HEADER FLUORESCENT PROTEIN 02-APR-20 6WEM TITLE CRIMSON 0.9 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MCRIMSON 0.9; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTACMAEA QUADRICOLOR; SOURCE 3 ORGANISM_TAXID: 6118; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FLUORESCENT PROTEIN, ENGINEERED PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.ATAIE,C.TRAN TANG,A.SENS,M.Z.LIN,J.CHU,H.L.NG REVDAT 3 15-NOV-23 6WEM 1 REMARK REVDAT 2 18-OCT-23 6WEM 1 REMARK REVDAT 1 07-APR-21 6WEM 0 JRNL AUTH N.ATAIE,C.TRAN TANG,A.SENS,M.Z.LIN,J.CHU JRNL TITL CRIMSON 0.9 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 53190 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.095 REMARK 3 FREE R VALUE TEST SET COUNT : 2710 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.04 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3346 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.56 REMARK 3 BIN R VALUE (WORKING SET) : 0.2840 REMARK 3 BIN FREE R VALUE SET COUNT : 164 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7128 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 203 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.87300 REMARK 3 B22 (A**2) : -0.49400 REMARK 3 B33 (A**2) : -0.37900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.240 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.188 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.146 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.626 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7461 ; 0.015 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 6775 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10081 ; 1.970 ; 1.673 REMARK 3 BOND ANGLES OTHERS (DEGREES): 15823 ; 1.409 ; 1.592 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 912 ; 7.677 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 373 ;34.443 ;23.137 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1279 ;13.823 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 33 ;13.162 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 910 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8364 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1551 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1256 ; 0.203 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 113 ; 0.287 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3338 ; 0.172 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 252 ; 0.150 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3627 ; 1.790 ; 2.142 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3626 ; 1.790 ; 2.141 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4546 ; 2.683 ; 3.196 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4547 ; 2.683 ; 3.197 