HEADER TRANSFERASE 26-MAR-20 6WB5 TITLE MICROBIOME-DERIVED ACARBOSE KINASE MAK1 AS A COMPLEX WITH ACARBOSE AND TITLE 2 AMP-PNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACARBOSE KINASE MAK1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED BACTERIUM; SOURCE 3 ORGANISM_TAXID: 77133; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS CARBOHYDRATE KINASE, ACARBOSE, TRANSFERASE, NUCLEOTIDE BINDING, ATP KEYWDS 2 BINDING, METAL ION BINDING, RIBOKINASE ACTIVITY, COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR P.D.JEFFREY,J.N.BALAICH,M.A.ESTRELLA,M.S.DONIA REVDAT 4 18-OCT-23 6WB5 1 REMARK REVDAT 3 15-DEC-21 6WB5 1 JRNL REVDAT 2 08-DEC-21 6WB5 1 JRNL REVDAT 1 21-APR-21 6WB5 0 JRNL AUTH J.BALAICH,M.ESTRELLA,G.WU,P.D.JEFFREY,A.BISWAS,L.ZHAO, JRNL AUTH 2 A.KORENNYKH,M.S.DONIA JRNL TITL THE HUMAN MICROBIOME ENCODES RESISTANCE TO THE ANTIDIABETIC JRNL TITL 2 DRUG ACARBOSE. JRNL REF NATURE V. 600 110 2021 JRNL REFN ESSN 1476-4687 JRNL PMID 34819672 JRNL DOI 10.1038/S41586-021-04091-0 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 12583 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.470 REMARK 3 FREE R VALUE TEST SET COUNT : 688 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.3300 - 5.2956 1.00 2408 138 0.1556 0.2251 REMARK 3 2 5.2956 - 4.2077 1.00 2381 143 0.1394 0.2159 REMARK 3 3 4.2077 - 3.6771 1.00 2382 136 0.1569 0.2513 REMARK 3 4 3.6771 - 3.3415 1.00 2375 139 0.1855 0.2963 REMARK 3 5 3.3415 - 3.1023 0.99 2349 132 0.2278 0.3354 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 66.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4830 REMARK 3 ANGLE : 1.006 6593 REMARK 3 CHIRALITY : 0.038 764 REMARK 3 PLANARITY : 0.005 839 REMARK 3 DIHEDRAL : 15.379 1717 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6125 37.1724 16.9378 REMARK 3 T TENSOR REMARK 3 T11: 0.3591 T22: 0.3718 REMARK 3 T33: 0.3026 T12: -0.0786 REMARK 3 T13: 0.0182 T23: -0.0681 REMARK 3 L TENSOR REMARK 3 L11: 0.0213 L22: 0.0165 REMARK 3 L33: 0.0068 L12: -0.0447 REMARK 3 L13: -0.0090 L23: 0.0204 REMARK 3 S TENSOR REMARK 3 S11: 0.1287 S12: -0.0649 S13: -0.0463 REMARK 3 S21: 0.0896 S22: 0.0221 S23: -0.0155 REMARK 3 S31: -0.0011 S32: 0.1354 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.5614 29.3867 14.9304 REMARK 3 T TENSOR REMARK 3 T11: 0.1460 T22: 0.2483 REMARK 3 T33: 0.1469 T12: 0.0738 REMARK 3 T13: -0.1130 T23: 0.1593 REMARK 3 L TENSOR REMARK 3 L11: -0.0042 L22: 0.2045 REMARK 3 L33: 0.1497 L12: -0.0150 REMARK 3 L13: 0.0149 L23: -0.0560 REMARK 3 S TENSOR REMARK 3 S11: 0.1106 S12: -0.1320 S13: 0.0560 REMARK 3 S21: 0.2564 S22: -0.1306 S23: 0.3121 REMARK 3 S31: 0.0809 S32: -0.2229 S33: -0.0279 