARK 3 L13: -0.0371 L23: -1.0678 REMARK 3 S TENSOR REMARK 3 S11: 0.1847 S12: 0.0562 S13: -0.2265 REMARK 3 S21: 0.0748 S22: -0.1670 S23: 0.3092 REMARK 3 S31: -0.0188 S32: 0.0492 S33: 0.0136 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 35 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.0712 -29.7579 6.6521 REMARK 3 T TENSOR REMARK 3 T11: 0.4236 T22: 0.3858 REMARK 3 T33: 0.8349 T12: -0.0090 REMARK 3 T13: -0.1729 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 1.5115 L22: 4.0792 REMARK 3 L33: 2.5158 L12: -1.6357 REMARK 3 L13: -0.5930 L23: -0.0485 REMARK 3 S TENSOR REMARK 3 S11: 0.1139 S12: -0.0494 S13: -0.3363 REMARK 3 S21: 0.1904 S22: -0.0382 S23: -0.3181 REMARK 3 S31: 0.1095 S32: 0.2291 S33: -0.0656 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 87 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.4775 -35.4824 -0.1079 REMARK 3 T TENSOR REMARK 3 T11: 0.4415 T22: 0.4009 REMARK 3 T33: 0.8652 T12: -0.0460 REMARK 3 T13: -0.1226 T23: -0.0378 REMARK 3 L TENSOR REMARK 3 L11: 3.8303 L22: 2.4938 REMARK 3 L33: 3.7546 L12: 0.0358 REMARK 3 L13: -1.0305 L23: -0.1773 REMARK 3 S TENSOR REMARK 3 S11: 0.0642 S12: -0.0757 S13: -0.5241 REMARK 3 S21: 0.0009 S22: -0.1397 S23: -0.4604 REMARK 3 S31: -0.3814 S32: 0.6091 S33: 0.0383 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 117 THROUGH 193 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.2720 -33.3760 -13.1154 REMARK 3 T TENSOR REMARK 3 T11: 0.5972 T22: 0.4496 REMARK 3 T33: 0.7757 T12: -0.0129 REMARK 3 T13: -0.1170 T23: -0.1141 REMARK 3 L TENSOR REMARK 3 L11: 1.5123 L22: 4.0135 REMARK 3 L33: 2.5473 L12: 0.1167 REMARK 3 L13: -0.2374 L23: -0.7490 REMARK 3 S TENSOR REMARK 3 S11: 0.0078 S12: 0.3966 S13: -0.6296 REMARK 3 S21: -0.6079 S22: 0.1315 S23: -0.4483 REMARK 3 S31: 0.0464 S32: 0.0091 S33: -0.1381 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 194 THROUGH 247 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.4381 -16.8065 -7.5131 REMARK 3 T TENSOR REMARK 3 T11: 0.5192 T22: 0.3809 REMARK 3 T33: 0.8437 T12: 0.0045 REMARK 3 T13: -0.2317 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 1.1307 L22: 2.8258 REMARK 3 L33: 1.5632 L12: 0.3821 REMARK 3 L13: 0.0571 L23: 1.1486 REMARK 3 S TENSOR REMARK 3 S11: -0.0226 S12: 0.0650 S13: 0.0400 REMARK 3 S21: -0.5048 S22: 0.0530 S23: 0.3489 REMARK 3 S31: -0.1934 S32: 0.0566 S33: -0.0082 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND ((RESID -1 THROUGH 1 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 2 THROUGH 56 OR RESID REMARK 3 58 THROUGH 80 OR RESID 82 THROUGH 104 OR REMARK 3 RESID 111 OR (RESID 112 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 113 THROUGH 115 OR (RESID 116 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 117 OR (RESID REMARK 3 118 THROUGH 119 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 120 THROUGH 147 OR (RESID 148 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 149 OR (RESID 150 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 151 THROUGH 174 OR (RESID 