HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 14-APR-20 6WJY TITLE HUMAN IDO1 IN COMPLEX WITH COMPOUND 4-A COMPND MOL_ID: 1; COMPND 2 MOLECULE: INDOLEAMINE 2,3-DIOXYGENASE 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: N-TERMINAL TRUNCATED; COMPND 5 SYNONYM: IDO-1,INDOLEAMINE-PYRROLE 2,3-DIOXYGENASE; COMPND 6 EC: 1.13.11.52; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IDO1, IDO, INDO; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INDOLEAMINE DIOXYGENASE, HEME, INHIBITOR, OXIDOREDUCTASE, KEYWDS 2 OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.A.LESBURG,A.LAMMENS,L.NEUMANN REVDAT 3 03-APR-24 6WJY 1 REMARK REVDAT 2 09-SEP-20 6WJY 1 JRNL REVDAT 1 26-AUG-20 6WJY 0 JRNL AUTH Q.PU,H.ZHANG,L.GUO,M.CHENG,A.C.DOTY,H.FERGUSON,X.FRADERA, JRNL AUTH 2 C.A.LESBURG,M.A.MCGOWAN,J.R.MILLER,P.GEDA,X.SONG,K.OTTE, JRNL AUTH 3 N.SCIAMMETTA,N.SOLBAN,W.YU,D.L.SLOMAN,H.ZHOU,A.LAMMENS, JRNL AUTH 4 L.NEUMANN,D.J.BENNETT,A.PASTERNAK,Y.HAN JRNL TITL DISCOVERY OF POTENT AND ORALLY AVAILABLE JRNL TITL 2 BICYCLO[1.1.1]PENTANE-DERIVED INDOLEAMINE-2,3-DIOXYGENASE 1 JRNL TITL 3 (IDO1) INHIBITORS. JRNL REF ACS MED.CHEM.LETT. V. 11 1548 2020 JRNL REFN ISSN 1948-5875 JRNL PMID 32832022 JRNL DOI 10.1021/ACSMEDCHEMLETT.0C00195 REMARK 2 REMARK 2 RESOLUTION. 1.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 73640 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2093 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.91 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.96 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5478 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.14 REMARK 3 BIN R VALUE (WORKING SET) : 0.2930 REMARK 3 BIN FREE R VALUE SET COUNT : 154 REMARK 3 BIN FREE R VALUE : 0.3410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5946 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 492 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.75000 REMARK 3 B22 (A**2) : 0.16000 REMARK 3 B33 (A**2) : 0.59000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.131 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.122 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.106 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.101 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6310 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 5739 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8597 ; 1.195 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13355 ; 0.946 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 799 ; 5.323 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 274 ;36.414 ;24.234 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1074 ;11.978 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;11.215 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 942 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7125 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1289 