HEADER TRANSCRIPTION 18-APR-20 6WL5 TITLE CRYSTAL STRUCTURE OF ECMRR C-TERMINAL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ECMRR TRANSCRIPTIONAL REGULATOR; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSCRIPTIONAL FACTOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.YANG,C.LIU,B.LIU REVDAT 4 06-MAR-24 6WL5 1 REMARK REVDAT 3 26-MAY-21 6WL5 1 JRNL REVDAT 2 21-APR-21 6WL5 1 JRNL REVDAT 1 07-APR-21 6WL5 0 JRNL AUTH Y.YANG,C.LIU,W.ZHOU,W.SHI,M.CHEN,B.ZHANG,D.G.SCHATZ,Y.HU, JRNL AUTH 2 B.LIU JRNL TITL STRUCTURAL VISUALIZATION OF TRANSCRIPTION ACTIVATED BY A JRNL TITL 2 MULTIDRUG-SENSING MERR FAMILY REGULATOR. JRNL REF NAT COMMUN V. 12 2702 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 33976201 JRNL DOI 10.1038/S41467-021-22990-8 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 102.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 178280 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.144 REMARK 3 R VALUE (WORKING SET) : 0.142 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 8912 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1102.9300 - 4.3500 0.98 5920 312 0.1815 0.1860 REMARK 3 2 4.3500 - 3.4500 0.95 5580 293 0.1373 0.1646 REMARK 3 3 3.4500 - 3.0200 0.99 5723 302 0.1426 0.1589 REMARK 3 4 3.0200 - 2.7400 0.99 5797 305 0.1393 0.1513 REMARK 3 5 2.7400 - 2.5400 0.99 5716 301 0.1356 0.1669 REMARK 3 6 2.5400 - 2.3900 1.00 5754 303 0.1377 0.1689 REMARK 3 7 2.3900 - 2.2700 0.96 5535 291 0.1199 0.1522 REMARK 3 8 2.2700 - 2.1800 0.95 5437 286 0.1216 0.1600 REMARK 3 9 2.1800 - 2.0900 0.98 5624 296 0.1241 0.1536 REMARK 3 10 2.0900 - 2.0200 0.97 5563 293 0.1302 0.1630 REMARK 3 11 2.0200 - 1.9600 0.98 5690 300 0.1256 0.1709 REMARK 3 12 1.9600 - 1.9000 0.98 5579 294 0.1255 0.1570 REMARK 3 13 1.9000 - 1.8500 0.99 5693 299 0.1238 0.1721 REMARK 3 14 1.8500 - 1.8000 0.99 5684 300 0.1224 0.1542 REMARK 3 15 1.8000 - 1.7600 0.99 5647 297 0.1217 0.1768 REMARK 3 16 1.7600 - 1.7300 1.00 5739 302 0.1205 0.1719 REMARK 3 17 1.7300 - 1.6900 0.99 5644 297 0.1170 0.1619 REMARK 3 18 1.6900 - 1.6600 0.99 5715 301 0.1230 0.1662 REMARK 3 19 1.6600 - 1.6300 0.96 5392 283 0.1333 0.1840 REMARK 3 20 1.6300 - 1.6000 0.98 5677 298 0.1326 0.1810 REMARK 3 21 1.6000 - 1.5800 0.98 5539 291 0.1413 0.1868 REMARK 3 22 1.5800 - 1.5500 0.99 5661 298 0.1587 0.2225 REMARK 3 23 1.5500 - 1.5300 0.98 5575 294 0.1701 0.2291 REMARK 3 24 1.5300 - 1.5100 0.98 5594 294 0.1823 0.2188 REMARK 3 25 1.5100 - 1.4900 0.99 5663 299 0.1724 0.2276 REMARK 3 26 1.4900 - 1.4700 0.99 5563 292 0.1880 0.2380 REMARK 3 27 1.4700 - 1.4500 0.99 5711 300 0.1908 0.2393 REMARK 3 28 1.4500 - 1.4300 0.99 5690 299 0.2056 0.2610 REMARK 3 29 1.4300 - 1.4200 0.99 