175 REMARK 3 THROUGH 178 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 179 THROUGH 180 OR (RESID 181 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 182 THROUGH 200 OR RESID 202 REMARK 3 THROUGH 247)) REMARK 3 SELECTION : (CHAIN B AND ((RESID -1 THROUGH 1 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 2 THROUGH 21 OR REMARK 3 (RESID 22 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 23 REMARK 3 THROUGH 56 OR RESID 58 THROUGH 80 OR REMARK 3 RESID 82 THROUGH 200 OR RESID 202 THROUGH REMARK 3 247)) REMARK 3 ATOM PAIRS NUMBER : 2116 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6W6A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1000247712. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27465 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 45.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.726 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.85 REMARK 200 R MERGE FOR SHELL (I) : 0.53500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.340 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5DLC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: STMAA.01536.A.B1.PW38756 AT 11.4 MG/ML REMARK 280 WITH 3 MM PLP AGAINST MORPHEUS SCREEN CONDITION E1: 10% PEG 20, REMARK 280 000, 20% PEG 550 MME, 0.1 M MES/IMIDAZOLE PH 6.5, 0.03 M EACH REMARK 280 GLYCOL (DIETHYLENEGLYCOL, TRIETHYLENEGLYCOL, TETRAETHYLENEGLYCOL, REMARK 280 PENTAETHYLENEGLYCOL), VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 93.39000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.73500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 93.39000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.73500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 MET B -7 REMARK 465 ALA B -6 REMARK 465 HIS B -5 REMARK 465 GLY B 105 REMARK 465 ASP B 106 REMARK 465 GLY B 107 REMARK 465 GLN B 108 REMARK 465 ILE B 109 REMARK 465 THR B 110 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A -1 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 22 CG CD OE1 OE2 REMARK 470 GLU A 82 CG CD OE1 OE2 REMARK 470 ILE A 109 CG1 CG2 CD1 REMARK 470 HIS B -4 CG ND1 CD2 CE1 NE2 REMARK 470 HIS B 0 CG ND1 CD2 CE1 NE2 REMARK 470 MET B 1 CG SD CE REMARK 470 GLU B 82 CG CD OE1 OE2 REMARK 470 ASP B 112 CG OD1 OD2 REMARK 470 ASP B 116 CG OD1 OD2 REMARK 470 GLU B 118 CG CD OE1 OE2 REMARK 470 ARG B 119 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 148 CG CD1 CD2 REMARK 470 GLU B 150 CG CD OE1 OE2 REMARK 470 ASP B 175 CG OD1 OD2 REMARK 470 GLU B 181 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR B 164 O GLY B 200 2.05 REMARK 500 O GLY A 20 O HOH A 401 2.13 REMARK 500 NH2 ARG B 64 O HOH B 301 2.15 REMARK 500 NH1 ARG A 209 O LEU A 246 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 50 -88.36 -127.04 REMARK 500 ASP A 104 119.38 -23.39 REMARK 500 HIS A 201 118.18 76.86 REMARK 500 HIS B -3 -171.42 -68.66 REMARK 500 HIS B 50 -89.05 -125.08 REMARK 500 HIS B 201 111.08 64.47 REMARK 500 HIS B 201 110.50 63.