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3834 ; 2.983 ; 2.594 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3835 ; 2.983 ; 2.595 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5535 ; 4.767 ; 3.723 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5535 ; 4.767 ; 3.723 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 232 REMARK 3 ORIGIN FOR THE GROUP (A): 58.4372 11.4971 34.7945 REMARK 3 T TENSOR REMARK 3 T11: 0.1312 T22: 0.0369 REMARK 3 T33: 0.1040 T12: 0.0190 REMARK 3 T13: 0.0080 T23: 0.0388 REMARK 3 L TENSOR REMARK 3 L11: 1.0130 L22: 1.2242 REMARK 3 L33: 1.0197 L12: -0.1589 REMARK 3 L13: 0.3065 L23: -0.3262 REMARK 3 S TENSOR REMARK 3 S11: 0.0399 S12: 0.1093 S13: 0.0295 REMARK 3 S21: -0.0998 S22: -0.0846 S23: -0.1224 REMARK 3 S31: -0.0263 S32: 0.1434 S33: 0.0446 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 7 B 232 REMARK 3 ORIGIN FOR THE GROUP (A): 55.1668 0.1228 62.6497 REMARK 3 T TENSOR REMARK 3 T11: 0.1614 T22: 0.0073 REMARK 3 T33: 0.0861 T12: 0.0011 REMARK 3 T13: -0.0270 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 1.4164 L22: 0.6883 REMARK 3 L33: 1.2579 L12: -0.0832 REMARK 3 L13: -0.1575 L23: -0.1297 REMARK 3 S TENSOR REMARK 3 S11: -0.0688 S12: -0.0769 S13: 0.0014 REMARK 3 S21: 0.0606 S22: 0.0447 S23: 0.0773 REMARK 3 S31: 0.1000 S32: -0.0016 S33: 0.0241 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 7 C 231 REMARK 3 ORIGIN FOR THE GROUP (A): 23.3167 1.2252 60.1084 REMARK 3 T TENSOR REMARK 3 T11: 0.1550 T22: 0.0846 REMARK 3 T33: 0.0099 T12: 0.0246 REMARK 3 T13: 0.0112 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 1.6921 L22: 1.1385 REMARK 3 L33: 1.1473 L12: 0.2932 REMARK 3 L13: 0.0845 L23: 0.3147 REMARK 3 S TENSOR REMARK 3 S11: -0.0133 S12: -0.3054 S13: 0.0048 REMARK 3 S21: 0.1650 S22: 0.0039 S23: 0.0596 REMARK 3 S31: 0.0648 S32: -0.1249 S33: 0.0094 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 8 D 231 REMARK 3 ORIGIN FOR THE GROUP (A): 27.0257 7.2036 30.4416 REMARK 3 T TENSOR REMARK 3 T11: 0.1555 T22: 0.0119 REMARK 3 T33: 0.0490 T12: 0.0147 REMARK 3 T13: -0.0048 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 1.3043 L22: 1.2452 REMARK 3 L33: 1.0925 L12: -0.0735 REMARK 3 L13: -0.2599 L23: 0.3981 REMARK 3 S TENSOR REMARK 3 S11: 0.0439 S12: 0.0845 S13: 0.0694 REMARK 3 S21: -0.2125 S22: -0.0183 S23: 0.0606 REMARK 3 S31: -0.1011 S32: -0.0894 S33: -0.0256 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 6WEM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000248088. