HEADER DNA BINDING PROTEIN 14-APR-20 6WJO TITLE CRYSTAL STRUCTURE OF WILD-TYPE ARGININE REPRESSOR FROM THE PATHOGENIC TITLE 2 BACTERIUM CORYNEBACTERIUM PSEUDOTUBERCULOSIS BOUND TO TYROSINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGININE REPRESSOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM PSEUDOTUBERCULOSIS (STRAIN SOURCE 3 C231); SOURCE 4 ORGANISM_TAXID: 681645; SOURCE 5 STRAIN: C231; SOURCE 6 GENE: ARGR, CPC231_0953; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS ENZYME SPECIFICITY, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.F.Z.NASCIMENTO,J.E.HERNANDEZ-GONZALEZ,M.A.B.DE MORAIS,M.T.MURAKAMI, AUTHOR 2 C.M.A.CARARETO,R.K.ARNI,R.B.MARIUTTI REVDAT 2 18-OCT-23 6WJO 1 LINK REVDAT 1 22-APR-20 6WJO 0 JRNL AUTH R.B.MARIUTTI,J.E.HERNANDEZ-GONZALEZ,A.F.Z.NASCIMENTO, JRNL AUTH 2 M.A.B.DE MORAIS,M.T.MURAKAMI,C.M.A.CARARETO,R.K.ARNI JRNL TITL A SINGLE P115Q MUTATION MODULATES SPECIFICITY IN THE JRNL TITL 2 CORYNEBACTERIUM PSEUDOTUBERCULOSIS ARGININE REPRESSOR. JRNL REF BIOCHIM BIOPHYS ACTA GEN V.1864 29597 2020 JRNL REF 2 SUBJ JRNL REFN ISSN 1872-8006 JRNL PMID 32156582 JRNL DOI 10.1016/J.BBAGEN.2020.129597 REMARK 2 REMARK 2 RESOLUTION. 1.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.540 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 21368 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1083 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 11.7368 - 3.3687 0.95 2639 135 0.1668 0.1612 REMARK 3 2 3.3687 - 2.6844 0.95 2546 143 0.1627 0.2049 REMARK 3 3 2.6844 - 2.3482 0.96 2547 103 0.1597 0.2130 REMARK 3 4 2.3482 - 2.1349 0.94 2501 147 0.1597 0.2108 REMARK 3 5 2.1349 - 1.9826 0.95 2525 132 0.1567 0.1969 REMARK 3 6 1.9826 - 1.8662 0.96 2532 112 0.2042 0.2402 REMARK 3 7 1.8662 - 1.7731 0.94 2461 148 0.2924 0.3181 REMARK 3 8 1.7731 - 1.6961 0.93 2464 158 0.3804 0.4121 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.54 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.4600 REMARK 3 OPERATOR: L,-K,H REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1224 REMARK 3 ANGLE : 0.901 1651 REMARK 3 CHIRALITY : 0.051 189 REMARK 3 PLANARITY : 0.006 218 REMARK 3 DIHEDRAL : 9.813 739 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 82:94 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.235 18.723 -8.760 REMARK 3 T TENSOR REMARK 3 T11: 0.2769 T22: 0.1871 REMARK 3 T33: 0.2804 T12: 0.0059 REMARK 3 T13: 0.0764 T23: -0.0648 REMARK 3 L TENSOR REMARK 3 L11: 3.6430 L22: 4.6368 REMARK 3 L33: 3.1768 L12: -1.1336 REMARK 3 L13: 0.4394 L23: -0.0895 REMARK 3 S TENSOR REMARK 3 S11: 0.0182 S12: 0.1084 S13: -0.4949 REMARK 3 S21: -0.1680 S22: -0.2200 S23: -0.1548 REMARK 3 S31: 0.5101 S32: -0.0683 S33: 0.2419 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 95:108 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.555 36.070 -8.942 REMARK 3 T TENSOR REMARK 3 T11: 0.0948 T22: 0.1213 REMARK 3 T33: 0.1714 T12: 0.0141 REMARK 3 T13: 0.0119 T23: -0.0177 REMARK 3 L TENSOR REMARK 3 L11: 3.6302 L22: 5.3695 REMARK 3 L33: 2.3226 L12: 2.9277 REMARK 3 L13: 0.4968 L23: 0.0997 REMARK 3 S TENSOR REMARK 3 S11: -0.1559 S12: 0.0444 S13: 0.0413 REMARK 3 S21: -0.0605 S22: 0.1037 S23: 0.2527 REMARK 3 S31: -0.0310 S32: -0.1399 S33: 0.0648 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 109:143 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.172 29.448 -1.482 REMARK 3 T TENSOR REMARK 3 T11: 0.1171 T22: 0.0944 REMARK 3 T33: 0.0912 T12: 0.0249 REMARK 3 T13: 0.0030 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 1.5350 L22: 0.9384 REMARK 3 L33: 0.8157 