HEADER IMMUNE SYSTEM 11-APR-20 6WIY TITLE CRYSTAL STRUCTURE OF FAB 54-1G05 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB 54-1G05 HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB 54-1G05 LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS ANTIBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR N.C.WU,I.A.WILSON REVDAT 4 18-OCT-23 6WIY 1 REMARK REVDAT 3 23-SEP-20 6WIY 1 JRNL REVDAT 2 15-JUL-20 6WIY 1 JRNL REVDAT 1 01-JUL-20 6WIY 0 JRNL AUTH N.C.WU,S.F.ANDREWS,J.E.RAAB,S.O'CONNELL,C.A.SCHRAMM,X.DING, JRNL AUTH 2 M.J.CHAMBERS,K.LEUNG,L.WANG,Y.ZHANG,J.R.MASCOLA,D.C.DOUEK, JRNL AUTH 3 J.E.LEDGERWOOD,A.B.MCDERMOTT,I.A.WILSON JRNL TITL CONVERGENT EVOLUTION IN BREADTH OF TWO VH6-1-ENCODED JRNL TITL 2 INFLUENZA ANTIBODY CLONOTYPES FROM A SINGLE DONOR. JRNL REF CELL HOST MICROBE V. 28 434 2020 JRNL REFN ESSN 1934-6069 JRNL PMID 32619441 JRNL DOI 10.1016/J.CHOM.2020.06.003 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 62652 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 3082 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.2580 - 4.6231 1.00 2938 164 0.1507 0.1773 REMARK 3 2 4.6231 - 3.6699 1.00 2821 138 0.1230 0.1450 REMARK 3 3 3.6699 - 3.2061 1.00 2758 153 0.1448 0.1728 REMARK 3 4 3.2061 - 2.9130 1.00 2760 137 0.1580 0.1937 REMARK 3 5 2.9130 - 2.7043 1.00 2775 133 0.1674 0.2018 REMARK 3 6 2.7043 - 2.5448 1.00 2732 134 0.1711 0.1830 REMARK 3 7 2.5448 - 2.4174 1.00 2751 135 0.1691 0.2050 REMARK 3 8 2.4174 - 2.3122 1.00 2719 150 0.1672 0.1851 REMARK 3 9 2.3122 - 2.2231 1.00 2695 146 0.1651 0.2226 REMARK 3 10 2.2231 - 2.1464 0.99 2730 124 0.1620 0.2153 REMARK 3 11 2.1464 - 2.0793 1.00 2666 152 0.1623 0.1937 REMARK 3 12 2.0793 - 2.0199 0.99 2703 136 0.1591 0.1930 REMARK 3 13 2.0199 - 1.9667 0.99 2641 169 0.1571 0.1814 REMARK 3 14 1.9667 - 1.9187 0.99 2699 132 0.1577 0.1994 REMARK 3 15 1.9187 - 1.8751 0.99 2686 147 0.1660 0.2015 REMARK 3 16 1.8751 - 1.8352 0.99 2667 134 0.1713 0.2102 REMARK 3 17 1.8352 - 1.7985 0.99 2669 122 0.1756 0.2239 REMARK 3 18 1.7985 - 1.7645 0.99 2703 130 0.1909 0.2276 REMARK 3 19 1.7645 - 1.7330 0.98 2645 120 0.1898 0.1925 REMARK 3 20 1.7330 - 1.7036 0.98 2667 138 0.2017 0.2364 REMARK 3 21 1.7036 - 1.6762 0.98 2627 162 0.2284 0.2412 REMARK 3 22 1.6762 - 1.6504 0.94 2518 126 0.2484 0.2972 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN H AND RESID 1:131) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5606 -14.3303 12.9974 REMARK 3 T TENSOR REMARK 3 T11: 0.1614 T22: 0.1247 REMARK 3 T33: 0.1489 T12: 0.0109 REMARK 3 T13: 0.0110 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 1.4249 L22: 0.8069 REMARK 3 L33: 0.9404 L12: 0.4091 REMARK 3 L13: -0.1312 L23: -0.2232 REMARK 3 S TENSOR REMARK 3 S11: -0.0051 S12: -0.0539 S13: -0.0654 REMARK 3 S21: -0.0073 S22: -0.0152 S23: 0.0237 REMARK 3 S31: 0.1805 S32: -0.0015 S33: 0.0330 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN H AND RESID 132:213) REMARK 3 ORIGIN FOR THE GROUP (A): 25.2128 7.8639 24.2495 REMARK 3 T TENSOR REMARK 3 T11: 0.1591 T22: 0.2361 REMARK 3 T33: 0.1770 T12: 0.0115 REMARK 3 T13: -0.0560 T23: -0.0348 REMARK 3 L TENSOR REMARK 3 L11: 1.9394 L22: 1.8784 REMARK 3 L33: 4.1718 L12: -0.3306 REMARK 3 L13: -0.6373 L23: 0.9425 REMARK 3 S TENSOR REMARK 3 S11: -0.0900 S12: -0.3768 S13: 0.1072 REMARK 3 S21: 0.3961 S22: 0.0738 S23: -0.1904 REMARK 3 S31: 0.0591 S32: 0.1784 S33: -0.0082 