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1324 ; 0.189 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5633 ; 0.141 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3121 ; 0.161 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 3163 ; 0.077 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 426 ; 0.097 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 21 ; 0.131 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 63 ; 0.189 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.122 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 10 A 107 REMARK 3 ORIGIN FOR THE GROUP (A): 41.831 42.824 17.880 REMARK 3 T TENSOR REMARK 3 T11: 0.0335 T22: 0.3678 REMARK 3 T33: 0.3318 T12: -0.0426 REMARK 3 T13: 0.0100 T23: -0.0658 REMARK 3 L TENSOR REMARK 3 L11: 3.1077 L22: 2.4711 REMARK 3 L33: 2.7422 L12: -0.6340 REMARK 3 L13: -1.4263 L23: 0.9309 REMARK 3 S TENSOR REMARK 3 S11: -0.0837 S12: 0.2806 S13: -0.4032 REMARK 3 S21: 0.0209 S22: -0.2635 S23: 0.5347 REMARK 3 S31: 0.2664 S32: -0.7035 S33: 0.3472 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 108 A 335 REMARK 3 ORIGIN FOR THE GROUP (A): 61.160 44.116 12.711 REMARK 3 T TENSOR REMARK 3 T11: 0.0160 T22: 0.1225 REMARK 3 T33: 0.1438 T12: 0.0102 REMARK 3 T13: -0.0039 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 2.6907 L22: 1.4912 REMARK 3 L33: 2.2637 L12: -0.4437 REMARK 3 L13: -1.2998 L23: 0.6717 REMARK 3 S TENSOR REMARK 3 S11: -0.0751 S12: 0.0559 S13: -0.1807 REMARK 3 S21: -0.0150 S22: -0.1101 S23: 0.0478 REMARK 3 S31: 0.1436 S32: -0.1286 S33: 0.1852 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 336 A 401 REMARK 3 ORIGIN FOR THE GROUP (A): 71.103 53.365 20.380 REMARK 3 T TENSOR REMARK 3 T11: 0.0130 T22: 0.1348 REMARK 3 T33: 0.1574 T12: -0.0107 REMARK 3 T13: -0.0294 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 3.2979 L22: 4.7549 REMARK 3 L33: 3.4349 L12: -1.9501 REMARK 3 L13: -0.4942 L23: 1.9269 REMARK 3 S TENSOR REMARK 3 S11: -0.0175 S12: -0.3959 S13: 0.2111 REMARK 3 S21: 0.1429 S22: 0.1381 S23: -0.1969 REMARK 3 S31: -0.0199 S32: 0.2928 S33: -0.1206 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 11 B 107 REMARK 3 ORIGIN FOR THE GROUP (A): 91.045 21.970 26.039 REMARK 3 T TENSOR REMARK 3 T11: 0.0273 T22: 0.1814 REMARK 3 T33: 0.2232 T12: -0.0454 REMARK 3 T13: -0.0192 T23: 0.0893 REMARK 3 L TENSOR REMARK 3 L11: 3.6303 L22: 1.8602 REMARK 3 L33: 1.4075 L12: 0.5480 REMARK 3 L13: 0.8559 L23: 0.2097 REMARK 3 S TENSOR REMARK 3 S11: -0.1849 S12: 0.4130 S13: 0.0829 REMARK 3 S21: -0.1307 S22: 0.0528 S23: -0.2638 REMARK 3 S31: -0.1488 S32: 0.4039 S33: 0.1320 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 108 B 335 REMARK 3 ORIGIN FOR THE GROUP (A): 71.757 16.180 22.746 REMARK 3 T TENSOR REMARK 3 T11: 0.0127 T22: 0.1040 REMARK 3 T33: 0.1474 T12: -0.0198 REMARK 3 T13: -0.0153 T23: 0.0454 REMARK 3 L TENSOR REMARK 3 L11: 2.6422 L22: 1.0779 REMARK 3 L33: 1.5851 L12: 0.8557 