5556 292 0.2144 0.2687 REMARK 3 30 1.4200 - 1.4000 0.99 5707 300 0.2253 0.2804 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.135 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.859 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.09 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 5880 REMARK 3 ANGLE : 1.468 7966 REMARK 3 CHIRALITY : 0.096 829 REMARK 3 PLANARITY : 0.009 1011 REMARK 3 DIHEDRAL : 20.014 2301 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WL5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000248547. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97920 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 178379 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 103.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.60100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIRAS REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5 M SODIUM CHLORIDE, 0.01 M REMARK 280 MAGNESIUM CHLORIDE, 0.01 M CETYLTRIMETHYLAMMONIUM BROMIDE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 106.19650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.20950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 106.19650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.20950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 111 REMARK 465 SER B 111 REMARK 465 SER C 111 REMARK 465 SER D 111 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 251 -7.86 -140.30 REMARK 500 ILE C 246 -68.70 -108.84 REMARK 500 ILE D 246 -70.33 -108.64 REMARK 500 ASN D 251 -8.90 -140.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 610 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH A 611 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH A 612 DISTANCE = 6.47 ANGSTROMS REMARK 525 HOH A 613 DISTANCE = 7.37 ANGSTROMS REMARK 525 HOH C 659 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH C 660 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH D 670 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH D 671 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH D 672 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH D 673 DISTANCE = 6.14 ANGSTROMS REMARK 525 HOH D 674 DISTANCE = 6.47 ANGSTROMS REMARK 525 HOH D 675 DISTANCE = 6.52 ANGSTROMS REMARK 525 HOH D 676 DISTANCE = 9.33 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 16A A 303 REMARK 610 16A C 303 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 16A A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 16A A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 16A A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 16A B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 16A