HEADER PLANT PROTEIN/DNA 09-APR-20 6WIG TITLE STRUCTURE OF STENOFOLIA PROTEIN HD DOMAIN BOUND WITH DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: STENOFOLIA; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'- COMPND 7 D(P*GP*CP*AP*AP*AP*TP*TP*AP*AP*TP*GP*AP*TP*TP*TP*AP*TP*TP*CP*AP*AP*G) COMPND 8 -3'); COMPND 9 CHAIN: C; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'- COMPND 13 D(P*CP*TP*TP*GP*AP*AP*TP*AP*AP*AP*TP*CP*AP*TP*TP*AP*AP*TP*TP*TP*GP*C) COMPND 14 -3'); COMPND 15 CHAIN: D; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MEDICAGO TRUNCATULA; SOURCE 3 ORGANISM_COMMON: BARREL MEDIC; SOURCE 4 ORGANISM_TAXID: 3880; SOURCE 5 GENE: STF; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: MEDICAGO TRUNCATULA; SOURCE 11 ORGANISM_TAXID: 3880; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: MEDICAGO TRUNCATULA; SOURCE 15 ORGANISM_TAXID: 3880 KEYWDS STF, HD DOMAIN, WOX, TRANSCRIPTIONAL FACTOR, PLANT PROTEIN, PLANT KEYWDS 2 PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.DENG,S.PENG,P.PATHAK REVDAT 2 23-FEB-22 6WIG 1 JRNL REVDAT 1 11-AUG-21 6WIG 0 JRNL AUTH P.K.PATHAK,F.ZHANG,S.PENG,L.NIU,J.CHATURVEDI,J.ELLIOTT, JRNL AUTH 2 Y.XIANG,M.TADEGE,J.DENG JRNL TITL STRUCTURE OF THE UNIQUE TETRAMERIC STENOFOLIA HOMEODOMAIN JRNL TITL 2 BOUND WITH TARGET PROMOTER DNA. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 77 1050 2021 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 34342278 JRNL DOI 10.1107/S205979832100632X REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 3 NUMBER OF REFLECTIONS : 17488 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1731 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.1000 - 4.8173 0.99 1425 156 0.1587 0.1857 REMARK 3 2 4.8173 - 3.8242 0.99 1367 148 0.1539 0.2229 REMARK 3 3 3.8242 - 3.3409 0.98 1380 154 0.1693 0.2507 REMARK 3 4 3.3409 - 3.0355 0.97 1346 134 0.2211 0.2868 REMARK 3 5 3.0355 - 2.8180 0.98 1358 157 0.2379 0.2890 REMARK 3 6 2.8180 - 2.6519 0.99 1356 158 0.2404 0.2692 REMARK 3 7 2.6519 - 2.5191 1.00 1381 149 0.2464 0.2929 REMARK 3 8 2.5191 - 2.4094 0.98 1346 149 0.2433 0.3147 REMARK 3 9 2.4094 - 2.3167 0.95 1312 145 0.2668 0.3213 REMARK 3 10 2.3167 - 2.2367 0.92 1266 139 0.2803 0.3393 REMARK 3 11 2.2367 - 2.1668 0.85 1158 138 0.3031 0.3507 REMARK 3 12 2.1668 - 2.1050 0.76 1062 104 0.3077 0.4147 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2322 REMARK 3 ANGLE : 1.214 3313 REMARK 3 CHIRALITY : 0.066 353 REMARK 3 PLANARITY : 0.007 277 REMARK 3 DIHEDRAL : 29.879 1246 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 89 THROUGH 100 ) REMARK 3 ORIGIN FOR THE GROUP (A): 83.5350 38.7050 38.1273 REMARK 3 T TENSOR REMARK 3 T11: 0.5400 T22: 0.7099 REMARK 3 T33: 0.5306 T12: 0.0724 REMARK 3 T13: -0.0943 T23: -0.0306 REMARK 3 L TENSOR REMARK 3 L11: 6.1251 L22: 0.1369 REMARK 3 L33: 4.9810 L12: 0.3137 REMARK 3 L13: 5.2457 L23: 0.2898 REMARK 3 S TENSOR REMARK 3 S11: 0.1239 S12: 0.1347 S13: -0.6414 REMARK 3 S21: -0.1892 S22: 0.5796 S23: 0.3281 REMARK 3 S31: 0.7440 S32: 0.5226 S33: -0.5260 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 101 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): 