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-STMAA.01536.A RELATED DB: TARGETTRACK DBREF 6W6A A 1 247 UNP B2FT93 B2FT93_STRMK 1 247 DBREF 6W6A B 1 247 UNP B2FT93 B2FT93_STRMK 1 247 SEQADV 6W6A MET A -7 UNP B2FT93 INITIATING METHIONINE SEQADV 6W6A ALA A -6 UNP B2FT93 EXPRESSION TAG SEQADV 6W6A HIS A -5 UNP B2FT93 EXPRESSION TAG SEQADV 6W6A HIS A -4 UNP B2FT93 EXPRESSION TAG SEQADV 6W6A HIS A -3 UNP B2FT93 EXPRESSION TAG SEQADV 6W6A HIS A -2 UNP B2FT93 EXPRESSION TAG SEQADV 6W6A HIS A -1 UNP B2FT93 EXPRESSION TAG SEQADV 6W6A HIS A 0 UNP B2FT93 EXPRESSION TAG SEQADV 6W6A MET B -7 UNP B2FT93 INITIATING METHIONINE SEQADV 6W6A ALA B -6 UNP B2FT93 EXPRESSION TAG SEQADV 6W6A HIS B -5 UNP B2FT93 EXPRESSION TAG SEQADV 6W6A HIS B -4 UNP B2FT93 EXPRESSION TAG SEQADV 6W6A HIS B -3 UNP B2FT93 EXPRESSION TAG SEQADV 6W6A HIS B -2 UNP B2FT93 EXPRESSION TAG SEQADV 6W6A HIS B -1 UNP B2FT93 EXPRESSION TAG SEQADV 6W6A HIS B 0 UNP B2FT93 EXPRESSION TAG SEQRES 1 A 255 MET ALA HIS HIS HIS HIS HIS HIS MET THR GLN LEU SER SEQRES 2 A 255 VAL ASN VAL ASN LYS ILE ALA VAL LEU ARG ASN SER ARG SEQRES 3 A 255 GLY GLY ALA GLU PRO ASP VAL VAL ARG ALA ALA GLN ALA SEQRES 4 A 255 CYS LEU ASP ALA GLY ALA HIS GLY ILE THR VAL HIS PRO SEQRES 5 A 255 ARG PRO ASP ARG ARG HIS ILE THR ALA GLU ASP VAL LEU SEQRES 6 A 255 ALA LEU SER THR LEU THR ARG ALA ARG GLY VAL GLU PHE SEQRES 7 A 255 ASN ILE GLU GLY ASN PRO PHE ALA PRO PRO ARG GLU GLY SEQRES 8 A 255 TYR PRO GLY LEU LEU PRO LEU CYS ALA GLN THR ARG PRO SEQRES 9 A 255 ALA GLN ALA THR LEU VAL PRO ASP GLY ASP GLY GLN ILE SEQRES 10 A 255 THR SER ASP HIS GLY PHE ASP PHE GLU ARG ASP ALA GLU SEQRES 11 A 255 ARG LEU ARG PRO LEU VAL ALA GLU LEU LYS ALA MET GLY SEQRES 12 A 255 CYS ARG VAL SER LEU PHE VAL ASP ALA GLY ASN PRO LEU SEQRES 13 A 255 LEU GLU GLN ALA ALA GLU VAL GLY ALA ASP ARG VAL GLU SEQRES 14 A 255 LEU TYR THR GLY PRO TYR ALA GLU ALA HIS ALA ALA GLY SEQRES 15 A 255 ASP ALA ALA ALA MET LEU GLU LEU PHE ALA THR ALA ALA SEQRES 16 A 255 ARG ARG ALA GLN ALA MET GLY LEU GLY VAL ASN ALA GLY SEQRES 17 A 255 HIS ASP LEU SER GLN ASP ASN LEU ARG ASP PHE LEU ALA SEQRES 18 A 255 HIS VAL PRO ASP VAL LEU GLU VAL SER ILE GLY HIS ALA SEQRES 19 A 255 LEU ILE GLY GLU ALA LEU TYR ASP GLY LEU ASP ALA THR SEQRES 20 A 255 VAL ARG GLY TYR LEU ALA LEU LEU SEQRES 1 B 255 MET ALA HIS HIS HIS HIS HIS HIS MET THR GLN LEU SER SEQRES 2 B 255 VAL ASN VAL ASN LYS ILE ALA VAL LEU ARG ASN SER ARG SEQRES 3 B 255 GLY GLY ALA GLU PRO ASP VAL VAL ARG ALA ALA GLN ALA SEQRES 4 B 255 CYS LEU ASP ALA GLY ALA HIS GLY ILE THR VAL HIS PRO SEQRES 5 B 255 ARG PRO ASP ARG ARG HIS ILE THR ALA GLU ASP VAL LEU SEQRES 6 B 255 ALA LEU SER THR LEU THR ARG ALA ARG GLY VAL GLU PHE SEQRES 7 B 255 ASN ILE GLU GLY ASN PRO PHE ALA PRO PRO ARG GLU GLY SEQRES 8 B 255 TYR PRO GLY LEU LEU PRO LEU CYS ALA GLN THR ARG PRO SEQRES 9 B 255 ALA GLN ALA THR LEU VAL PRO ASP GLY ASP GLY GLN ILE SEQRES 10 B 255 THR SER ASP HIS GLY PHE ASP PHE GLU ARG ASP ALA GLU SEQRES 11 B 255 ARG LEU ARG PRO LEU VAL ALA GLU LEU