REMARK 3 L13: 1.2192 L23: 0.2634 REMARK 3 S TENSOR REMARK 3 S11: -0.1705 S12: 0.1550 S13: 0.0826 REMARK 3 S21: -0.0716 S22: 0.0208 S23: 0.0425 REMARK 3 S31: -0.0875 S32: 0.0700 S33: 0.1496 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 336 B 403 REMARK 3 ORIGIN FOR THE GROUP (A): 62.200 12.380 34.809 REMARK 3 T TENSOR REMARK 3 T11: 0.0816 T22: 0.1680 REMARK 3 T33: 0.1697 T12: -0.0312 REMARK 3 T13: 0.0310 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 5.2005 L22: 1.7620 REMARK 3 L33: 4.1716 L12: -1.3882 REMARK 3 L13: 2.9835 L23: -1.1212 REMARK 3 S TENSOR REMARK 3 S11: -0.1320 S12: -0.6814 S13: 0.0982 REMARK 3 S21: 0.3562 S22: -0.0189 S23: 0.0546 REMARK 3 S31: -0.1849 S32: -0.4740 S33: 0.1509 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 6WJY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000248463. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 100.000 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75740 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.910 REMARK 200 RESOLUTION RANGE LOW (A) : 74.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03800 REMARK 200 FOR THE DATA SET : 17.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.91 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.42700 REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PREVIOUSLY SOLVED COMPLEX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 MM TRIS, 16% (W/V) PEG4000, 0.2 M REMARK 280 NH4OAC, PH 7.5, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.56400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.31450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.71650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.31450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.56400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.71650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 363 REMARK 465 GLU A 364 REMARK 465 ASN A 365 REMARK 465 LYS A 366 REMARK 465 THR A 367 REMARK 465 SER A 368 REMARK 465 GLU A 369 REMARK 465 ASP A 370 REMARK 465 PRO A 371 REMARK 465 SER A 372 REMARK 465 LYS A 373 REMARK 465 LEU A 374 REMARK 465 GLU A 375 REMARK 465 ALA A 376 REMARK 465 LYS A 377 REMARK 465 GLY A 378 REMARK 465 THR A 379 REMARK 465 GLU A 402 REMARK 465 GLY A 403 REMARK 465 MET B 10 REMARK 465 PRO B 362 REMARK 465 LYS B 363 REMARK 465 GLU B 364 REMARK 465 ASN B 365 REMARK 465 LYS B 366 REMARK 465 THR B 367 REMARK 465 SER B 368 REMARK 465 GLU B 369 REMARK 465 ASP B 370 REMARK 465 PRO B 371 REMARK 465 SER B 372 REMARK 465 LYS B 373 REMARK 465 LEU B 374 REMARK 465 GLU B 375 REMARK 465 ALA B 376 REMARK 465 LYS B 377 REMARK 465 GLY B 378 REMARK 465 THR B 379 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 MET A 10 CG SD CE REMARK 480 LYS A 13 CE NZ REMARK 480 LYS A 44 CE NZ REMARK 480 LYS A 101 NZ REMARK 480 LYS A 116 NZ REMARK 480 LYS A 117 NZ REMARK 480 LYS A 135 CE NZ REMARK 480 GLU A 146 CD OE1 OE2 REMARK 