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN L AND RESID 1:108) REMARK 3 ORIGIN FOR THE GROUP (A): -6.1519 -2.9184 14.5710 REMARK 3 T TENSOR REMARK 3 T11: 0.1089 T22: 0.1324 REMARK 3 T33: 0.1331 T12: -0.0020 REMARK 3 T13: -0.0041 T23: 0.0028 REMARK 3 L TENSOR REMARK 3 L11: 1.2757 L22: 3.6312 REMARK 3 L33: 2.4509 L12: 0.3729 REMARK 3 L13: 0.0062 L23: 1.2645 REMARK 3 S TENSOR REMARK 3 S11: -0.0153 S12: 0.0199 S13: -0.0000 REMARK 3 S21: -0.0689 S22: -0.0247 S23: 0.1689 REMARK 3 S31: 0.0280 S32: -0.1754 S33: 0.0422 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN L AND RESID 109:213) REMARK 3 ORIGIN FOR THE GROUP (A): 21.8544 22.2910 17.1260 REMARK 3 T TENSOR REMARK 3 T11: 0.1757 T22: 0.1925 REMARK 3 T33: 0.2322 T12: -0.0297 REMARK 3 T13: -0.0132 T23: -0.0358 REMARK 3 L TENSOR REMARK 3 L11: 3.3696 L22: 1.7875 REMARK 3 L33: 1.6908 L12: 0.0670 REMARK 3 L13: -1.0972 L23: 0.2040 REMARK 3 S TENSOR REMARK 3 S11: 0.0128 S12: 0.0043 S13: 0.2621 REMARK 3 S21: -0.0469 S22: 0.0520 S23: -0.3366 REMARK 3 S31: -0.2150 S32: 0.2190 S33: -0.0393 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WIY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000248364. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62699 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 12.30 REMARK 200 R MERGE FOR SHELL (I) : 0.86200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4FQH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 8000, 0.2 M NACL, AND 0.1 M REMARK 280 PHOSPHATE-CITRATE PH 4.2, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.54600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.82250 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.54600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.82250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH H 653 LIES ON A SPECIAL POSITION. REMARK 375 HOH L 667 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS H 214 REMARK 465 SER H 215 REMARK 465 CYS H 216 REMARK 465 LYS H 217 REMARK 465 SER H 218 REMARK 465 CYS H 219 REMARK 465 CYS L 214 REMARK 465 CYS L 215 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LEU H 45 N CA C O CB CG CD1 REMARK 480 LEU H 45 CD2 REMARK 480 LEU L 96 N CA C O CB CG CD1 REMARK 480 LEU L 96 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH H 632 O HOH L 569 1.99 REMARK 500 NZ LYS H 117 O HOH H 401 2.08 REMARK 500 O HOH H 671 O HOH H 693 2.08 REMARK 500 O HOH L 402 O HOH L 685 2.11 REMARK 500 O HOH H 611 O HOH H 649 2.14 REMARK 500 O HOH H 652 O HOH H 654 2.15 REMARK 500 O HOH H 577 O HOH H 602 2.15 REMARK 500 O HOH L 494 O HOH L 632 2.16 REMARK 500 O HOH H 420 O HOH H 587 2.17 REMARK 500 O HOH L 455 O HOH L 668 2.17 REMARK 500 O HOH L 403 O HOH L 637 2.19 REMARK 500 O HOH L 454 O HOH L 572 2.19 REMARK 500 O HOH L 574 O HOH L 686 2.19 REMARK 500 O HOH L 493 O HOH L 659 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH L 612 O HOH L 641 1655 2.01 REMARK 500 O HOH H 661 O HOH L 621 3555 2.14 REMARK 500 O HOH L 504 O HOH L 612 1455 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER H 7 150.47 -49.69 REMARK 500 SER H 15 -8.73 83.17 REMARK 500 SER H 53 -9.62 67.33 REMARK 500 SER H 127 170.84 -59.97 REMARK 500 ASP H 144 53.81 70.41 REMARK 500 THR L 51 -44.87 70.93 REMARK 500 ALA L 84 168.66 178.