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53213 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.040 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 7.050 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10800 REMARK 200 FOR THE DATA SET : 12.1200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.87400 REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3IP2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MGCL2, 0.1 M BIS-TRIS HCL PH REMARK 280 6.5, AND 25% PEG 3350, PH 7, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.77300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.75900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.02300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.75900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.77300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.02300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU B 6 REMARK 465 GLU C 6 REMARK 465 LEU C 232 REMARK 465 GLU D 6 REMARK 465 GLU D 7 REMARK 465 LEU D 232 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 95 CD GLU A 95 OE2 0.067 REMARK 500 GLU C 11 CD GLU C 11 OE1 0.114 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP D 163 N - CA - CB ANGL. DEV. = 12.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 73 42.00 -106.82 REMARK 500 LEU A 142 37.14 -144.59 REMARK 500 ASP B 60 -39.19 -37.30 REMARK 500 PHE B 73 40.56 -98.03 REMARK 500 ALA B 154 98.08 -161.10 REMARK 500 LEU C 142 31.39 -140.37 REMARK 500 ASP C 210 78.44 25.38 REMARK 500 ASN C 211 74.63 20.21 REMARK 500 PHE D 73 41.32 -97.19 REMARK 500 REMARK 500 REMARK: NULL DBREF 6WEM A 6 232 PDB 6WEM 6WEM 6 232 DBREF 6WEM B 6 232 PDB 6WEM 6WEM 6 232 DBREF 6WEM C 6 232 PDB 6WEM 6WEM 6 232 DBREF 6WEM D 6 232 PDB 6WEM 6WEM 6 232 SEQRES 1 A 225 GLU GLU LEU ILE LYS GLU ASN MET HIS SER LYS LEU TYR SEQRES 2 A 225 LEU GLU GLY SER VAL ASN GLY HIS GLN PHE LYS CYS THR SEQRES 3 A 225 HIS GLU GLY GLU GLY LYS PRO TYR GLU GLY THR GLN THR SEQRES 4 A 225 ASN ARG ILE LYS VAL VAL GLU GLY GLY PRO LEU PRO PHE SEQRES 5 A 225 ALA PHE ASP ILE LEU ALA THR MET PHE NRQ SER LYS ALA SEQRES 6 A 225 PHE ILE LYS TYR PRO LYS GLY LEU PRO ASP TYR PHE LYS SEQRES 7 A 225 GLN SER PHE PRO GLU GLY PHE THR TRP GLU ARG THR MET SEQRES 8 A 225 VAL PHE GLU ASP GLY GLY VAL LEU THR ALA THR GLN ASP SEQRES 9 A 225 THR SER LEU GLN ASP GLY CYS LEU ILE TYR ASN VAL LYS SEQRES 10 A 225 LEU ARG GLY VAL ASN PHE PRO ALA ASN GLY PRO VAL MET SEQRES 11 A 225 LYS GLN THR THR LEU GLY TRP GLU PRO SER THR GLU THR SEQRES 12 A 225 LEU TYR PRO ALA ASP GLY ALA LEU GLU GLY ARG CYS ASP SEQRES 13 A 225 MET ALA LEU LYS LEU VAL GLY GLY GLY HIS LEU HIS CYS SEQRES 14 A 225 ASN PHE LYS THR THR TYR LYS SER LYS LYS PRO ALA LYS SEQRES 15 A 225 ASN LEU LYS MET PRO GLY VAL HIS TYR VAL ASP ARG ARG SEQRES 16 A 225 LEU GLU ARG ILE LYS GLU ALA ASP ASN GLU THR TYR VAL SEQRES 17 A 225 GLU GLN HIS GLU VAL ALA VAL ALA ARG TYR CYS ASP LEU SEQRES 18 A 225 PRO SER LYS LEU SEQRES 1 B 225 GLU GLU LEU ILE