HEADER SIGNALING PROTEIN 26-MAR-20 6WAX TITLE C-TERMINAL SH2 DOMAIN OF P120RASGAP COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS GTPASE-ACTIVATING PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RASGAP,RAS P21 PROTEIN ACTIVATOR,P120GAP; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RASA1, GAP, RASA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET KEYWDS SH2 DOMAIN, RASGAP, PHOSPHOPEPTIDE, PHOSPHOTYROSINE, SIGNALING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.JABER CHEHAYEB,J.WANG,A.L.STIEGLER,T.J.BOGGON REVDAT 4 18-OCT-23 6WAX 1 REMARK REVDAT 3 12-AUG-20 6WAX 1 JRNL REVDAT 2 01-JUL-20 6WAX 1 JRNL REVDAT 1 17-JUN-20 6WAX 0 JRNL AUTH R.JABER CHEHAYEB,J.WANG,A.L.STIEGLER,T.J.BOGGON JRNL TITL THE GTPASE-ACTIVATING PROTEIN P120RASGAP HAS AN JRNL TITL 2 EVOLUTIONARILY CONSERVED "FLVR-UNIQUE" SH2 DOMAIN. JRNL REF J.BIOL.CHEM. V. 295 10511 2020 JRNL REFN ESSN 1083-351X JRNL PMID 32540970 JRNL DOI 10.1074/JBC.RA120.013976 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.37 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 40121 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 1943 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.3680 - 3.6157 1.00 2940 140 0.1620 0.1527 REMARK 3 2 3.6157 - 2.8700 1.00 2822 112 0.1706 0.1832 REMARK 3 3 2.8700 - 2.5072 1.00 2763 132 0.1838 0.2077 REMARK 3 4 2.5072 - 2.2780 1.00 2743 124 0.1736 0.2008 REMARK 3 5 2.2780 - 2.1147 1.00 2732 142 0.1754 0.2264 REMARK 3 6 2.1147 - 1.9900 1.00 2718 145 0.1859 0.2263 REMARK 3 7 1.9900 - 1.8904 1.00 2715 151 0.1882 0.2267 REMARK 3 8 1.8904 - 1.8081 1.00 2707 143 0.2008 0.2348 REMARK 3 9 1.8081 - 1.7385 1.00 2682 165 0.2031 0.2289 REMARK 3 10 1.7385 - 1.6785 1.00 2689 146 0.2173 0.2696 REMARK 3 11 1.6785 - 1.6260 1.00 2704 127 0.2222 0.2568 REMARK 3 12 1.6260 - 1.5795 1.00 2711 146 0.2359 0.2715 REMARK 3 13 1.5795 - 1.5379 1.00 2662 144 0.2530 0.2809 REMARK 3 14 1.5379 - 1.5004 0.95 2590 126 0.2847 0.2969 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.800 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1882 REMARK 3 ANGLE : 0.872 2544 REMARK 3 CHIRALITY : 0.060 248 REMARK 3 PLANARITY : 0.007 340 REMARK 3 DIHEDRAL : 12.297 1126 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 340 THROUGH 349 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.4318 55.3673 59.5254 REMARK 3 T TENSOR REMARK 3 T11: 0.2728 T22: 0.2874 REMARK 3 T33: 0.3033 T12: 0.0219 REMARK 3 T13: 0.0177 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 4.8606 L22: 3.3761 REMARK 3 L33: 7.1828 L12: -3.3460 REMARK 3 L13: -4.9838 L23: 1.9444 REMARK 3 S TENSOR REMARK 3 S11: -0.4963 S12: -0.6289 S13: -0.0442 REMARK 3 S21: 0.6560 S22: 0.4042 S23: 0.2284 REMARK 3 S31: 0.1804 S32: 0.0813 S33: 0.0618 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 350 THROUGH 357 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.4940 53.9640 58.6446 REMARK 3 T TENSOR REMARK 3 T11: 0.1603 T22: 0.2562 REMARK 3 T33: 0.1645 T12: 0.0116 REMARK 3 T13: 0.0185 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 6.3305 L22: 7.9741 