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 190 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.9331 31.0797 2.5118 REMARK 3 T TENSOR REMARK 3 T11: 0.0696 T22: 0.1328 REMARK 3 T33: 0.3051 T12: 0.1721 REMARK 3 T13: -0.2228 T23: 0.0308 REMARK 3 L TENSOR REMARK 3 L11: 0.1468 L22: 0.1076 REMARK 3 L33: 0.1270 L12: 0.0192 REMARK 3 L13: 0.1138 L23: -0.0658 REMARK 3 S TENSOR REMARK 3 S11: -0.0294 S12: 0.1785 S13: -0.2769 REMARK 3 S21: -0.1271 S22: 0.1651 S23: -0.3762 REMARK 3 S31: -0.1887 S32: 0.0732 S33: 0.0802 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 191 THROUGH 299 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.1057 45.4815 -0.4838 REMARK 3 T TENSOR REMARK 3 T11: 0.2816 T22: 0.3467 REMARK 3 T33: 0.2670 T12: 0.0651 REMARK 3 T13: 0.0011 T23: -0.0152 REMARK 3 L TENSOR REMARK 3 L11: 0.0444 L22: 0.1566 REMARK 3 L33: 0.1138 L12: 0.0809 REMARK 3 L13: 0.0090 L23: -0.0273 REMARK 3 S TENSOR REMARK 3 S11: 0.1634 S12: 0.0773 S13: -0.0056 REMARK 3 S21: -0.0126 S22: -0.0728 S23: -0.0162 REMARK 3 S31: -0.2830 S32: -0.1755 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -6 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.5263 31.8216 34.8851 REMARK 3 T TENSOR REMARK 3 T11: 0.4336 T22: 0.5480 REMARK 3 T33: 0.3702 T12: -0.0627 REMARK 3 T13: -0.0258 T23: 0.0756 REMARK 3 L TENSOR REMARK 3 L11: 0.0020 L22: 0.0385 REMARK 3 L33: 0.0020 L12: -0.0391 REMARK 3 L13: -0.0160 L23: -0.0467 REMARK 3 S TENSOR REMARK 3 S11: -0.0333 S12: 0.0445 S13: -0.0599 REMARK 3 S21: -0.1142 S22: 0.0582 S23: 0.0767 REMARK 3 S31: 0.0096 S32: 0.0799 S33: -0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 43 THROUGH 190 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0985 35.4038 46.8988 REMARK 3 T TENSOR REMARK 3 T11: 0.2322 T22: 0.3612 REMARK 3 T33: 0.2913 T12: -0.0081 REMARK 3 T13: -0.0581 T23: 0.1346 REMARK 3 L TENSOR REMARK 3 L11: 0.1534 L22: 0.2212 REMARK 3 L33: 0.3119 L12: -0.1240 REMARK 3 L13: -0.1323 L23: -0.0607 REMARK 3 S TENSOR REMARK 3 S11: -0.0552 S12: 0.0208 S13: 0.1119 REMARK 3 S21: -0.1600 S22: 0.2627 S23: 0.3649 REMARK 3 S31: 0.0713 S32: -0.1966 S33: 0.2328 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 191 THROUGH 244 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.7244 41.0253 56.3256 REMARK 3 T TENSOR REMARK 3 T11: 0.3257 T22: 0.3086 REMARK 3 T33: 0.3261 T12: -0.0219 REMARK 3 T13: 0.0991 T23: 0.0306 REMARK 3 L TENSOR REMARK 3 L11: 0.0033 L22: 0.0900 REMARK 3 L33: 0.0671 L12: 0.0116 REMARK 3 L13: 0.0432 L23: -0.0529 REMARK 3 S TENSOR REMARK 3 S11: 0.1426 S12: -0.0604 S13: -0.0616 REMARK 3 S21: -0.1692 S22: -0.0882 S23: -0.0731 REMARK 3 S31: -0.2205 S32: 0.1583 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 