75.9930 55.5457 33.3328 REMARK 3 T TENSOR REMARK 3 T11: 0.5087 T22: 0.3427 REMARK 3 T33: 0.5944 T12: -0.1163 REMARK 3 T13: 0.0277 T23: -0.0770 REMARK 3 L TENSOR REMARK 3 L11: 8.4938 L22: 4.5155 REMARK 3 L33: 7.2306 L12: -3.1919 REMARK 3 L13: 2.0442 L23: -3.2755 REMARK 3 S TENSOR REMARK 3 S11: -0.2020 S12: -0.3980 S13: 1.7159 REMARK 3 S21: 0.8500 S22: 0.1765 S23: -0.3364 REMARK 3 S31: -0.8194 S32: 0.1092 S33: 0.1392 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 113 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): 78.4477 52.2042 22.9925 REMARK 3 T TENSOR REMARK 3 T11: 0.4546 T22: 0.4620 REMARK 3 T33: 0.4789 T12: -0.1444 REMARK 3 T13: 0.0024 T23: 0.0866 REMARK 3 L TENSOR REMARK 3 L11: 7.7477 L22: 3.7298 REMARK 3 L33: 5.3312 L12: 1.6499 REMARK 3 L13: 1.3393 L23: 1.4123 REMARK 3 S TENSOR REMARK 3 S11: -0.1250 S12: 1.3618 S13: 0.5464 REMARK 3 S21: -0.7748 S22: 0.2801 S23: -0.4553 REMARK 3 S31: -0.7003 S32: 0.7029 S33: -0.0091 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 133 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 84.8032 46.2592 30.8592 REMARK 3 T TENSOR REMARK 3 T11: 0.3820 T22: 0.6639 REMARK 3 T33: 0.7558 T12: -0.1426 REMARK 3 T13: -0.2356 T23: 0.0820 REMARK 3 L TENSOR REMARK 3 L11: 5.8493 L22: 0.2678 REMARK 3 L33: 6.7848 L12: 0.8294 REMARK 3 L13: -6.0748 L23: -1.1257 REMARK 3 S TENSOR REMARK 3 S11: -1.0899 S12: -0.4516 S13: 0.4070 REMARK 3 S21: 0.1528 S22: -0.7696 S23: -0.5183 REMARK 3 S31: -0.1611 S32: -0.3426 S33: -0.0559 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.5170 47.8553 31.9255 REMARK 3 T TENSOR REMARK 3 T11: 0.4126 T22: 0.3770 REMARK 3 T33: 0.3043 T12: -0.0208 REMARK 3 T13: -0.0153 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 9.3849 L22: 6.2147 REMARK 3 L33: 3.8495 L12: -3.1583 REMARK 3 L13: -4.7526 L23: 1.5879 REMARK 3 S TENSOR REMARK 3 S11: 0.1740 S12: -0.6123 S13: 0.0157 REMARK 3 S21: 0.4014 S22: 0.0385 S23: 0.3499 REMARK 3 S31: -0.4932 S32: -0.0067 S33: -0.1589 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 162 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.0710 61.6085 47.8730 REMARK 3 T TENSOR REMARK 3 T11: 1.0947 T22: 0.8120 REMARK 3 T33: 0.7609 T12: 0.1876 REMARK 3 T13: -0.0675 T23: 0.0595 REMARK 3 L TENSOR REMARK 3 L11: 9.2796 L22: 2.6603 REMARK 3 L33: 2.7827 L12: -2.8565 REMARK 3 L13: -2.7489 L23: 2.6703 REMARK 3 S TENSOR REMARK 3 S11: 0.6894 S12: 0.7117 S13: -0.0861 REMARK 3 S21: -0.5169 S22: -0.0494 S23: 0.4355 REMARK 3 S31: 0.1566 S32: -0.1787 S33: -1.0238 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 92 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): 66.9302 28.4285 2.9950 REMARK 3 T TENSOR REMARK 3 T11: 0.6811 T22: 0.5075 REMARK 3 T33: 0.4550 T12: -0.0343 REMARK 3 T13: 0.0180 T23: -0.1189 REMARK 3 L TENSOR REMARK 3 L11: 8.9917 L22: 4.8389 REMARK 3 L33: 7.8597 L12: 1.3899 REMARK 3 L13: 0.3859 L23: -0.8954 REMARK 3 S TENSOR REMARK 3 S11: -0.1867 S12: 0.6945 S13: -0.1612 REMARK 3 S21: -1.6327 S22: 0.5899 S23: 0.9703 REMARK 3 S31: 0.7725 S32: -0.2911 S33: -0.0650 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 113 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): 