LYS GLU ASN MET HIS SER LYS LEU TYR SEQRES 2 B 225 LEU GLU GLY SER VAL ASN GLY HIS GLN PHE LYS CYS THR SEQRES 3 B 225 HIS GLU GLY GLU GLY LYS PRO TYR GLU GLY THR GLN THR SEQRES 4 B 225 ASN ARG ILE LYS VAL VAL GLU GLY GLY PRO LEU PRO PHE SEQRES 5 B 225 ALA PHE ASP ILE LEU ALA THR MET PHE NRQ SER LYS ALA SEQRES 6 B 225 PHE ILE LYS TYR PRO LYS GLY LEU PRO ASP TYR PHE LYS SEQRES 7 B 225 GLN SER PHE PRO GLU GLY PHE THR TRP GLU ARG THR MET SEQRES 8 B 225 VAL PHE GLU ASP GLY GLY VAL LEU THR ALA THR GLN ASP SEQRES 9 B 225 THR SER LEU GLN ASP GLY CYS LEU ILE TYR ASN VAL LYS SEQRES 10 B 225 LEU ARG GLY VAL ASN PHE PRO ALA ASN GLY PRO VAL MET SEQRES 11 B 225 LYS GLN THR THR LEU GLY TRP GLU PRO SER THR GLU THR SEQRES 12 B 225 LEU TYR PRO ALA ASP GLY ALA LEU GLU GLY ARG CYS ASP SEQRES 13 B 225 MET ALA LEU LYS LEU VAL GLY GLY GLY HIS LEU HIS CYS SEQRES 14 B 225 ASN PHE LYS THR THR TYR LYS SER LYS LYS PRO ALA LYS SEQRES 15 B 225 ASN LEU LYS MET PRO GLY VAL HIS TYR VAL ASP ARG ARG SEQRES 16 B 225 LEU GLU ARG ILE LYS GLU ALA ASP ASN GLU THR TYR VAL SEQRES 17 B 225 GLU GLN HIS GLU VAL ALA VAL ALA ARG TYR CYS ASP LEU SEQRES 18 B 225 PRO SER LYS LEU SEQRES 1 C 225 GLU GLU LEU ILE LYS GLU ASN MET HIS SER LYS LEU TYR SEQRES 2 C 225 LEU GLU GLY SER VAL ASN GLY HIS GLN PHE LYS CYS THR SEQRES 3 C 225 HIS GLU GLY GLU GLY LYS PRO TYR GLU GLY THR GLN THR SEQRES 4 C 225 ASN ARG ILE LYS VAL VAL GLU GLY GLY PRO LEU PRO PHE SEQRES 5 C 225 ALA PHE ASP ILE LEU ALA THR MET PHE NRQ SER LYS ALA SEQRES 6 C 225 PHE ILE LYS TYR PRO LYS GLY LEU PRO ASP TYR PHE LYS SEQRES 7 C 225 GLN SER PHE PRO GLU GLY PHE THR TRP GLU ARG THR MET SEQRES 8 C 225 VAL PHE GLU ASP GLY GLY VAL LEU THR ALA THR GLN ASP SEQRES 9 C 225 THR SER LEU GLN ASP GLY CYS LEU ILE TYR ASN VAL LYS SEQRES 10 C 225 LEU ARG GLY VAL ASN PHE PRO ALA ASN GLY PRO VAL MET SEQRES 11 C 225 LYS GLN THR THR LEU GLY TRP GLU PRO SER THR GLU THR SEQRES 12 C 225 LEU TYR PRO ALA ASP GLY ALA LEU GLU GLY ARG CYS ASP SEQRES 13 C 225 MET ALA LEU LYS LEU VAL GLY GLY GLY HIS LEU HIS CYS SEQRES 14 C 225 ASN PHE LYS THR THR TYR LYS SER LYS LYS PRO ALA LYS SEQRES 15 C 225 ASN LEU LYS MET PRO GLY VAL HIS TYR VAL ASP ARG ARG SEQRES 16 C 225 LEU GLU ARG ILE LYS GLU ALA ASP ASN GLU THR TYR VAL SEQRES 17 C 225 GLU GLN HIS GLU VAL ALA VAL ALA ARG TYR CYS ASP LEU SEQRES 18 C 225 PRO SER LYS LEU SEQRES 1 D 225 GLU GLU LEU ILE LYS GLU ASN MET HIS SER LYS LEU TYR SEQRES 2 D 225 LEU GLU GLY SER VAL ASN GLY HIS GLN PHE LYS CYS THR SEQRES 3 D 225 HIS GLU GLY GLU GLY LYS PRO TYR GLU GLY THR GLN THR SEQRES 4 D 225 ASN ARG ILE LYS VAL VAL GLU GLY GLY PRO LEU PRO PHE SEQRES 5 D 225 ALA PHE ASP ILE LEU ALA THR MET PHE NRQ SER LYS ALA SEQRES 6 D 225 PHE ILE LYS TYR PRO LYS GLY LEU PRO ASP TYR PHE LYS SEQRES 