480 LYS A 186 CD CE NZ REMARK 480 LYS A 209 CE NZ REMARK 480 LYS A 224 CE NZ REMARK 480 GLU A 254 CG CD OE1 OE2 REMARK 480 GLU A 318 CD OE1 OE2 REMARK 480 LYS A 337 NZ REMARK 480 GLN A 361 CD OE1 NE2 REMARK 480 LYS A 397 NZ REMARK 480 LYS A 401 NZ REMARK 480 ILE B 11 CD1 REMARK 480 LYS B 13 CE NZ REMARK 480 GLU B 14 CD OE1 OE2 REMARK 480 LYS B 44 CE NZ REMARK 480 GLU B 57 CD OE1 OE2 REMARK 480 LYS B 61 CE NZ REMARK 480 LYS B 116 CE NZ REMARK 480 LYS B 117 NZ REMARK 480 LYS B 186 NZ REMARK 480 LYS B 198 NZ REMARK 480 LYS B 209 CE NZ REMARK 480 LYS B 224 NZ REMARK 480 LYS B 401 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 308 CB CYS B 308 SG -0.245 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 27 67.51 38.81 REMARK 500 ASN A 27 67.91 37.30 REMARK 500 VAL A 130 -61.00 -108.68 REMARK 500 ASN A 133 57.97 -109.15 REMARK 500 VAL A 229 -69.12 -124.26 REMARK 500 ILE A 354 -55.53 -125.71 REMARK 500 ILE A 354 -54.11 -125.71 REMARK 500 ASN B 27 67.13 30.92 REMARK 500 ASN B 133 57.72 -104.13 REMARK 500 VAL B 229 -70.05 -120.53 REMARK 500 ILE B 354 -59.30 -130.25 REMARK 500 GLN B 360 52.19 -95.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 861 DISTANCE = 5.99 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue U41 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue U41 B 501 DBREF 6WJY A 11 403 UNP P14902 I23O1_HUMAN 11 403 DBREF 6WJY B 11 403 UNP P14902 I23O1_HUMAN 11 403 SEQADV 6WJY MET A 10 UNP P14902 INITIATING METHIONINE SEQADV 6WJY MET B 10 UNP P14902 INITIATING METHIONINE SEQRES 1 A 394 MET ILE SER LYS GLU TYR HIS ILE ASP GLU GLU VAL GLY SEQRES 2 A 394 PHE ALA LEU PRO ASN PRO GLN GLU ASN LEU PRO ASP PHE SEQRES 3 A 394 TYR ASN ASP TRP MET PHE ILE ALA LYS HIS LEU PRO ASP SEQRES 4 A 394 LEU ILE GLU SER GLY GLN LEU ARG GLU ARG VAL GLU LYS SEQRES 5 A 394 LEU ASN MET LEU SER ILE ASP HIS LEU THR ASP HIS LYS SEQRES 6 A 394 SER GLN ARG LEU ALA ARG LEU VAL LEU GLY CYS ILE THR SEQRES 7 A 394 MET ALA TYR VAL TRP GLY LYS GLY HIS GLY ASP VAL ARG SEQRES 8 A 394 LYS VAL LEU PRO ARG ASN ILE ALA VAL PRO TYR CYS GLN SEQRES 9 A 394 LEU SER LYS LYS LEU GLU LEU PRO PRO ILE LEU VAL TYR SEQRES 10 A 394 ALA ASP CYS VAL LEU ALA ASN TRP LYS LYS LYS ASP PRO SEQRES 11 A 394 ASN LYS PRO LEU THR TYR GLU ASN MET ASP VAL LEU PHE SEQRES 12 A 394 SER PHE ARG ASP GLY ASP CYS SER LYS GLY PHE PHE LEU SEQRES 13 A 394 VAL SER LEU LEU VAL GLU ILE ALA ALA ALA SER ALA ILE SEQRES 14 A 394 LYS VAL ILE PRO THR VAL PHE LYS ALA MET GLN MET GLN SEQRES 15 A 394 GLU ARG ASP THR LEU LEU LYS ALA LEU LEU GLU ILE ALA SEQRES 16 A 394 SER CYS LEU GLU LYS ALA LEU GLN VAL PHE HIS GLN ILE SEQRES 17 A 394 HIS ASP HIS VAL ASN PRO LYS ALA PHE PHE SER VAL LEU SEQRES 18 A 394 ARG ILE TYR LEU SER GLY TRP LYS GLY ASN PRO GLN LEU SEQRES 19 A 394 SER ASP GLY LEU VAL TYR GLU GLY PHE TRP GLU ASP PRO SEQRES 20 A 394 LYS GLU PHE ALA GLY GLY SER ALA GLY GLN SER SER VAL SEQRES 21 A 394 PHE GLN CYS PHE ASP