REMARK 3 L33: 5.0921 L12: 2.6759 REMARK 3 L13: 1.3465 L23: -1.1967 REMARK 3 S TENSOR REMARK 3 S11: 0.1051 S12: -0.8328 S13: -0.1366 REMARK 3 S21: 0.2654 S22: -0.1430 S23: 0.0232 REMARK 3 S31: 0.2406 S32: -0.1883 S33: -0.0060 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 358 THROUGH 373 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.9461 53.1097 57.6397 REMARK 3 T TENSOR REMARK 3 T11: 0.2138 T22: 0.2801 REMARK 3 T33: 0.2522 T12: 0.0193 REMARK 3 T13: -0.0224 T23: 0.0125 REMARK 3 L TENSOR REMARK 3 L11: 4.6479 L22: 3.4012 REMARK 3 L33: 5.3334 L12: 0.7588 REMARK 3 L13: -0.6540 L23: 2.0305 REMARK 3 S TENSOR REMARK 3 S11: 0.0018 S12: -0.1769 S13: 0.1525 REMARK 3 S21: -0.0155 S22: 0.0175 S23: -0.3130 REMARK 3 S31: 0.1251 S32: 0.3712 S33: 0.0227 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 374 THROUGH 391 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.2953 60.8618 54.3683 REMARK 3 T TENSOR REMARK 3 T11: 0.1461 T22: 0.1777 REMARK 3 T33: 0.2020 T12: -0.0200 REMARK 3 T13: -0.0236 T23: -0.0352 REMARK 3 L TENSOR REMARK 3 L11: 6.5553 L22: 6.2655 REMARK 3 L33: 4.7436 L12: -4.5241 REMARK 3 L13: -1.8904 L23: 1.4029 REMARK 3 S TENSOR REMARK 3 S11: -0.1259 S12: -0.2942 S13: 0.6383 REMARK 3 S21: 0.2463 S22: 0.1887 S23: -0.3140 REMARK 3 S31: -0.2001 S32: 0.2052 S33: -0.1305 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 392 THROUGH 402 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9781 61.0383 49.5511 REMARK 3 T TENSOR REMARK 3 T11: 0.2167 T22: 0.2517 REMARK 3 T33: 0.2732 T12: -0.0582 REMARK 3 T13: -0.0094 T23: -0.0181 REMARK 3 L TENSOR REMARK 3 L11: 4.2804 L22: 9.0260 REMARK 3 L33: 5.5375 L12: -5.7783 REMARK 3 L13: 4.0974 L23: -4.1747 REMARK 3 S TENSOR REMARK 3 S11: -0.2096 S12: -0.0481 S13: 1.0053 REMARK 3 S21: 0.1612 S22: -0.1408 S23: -0.8516 REMARK 3 S31: -0.2512 S32: 0.6579 S33: 0.1878 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 403 THROUGH 411 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6059 64.3385 45.2175 REMARK 3 T TENSOR REMARK 3 T11: 0.2598 T22: 0.2057 REMARK 3 T33: 0.2607 T12: 0.0198 REMARK 3 T13: 0.0026 T23: 0.0238 REMARK 3 L TENSOR REMARK 3 L11: 3.8822 L22: 4.2592 REMARK 3 L33: 8.4924 L12: -3.9939 REMARK 3 L13: -2.7391 L23: 3.8678 REMARK 3 S TENSOR REMARK 3 S11: -0.1270 S12: -0.5288 S13: -0.0876 REMARK 3 S21: 0.0647 S22: -0.0426 S23: 0.2705 REMARK 3 S31: -0.2720 S32: 0.0022 S33: 0.1925 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 412 THROUGH 418 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0315 61.9182 40.3535 REMARK 3 T TENSOR REMARK 3 T11: 0.2553 T22: 0.2221 REMARK 3 T33: 0.2547 T12: 0.0093 REMARK 3 T13: -0.0059 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 8.1320 L22: 8.8603 REMARK 3 L33: 7.9980 L12: 5.8712 REMARK 3 L13: 0.4889 L23: -2.0515 REMARK 3 S TENSOR REMARK 3 S11: -0.0915 S12: 0.2946 S13: 0.1087 REMARK 3 S21: -0.6223 S22: 0.1500 S23: 0.1407 REMARK 3 S31: 0.0088 S32: 0.2000 S33: -0.1087 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 419 THROUGH 428 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.7462 53.2648 