7 D 225 GLN SER PHE PRO GLU GLY PHE THR TRP GLU ARG THR MET SEQRES 8 D 225 VAL PHE GLU ASP GLY GLY VAL LEU THR ALA THR GLN ASP SEQRES 9 D 225 THR SER LEU GLN ASP GLY CYS LEU ILE TYR ASN VAL LYS SEQRES 10 D 225 LEU ARG GLY VAL ASN PHE PRO ALA ASN GLY PRO VAL MET SEQRES 11 D 225 LYS GLN THR THR LEU GLY TRP GLU PRO SER THR GLU THR SEQRES 12 D 225 LEU TYR PRO ALA ASP GLY ALA LEU GLU GLY ARG CYS ASP SEQRES 13 D 225 MET ALA LEU LYS LEU VAL GLY GLY GLY HIS LEU HIS CYS SEQRES 14 D 225 ASN PHE LYS THR THR TYR LYS SER LYS LYS PRO ALA LYS SEQRES 15 D 225 ASN LEU LYS MET PRO GLY VAL HIS TYR VAL ASP ARG ARG SEQRES 16 D 225 LEU GLU ARG ILE LYS GLU ALA ASP ASN GLU THR TYR VAL SEQRES 17 D 225 GLU GLN HIS GLU VAL ALA VAL ALA ARG TYR CYS ASP LEU SEQRES 18 D 225 PRO SER LYS LEU HET NRQ A 67 23 HET NRQ B 67 23 HET NRQ C 67 23 HET NRQ D 67 23 HETNAM NRQ {(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO) HETNAM 2 NRQ PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 NRQ YL}ACETIC ACID HETSYN NRQ CHROMOPHORE (MET-TYR-GLY) FORMUL 1 NRQ 4(C16 H17 N3 O4 S) FORMUL 5 HOH *203(H2 O) HELIX 1 AA1 ALA A 58 PHE A 66 5 9 HELIX 2 AA2 ASP A 82 SER A 87 1 6 HELIX 3 AA3 PRO A 187 LEU A 191 5 5 HELIX 4 AA4 ALA B 58 PHE B 66 5 9 HELIX 5 AA5 PHE B 84 PHE B 88 5 5 HELIX 6 AA6 GLY B 134 GLN B 139 1 6 HELIX 7 AA7 PRO B 187 LEU B 191 5 5 HELIX 8 AA8 ALA C 58 PHE C 66 5 9 HELIX 9 AA9 SER C 70 ILE C 74 5 5 HELIX 10 AB1 ASP C 82 SER C 87 1 6 HELIX 11 AB2 PRO C 187 LEU C 191 5 5 HELIX 12 AB3 ALA D 58 PHE D 66 5 9 HELIX 13 AB4 PHE D 84 PHE D 88 5 5 HELIX 14 AB5 GLY D 134 GLN D 139 1 6 HELIX 15 AB6 PRO D 187 LEU D 191 5 5 SHEET 1 AA113 THR A 141 TRP A 144 0 SHEET 2 AA113 ALA A 157 LEU A 168 -1 O LYS A 167 N GLY A 143 SHEET 3 AA113 HIS A 173 SER A 184 -1 O TYR A 182 N LEU A 158 SHEET 4 AA113 PHE A 92 PHE A 100 -1 N THR A 93 O LYS A 183 SHEET 5 AA113 VAL A 105 GLN A 115 -1 O ALA A 108 N ARG A 96 SHEET 6 AA113 CYS A 118 VAL A 128 -1 O ILE A 120 N SER A 113 SHEET 7 AA113 MET A 13 VAL A 23 1 N TYR A 18 O VAL A 123 SHEET 8 AA113 HIS A 26 LYS A 37 -1 O CYS A 30 N LEU A 19 SHEET 9 AA113 THR A 42 GLU A 51 -1 O THR A 44 N GLU A 35 SHEET 10 AA113 TYR A 214 ARG A 224 -1 O VAL A 215 N ILE A 47 SHEET 11 AA113 HIS A 197 ALA A 209 -1 N ILE A 206 O GLU A 216 SHEET 12 AA113 SER A 147 ALA A 154 -1 N LEU A 151 O HIS A 197 SHEET 13 AA113 ALA A 157 LEU A 168 -1 O GLU A 159 N TYR A 152 SHEET 1 AA213 THR B 141 TRP B 144 0 SHEET 2 AA213 ALA B 157 LEU B 168 -1 O LYS B 167 N GLY B 143 SHEET 3 AA213 HIS B 173 SER B 184 -1 O TYR B 182 N LEU B 158 SHEET 4 AA213 PHE B 92 PHE B 100 -1 N VAL B 99 O ASN B 177 SHEET 5 AA213 VAL B 105 GLN B 115 -1 O THR B 112 N PHE B 92 SHEET 6 AA213 CYS B 118 VAL B 128 -1 O ILE B 120 N SER B 113 SHEET 7 AA213 MET B 13 VAL B 23 