B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 16A C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 16A C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 16A C 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 16A D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 16A D 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 306 DBREF 6WL5 A 111 269 PDB 6WL5 6WL5 111 269 DBREF 6WL5 B 111 269 PDB 6WL5 6WL5 111 269 DBREF 6WL5 C 111 269 PDB 6WL5 6WL5 111 269 DBREF 6WL5 D 111 269 PDB 6WL5 6WL5 111 269 SEQRES 1 A 159 SER MET LEU TYR GLN ALA ALA LEU LYS GLU ILE PRO GLU SEQRES 2 A 159 CYS ILE VAL TYR SER LYS ARG PHE ILE VAL PRO ASP PHE SEQRES 3 A 159 SER SER TYR ILE LYS LEU ILE PRO PRO ILE GLY GLN GLU SEQRES 4 A 159 VAL MET LYS ALA ASN PRO GLY LEU THR LEU THR THR PRO SEQRES 5 A 159 ALA TYR CYS PHE THR LEU TYR HIS ASP LYS GLU TYR LYS SEQRES 6 A 159 GLU LYS ASN MET ASP VAL GLU PHE CYS GLU ALA VAL ASN SEQRES 7 A 159 ASP PHE GLY LYS ASN GLU GLY ASN ILE ILE PHE GLN VAL SEQRES 8 A 159 ILE PRO ALA ILE THR ALA VAL THR VAL ILE HIS LYS GLY SEQRES 9 A 159 PRO TYR ASP SER LEU ARG ASN ALA TYR ILE TYR LEU MET SEQRES 10 A 159 GLN TRP VAL GLU ASP ASN GLY TYR LEU LEU THR ASN SER SEQRES 11 A 159 PRO ARG GLU SER TYR ILE ASP GLY ILE TRP ASN LYS GLN SEQRES 12 A 159 ASP SER ALA GLU TRP MET THR GLU ILE GLN PHE PRO VAL SEQRES 13 A 159 GLU LYS VAL SEQRES 1 B 159 SER MET LEU TYR GLN ALA ALA LEU LYS GLU ILE PRO GLU SEQRES 2 B 159 CYS ILE VAL TYR SER LYS ARG PHE ILE VAL PRO ASP PHE SEQRES 3 B 159 SER SER TYR ILE LYS LEU ILE PRO PRO ILE GLY GLN GLU SEQRES 4 B 159 VAL MET LYS ALA ASN PRO GLY LEU THR LEU THR THR PRO SEQRES 5 B 159 ALA TYR CYS PHE THR LEU TYR HIS ASP LYS GLU TYR LYS SEQRES 6 B 159 GLU LYS ASN MET ASP VAL GLU PHE CYS GLU ALA VAL ASN SEQRES 7 B 159 ASP PHE GLY LYS ASN GLU GLY ASN ILE ILE PHE GLN VAL SEQRES 8 B 159 ILE PRO ALA ILE THR ALA VAL THR VAL ILE HIS LYS GLY SEQRES 9 B 159 PRO TYR ASP SER LEU ARG ASN ALA TYR ILE TYR LEU MET SEQRES 10 B 159 GLN TRP VAL GLU ASP ASN GLY TYR LEU LEU THR ASN SER SEQRES 11 B 159 PRO ARG GLU SER TYR ILE ASP GLY ILE TRP ASN LYS GLN SEQRES 12 B 159 ASP SER ALA GLU TRP MET THR GLU ILE GLN PHE PRO VAL SEQRES 13 B 159 GLU LYS VAL SEQRES 1 C 159 SER MET LEU TYR GLN ALA ALA LEU LYS GLU ILE PRO GLU SEQRES 2 C 159 CYS ILE VAL TYR SER LYS ARG PHE ILE VAL PRO ASP PHE SEQRES 3 C 159 SER SER TYR ILE LYS LEU ILE PRO PRO ILE GLY GLN GLU SEQRES 4 C 159 VAL MET LYS ALA ASN PRO GLY LEU THR LEU THR THR PRO SEQRES 5 C 159 ALA TYR CYS PHE THR LEU TYR HIS ASP LYS GLU TYR LYS SEQRES 6 C 159 GLU LYS ASN MET ASP VAL GLU PHE CYS GLU ALA VAL ASN SEQRES 7 C 159 ASP PHE GLY LYS ASN GLU GLY ASN ILE ILE PHE GLN VAL SEQRES 8 C 159 ILE PRO ALA