41.9622 REMARK 3 T TENSOR REMARK 3 T11: 0.2177 T22: 0.1899 REMARK 3 T33: 0.2044 T12: -0.0297 REMARK 3 T13: -0.0358 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 8.5255 L22: 7.9125 REMARK 3 L33: 8.6367 L12: -5.6102 REMARK 3 L13: -5.0269 L23: -0.5742 REMARK 3 S TENSOR REMARK 3 S11: -0.1952 S12: 0.3531 S13: -0.0711 REMARK 3 S21: -0.2620 S22: 0.0570 S23: -0.0236 REMARK 3 S31: 0.1992 S32: -0.0925 S33: 0.1118 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 429 THROUGH 433 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4129 56.9054 38.9193 REMARK 3 T TENSOR REMARK 3 T11: 0.3670 T22: 0.4556 REMARK 3 T33: 0.3685 T12: -0.0580 REMARK 3 T13: 0.0471 T23: 0.1251 REMARK 3 L TENSOR REMARK 3 L11: 5.7503 L22: 3.9091 REMARK 3 L33: 2.2203 L12: 4.1849 REMARK 3 L13: -0.4379 L23: -0.6986 REMARK 3 S TENSOR REMARK 3 S11: -0.4216 S12: 1.4304 S13: 0.5605 REMARK 3 S21: -0.9630 S22: 0.0708 S23: -0.3876 REMARK 3 S31: -0.5052 S32: 1.5115 S33: 0.2321 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 434 THROUGH 444 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7374 49.3168 49.7797 REMARK 3 T TENSOR REMARK 3 T11: 0.2213 T22: 0.2771 REMARK 3 T33: 0.2796 T12: 0.0086 REMARK 3 T13: 0.0216 T23: 0.0257 REMARK 3 L TENSOR REMARK 3 L11: 2.4899 L22: 8.8528 REMARK 3 L33: 6.9444 L12: 2.2799 REMARK 3 L13: -0.6375 L23: -3.4122 REMARK 3 S TENSOR REMARK 3 S11: 0.1083 S12: -0.1479 S13: -0.1906 REMARK 3 S21: 0.4561 S22: -0.0468 S23: 0.0403 REMARK 3 S31: 0.2170 S32: -0.2931 S33: -0.2398 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 343 THROUGH 348 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6615 35.4619 52.0560 REMARK 3 T TENSOR REMARK 3 T11: 0.5494 T22: 0.6891 REMARK 3 T33: 1.1754 T12: 0.0442 REMARK 3 T13: -0.1877 T23: -0.2004 REMARK 3 L TENSOR REMARK 3 L11: 2.7831 L22: 3.9884 REMARK 3 L33: 6.0883 L12: -2.7753 REMARK 3 L13: 0.0223 L23: 2.4586 REMARK 3 S TENSOR REMARK 3 S11: -0.0040 S12: -1.1315 S13: -1.4428 REMARK 3 S21: 1.2333 S22: 1.1343 S23: -3.4184 REMARK 3 S31: 1.1982 S32: 1.4784 S33: -1.0952 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 349 THROUGH 378 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.3279 33.4038 51.4244 REMARK 3 T TENSOR REMARK 3 T11: 0.2521 T22: 0.1758 REMARK 3 T33: 0.1646 T12: -0.0163 REMARK 3 T13: 0.0151 T23: 0.0114 REMARK 3 L TENSOR REMARK 3 L11: 7.0505 L22: 6.0130 REMARK 3 L33: 3.9276 L12: 2.2559 REMARK 3 L13: -1.0806 L23: -0.8374 REMARK 3 S TENSOR REMARK 3 S11: 0.3140 S12: -0.2480 S13: -0.1292 REMARK 3 S21: 0.4797 S22: -0.2250 S23: 0.1291 REMARK 3 S31: -0.0593 S32: 0.0250 S33: -0.0911 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 379 THROUGH 401 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2667 28.8496 43.6711 REMARK 3 T TENSOR REMARK 3 T11: 0.2215 T22: 0.1997 REMARK 3 T33: 0.2658 T12: -0.0639 REMARK 3 T13: -0.0299 T23: 0.0310 REMARK 3 L TENSOR REMARK 3 L11: 8.8109 L22: 9.6737 REMARK 3 L33: 3.7986 L12: -6.8736 REMARK 3 L13: -2.3840 L23: 0.5013 REMARK 3 S TENSOR REMARK 3 S11: 0.2541 S12: 0.3460 S13: -0.8329 REMARK 3 S21: -0.2549 S22: -0.0506 S23: 0.5579 