1 N TYR B 18 O VAL B 123 SHEET 8 AA213 HIS B 26 LYS B 37 -1 O PHE B 28 N GLY B 21 SHEET 9 AA213 THR B 42 GLU B 51 -1 O THR B 44 N GLU B 35 SHEET 10 AA213 TYR B 214 ARG B 224 -1 O VAL B 215 N ILE B 47 SHEET 11 AA213 HIS B 197 ALA B 209 -1 N GLU B 204 O HIS B 218 SHEET 12 AA213 SER B 147 ALA B 154 -1 N SER B 147 O ARG B 201 SHEET 13 AA213 ALA B 157 LEU B 168 -1 O GLU B 159 N TYR B 152 SHEET 1 AA313 THR C 141 TRP C 144 0 SHEET 2 AA313 ALA C 157 LEU C 168 -1 O LYS C 167 N GLY C 143 SHEET 3 AA313 HIS C 173 SER C 184 -1 O TYR C 182 N LEU C 158 SHEET 4 AA313 PHE C 92 PHE C 100 -1 N VAL C 99 O ASN C 177 SHEET 5 AA313 VAL C 105 GLN C 115 -1 O GLN C 110 N TRP C 94 SHEET 6 AA313 CYS C 118 VAL C 128 -1 O ILE C 120 N SER C 113 SHEET 7 AA313 MET C 13 VAL C 23 1 N SER C 22 O GLY C 127 SHEET 8 AA313 HIS C 26 LYS C 37 -1 O GLY C 34 N SER C 15 SHEET 9 AA313 THR C 42 GLU C 51 -1 O LYS C 48 N THR C 31 SHEET 10 AA313 TYR C 214 ARG C 224 -1 O VAL C 215 N ILE C 47 SHEET 11 AA313 HIS C 197 ALA C 209 -1 N GLU C 204 O HIS C 218 SHEET 12 AA313 SER C 147 ALA C 154 -1 N LEU C 151 O HIS C 197 SHEET 13 AA313 ALA C 157 LEU C 168 -1 O GLU C 159 N TYR C 152 SHEET 1 AA413 THR D 141 TRP D 144 0 SHEET 2 AA413 ALA D 157 LEU D 168 -1 O LYS D 167 N GLY D 143 SHEET 3 AA413 HIS D 173 SER D 184 -1 O TYR D 182 N LEU D 158 SHEET 4 AA413 PHE D 92 PHE D 100 -1 N THR D 97 O LYS D 179 SHEET 5 AA413 VAL D 105 GLN D 115 -1 O ALA D 108 N ARG D 96 SHEET 6 AA413 CYS D 118 VAL D 128 -1 O ILE D 120 N SER D 113 SHEET 7 AA413 MET D 13 VAL D 23 1 N SER D 22 O GLY D 127 SHEET 8 AA413 HIS D 26 LYS D 37 -1 O GLY D 34 N SER D 15 SHEET 9 AA413 THR D 42 GLU D 51 -1 O LYS D 48 N THR D 31 SHEET 10 AA413 TYR D 214 ARG D 224 -1 O VAL D 215 N ILE D 47 SHEET 11 AA413 HIS D 197 ALA D 209 -1 N LYS D 207 O GLU D 216 SHEET 12 AA413 SER D 147 ALA D 154 -1 N SER D 147 O ARG D 201 SHEET 13 AA413 ALA D 157 LEU D 168 -1 O ALA D 157 N ALA D 154 LINK C PHE A 66 N1 NRQ A 67 1555 1555 1.30 LINK C3 NRQ A 67 N SER A 70 1555 1555 1.30 LINK C PHE B 66 N1 NRQ B 67 1555 1555 1.33 LINK C3 NRQ B 67 N SER B 70 1555 1555 1.28 LINK C PHE C 66 N1 NRQ C 67 1555 1555 1.27 LINK C3 NRQ C 67 N SER C 70 1555 1555 1.29 LINK C PHE D 66 N1 NRQ D 67 1555 1555 1.25 LINK C3 NRQ D 67 N SER D 70 1555 1555 1.28 CISPEP 1 GLY A 53 PRO A 54 0 -9.35 CISPEP 2 PHE A 88 PRO A 89 0 10.22 CISPEP 3 GLY B 53 PRO B 54 0 -8.48 CISPEP 4 PHE B 88 PRO B 89 0 6.38 CISPEP 5 GLY C 53 PRO C 54 0 -2.26 CISPEP 6 PHE C 88 PRO C 89 0 5.81 CISPEP 7 GLY D 53 PRO D 54 0 -2.88 CISPEP 8 PHE D 88 PRO D 89 0 8.81 CRYST1 71.546 90.046 129.518 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013977 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011105 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007721 0.00000