ILE THR ALA VAL THR VAL ILE HIS LYS GLY SEQRES 9 C 159 PRO TYR ASP SER LEU ARG ASN ALA TYR ILE TYR LEU MET SEQRES 10 C 159 GLN TRP VAL GLU ASP ASN GLY TYR LEU LEU THR ASN SER SEQRES 11 C 159 PRO ARG GLU SER TYR ILE ASP GLY ILE TRP ASN LYS GLN SEQRES 12 C 159 ASP SER ALA GLU TRP MET THR GLU ILE GLN PHE PRO VAL SEQRES 13 C 159 GLU LYS VAL SEQRES 1 D 159 SER MET LEU TYR GLN ALA ALA LEU LYS GLU ILE PRO GLU SEQRES 2 D 159 CYS ILE VAL TYR SER LYS ARG PHE ILE VAL PRO ASP PHE SEQRES 3 D 159 SER SER TYR ILE LYS LEU ILE PRO PRO ILE GLY GLN GLU SEQRES 4 D 159 VAL MET LYS ALA ASN PRO GLY LEU THR LEU THR THR PRO SEQRES 5 D 159 ALA TYR CYS PHE THR LEU TYR HIS ASP LYS GLU TYR LYS SEQRES 6 D 159 GLU LYS ASN MET ASP VAL GLU PHE CYS GLU ALA VAL ASN SEQRES 7 D 159 ASP PHE GLY LYS ASN GLU GLY ASN ILE ILE PHE GLN VAL SEQRES 8 D 159 ILE PRO ALA ILE THR ALA VAL THR VAL ILE HIS LYS GLY SEQRES 9 D 159 PRO TYR ASP SER LEU ARG ASN ALA TYR ILE TYR LEU MET SEQRES 10 D 159 GLN TRP VAL GLU ASP ASN GLY TYR LEU LEU THR ASN SER SEQRES 11 D 159 PRO ARG GLU SER TYR ILE ASP GLY ILE TRP ASN LYS GLN SEQRES 12 D 159 ASP SER ALA GLU TRP MET THR GLU ILE GLN PHE PRO VAL SEQRES 13 D 159 GLU LYS VAL HET 16A A 301 62 HET 16A A 302 62 HET 16A A 303 34 HET GOL A 304 14 HET GOL A 305 14 HET CL A 306 1 HET EDO A 307 10 HET 16A B 301 62 HET 16A B 302 62 HET GOL B 303 14 HET EDO B 304 10 HET EDO B 305 10 HET EDO B 306 10 HET 16A C 301 61 HET 16A C 302 62 HET 16A C 303 37 HET GOL C 304 13 HET GOL C 305 14 HET GOL C 306 12 HET CL C 307 1 HET 16A D 301 62 HET 16A D 302 62 HET GOL D 303 14 HET GOL D 304 13 HET GOL D 305 14 HET EDO D 306 10 HETNAM 16A CETYL-TRIMETHYL-AMMONIUM HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 5 16A 10(C19 H42 N 1+) FORMUL 8 GOL 9(C3 H8 O3) FORMUL 10 CL 2(CL 1-) FORMUL 11 EDO 5(C2 H6 O2) FORMUL 31 HOH *969(H2 O) HELIX 1 AA1 ASP A 135 LEU A 142 1 8 HELIX 2 AA2 ILE A 143 ASN A 154 1 12 HELIX 3 AA3 PRO A 215 ASP A 217 5 3 HELIX 4 AA4 SER A 218 GLY A 234 1 17 HELIX 5 AA5 ASP A 254 GLU A 257 5 4 HELIX 6 AA6 ASP B 135 LYS B 141 1 7 HELIX 7 AA7 ILE B 143 ASN B 154 1 12 HELIX 8 AA8 PRO B 215 SER B 218 5 4 HELIX 9 AA9 LEU B 219 ASN B 233 1 15 HELIX 10 AB1 ASP B 254 GLU B 257 5 4 HELIX 11 AB2 ASP C 135 LEU C 142 1 8 HELIX 12 AB3 ILE C 143 ASN C 154 1 12 HELIX 13 AB4 PRO C 215 SER C 218 5 4 HELIX 14 AB5 LEU C 219 GLY C 234 1 16 HELIX 15 AB6 ASP C 254 GLU C 257 5 4 HELIX 16 AB7 ASP D 135 LEU D 142 1 8 HELIX 17 AB8 ILE D 143 ASN D 154 1 12 HELIX 18 AB9 PRO D 215 SER D 218 5 4 HELIX 19 AC1 LEU D 219 GLY D 234 1 16 HELIX 20 AC2 ASP D 254 GLU D 257 5 4 SHEET 1 AA1 8 ALA A 117 ILE A 121 0 SHEET 2 AA1 8 ILE A 205 LYS A 213 -1 O ALA A 207 N LYS A 119 SHEET 3 AA1 8 MET