245 THROUGH 299 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.8366 26.9988 52.6246 REMARK 3 T TENSOR REMARK 3 T11: 0.4187 T22: 0.3409 REMARK 3 T33: 0.2882 T12: 0.1048 REMARK 3 T13: -0.0099 T23: 0.0325 REMARK 3 L TENSOR REMARK 3 L11: 0.0240 L22: 0.0207 REMARK 3 L33: 0.0177 L12: 0.0216 REMARK 3 L13: -0.0113 L23: 0.0164 REMARK 3 S TENSOR REMARK 3 S11: 0.2354 S12: -0.1104 S13: -0.1275 REMARK 3 S21: -0.1940 S22: -0.0215 S23: -0.1436 REMARK 3 S31: 0.2853 S32: 0.2307 S33: 0.0002 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 2564 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WB5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1000247951. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-AUG-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9201 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12632 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 28.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 14.40 REMARK 200 R MERGE (I) : 0.17100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 14.10 REMARK 200 R MERGE FOR SHELL (I) : 1.08500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6WB4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.25 M AMMONIUM DIHYDROGEN PHOSPHATE, REMARK 280 0.1M TRIS-HCL PH 8.3, 10 MM MNCL2, 6 MM AMP-PNP, 50 MM ACARBOSE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 109.55600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 54.77800 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 82.16700 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 27.38900 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 136.94500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS B 0 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 35 130.96 -34.62 REMARK 500 HIS A 42 153.90 76.49 REMARK 500 ASP A 66 34.54 -81.64 REMARK 500 ARG A 113 -30.68 69.04 REMARK 500 HIS A 162 -132.47 58.74 REMARK 500 TRP A 164 128.90 10.50 REMARK 500 SER A 242 31.68 -84.42 REMARK 500 MET B 1 -29.43 -145.86 REMARK 500 PRO B 35 130.27 -33.76 REMARK 500 HIS B 42 157.97 76.74 REMARK 500 ASP B 66 35.49 -79.93 REMARK 500 ARG B 113 -30.27 69.22 REMARK 500 HIS B 162 -136.63 56.88 REMARK 500 ASP B 190 74.87 -119.03 REMARK 500 VAL B 240 -42.46 -130.37 REMARK 500 SER B 242 34.77 -82.19 REMARK 500 THR B 283 -28.60 152.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 303 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 162 ND1 REMARK 620 2 ANP A 302 PG 124.2 REMARK 620 3 ANP A 302 O2G 107.8 38.3 REMARK 620 4 ANP A 302 O3G 120.7 38.6 76.7 REMARK 620 5 ANP A 302 O2B 155.7 68.8 68.7 82.