VAL LEU LEU GLY ILE GLN GLN THR SEQRES 22 A 394 ALA GLY GLY GLY HIS ALA ALA GLN PHE LEU GLN ASP MET SEQRES 23 A 394 ARG ARG TYR MET PRO PRO ALA HIS ARG ASN PHE LEU CYS SEQRES 24 A 394 SER LEU GLU SER ASN PRO SER VAL ARG GLU PHE VAL LEU SEQRES 25 A 394 SER LYS GLY ASP ALA GLY LEU ARG GLU ALA TYR ASP ALA SEQRES 26 A 394 CYS VAL LYS ALA LEU VAL SER LEU ARG SER TYR HIS LEU SEQRES 27 A 394 GLN ILE VAL THR LYS TYR ILE LEU ILE PRO ALA SER GLN SEQRES 28 A 394 GLN PRO LYS GLU ASN LYS THR SER GLU ASP PRO SER LYS SEQRES 29 A 394 LEU GLU ALA LYS GLY THR GLY GLY THR ASP LEU MET ASN SEQRES 30 A 394 PHE LEU LYS THR VAL ARG SER THR THR GLU LYS SER LEU SEQRES 31 A 394 LEU LYS GLU GLY SEQRES 1 B 394 MET ILE SER LYS GLU TYR HIS ILE ASP GLU GLU VAL GLY SEQRES 2 B 394 PHE ALA LEU PRO ASN PRO GLN GLU ASN LEU PRO ASP PHE SEQRES 3 B 394 TYR ASN ASP TRP MET PHE ILE ALA LYS HIS LEU PRO ASP SEQRES 4 B 394 LEU ILE GLU SER GLY GLN LEU ARG GLU ARG VAL GLU LYS SEQRES 5 B 394 LEU ASN MET LEU SER ILE ASP HIS LEU THR ASP HIS LYS SEQRES 6 B 394 SER GLN ARG LEU ALA ARG LEU VAL LEU GLY CYS ILE THR SEQRES 7 B 394 MET ALA TYR VAL TRP GLY LYS GLY HIS GLY ASP VAL ARG SEQRES 8 B 394 LYS VAL LEU PRO ARG ASN ILE ALA VAL PRO TYR CYS GLN SEQRES 9 B 394 LEU SER LYS LYS LEU GLU LEU PRO PRO ILE LEU VAL TYR SEQRES 10 B 394 ALA ASP CYS VAL LEU ALA ASN TRP LYS LYS LYS ASP PRO SEQRES 11 B 394 ASN LYS PRO LEU THR TYR GLU ASN MET ASP VAL LEU PHE SEQRES 12 B 394 SER PHE ARG ASP GLY ASP CYS SER LYS GLY PHE PHE LEU SEQRES 13 B 394 VAL SER LEU LEU VAL GLU ILE ALA ALA ALA SER ALA ILE SEQRES 14 B 394 LYS VAL ILE PRO THR VAL PHE LYS ALA MET GLN MET GLN SEQRES 15 B 394 GLU ARG ASP THR LEU LEU LYS ALA LEU LEU GLU ILE ALA SEQRES 16 B 394 SER CYS LEU GLU LYS ALA LEU GLN VAL PHE HIS GLN ILE SEQRES 17 B 394 HIS ASP HIS VAL ASN PRO LYS ALA PHE PHE SER VAL LEU SEQRES 18 B 394 ARG ILE TYR LEU SER GLY TRP LYS GLY ASN PRO GLN LEU SEQRES 19 B 394 SER ASP GLY LEU VAL TYR GLU GLY PHE TRP GLU ASP PRO SEQRES 20 B 394 LYS GLU PHE ALA GLY GLY SER ALA GLY GLN SER SER VAL SEQRES 21 B 394 PHE GLN CYS PHE ASP VAL LEU LEU GLY ILE GLN GLN THR SEQRES 22 B 394 ALA GLY GLY GLY HIS ALA ALA GLN PHE LEU GLN ASP MET SEQRES 23 B 394 ARG ARG TYR MET PRO PRO ALA HIS ARG ASN PHE LEU CYS SEQRES 24 B 394 SER LEU GLU SER ASN PRO SER VAL ARG GLU PHE VAL LEU SEQRES 25 B 394 SER LYS GLY ASP ALA GLY LEU ARG GLU ALA TYR ASP ALA SEQRES 26 B 394 CYS VAL LYS ALA LEU VAL SER LEU ARG SER TYR HIS LEU SEQRES 27 B 394 GLN ILE VAL THR LYS TYR ILE LEU ILE PRO ALA SER GLN SEQRES 28 B 394 GLN PRO LYS GLU ASN LYS THR SER GLU ASP PRO SER LYS SEQRES 29 B 394 LEU GLU ALA LYS GLY THR GLY GLY THR ASP LEU MET ASN SEQRES 30 B 394 PHE LEU LYS THR VAL ARG SER THR THR GLU LYS SER LEU SEQRES 31 B 394 LEU LYS GLU GLY HET U41 A 501 27 HET U41 B 501 27 HETNAM U41 3-CHLORO-N-(3-{(2S)-1-[(4-FLUOROPHENYL)AMINO]-1- HETNAM 2 U41 OXOPROPAN-2-YL}BICYCLO[1.1.1]PENTAN-1-YL)BENZAMIDE FORMUL 3 U41 