REMARK 3 S31: 0.1394 S32: -0.3000 S33: -0.2246 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 402 THROUGH 444 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.1784 36.4272 39.4284 REMARK 3 T TENSOR REMARK 3 T11: 0.2231 T22: 0.1882 REMARK 3 T33: 0.1725 T12: -0.0178 REMARK 3 T13: -0.0040 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 5.9045 L22: 2.9015 REMARK 3 L33: 2.3234 L12: -1.1824 REMARK 3 L13: -2.7039 L23: 0.5389 REMARK 3 S TENSOR REMARK 3 S11: 0.1666 S12: 0.2150 S13: 0.0916 REMARK 3 S21: -0.1233 S22: -0.0157 S23: -0.0226 REMARK 3 S31: -0.1369 S32: -0.0343 S33: -0.1363 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 343 THROUGH 395 OR REMARK 3 RESID 397 THROUGH 401 OR RESID 403 REMARK 3 THROUGH 409 OR RESID 412 THROUGH 413 OR REMARK 3 RESID 415 THROUGH 422 OR RESID 425 REMARK 3 THROUGH 431 OR RESID 433 THROUGH 444)) REMARK 3 SELECTION : (CHAIN B AND (RESID 343 THROUGH 395 OR REMARK 3 RESID 397 THROUGH 401 OR RESID 403 REMARK 3 THROUGH 409 OR RESID 412 THROUGH 413 OR REMARK 3 RESID 415 THROUGH 422 OR RESID 425 REMARK 3 THROUGH 431 OR RESID 433 THROUGH 444)) REMARK 3 ATOM PAIRS NUMBER : 874 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WAX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000246849. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97920 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40194 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.70 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 1.02600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1D4T REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.3 M AMMONIUM SULFATE, 0.1 M BIS TRIS REMARK 280 PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.24950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.80700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.79400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 35.80700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.24950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.79400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 338 REMARK 465 SER A 339 REMARK 465 GLY B 338 REMARK 465 SER B 339 REMARK 465 GLY B 340 REMARK 465 ARG B 341 REMARK 465 GLU B 342 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 424 O HOH A 601 2.08 REMARK 500 O4 SO4 B 501 O HOH B 601 2.08 REMARK 500 OD1 ASP A 424 O HOH A 602 2.10 REMARK 500 O3 SO4 A 501 O HOH A 603 2.17 REMARK 500 O HOH B 619 O HOH B 643 2.18 REMARK 500 O HOH B 684 O HOH B 708 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 355 31.24 -140.20 REMARK 500 LYS A 438 -79.38 -116.72 REMARK 500 THR B 367 -60.38 -108.96 REMARK 500 ASN B 406 30.64 -96.67 REMARK 500 LYS B 438 -80.47 -113.