LYS ALA MET GLY SEQRES 12 B 255 CYS ARG VAL SER LEU PHE VAL ASP ALA GLY ASN PRO LEU SEQRES 13 B 255 LEU GLU GLN ALA ALA GLU VAL GLY ALA ASP ARG VAL GLU SEQRES 14 B 255 LEU TYR THR GLY PRO TYR ALA GLU ALA HIS ALA ALA GLY SEQRES 15 B 255 ASP ALA ALA ALA MET LEU GLU LEU PHE ALA THR ALA ALA SEQRES 16 B 255 ARG ARG ALA GLN ALA MET GLY LEU GLY VAL ASN ALA GLY SEQRES 17 B 255 HIS ASP LEU SER GLN ASP ASN LEU ARG ASP PHE LEU ALA SEQRES 18 B 255 HIS VAL PRO ASP VAL LEU GLU VAL SER ILE GLY HIS ALA SEQRES 19 B 255 LEU ILE GLY GLU ALA LEU TYR ASP GLY LEU ASP ALA THR SEQRES 20 B 255 VAL ARG GLY TYR LEU ALA LEU LEU HET PO4 A 301 5 HET PO4 A 302 5 HETNAM PO4 PHOSPHATE ION FORMUL 3 PO4 2(O4 P 3-) FORMUL 5 HOH *68(H2 O) HELIX 1 AA1 VAL A 8 GLY A 19 1 12 HELIX 2 AA2 ASP A 24 ALA A 35 1 12 HELIX 3 AA3 THR A 52 ARG A 66 1 15 HELIX 4 AA4 GLY A 86 ARG A 95 1 10 HELIX 5 AA5 ASP A 116 ALA A 133 1 18 HELIX 6 AA6 GLU A 150 GLY A 156 1 7 HELIX 7 AA7 THR A 164 ALA A 173 1 10 HELIX 8 AA8 ALA A 176 ALA A 192 1 17 HELIX 9 AA9 ASN A 207 VAL A 215 1 9 HELIX 10 AB1 GLY A 224 GLY A 235 1 12 HELIX 11 AB2 GLY A 235 LEU A 247 1 13 HELIX 12 AB3 VAL B 8 GLY B 19 1 12 HELIX 13 AB4 ASP B 24 ALA B 35 1 12 HELIX 14 AB5 THR B 52 ARG B 66 1 15 HELIX 15 AB6 GLY B 86 ARG B 95 1 10 HELIX 16 AB7 ASP B 116 MET B 134 1 19 HELIX 17 AB8 GLU B 150 GLY B 156 1 7 HELIX 18 AB9 THR B 164 ALA B 173 1 10 HELIX 19 AC1 ALA B 176 ALA B 192 1 17 HELIX 20 AC2 ASN B 207 VAL B 215 1 9 HELIX 21 AC3 GLY B 224 GLY B 235 1 12 HELIX 22 AC4 GLY B 235 ALA B 245 1 11 SHEET 1 AA1 9 GLN A 3 ASN A 7 0 SHEET 2 AA1 9 GLY A 39 VAL A 42 1 O THR A 41 N VAL A 6 SHEET 3 AA1 9 GLU A 69 GLY A 74 1 O GLU A 73 N VAL A 42 SHEET 4 AA1 9 GLN A 98 LEU A 101 1 O THR A 100 N ILE A 72 SHEET 5 AA1 9 ARG A 137 VAL A 142 1 O SER A 139 N LEU A 101 SHEET 6 AA1 9 ARG A 159 TYR A 163 1 O GLU A 161 N LEU A 140 SHEET 7 AA1 9 GLY A 196 GLY A 200 1 O ASN A 198 N VAL A 160 SHEET 8 AA1 9 VAL A 218 ILE A 223 1 O LEU A 219 N VAL A 197 SHEET 9 AA1 9 GLN A 3 ASN A 7 1 N SER A 5 O VAL A 221 SHEET 1 AA2 9 GLN B 3 ASN B 7 0 SHEET 2 AA2 9 GLY B 39 VAL B 42 1 O THR B 41 N VAL B 6 SHEET 3 AA2 9 GLU B 69 GLY B 74 1 O GLU B 73 N VAL B 42 SHEET 4 AA2 9 GLN B 98 LEU B 101 1 O THR B 100 N ILE B 72 SHEET 5 AA2 9 ARG B 137 VAL B 142 1 O SER B 139 N LEU B 101 SHEET 6 AA2 9 ARG B 159 TYR B 163 1 O GLU B 161 N LEU B 140 SHEET 7 AA2 9 GLY B 196 GLY B 200 1 O ASN B 198 N VAL B 160 SHEET 8 AA2 9 VAL B 218 ILE B 223 1 O LEU B 219 N VAL B 197 SHEET 9 AA2 9 GLN B 3 ASN B 7 1 N SER B 5 O VAL B 221 CISPEP 1 GLU A 22 PRO A 23 0 -3.77 CISPEP 2 GLU B 22 PRO B 23 0 -5.08 SITE 1 AC1 8 ASN A 9 LYS A 10 ARG A 45 HIS A 50 SITE 2 AC1 8 ILE A 109 THR A 110 HOH A 407 ARG B 18 SITE 1 AC2 7 HIS A 201 ASP A 202 ILE A 223 GLY A 224 SITE 2 AC2 7 HIS A 225 HOH A 405 ARG B 18 CRYST1 186.780 57.470 71.770 90.00 102.40 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005354 0.000000 0.001177 0.00000 SCALE2 0.000000 0.017400 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014266 0.00000