75.0043 25.6305 12.2211 REMARK 3 T TENSOR REMARK 3 T11: 0.5171 T22: 0.5123 REMARK 3 T33: 0.8150 T12: 0.0066 REMARK 3 T13: 0.0447 T23: -0.0666 REMARK 3 L TENSOR REMARK 3 L11: 6.4240 L22: 6.5935 REMARK 3 L33: 2.5346 L12: -0.5257 REMARK 3 L13: -0.5731 L23: -0.3741 REMARK 3 S TENSOR REMARK 3 S11: 0.0563 S12: -0.5740 S13: -0.5574 REMARK 3 S21: 0.0694 S22: 0.4034 S23: -1.4437 REMARK 3 S31: 0.8748 S32: 0.6561 S33: -0.1992 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 132 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 75.2450 31.1196 1.3769 REMARK 3 T TENSOR REMARK 3 T11: 0.9876 T22: 0.8183 REMARK 3 T33: 0.6957 T12: -0.0630 REMARK 3 T13: 0.2150 T23: -0.2440 REMARK 3 L TENSOR REMARK 3 L11: 1.8858 L22: 2.5368 REMARK 3 L33: 2.7198 L12: -1.0080 REMARK 3 L13: 1.3467 L23: -2.5974 REMARK 3 S TENSOR REMARK 3 S11: -0.6439 S12: 0.9054 S13: 0.3845 REMARK 3 S21: -1.2725 S22: -0.2571 S23: -0.9602 REMARK 3 S31: -0.0814 S32: 0.9462 S33: -0.2219 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 138 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 60.1917 28.2254 14.4974 REMARK 3 T TENSOR REMARK 3 T11: 0.4746 T22: 0.3532 REMARK 3 T33: 0.3831 T12: 0.0340 REMARK 3 T13: -0.0541 T23: -0.0273 REMARK 3 L TENSOR REMARK 3 L11: 4.2454 L22: 5.1824 REMARK 3 L33: 7.6827 L12: 4.7065 REMARK 3 L13: -3.5908 L23: -4.1301 REMARK 3 S TENSOR REMARK 3 S11: -0.2399 S12: -0.5324 S13: 0.5583 REMARK 3 S21: -0.4234 S22: 0.2855 S23: 0.5786 REMARK 3 S31: 0.3967 S32: -0.0009 S33: -0.1806 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.8445 38.9691 -6.2986 REMARK 3 T TENSOR REMARK 3 T11: 0.6378 T22: 0.4441 REMARK 3 T33: 0.4328 T12: -0.0028 REMARK 3 T13: -0.1308 T23: -0.0139 REMARK 3 L TENSOR REMARK 3 L11: 9.1286 L22: 3.9641 REMARK 3 L33: 4.9158 L12: -3.1962 REMARK 3 L13: 6.2506 L23: -3.5244 REMARK 3 S TENSOR REMARK 3 S11: -0.2162 S12: -0.0758 S13: -0.4752 REMARK 3 S21: 0.6415 S22: 0.3379 S23: -0.2334 REMARK 3 S31: -0.9335 S32: -0.1814 S33: -0.2930 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 11 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.7400 37.9575 27.0028 REMARK 3 T TENSOR REMARK 3 T11: 0.2656 T22: 0.3209 REMARK 3 T33: 0.3772 T12: -0.0436 REMARK 3 T13: 0.0085 T23: -0.0238 REMARK 3 L TENSOR REMARK 3 L11: 1.4922 L22: 3.2341 REMARK 3 L33: 9.4757 L12: -0.6788 REMARK 3 L13: 2.2685 L23: -1.4273 REMARK 3 S TENSOR REMARK 3 S11: -0.1831 S12: 0.1494 S13: 0.0506 REMARK 3 S21: 0.1747 S22: 0.2393 S23: 0.0568 REMARK 3 S31: -0.6937 S32: 0.1153 S33: -0.0648 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 5 ) REMARK 3 ORIGIN FOR THE GROUP (A): 69.2569 41.1508 38.3835 REMARK 3 T TENSOR REMARK 3 T11: 0.2995 T22: 0.3545 REMARK 3 T33: 0.3811 T12: -0.0246 REMARK 3 T13: -0.0191 T23: -0.0137 REMARK 3 L TENSOR REMARK 3 L11: 7.7209 L22: 3.2933 REMARK 3 L33: 4.2208 L12: -2.5163 REMARK 3 L13: 4.1620 L23: 0.8134 REMARK 3 S TENSOR REMARK 3 S11: -0.2823 S12: -0.2925 S13: 0.1717 REMARK 3 S21: 0.3489 S22: -0.3464 S23: 0.0512 REMARK 3 S31: -0.7431 S32: -0.1089 S33: 0.7194 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 6 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.7864 