L12: 0.0885 REMARK 3 L13: -0.5346 L23: -0.0348 REMARK 3 S TENSOR REMARK 3 S11: -0.0617 S12: 0.0737 S13: -0.0486 REMARK 3 S21: 0.0067 S22: 0.0850 S23: -0.1126 REMARK 3 S31: 0.2162 S32: 0.0563 S33: -0.0068 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 144:148 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.278 37.561 -8.052 REMARK 3 T TENSOR REMARK 3 T11: 0.1514 T22: 0.3855 REMARK 3 T33: 0.3046 T12: -0.0372 REMARK 3 T13: -0.0005 T23: 0.0844 REMARK 3 L TENSOR REMARK 3 L11: 4.2334 L22: 1.6791 REMARK 3 L33: 4.1020 L12: -2.6058 REMARK 3 L13: 4.1425 L23: -2.4896 REMARK 3 S TENSOR REMARK 3 S11: -0.0245 S12: 0.0665 S13: -0.0644 REMARK 3 S21: -0.1448 S22: 0.0883 S23: -0.2218 REMARK 3 S31: 0.0429 S32: 0.2951 S33: -0.0866 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 149:160 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.633 30.114 -13.930 REMARK 3 T TENSOR REMARK 3 T11: 0.1533 T22: 0.2243 REMARK 3 T33: 0.1403 T12: 0.0661 REMARK 3 T13: 0.0173 T23: -0.0183 REMARK 3 L TENSOR REMARK 3 L11: 0.7658 L22: 4.4151 REMARK 3 L33: 0.7744 L12: -0.4520 REMARK 3 L13: 0.1460 L23: 0.0794 REMARK 3 S TENSOR REMARK 3 S11: 0.0027 S12: 0.1184 S13: 0.0831 REMARK 3 S21: -0.3973 S22: 0.0744 S23: -0.0049 REMARK 3 S31: 0.0439 S32: 0.1817 S33: -0.0507 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN B AND RESID 84:94 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.374 13.814 -3.147 REMARK 3 T TENSOR REMARK 3 T11: 0.5300 T22: 0.3535 REMARK 3 T33: 0.2769 T12: -0.0711 REMARK 3 T13: -0.0318 T23: -0.0934 REMARK 3 L TENSOR REMARK 3 L11: 1.3899 L22: 1.2180 REMARK 3 L33: 1.9986 L12: 0.1163 REMARK 3 L13: -0.7990 L23: -0.1651 REMARK 3 S TENSOR REMARK 3 S11: 0.0766 S12: 0.4296 S13: -0.1651 REMARK 3 S21: -0.4081 S22: 0.0308 S23: 0.2050 REMARK 3 S31: 0.0352 S32: 0.0620 S33: -0.1001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN B AND RESID 95:143 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.597 18.983 8.876 REMARK 3 T TENSOR REMARK 3 T11: 0.1311 T22: 0.1089 REMARK 3 T33: 0.1148 T12: -0.0233 REMARK 3 T13: -0.0068 T23: -0.0069 REMARK 3 L TENSOR REMARK 3 L11: 1.8183 L22: 1.1914 REMARK 3 L33: 0.9453 L12: 0.5554 REMARK 3 L13: -0.4890 L23: -0.2999 REMARK 3 S TENSOR REMARK 3 S11: -0.0114 S12: 0.0522 S13: -0.2153 REMARK 3 S21: -0.1172 S22: 0.0138 S23: -0.0021 REMARK 3 S31: 0.1836 S32: -0.1418 S33: -0.0129 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN B AND RESID 144:159 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.299 10.814 10.813 REMARK 3 T TENSOR REMARK 3 T11: 0.2136 T22: 0.1471 REMARK 3 T33: 0.2603 T12: -0.0625 REMARK 3 T13: 0.0049 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 3.1761 L22: 3.5948 REMARK 3 L33: 2.2362 L12: -1.1574 REMARK 3 L13: 0.2344 L23: 0.3971 REMARK 3 S TENSOR REMARK 3 S11: 0.1345 S12: 0.0655 S13: -0.2479 REMARK 3 S21: -0.2056 S22: -0.0317 S23: -0.0975 REMARK 3 S31: 0.3114 S32: -0.1492 S33: -0.1052 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN A AND RESID 201:201 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.478 28.532 5.501 REMARK 3 T TENSOR REMARK 3 T11: 0.1703 T22: 0.1753 REMARK 3 T33: 0.0836 T12: -0.0298 REMARK 3 T13: -0.0126 T23: -0.0310 REMARK 3 L TENSOR REMARK 3 L11: 2.5158 L22: 3.8434 REMARK 3 L33: 8.3980 L12: 2.4955 REMARK 3 L13: -1.8599 L23: 1.2521 REMARK 3 S TENSOR REMARK 3 S11: -0.0568 S12: -0.0685 S13: -0.0480 REMARK 3 S21: -0.1263 S22: 0.1318 S23: -0.0207 REMARK 3 S31: 0.0005 S32: 0.0587 S33: -0.0749 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN B AND RESID 201:201 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.862 