2(C21 H20 CL F N2 O2) FORMUL 5 HOH *492(H2 O) HELIX 1 AA1 SER A 12 HIS A 16 5 5 HELIX 2 AA2 PRO A 33 PHE A 35 5 3 HELIX 3 AA3 TYR A 36 HIS A 45 1 10 HELIX 4 AA4 HIS A 45 SER A 52 1 8 HELIX 5 AA5 GLN A 54 LYS A 61 1 8 HELIX 6 AA6 SER A 66 LEU A 70 5 5 HELIX 7 AA7 ASP A 72 GLY A 93 1 22 HELIX 8 AA8 PRO A 104 GLU A 119 1 16 HELIX 9 AA9 VAL A 125 VAL A 130 1 6 HELIX 10 AB1 THR A 144 GLU A 146 5 3 HELIX 11 AB2 CYS A 159 LYS A 179 1 21 HELIX 12 AB3 VAL A 180 MET A 190 1 11 HELIX 13 AB4 GLU A 192 HIS A 215 1 24 HELIX 14 AB5 GLN A 216 VAL A 221 1 6 HELIX 15 AB6 ASN A 222 VAL A 229 1 8 HELIX 16 AB7 VAL A 229 SER A 235 1 7 HELIX 17 AB8 ASN A 240 SER A 244 5 5 HELIX 18 AB9 SER A 263 SER A 267 5 5 HELIX 19 AC1 SER A 268 LEU A 277 1 10 HELIX 20 AC2 GLY A 286 ARG A 297 1 12 HELIX 21 AC3 PRO A 300 ASN A 313 1 14 HELIX 22 AC4 SER A 315 LYS A 323 1 9 HELIX 23 AC5 ASP A 325 ILE A 354 1 30 HELIX 24 AC6 ILE A 354 GLN A 361 1 8 HELIX 25 AC7 GLY A 381 LYS A 397 1 17 HELIX 26 AC8 SER B 12 HIS B 16 5 5 HELIX 27 AC9 PRO B 33 PHE B 35 5 3 HELIX 28 AD1 TYR B 36 HIS B 45 1 10 HELIX 29 AD2 HIS B 45 SER B 52 1 8 HELIX 30 AD3 GLN B 54 LEU B 62 1 9 HELIX 31 AD4 SER B 66 LEU B 70 5 5 HELIX 32 AD5 ASP B 72 GLY B 93 1 22 HELIX 33 AD6 PRO B 104 GLU B 119 1 16 HELIX 34 AD7 VAL B 125 VAL B 130 1 6 HELIX 35 AD8 THR B 144 GLU B 146 5 3 HELIX 36 AD9 CYS B 159 LYS B 179 1 21 HELIX 37 AE1 VAL B 180 MET B 190 1 11 HELIX 38 AE2 GLU B 192 HIS B 215 1 24 HELIX 39 AE3 GLN B 216 VAL B 221 1 6 HELIX 40 AE4 ASN B 222 VAL B 229 1 8 HELIX 41 AE5 VAL B 229 SER B 235 1 7 HELIX 42 AE6 ASN B 240 SER B 244 5 5 HELIX 43 AE7 SER B 263 GLN B 266 5 4 HELIX 44 AE8 SER B 267 LEU B 277 1 11 HELIX 45 AE9 GLY B 286 ARG B 296 1 11 HELIX 46 AF1 ARG B 297 MET B 299 5 3 HELIX 47 AF2 PRO B 300 ASN B 313 1 14 HELIX 48 AF3 SER B 315 LYS B 323 1 9 HELIX 49 AF4 ASP B 325 ILE B 354 1 30 HELIX 50 AF5 ILE B 354 GLN B 360 1 7 HELIX 51 AF6 GLY B 381 LYS B 397 1 17 SHEET 1 AA1 2 VAL A 102 LEU A 103 0 SHEET 2 AA1 2 VAL A 248 TYR A 249 1 O VAL A 248 N LEU A 103 SHEET 1 AA2 2 LYS A 135 LYS A 136 0 SHEET 2 AA2 2 MET A 148 ASP A 149 -1 O ASP A 149 N LYS A 135 SHEET 1 AA3 2 VAL B 102 LEU B 103 0 SHEET 2 AA3 2 VAL B 248 TYR B 249 1 O VAL B 248 N LEU B 103 SHEET 1 AA4 2 LYS B 135 LYS B 136 0 SHEET 2 AA4 2 MET B 148 ASP B 149 -1 O ASP B 149 N LYS B 135 SSBOND 1 CYS A 308 CYS B 308 1555 1555 2.03 SITE 1 AC1 13 TYR A 126 CYS A 129 VAL A 130 PHE A 163 SITE 2 AC1 13 SER A 167 ALA A 174 GLY A 262 SER A 263 SITE 3 AC1 13 ALA A 264 VAL A 269 ARG A 343 HOH A 670 SITE 4 AC1 13 HOH A 726 SITE 1 AC2 12 TYR B 126 VAL B 130 PHE B 163 SER B 167 SITE 2 AC2 12 ALA B 174 GLY B 262 SER B 263 ALA B 264 SITE 3 AC2 12 VAL B 269 ARG B 343 HOH B 698 HOH B 699 CRYST1 85.128 91.433 128.629 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011747 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010937 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007774 0.00000