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 303 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 162 ND1 REMARK 620 2 ANP B 302 O2G 116.5 REMARK 620 3 ANP B 302 O2B 169.2 58.3 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6WB4 RELATED DB: PDB REMARK 900 SE-MET LABELED VERSION OF STRUCTURE DBREF 6WB5 A -19 299 PDB 6WB5 6WB5 -19 299 DBREF 6WB5 B -19 299 PDB 6WB5 6WB5 -19 299 SEQRES 1 A 319 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 319 LEU VAL PRO ARG GLY SER HIS MET THR GLN ALA ASP VAL SEQRES 3 A 319 LEU VAL VAL GLY GLY VAL GLY VAL ASP HIS ILE VAL ARG SEQRES 4 A 319 VAL LYS SER LEU PRO LEU PRO VAL VAL ASP SER MET MET SEQRES 5 A 319 VAL PRO PRO ILE VAL THR VAL VAL GLY HIS THR GLY ASN SEQRES 6 A 319 GLY VAL ALA LEU GLY VAL HIS ALA LEU GLY ARG ALA SER SEQRES 7 A 319 ALA MET ALA ASP VAL ILE GLY ASP ASP ALA GLU GLY ARG SEQRES 8 A 319 LEU ILE GLN ASP ALA TYR SER ALA ALA GLY ILE PRO ILE SEQRES 9 A 319 THR PHE VAL THR HIS ILE SER GLY THR ARG ARG SER VAL SEQRES 10 A 319 ASN LEU VAL THR GLU GLU GLY GLN ARG MET SER LEU TYR SEQRES 11 A 319 ASP PRO ARG HIS PRO PHE GLU PHE ILE PRO ASP PRO SER SEQRES 12 A 319 LEU TRP ARG GLU GLY ILE GLU ARG SER ARG HIS VAL HIS SEQRES 13 A 319 VAL SER ILE MET ASN TRP ALA ARG TYR ALA LEU ARG ASP SEQRES 14 A 319 ALA VAL ALA ALA GLY ARG SER THR SER THR ASP LEU HIS SEQRES 15 A 319 ASP TRP ASP GLY VAL ALA ASP TYR HIS LYS ASP PHE ALA SEQRES 16 A 319 TYR GLY ALA ASP TYR VAL PHE VAL SER ALA ALA ALA LEU SEQRES 17 A 319 ARG ASP GLU SER GLY VAL VAL ALA ASP VAL PHE ALA ARG SEQRES 18 A 319 GLY ARG ALA GLN PHE VAL VAL VAL MET ALA GLY SER GLU SEQRES 19 A 319 GLY ALA ARG VAL TRP ARG ARG SER ASP GLU LEU PRO LEU SEQRES 20 A 319 ARG ILE SER PRO ILE SER ILE PRO GLY ARG PRO VAL VAL SEQRES 21 A 319 ASP SER ASN GLY ALA GLY ASP SER PHE VAL ALA ALA PHE SEQRES 22 A 319 LEU CYS HIS TYR LEU ASP HIS GLY ASP ILE PHE GLY ALA SEQRES 23 A 319 ALA ARG ALA GLY ALA VAL GLY GLY ALA TRP ALA CYS GLY SEQRES 24 A 319 THR LEU GLY THR HIS THR SER PHE VAL ASP VAL GLU THR SEQRES 25 A 319 LEU GLU ARG LEU LEU ALA ARG SEQRES 1 B 319 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 319 LEU VAL PRO ARG GLY SER HIS MET THR GLN ALA ASP VAL SEQRES 3 B 319 LEU VAL VAL GLY GLY VAL GLY VAL ASP HIS ILE VAL ARG SEQRES 4 B 319 VAL LYS SER LEU PRO LEU PRO VAL VAL ASP SER MET MET SEQRES 5 B 319 VAL PRO PRO ILE VAL THR VAL VAL GLY HIS THR GLY ASN SEQRES 6 B 319 GLY VAL ALA LEU GLY VAL HIS ALA LEU GLY ARG ALA SER SEQRES 7 B 319 ALA MET ALA ASP VAL ILE GLY ASP ASP ALA GLU GLY ARG SEQRES 8 B 319 LEU ILE GLN ASP ALA TYR SER ALA ALA GLY ILE PRO ILE SEQRES 9 B 319 THR PHE VAL THR HIS ILE SER GLY THR ARG ARG SER VAL SEQRES 10 B 319 ASN LEU VAL THR GLU GLU GLY GLN ARG MET SER LEU TYR SEQRES 11 