28.184 6.205 REMARK 3 T TENSOR REMARK 3 T11: 0.1903 T22: 0.1873 REMARK 3 T33: 0.1107 T12: -0.0395 REMARK 3 T13: 0.0728 T23: 0.0766 REMARK 3 L TENSOR REMARK 3 L11: 1.3068 L22: 0.8990 REMARK 3 L33: 0.3814 L12: -0.1444 REMARK 3 L13: 0.1456 L23: 0.5518 REMARK 3 S TENSOR REMARK 3 S11: -0.0149 S12: -0.0017 S13: 0.0177 REMARK 3 S21: -0.0132 S22: 0.0122 S23: 0.0250 REMARK 3 S31: -0.0113 S32: -0.0275 S33: -0.0373 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WJO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000248236. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.4586 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21903 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.690 REMARK 200 RESOLUTION RANGE LOW (A) : 48.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 11.80 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.9700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 9.10 REMARK 200 R MERGE FOR SHELL (I) : 1.13100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.740 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5JVO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M SODIUM FORMATE, PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 41.49500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.49500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.49500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 41.49500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.49500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.49500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 41.49500 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 41.49500 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 41.49500 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 41.49500 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 41.49500 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 41.49500 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 41.49500 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 41.49500 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 41.49500 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 41.49500 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 41.49500 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 41.49500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -115.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 41.49500 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 41.49500 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 -41.49500 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 41.49500 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NA NA A 204 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 318 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 161 REMARK 465 GLY A 162 REMARK 465 ASN A 163 REMARK 465 GLY B 82 REMARK 465 THR B 83 REMARK 465 ARG B 160 REMARK 465 SER B 161 REMARK 465 GLY B 162 REMARK 465 ASN B 163 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 331 O HOH B 334 2.12 REMARK 500 O GLY B 112 O HOH B 301 2.13 REMARK 500 O HOH A 322 O HOH A 327 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 319 O HOH B 334 11455 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 344 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH A 345 DISTANCE = 6.51 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 204 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 134 O REMARK 620 2 ALA A 134 O 0.0 REMARK 620 3 HOH A 323 O 62.0 62.0 REMARK 620 4 HOH A 323 O 112.4 112.4 80.