38.7493 15.9533 REMARK 3 T TENSOR REMARK 3 T11: 0.5105 T22: 0.4349 REMARK 3 T33: 0.4158 T12: 0.0200 REMARK 3 T13: -0.0907 T23: 0.0255 REMARK 3 L TENSOR REMARK 3 L11: 5.8774 L22: 5.9606 REMARK 3 L33: 2.5774 L12: 1.2255 REMARK 3 L13: 2.2146 L23: 0.6864 REMARK 3 S TENSOR REMARK 3 S11: 0.4611 S12: 0.0273 S13: -0.0215 REMARK 3 S21: -0.6196 S22: 0.3548 S23: 0.6613 REMARK 3 S31: -0.1798 S32: 0.0873 S33: -0.6958 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 16 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.7986 37.2723 -8.8384 REMARK 3 T TENSOR REMARK 3 T11: 0.5731 T22: 0.4279 REMARK 3 T33: 0.4357 T12: 0.0365 REMARK 3 T13: -0.1060 T23: -0.0523 REMARK 3 L TENSOR REMARK 3 L11: 6.0338 L22: 4.4160 REMARK 3 L33: 6.0617 L12: 1.9602 REMARK 3 L13: 1.4739 L23: 0.9999 REMARK 3 S TENSOR REMARK 3 S11: 0.0291 S12: -0.2012 S13: -0.7363 REMARK 3 S21: 0.3062 S22: 0.2713 S23: -0.1325 REMARK 3 S31: 0.4530 S32: 0.1476 S33: -0.1703 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WIG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000248267. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-AUG-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97935 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17541 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : 0.08000 REMARK 200 FOR THE DATA SET : 4.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.66200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: .15 M SODIUM CHLORIDE 28 % V/V PEG REMARK 280 SMEAR MEDIUM, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 24.74450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 124.40262 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -24.74450 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 66.94903 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 85 REMARK 465 ASN A 86 REMARK 465 PRO A 87 REMARK 465 SER A 88 REMARK 465 LYS A 173 REMARK 465 LYS A 174 REMARK 465 ASP A 175 REMARK 465 LEU A 176 REMARK 465 GLY A 177 REMARK 465 ALA A 178 REMARK 465 SER A 179 REMARK 465 ARG A 180 REMARK 465 THR A 181 REMARK 465 VAL A 182 REMARK 465 PHE A 183 REMARK 465 GLU A 184 REMARK 465 VAL A 185 REMARK 465 GLU A 186 REMARK 465 HIS A 187 REMARK 465 THR A 188 REMARK 465 LYS A 189 REMARK 465 ASN A 190 REMARK 465 ASN B 85 REMARK 465 ASN B 86 REMARK 465 PRO B 87 REMARK 465 SER B 88 REMARK 465 ALA B 89 REMARK 465 ALA B 90 REMARK 465 VAL B 91 REMARK 465 MET B 160 REMARK 465 GLU B 161 REMARK 465 SER B 162 REMARK 465 ALA B 163 REMARK 465 ALA B 164 REMARK 465 ALA B 165 REMARK 465 GLU B 166 REMARK 465 PHE B 167 REMARK 465 ASP B 168 REMARK 465 SER B 169 REMARK 465 ALA B 170 REMARK 465 ILE B 171 REMARK 465 GLU B 172 REMARK 465 LYS B 173 REMARK 465 LYS B 174 REMARK 465 ASP B 175 REMARK 465 LEU B 176 REMARK 465 GLY B 177 REMARK 465 ALA B 178 REMARK 465 SER B 179 REMARK 465 ARG B 180 REMARK 465 THR B 181 REMARK 465 VAL B 182 REMARK 465 PHE B 183 REMARK 465 GLU B 184 REMARK 465 VAL B 185 REMARK 465 GLU B 186 REMARK 465 HIS B 187 REMARK 465 THR B 188 REMARK 465 LYS B 189 REMARK 465 ASN B 190 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 102 CD OE1 OE2 REMARK 480 ARG