B 319 ASP PRO ARG HIS PRO PHE GLU PHE ILE PRO ASP PRO SER SEQRES 12 B 319 LEU TRP ARG GLU GLY ILE GLU ARG SER ARG HIS VAL HIS SEQRES 13 B 319 VAL SER ILE MET ASN TRP ALA ARG TYR ALA LEU ARG ASP SEQRES 14 B 319 ALA VAL ALA ALA GLY ARG SER THR SER THR ASP LEU HIS SEQRES 15 B 319 ASP TRP ASP GLY VAL ALA ASP TYR HIS LYS ASP PHE ALA SEQRES 16 B 319 TYR GLY ALA ASP TYR VAL PHE VAL SER ALA ALA ALA LEU SEQRES 17 B 319 ARG ASP GLU SER GLY VAL VAL ALA ASP VAL PHE ALA ARG SEQRES 18 B 319 GLY ARG ALA GLN PHE VAL VAL VAL MET ALA GLY SER GLU SEQRES 19 B 319 GLY ALA ARG VAL TRP ARG ARG SER ASP GLU LEU PRO LEU SEQRES 20 B 319 ARG ILE SER PRO ILE SER ILE PRO GLY ARG PRO VAL VAL SEQRES 21 B 319 ASP SER ASN GLY ALA GLY ASP SER PHE VAL ALA ALA PHE SEQRES 22 B 319 LEU CYS HIS TYR LEU ASP HIS GLY ASP ILE PHE GLY ALA SEQRES 23 B 319 ALA ARG ALA GLY ALA VAL GLY GLY ALA TRP ALA CYS GLY SEQRES 24 B 319 THR LEU GLY THR HIS THR SER PHE VAL ASP VAL GLU THR SEQRES 25 B 319 LEU GLU ARG LEU LEU ALA ARG HET GLC C 1 12 HET GLC C 2 11 HET AC1 C 3 21 HET GLC D 1 12 HET GLC D 2 11 HET AC1 D 3 21 HET ANP A 302 31 HET MN A 303 1 HET ANP B 302 31 HET MN B 303 1 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM AC1 4,6-DIDEOXY-4-{[(1S,4R,5S,6S)-4,5,6-TRIHYDROXY-3- HETNAM 2 AC1 (HYDROXYMETHYL)CYCLOHEX-2-EN-1-YL]AMINO}-ALPHA-D- HETNAM 3 AC1 GLUCOPYRANOSE HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETNAM MN MANGANESE (II) ION HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN AC1 6-METHYL-5-(4,5,6-TRIHYDROXY-3-HYDROXYMETHYL-CYCLOHEX- HETSYN 2 AC1 2-ENYLAMINO)-TETRAHYDRO-PYRAN-2,3,4-TRIOL; 4,6- HETSYN 3 AC1 DIDEOXY-4-{[(1S,4R,5S,6S)-4,5,6-TRIHYDROXY-3- HETSYN 4 AC1 (HYDROXYMETHYL)CYCLOHEX-2-EN-1-YL]AMINO}-ALPHA-D- HETSYN 5 AC1 GLUCOSE; 4,6-DIDEOXY-4-{[(1S,4R,5S,6S)-4,5,6- HETSYN 6 AC1 TRIHYDROXY-3-(HYDROXYMETHYL)CYCLOHEX-2-EN-1-YL]AMINO}- HETSYN 7 AC1 D-GLUCOSE; 4,6-DIDEOXY-4-{[(1S,4R,5S,6S)-4,5,6- HETSYN 8 AC1 TRIHYDROXY-3-(HYDROXYMETHYL)CYCLOHEX-2-EN-1-YL]AMINO}- HETSYN 9 AC1 GLUCOSE FORMUL 3 GLC 4(C6 H12 O6) FORMUL 3 AC1 2(C13 H23 N O8) FORMUL 5 ANP 2(C10 H17 N6 O12 P3) FORMUL 6 MN 2(MN 2+) HELIX 1 AA1 HIS A 42 LEU A 54 1 13 HELIX 2 AA2 ASP A 67 ALA A 80 1 14 HELIX 3 AA3 PRO A 122 ARG A 131 1 10 HELIX 4 AA4 TRP A 142 ALA A 153 1 12 HELIX 5 AA5 HIS A 171 ALA A 178 1 8 HELIX 6 AA6 ALA A 186 LEU A 188 5 3 HELIX 7 AA7 ASP A 190 GLY A 202 1 13 HELIX 8 AA8 GLY A 212 GLU A 214 5 3 HELIX 9 AA9 GLY A 244 GLY A 261 1 18 HELIX 10 AB1 ASP A 262 GLY A 279 1 18 HELIX 11 AB2 ASP A 289 ARG A 299 1 11 HELIX 12 AB3 HIS B 42 LEU B 54 1 13 HELIX 13 AB4 ASP B 67 ALA B 80 1 14 HELIX 14 AB5 PRO B 122 ARG B 131 1 10 HELIX 15 AB6 TRP B 142 ALA B 153 1 12 HELIX 