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH H 706 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH L 723 DISTANCE = 6.20 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 301 DBREF 6WIY H 1 219 PDB 6WIY 6WIY 1 219 DBREF 6WIY L 1 215 PDB 6WIY 6WIY 1 215 SEQRES 1 H 233 GLN VAL GLN LEU GLN GLN SER GLY PRO ARG LEU VAL LYS SEQRES 2 H 233 PRO SER GLN THR LEU SER LEU THR CYS ALA ILE SER GLY SEQRES 3 H 233 ASP SER VAL SER SER SER SER ALA VAL TRP THR TRP ILE SEQRES 4 H 233 ARG GLN SER PRO SER ARG GLY LEU GLU TRP LEU GLY ARG SEQRES 5 H 233 THR TYR TYR ARG SER LYS TRP TYR ASP ASP TYR ALA VAL SEQRES 6 H 233 SER VAL GLN GLY ARG ILE THR ILE ASN PRO ASP THR SER SEQRES 7 H 233 LYS ASN GLN ILE SER LEU GLN LEU ASN SER VAL THR PRO SEQRES 8 H 233 ASP ASP THR ALA VAL TYR TYR CYS ALA ARG SER SER ILE SEQRES 9 H 233 ASN ILE PHE GLY VAL PHE VAL MET ALA MET ASP VAL TRP SEQRES 10 H 233 GLY GLN GLY THR ALA VAL THR VAL SER SER PRO SER THR SEQRES 11 H 233 LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SEQRES 12 H 233 SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL SEQRES 13 H 233 LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SEQRES 14 H 233 SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA SEQRES 15 H 233 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 16 H 233 VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR SEQRES 17 H 233 ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL SEQRES 18 H 233 ASP LYS ARG VAL GLU PRO LYS SER CYS LYS SER CYS SEQRES 1 L 218 GLU ILE VAL LEU THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 L 218 SER PRO GLY GLU ARG VAL THR LEU SER CYS ARG ALA SER SEQRES 3 L 218 GLN THR VAL TYR ASN SER TYR LEU ALA TRP TYR GLN GLN SEQRES 4 L 218 LYS PRO GLY GLN ALA PRO THR LEU LEU ILE TYR GLY THR SEQRES 5 L 218 SER THR ARG ALA THR GLY VAL PRO ASP ARG PHE SER GLY SEQRES 6 L 218 SER GLY SER GLY THR VAL PHE THR LEU THR ILE SER ARG SEQRES 7 L 218 LEU GLU PRO GLU ASP PHE ALA VAL TYR PHE CYS GLN GLN SEQRES 8 L 218 TYR SER THR SER PRO ARG ALA LEU THR PHE GLY GLY GLY SEQRES 9 L 218 THR LYS VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER SEQRES 10 L 218 VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER SEQRES 11 L 218 GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR SEQRES 12 L 218 PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA SEQRES 13 L 218 LEU GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN SEQRES 14 L 218 ASP SER LYS ASP SER THR TYR SER LEU SER SER THR LEU SEQRES 15 L 218 THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR SEQRES 16 L 218 ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL SEQRES 17 L 218 THR LYS SER PHE ASN ARG GLY GLU CYS CYS HET GOL H 301 14 HET GOL H 302 14 HET GOL H 303 14 HET GOL H 304 14 HET GOL L 301 14 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 5(C3 H8 O3) FORMUL 8 HOH *629(H2 O) HELIX 1 AA1 THR H 83 THR H 87 5 5 HELIX 2 AA2 SER H 128 SER H 132 5 5 HELIX 3 AA3 SER H 156 ALA H 158 5 3 HELIX 4 AA4 SER H 187 LEU H 189 5 3 HELIX 5 AA5 LYS H 201 ASN H 204 5 4 HELIX 6 AA6 TYR L 30 SER L 31 5 3 HELIX 7 AA7 GLU L 79 PHE L 83 5 5 HELIX 8 AA8 SER L 121 LYS L 126 1 6 HELIX 9 AA9 LYS L 183 HIS L 189 1 7 SHEET 1 AA1 4 GLN H 3 GLN H 6 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O ALA H 23 N GLN H 5 SHEET 3 AA1 4 GLN H 77 LEU H 82 -1 O LEU H 82 N LEU H 18 SHEET 4 AA1 4 ILE H 67 ASP H 72 -1 N ASP H 72 O GLN H 77 SHEET 1 AA2 6 ARG H 10 VAL H 12 0 SHEET 2 AA2 6 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA2 