A 105 CG CD REMARK 480 ARG A 112 CD REMARK 480 ARG A 113 CZ NH1 NH2 REMARK 480 GLU A 121 CG CD OE1 OE2 REMARK 480 LYS A 135 CD CE NZ REMARK 480 GLU A 137 CD OE1 OE2 REMARK 480 LYS A 155 CE NZ REMARK 480 GLU A 161 CD OE1 OE2 REMARK 480 SER A 162 OG REMARK 480 VAL B 92 CG1 CG2 REMARK 480 SER B 94 CB OG REMARK 480 GLU B 102 CD OE1 OE2 REMARK 480 ARG B 105 CD REMARK 480 ARG B 112 CG CD REMARK 480 GLU B 121 CD OE1 OE2 REMARK 480 LYS B 139 CE NZ REMARK 480 DG C 1 P OP1 OP2 REMARK 480 DC D 1 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OP1 DT D 7 O HOH D 101 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT D 3 O3' DT D 3 C3' -0.042 REMARK 500 DT D 14 O3' DT D 14 C3' -0.046 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT C 10 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DT C 15 O4' - C1' - N1 ANGL. DEV. = -4.2 DEGREES REMARK 500 DA D 6 O4' - C1' - N9 ANGL. DEV. = 3.9 DEGREES REMARK 500 DT D 18 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 116 -40.58 -132.87 REMARK 500 ILE A 136 144.84 -174.75 REMARK 500 ILE B 136 145.86 -178.71 REMARK 500 REMARK 500 REMARK: NULL DBREF 6WIG A 85 190 UNP G0ZGT3 G0ZGT3_MEDTR 85 190 DBREF 6WIG B 85 190 UNP G0ZGT3 G0ZGT3_MEDTR 85 190 DBREF 6WIG C 1 22 PDB 6WIG 6WIG 1 22 DBREF 6WIG D 1 22 PDB 6WIG 6WIG 1 22 SEQRES 1 A 106 ASN ASN PRO SER ALA ALA VAL VAL VAL SER SER ARG TRP SEQRES 2 A 106 ASN PRO THR PRO GLU GLN LEU ARG ALA LEU GLU GLU LEU SEQRES 3 A 106 TYR ARG ARG GLY THR ARG THR PRO SER ALA GLU GLN ILE SEQRES 4 A 106 GLN GLN ILE THR ALA GLN LEU ARG LYS PHE GLY LYS ILE SEQRES 5 A 106 GLU GLY LYS ASN VAL PHE TYR TRP PHE GLN ASN HIS LYS SEQRES 6 A 106 ALA ARG GLU ARG GLN LYS ARG ARG ARG GLN MET GLU SER SEQRES 7 A 106 ALA ALA ALA GLU PHE ASP SER ALA ILE GLU LYS LYS ASP SEQRES 8 A 106 LEU GLY ALA SER ARG THR VAL PHE GLU VAL GLU HIS THR SEQRES 9 A 106 LYS ASN SEQRES 1 B 106 ASN ASN PRO SER ALA ALA VAL VAL VAL SER SER ARG TRP SEQRES 2 B 106 ASN PRO THR PRO GLU GLN LEU ARG ALA LEU GLU GLU LEU SEQRES 3 B 106 TYR ARG ARG GLY THR ARG THR PRO SER ALA GLU GLN ILE SEQRES 4 B 106 GLN GLN ILE THR ALA GLN LEU ARG LYS PHE GLY LYS ILE SEQRES 5 B 106 GLU GLY LYS ASN VAL PHE TYR TRP PHE GLN ASN HIS LYS SEQRES 6 B 106 ALA ARG GLU ARG GLN LYS ARG ARG ARG GLN MET GLU SER SEQRES 7 B 106 ALA ALA ALA GLU PHE ASP SER ALA ILE GLU LYS LYS ASP SEQRES 8 B 106 LEU GLY ALA SER ARG THR VAL PHE GLU VAL GLU HIS THR SEQRES 9 B 106 LYS ASN SEQRES 1 C 22 DG DC DA DA DA DT DT DA DA DT DG DA DT SEQRES 2 C 22 DT DT DA DT DT DC DA DA DG SEQRES 1 D 22 DC DT DT DG DA DA DT DA DA DA DT DC DA SEQRES 2 D 22 DT DT DA DA DT DT DT DG DC FORMUL 5 HOH *44(H2 O) HELIX 1 AA1 THR A 100 ARG A 113 1 14 HELIX 2 AA2 SER A 119 ARG A 131 1 13 HELIX 3 AA3 GLU A 137 GLU A 161 1 25 HELIX 4 AA4 ALA A 164 ILE A 171 1 8 HELIX 5 AA5 THR B 100 ARG B 113 1 14 HELIX 6 AA6 SER B 119 ARG B 131 1 13 HELIX 7 AA7 LYS B 132 GLY B 134 5 3 HELIX 8 AA8 GLU B 137 ARG B 157 1 21 CRYST1 48.061 49.489 69.810 90.00 106.46 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020807 0.000000 0.006148 0.00000 SCALE2 0.000000 0.020207 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014937 0.00000