A 259 LYS A 268 -1 O THR A 260 N HIS A 212 SHEET 4 AA1 8 ARG A 242 ASP A 247 -1 N SER A 244 O GLU A 261 SHEET 5 AA1 8 CYS A 165 TYR A 169 -1 N CYS A 165 O TYR A 245 SHEET 6 AA1 8 MET A 179 VAL A 187 -1 O CYS A 184 N PHE A 166 SHEET 7 AA1 8 CYS A 124 VAL A 133 -1 N VAL A 133 O MET A 179 SHEET 8 AA1 8 ILE A 198 ILE A 202 -1 O ILE A 202 N CYS A 124 SHEET 1 AA2 4 ALA A 117 ILE A 121 0 SHEET 2 AA2 4 ILE A 205 LYS A 213 -1 O ALA A 207 N LYS A 119 SHEET 3 AA2 4 MET A 259 LYS A 268 -1 O THR A 260 N HIS A 212 SHEET 4 AA2 4 TYR A 235 LEU A 237 -1 N LEU A 236 O GLU A 267 SHEET 1 AA3 8 ALA B 117 ILE B 121 0 SHEET 2 AA3 8 ILE B 205 LYS B 213 -1 O ALA B 207 N LYS B 119 SHEET 3 AA3 8 MET B 259 LYS B 268 -1 O THR B 260 N HIS B 212 SHEET 4 AA3 8 ARG B 242 ASP B 247 -1 N SER B 244 O GLU B 261 SHEET 5 AA3 8 CYS B 165 TYR B 169 -1 N CYS B 165 O TYR B 245 SHEET 6 AA3 8 MET B 179 VAL B 187 -1 O CYS B 184 N PHE B 166 SHEET 7 AA3 8 CYS B 124 VAL B 133 -1 N PHE B 131 O VAL B 181 SHEET 8 AA3 8 ILE B 198 ILE B 202 -1 O GLN B 200 N VAL B 126 SHEET 1 AA4 4 ALA B 117 ILE B 121 0 SHEET 2 AA4 4 ILE B 205 LYS B 213 -1 O ALA B 207 N LYS B 119 SHEET 3 AA4 4 MET B 259 LYS B 268 -1 O THR B 260 N HIS B 212 SHEET 4 AA4 4 TYR B 235 LEU B 237 -1 N LEU B 236 O GLU B 267 SHEET 1 AA5 8 ALA C 117 ILE C 121 0 SHEET 2 AA5 8 ILE C 205 LYS C 213 -1 O ALA C 207 N LYS C 119 SHEET 3 AA5 8 MET C 259 LYS C 268 -1 O THR C 260 N HIS C 212 SHEET 4 AA5 8 ARG C 242 ASP C 247 -1 N SER C 244 O GLU C 261 SHEET 5 AA5 8 CYS C 165 TYR C 169 -1 N CYS C 165 O TYR C 245 SHEET 6 AA5 8 MET C 179 VAL C 187 -1 O CYS C 184 N PHE C 166 SHEET 7 AA5 8 CYS C 124 VAL C 133 -1 N PHE C 131 O VAL C 181 SHEET 8 AA5 8 ILE C 198 ILE C 202 -1 O ILE C 202 N CYS C 124 SHEET 1 AA6 4 ALA C 117 ILE C 121 0 SHEET 2 AA6 4 ILE C 205 LYS C 213 -1 O ALA C 207 N LYS C 119 SHEET 3 AA6 4 MET C 259 LYS C 268 -1 O THR C 260 N HIS C 212 SHEET 4 AA6 4 TYR C 235 LEU C 237 -1 N LEU C 236 O GLU C 267 SHEET 1 AA7 8 ALA D 117 ILE D 121 0 SHEET 2 AA7 8 ILE D 205 LYS D 213 -1 O ILE D 205 N ILE D 121 SHEET 3 AA7 8 MET D 259 LYS D 268 -1 O THR D 260 N HIS D 212 SHEET 4 AA7 8 ARG D 242 ASP D 247 -1 N ARG D 242 O GLN D 263 SHEET 5 AA7 8 CYS D 165 TYR D 169 -1 N CYS D 165 O TYR D 245 SHEET 6 AA7 8 MET D 179 VAL D 187 -1 O CYS D 184 N PHE D 166 SHEET 7 AA7 8 CYS D 124 VAL D 133 -1 N PHE D 131 O VAL D 181 SHEET 8 AA7 8 ILE D 198 ILE D 202 -1 O ILE D 202 N CYS D 124 SHEET 1 AA8 4 ALA D 117 ILE D 121 0 SHEET 2 AA8 4 ILE D 205 LYS D 213 -1 O ILE D 205 N ILE D 121 SHEET 3 AA8 4 MET D 259 LYS D 268 -1 O THR D 260 N HIS D 212 SHEET 4 AA8 4 TYR D 235 LEU D 237 -1 N LEU D 236 O GLU D 267 CISPEP 1 THR A 161 PRO A 162 0 -2.32 CISPEP 2 THR B 161 PRO