6 ALA H 88 SER H 95 -1 N TYR H 90 O THR H 107 SHEET 4 AA2 6 VAL H 33 SER H 40 -1 N ILE H 37 O TYR H 91 SHEET 5 AA2 6 GLY H 44 TYR H 52A-1 O GLU H 46 N ARG H 38 SHEET 6 AA2 6 TRP H 55 TYR H 59 -1 O ASP H 58 N ARG H 50 SHEET 1 AA3 4 ARG H 10 VAL H 12 0 SHEET 2 AA3 4 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA3 4 ALA H 88 SER H 95 -1 N TYR H 90 O THR H 107 SHEET 4 AA3 4 VAL H 102 TRP H 103 -1 O VAL H 102 N ARG H 94 SHEET 1 AA4 2 ASN H 98 ILE H 99 0 SHEET 2 AA4 2 VAL H 100B PHE H 100C-1 O VAL H 100B N ILE H 99 SHEET 1 AA5 4 SER H 120 LEU H 124 0 SHEET 2 AA5 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA5 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AA5 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AA6 4 SER H 120 LEU H 124 0 SHEET 2 AA6 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA6 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AA6 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AA7 3 THR H 151 TRP H 154 0 SHEET 2 AA7 3 ILE H 195 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 AA7 3 THR H 205 ARG H 210 -1 O VAL H 207 N VAL H 198 SHEET 1 AA8 4 LEU L 4 SER L 7 0 SHEET 2 AA8 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA8 4 VAL L 70 ILE L 75 -1 O LEU L 73 N LEU L 21 SHEET 4 AA8 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AA9 6 THR L 10 LEU L 13 0 SHEET 2 AA9 6 THR L 102 ILE L 106 1 O GLU L 105 N LEU L 11 SHEET 3 AA9 6 ALA L 84 SER L 92 -1 N TYR L 86 O THR L 102 SHEET 4 AA9 6 LEU L 33 GLN L 38 -1 N TYR L 36 O PHE L 87 SHEET 5 AA9 6 THR L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AA9 6 THR L 53 ARG L 54 -1 O THR L 53 N TYR L 49 SHEET 1 AB1 4 THR L 10 LEU L 13 0 SHEET 2 AB1 4 THR L 102 ILE L 106 1 O GLU L 105 N LEU L 11 SHEET 3 AB1 4 ALA L 84 SER L 92 -1 N TYR L 86 O THR L 102 SHEET 4 AB1 4 ALA L 95B PHE L 98 -1 O ALA L 95B N SER L 92 SHEET 1 AB2 4 SER L 114 PHE L 118 0 SHEET 2 AB2 4 THR L 129 PHE L 139 -1 O VAL L 133 N PHE L 118 SHEET 3 AB2 4 TYR L 173 SER L 182 -1 O LEU L 179 N VAL L 132 SHEET 4 AB2 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AB3 4 ALA L 153 LEU L 154 0 SHEET 2 AB3 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB3 4 VAL L 191 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 AB3 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.07 SSBOND 2 CYS H 140 CYS H 196 1555 1555 2.03 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.07 SSBOND 4 CYS L 134 CYS L 194 1555 1555 2.03 CISPEP 1 PHE H 146 PRO H 147 0 -6.97 CISPEP 2 GLU H 148 PRO H 149 0 -0.26 CISPEP 3 SER L 7 PRO L 8 0 -9.45 CISPEP 4 SER L 94 PRO L 95 0 -5.95 CISPEP 5 TYR L 140 PRO L 141 0 1.79 SITE 1 AC1 10 PHE H 166 PRO H 167 VAL H 169 SER H 177 SITE 2 AC1 10 LEU H 178 SER H 179 HOH H 421 SER L 162 SITE 3 AC1 10 SER L 176 THR L 178 SITE 1 AC2 10 ASP H 27 SER H 31 SER H 31B ARG H 94 SITE 2 AC2 10 HOH H 562 HOH H 568 PRO L 15 PRO L 80 SITE 3 AC2 10 LYS L 169 SER L 171 SITE 1 AC3 6 ARG H 50 ARG H 52B PHE H 100C HOH H 555 SITE 2 AC3 6 ARG L 95A HOH L 460 SITE 1 AC4 5 SER H 30 HOH H 498 HOH H 533 HOH H 588 SITE 2 AC4 5 GLU L 79 SITE 1 AC5 5 GLN L 37 LYS L 39 PRO L 59 HOH L 424 SITE 2 AC5 5 HOH L 482 CRYST1 60.909 79.092 107.645 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016418 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012644 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009290 0.00000