16 AB7 ALA B 168 ALA B 178 1 11 HELIX 17 AB8 ALA B 186 LEU B 188 5 3 HELIX 18 AB9 ASP B 190 GLY B 202 1 13 HELIX 19 AC1 GLY B 212 GLU B 214 5 3 HELIX 20 AC2 GLY B 244 GLY B 261 1 18 HELIX 21 AC3 ASP B 262 GLY B 279 1 18 HELIX 22 AC4 ASP B 289 ARG B 299 1 11 SHEET 1 AA1 9 ILE A 84 HIS A 89 0 SHEET 2 AA1 9 SER A 58 GLY A 65 1 N MET A 60 O THR A 85 SHEET 3 AA1 9 ALA A 4 VAL A 9 1 N VAL A 8 O ALA A 59 SHEET 4 AA1 9 SER A 132 SER A 138 1 O HIS A 136 N LEU A 7 SHEET 5 AA1 9 SER A 156 ASP A 160 1 O SER A 158 N VAL A 137 SHEET 6 AA1 9 TYR A 180 SER A 184 1 O PHE A 182 N THR A 159 SHEET 7 AA1 9 PHE A 206 MET A 210 1 O VAL A 208 N VAL A 181 SHEET 8 AA1 9 ALA A 216 TRP A 219 -1 O ARG A 217 N VAL A 209 SHEET 9 AA1 9 LEU A 227 ILE A 229 -1 O ILE A 229 N ALA A 216 SHEET 1 AA2 5 VAL A 37 GLY A 41 0 SHEET 2 AA2 5 GLY A 13 VAL A 20 -1 N ASP A 15 O VAL A 39 SHEET 3 AA2 5 ARG A 95 THR A 101 1 O SER A 96 N HIS A 16 SHEET 4 AA2 5 ARG A 106 ASP A 111 -1 O MET A 107 N LEU A 99 SHEET 5 AA2 5 SER B 30 MET B 32 1 O MET B 31 N SER A 108 SHEET 1 AA3 5 SER A 30 MET A 32 0 SHEET 2 AA3 5 ARG B 106 ASP B 111 1 O SER B 108 N MET A 31 SHEET 3 AA3 5 ARG B 95 THR B 101 -1 N LEU B 99 O MET B 107 SHEET 4 AA3 5 GLY B 13 VAL B 20 1 N VAL B 20 O VAL B 100 SHEET 5 AA3 5 VAL B 37 GLY B 41 -1 O VAL B 39 N ASP B 15 SHEET 1 AA410 ARG B -3 GLY B -2 0 SHEET 2 AA410 ILE B 84 HIS B 89 -1 O PHE B 86 N ARG B -3 SHEET 3 AA410 SER B 58 GLY B 65 1 N MET B 60 O THR B 85 SHEET 4 AA410 ALA B 4 VAL B 9 1 N VAL B 8 O ALA B 59 SHEET 5 AA410 SER B 132 SER B 138 1 O HIS B 136 N LEU B 7 SHEET 6 AA410 SER B 156 ASP B 160 1 O SER B 158 N VAL B 137 SHEET 7 AA410 TYR B 180 SER B 184 1 O TYR B 180 N THR B 157 SHEET 8 AA410 PHE B 206 MET B 210 1 O VAL B 208 N VAL B 181 SHEET 9 AA410 ALA B 216 TRP B 219 -1 O ARG B 217 N VAL B 209 SHEET 10 AA410 LEU B 227 ILE B 229 -1 O ILE B 229 N ALA B 216 LINK O4 GLC C 1 C1 GLC C 2 1555 1555 1.43 LINK O4 GLC C 2 C1 AC1 C 3 1555 1555 1.43 LINK O4 GLC D 1 C1 GLC D 2 1555 1555 1.43 LINK O4 GLC D 2 C1 AC1 D 3 1555 1555 1.42 LINK ND1 HIS A 162 MN MN A 303 1555 1555 2.09 LINK PG ANP A 302 MN MN A 303 1555 1555 2.54 LINK O2G ANP A 302 MN MN A 303 1555 1555 2.11 LINK O3G ANP A 302 MN MN A 303 1555 1555 2.05 LINK O2B ANP A 302 MN MN A 303 1555 1555 2.44 LINK ND1 HIS B 162 MN MN B 303 1555 1555 2.17 LINK O2G ANP B 302 MN MN B 303 1555 1555 2.10 LINK O2B ANP B 302 MN MN B 303 1555 1555 1.96 CISPEP 1 LEU A 23 PRO A 24 0 9.26 CISPEP 2 LEU B 23 PRO B 24 0 14.50 CRYST1 86.551 86.551 164.334 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011554 0.006671 0.000000 0.00000 SCALE2 0.000000 0.013341 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006085 0.00000