B 162 0 -0.12 CISPEP 3 THR C 161 PRO C 162 0 3.01 CISPEP 4 THR D 161 PRO D 162 0 -1.46 SITE 1 AC1 10 TYR A 169 ASP A 171 GLU A 173 TYR A 174 SITE 2 AC1 10 LYS A 175 LEU A 219 TYR A 223 MET A 227 SITE 3 AC1 10 GLU A 243 GLN B 115 SITE 1 AC2 7 GLU A 185 TYR A 245 TRP A 250 16A A 303 SITE 2 AC2 7 HOH A 480 ILE D 143 TYR D 245 SITE 1 AC3 5 TRP A 250 ASN A 251 16A A 302 HOH A 438 SITE 2 AC3 5 LYS D 141 SITE 1 AC4 3 ARG A 130 HIS A 170 HOH A 407 SITE 1 AC5 7 LEU A 237 THR A 238 ASN A 239 PRO A 241 SITE 2 AC5 7 HOH A 401 HOH A 427 HOH A 430 SITE 1 AC6 2 LYS A 268 LYS B 177 SITE 1 AC7 4 THR A 206 VAL A 266 GLU A 267 LYS A 268 SITE 1 AC8 10 GLN A 115 TYR B 169 ASP B 171 GLU B 173 SITE 2 AC8 10 TYR B 174 LYS B 175 MET B 179 LEU B 219 SITE 3 AC8 10 TYR B 223 GLU B 243 SITE 1 AC9 5 GLU B 185 TRP B 250 ILE C 140 ILE C 143 SITE 2 AC9 5 TRP C 250 SITE 1 AD1 5 GLN A 115 ASN B 239 HOH B 412 HOH B 450 SITE 2 AD1 5 HOH B 507 SITE 1 AD2 4 SER B 218 ARG B 220 ASN B 221 HOH B 555 SITE 1 AD3 5 HIS B 170 ASN B 239 SER B 240 HOH B 408 SITE 2 AD3 5 HOH B 506 SITE 1 AD4 6 THR B 160 PRO B 162 TYR B 164 ALA B 186 SITE 2 AD4 6 HOH B 407 HOH B 449 SITE 1 AD5 12 GLN C 115 TYR C 169 ASP C 171 GLU C 173 SITE 2 AD5 12 TYR C 174 LYS C 175 TYR C 223 MET C 227 SITE 3 AD5 12 LEU C 237 GLU C 243 GOL C 306 HOH C 590 SITE 1 AD6 5 PRO B 144 CYS C 165 GLU C 185 TRP C 250 SITE 2 AD6 5 16A C 303 SITE 1 AD7 6 LYS B 141 TRP C 250 ASN C 251 16A C 302 SITE 2 AD7 6 HOH C 468 HOH C 637 SITE 1 AD8 5 ARG C 130 HIS C 170 LYS C 172 SER C 240 SITE 2 AD8 5 HOH C 412 SITE 1 AD9 5 LEU C 237 THR C 238 ASN C 239 HOH C 414 SITE 2 AD9 5 HOH C 439 SITE 1 AE1 12 ALA C 117 LEU C 118 TYR C 174 TYR C 223 SITE 2 AE1 12 ILE C 224 MET C 227 VAL C 230 GLU C 231 SITE 3 AE1 12 LEU C 237 16A C 301 HOH C 454 HOH C 480 SITE 1 AE2 1 SER C 137 SITE 1 AE3 10 TYR D 169 ASP D 171 GLU D 173 TYR D 174 SITE 2 AE3 10 LYS D 175 LEU D 219 TYR D 223 PRO D 241 SITE 3 AE3 10 GLU D 243 GOL D 304 SITE 1 AE4 5 TYR A 245 GLU D 185 TYR D 245 TRP D 250 SITE 2 AE4 5 HOH D 463 SITE 1 AE5 9 LEU D 168 HIS D 170 GLU D 182 GLN D 200 SITE 2 AE5 9 ASN D 239 SER D 240 HOH D 407 HOH D 561 SITE 3 AE5 9 HOH D 611 SITE 1 AE6 8 GLN A 253 PHE D 136 TYR D 216 ARG D 220 SITE 2 AE6 8 16A D 301 HOH D 421 HOH D 426 HOH D 474 SITE 1 AE7 9 GLN D 115 LYS D 172 LEU D 237 THR D 238 SITE 2 AE7 9 ASN D 239 HOH D 410 HOH D 442 HOH D 466 SITE 3 AE7 9 HOH D 491 SITE 1 AE8 5 LYS D 252 GLN D 253 ASP D 254 HOH D 448 SITE 2 AE8 5 HOH D 537 CRYST1 212.393 42.419 115.798 90.00 117.27 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004708 0.000000 0.002427 0.00000 SCALE2 0.000000 0.023574 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009716 0.00000