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 203 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 136 OD1 REMARK 620 2 TYR A 201 OH 16.0 REMARK 620 3 HOH A 310 O 116.0 126.8 REMARK 620 4 HOH A 324 O 132.6 133.2 94.5 REMARK 620 5 HOH B 333 O 136.6 120.7 100.8 60.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TYR A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TYR B 201 DBREF 6WJO A 82 163 UNP D9QA55 D9QA55_CORP2 82 163 DBREF 6WJO B 82 163 UNP D9QA55 D9QA55_CORP2 82 163 SEQRES 1 A 82 GLY THR ARG GLU LYS LEU ARG LYS MET LEU ASP ASP LEU SEQRES 2 A 82 LEU VAL SER VAL ASP HIS SER GLY ASN ILE ALA VAL LEU SEQRES 3 A 82 ARG THR PRO PRO GLY GLY ALA PRO PHE LEU ALA SER PHE SEQRES 4 A 82 ILE ASP ARG VAL GLY MET GLU GLU VAL VAL GLY THR ILE SEQRES 5 A 82 ALA GLY ASP ASP THR VAL PHE VAL LEU ALA ARG ASP PRO SEQRES 6 A 82 MET THR GLY GLN GLU LEU GLY GLU PHE LEU SER GLN ARG SEQRES 7 A 82 ARG SER GLY ASN SEQRES 1 B 82 GLY THR ARG GLU LYS LEU ARG LYS MET LEU ASP ASP LEU SEQRES 2 B 82 LEU VAL SER VAL ASP HIS SER GLY ASN ILE ALA VAL LEU SEQRES 3 B 82 ARG THR PRO PRO GLY GLY ALA PRO PHE LEU ALA SER PHE SEQRES 4 B 82 ILE ASP ARG VAL GLY MET GLU GLU VAL VAL GLY THR ILE SEQRES 5 B 82 ALA GLY ASP ASP THR VAL PHE VAL LEU ALA ARG ASP PRO SEQRES 6 B 82 MET THR GLY GLN GLU LEU GLY GLU PHE LEU SER GLN ARG SEQRES 7 B 82 ARG SER GLY ASN HET TYR A 201 13 HET SO4 A 202 5 HET NA A 203 1 HET NA A 204 1 HET TYR B 201 13 HETNAM TYR TYROSINE HETNAM SO4 SULFATE ION HETNAM NA SODIUM ION FORMUL 3 TYR 2(C9 H11 N O3) FORMUL 4 SO4 O4 S 2- FORMUL 5 NA 2(NA 1+) FORMUL 8 HOH *86(H2 O) HELIX 1 AA1 GLY A 82 LEU A 95 1 14 HELIX 2 AA2 GLY A 112 VAL A 124 1 13 HELIX 3 AA3 THR A 148 ARG A 160 1 13 HELIX 4 AA4 GLU B 85 LEU B 95 1 11 HELIX 5 AA5 GLY B 113 GLY B 125 1 13 HELIX 6 AA6 THR B 148 ARG B 159 1 12 SHEET 1 AA1 4 SER A 97 SER A 101 0 SHEET 2 AA1 4 ILE A 104 ARG A 108 -1 O VAL A 106 N ASP A 99 SHEET 3 AA1 4 THR A 138 ALA A 143 -1 O VAL A 141 N ALA A 105 SHEET 4 AA1 4 VAL A 129 ALA A 134 -1 N VAL A 130 O LEU A 142 SHEET 1 AA2 4 SER B 97 SER B 101 0 SHEET 2 AA2 4 ILE B 104 ARG B 108 -1 O ARG B 108 N SER B 97 SHEET 3 AA2 4 THR B 138 ALA B 143 -1 O VAL B 141 N ALA B 105 SHEET 4 AA2 4 VAL B 129 ALA B 134 -1 N GLY B 131 O LEU B 142 LINK O ALA A 134 NA NA A 204 1555 1555 3.02 LINK O ALA A 134 NA NA A 204 1555 8555 3.02 LINK OD1 ASP A 136 NA NA A 203 1555 1555 2.64 LINK OH TYR A 201 NA NA A 203 1555 8555 3.19 LINK NA NA A 203 O HOH A 310 1555 1555 2.97 LINK NA NA A 203 O HOH A 324 1555 11455 2.45 LINK NA NA A 203 O HOH B 333 1555 1555 2.84 LINK NA NA A 204 O HOH A 323 1555 1555 2.99 LINK NA NA A 204 O HOH A 323 1555 8555 2.99 CISPEP 1 ASP A 145 PRO A 146 0 7.91 CISPEP 2 ASP B 145 PRO B 146 0 3.79 SITE 1 AC1 16 PRO A 115 ALA A 118 SER A 119 ASP A 122 SITE 2 AC1 16 THR A 132 ILE A 133 ALA A 134 GLY A 135 SITE 3 AC1 16 ASP A 136 ASP A 137 THR A 138 NA A 203 SITE 4 AC1 16 HOH A 308 HOH A 324 ASP B 136 TYR B 201 SITE 1 AC2 6 GLY A 82 THR A 83 ARG A 84 HOH A 304 SITE 2 AC2 6 HOH A 313 SER B 97 SITE 1 AC3 7 PRO A 111 ASP A 136 TYR A 201 HOH A 310 SITE 2 AC3 7 HOH A 324 TYR B 201 HOH B 333 SITE 1 AC4 2 ALA A 134 HOH A 323 SITE 1 AC5 15 ASP A 136 TYR A 201 NA A 203 PRO B 115 SITE 2 AC5 15 ALA B 118 SER B 119 ASP B 122 THR B 132 SITE 3 AC5 15 ILE B 133 ALA B 134 GLY B 135 ASP B 136 SITE 4 AC5 15 ASP B 137 THR B 138 HOH B 319 CRYST1 82.990 82.990 82.990 90.00 90.00 90.00 P 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012050 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012050 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012050 0.00000