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 504 DBREF 6WAX A 340 444 UNP P20936 RASA1_HUMAN 340 444 DBREF 6WAX B 340 444 UNP P20936 RASA1_HUMAN 340 444 SEQADV 6WAX GLY A 338 UNP P20936 EXPRESSION TAG SEQADV 6WAX SER A 339 UNP P20936 EXPRESSION TAG SEQADV 6WAX SER A 372 UNP P20936 CYS 372 ENGINEERED MUTATION SEQADV 6WAX SER A 402 UNP P20936 CYS 402 ENGINEERED MUTATION SEQADV 6WAX GLY B 338 UNP P20936 EXPRESSION TAG SEQADV 6WAX SER B 339 UNP P20936 EXPRESSION TAG SEQADV 6WAX SER B 372 UNP P20936 CYS 372 ENGINEERED MUTATION SEQADV 6WAX SER B 402 UNP P20936 CYS 402 ENGINEERED MUTATION SEQRES 1 A 107 GLY SER GLY ARG GLU GLU ASP PRO HIS GLU GLY LYS ILE SEQRES 2 A 107 TRP PHE HIS GLY LYS ILE SER LYS GLN GLU ALA TYR ASN SEQRES 3 A 107 LEU LEU MET THR VAL GLY GLN VAL SER SER PHE LEU VAL SEQRES 4 A 107 ARG PRO SER ASP ASN THR PRO GLY ASP TYR SER LEU TYR SEQRES 5 A 107 PHE ARG THR ASN GLU ASN ILE GLN ARG PHE LYS ILE SER SEQRES 6 A 107 PRO THR PRO ASN ASN GLN PHE MET MET GLY GLY ARG TYR SEQRES 7 A 107 TYR ASN SER ILE GLY ASP ILE ILE ASP HIS TYR ARG LYS SEQRES 8 A 107 GLU GLN ILE VAL GLU GLY TYR TYR LEU LYS GLU PRO VAL SEQRES 9 A 107 PRO MET GLN SEQRES 1 B 107 GLY SER GLY ARG GLU GLU ASP PRO HIS GLU GLY LYS ILE SEQRES 2 B 107 TRP PHE HIS GLY LYS ILE SER LYS GLN GLU ALA TYR ASN SEQRES 3 B 107 LEU LEU MET THR VAL GLY GLN VAL SER SER PHE LEU VAL SEQRES 4 B 107 ARG PRO SER ASP ASN THR PRO GLY ASP TYR SER LEU TYR SEQRES 5 B 107 PHE ARG THR ASN GLU ASN ILE GLN ARG PHE LYS ILE SER SEQRES 6 B 107 PRO THR PRO ASN ASN GLN PHE MET MET GLY GLY ARG TYR SEQRES 7 B 107 TYR ASN SER ILE GLY ASP ILE ILE ASP HIS TYR ARG LYS SEQRES 8 B 107 GLU GLN ILE VAL GLU GLY TYR TYR LEU LYS GLU PRO VAL SEQRES 9 B 107 PRO MET GLN HET SO4 A 501 5 HET EDO A 502 4 HET EDO A 503 4 HET EDO A 504 4 HET SO4 B 501 5 HET EDO B 502 4 HET EDO B 503 4 HET EDO B 504 4 HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 EDO 6(C2 H6 O2) FORMUL 11 HOH *243(H2 O) HELIX 1 AA1 SER A 357 VAL A 368 1 12 HELIX 2 AA2 SER A 418 GLU A 429 1 12 HELIX 3 AA3 SER B 357 VAL B 368 1 12 HELIX 4 AA4 SER B 418 GLU B 429 1 12 SHEET 1 AA1 5 PHE A 374 PRO A 378 0 SHEET 2 AA1 5 TYR A 386 ARG A 391 -1 O TYR A 389 N LEU A 375 SHEET 3 AA1 5 ILE A 396 PRO A 403 -1 O ILE A 401 N TYR A 386 SHEET 4 AA1 5 PHE A 409 MET A 411 -1 O MET A 410 N SER A 402 SHEET 5 AA1 5 ARG A 414 TYR A 416 -1 O TYR A 416 N PHE A 409 SHEET 1 AA2 5 PHE B 374 PRO B 378 0 SHEET 2 AA2 5 TYR B 386 ARG B 391 -1 O TYR B 389 N LEU B 375 SHEET 3 AA2 5 ILE B 396 PRO B 403 -1 O GLN B 397 N PHE B 390 SHEET 4 AA2 5 PHE B 409 MET B 411 -1 O MET B 410 N SER B 402 SHEET 5 AA2 5 ARG B 414 TYR B 416 -1 O ARG B 414 N MET B 411 SITE 1 AC1 7 LYS A 358 SER A 379 ASP A 380 ASN A 381 SITE 2 AC1 7 SER A 387 ARG A 398 HOH A 603 SITE 1 AC2 4 LYS A 349 SER A 418 HOH A 635 HOH A 662 SITE 1 AC3 3 GLY A 412 TYR A 426 ILE A 431 SITE 1 AC4 7 HIS A 353 GLY A 354 LYS A 355 ILE A 356 SITE 2 AC4 7 MET A 443 HOH A 654 HOH A 689 SITE 1 AC5 8 LYS B 358 SER B 379 ASP B 380 ASN B 381 SITE 2 AC5 8 SER B 387 ARG B 398 HOH B 601 HOH B 611 SITE 1 AC6 3 GLN B 370 ARG B 391 HOH B 618 SITE 1 AC7 8 PRO B 345 HIS B 346 PHE B 409 ASN B 417 SITE 2 AC7 8 SER B 418 ILE B 419 HOH B 645 HOH B 682 SITE 1 AC8 2 HIS B 425 LYS B 428 CRYST1 52.499 65.588 71.614 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019048 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015247 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013964 0.00000