HEADER STRUCTURAL PROTEIN 21-APR-20 6WMD TITLE HUMAN SUN2-KASH4 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUN DOMAIN-CONTAINING PROTEIN 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN UNC-84 HOMOLOG B,RAB5-INTERACTING PROTEIN,RAB5IP, COMPND 5 SAD1/UNC-84 PROTEIN-LIKE 2; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NESPRIN-4; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: KASH DOMAIN-CONTAINING PROTEIN 4,KASH4,NUCLEAR ENVELOPE COMPND 11 SPECTRIN REPEAT PROTEIN 4; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SUN2, FRIGG, KIAA0668, RAB5IP, UNC84B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: SYNE4, C19ORF46; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LINC COMPLEX, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.E.CRUZ,T.U.SCHWARTZ REVDAT 3 18-OCT-23 6WMD 1 REMARK REVDAT 2 09-DEC-20 6WMD 1 JRNL REVDAT 1 02-DEC-20 6WMD 0 JRNL AUTH V.E.CRUZ,F.ESRA DEMIRCIOGLU,T.U.SCHWARTZ JRNL TITL STRUCTURAL ANALYSIS OF DIFFERENT LINC COMPLEXES REVEALS JRNL TITL 2 DISTINCT BINDING MODES. JRNL REF J.MOL.BIOL. V. 432 6028 2020 JRNL REFN ESSN 1089-8638 JRNL PMID 33058875 JRNL DOI 10.1016/J.JMB.2020.09.019 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17_3644 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 69.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 54661 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.184 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.640 REMARK 3 FREE R VALUE TEST SET COUNT : 1991 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 69.9400 - 3.6100 1.00 4126 156 0.1701 0.1930 REMARK 3 2 3.6100 - 2.8600 1.00 3868 146 0.1568 0.1690 REMARK 3 3 2.8600 - 2.5000 1.00 3824 145 0.1745 0.1713 REMARK 3 4 2.5000 - 2.2700 1.00 3785 143 0.1652 0.1787 REMARK 3 5 2.2700 - 2.1100 1.00 3758 142 0.1564 0.1930 REMARK 3 6 2.1100 - 1.9900 1.00 3760 143 0.1555 0.1829 REMARK 3 7 1.9900 - 1.8900 1.00 3726 140 0.1576 0.1847 REMARK 3 8 1.8900 - 1.8000 1.00 3726 141 0.1564 0.1669 REMARK 3 9 1.8000 - 1.7300 1.00 3720 141 0.1607 0.1767 REMARK 3 10 1.7300 - 1.6800 1.00 3706 140 0.1661 0.1881 REMARK 3 11 1.6800 - 1.6200 1.00 3680 139 0.1805 0.2221 REMARK 3 12 1.6200 - 1.5800 1.00 3705 141 0.1924 0.1864 REMARK 3 13 1.5800 - 1.5300 1.00 3695 139 0.2128 0.2414 REMARK 3 14 1.5300 - 1.5000 0.98 3591 135 0.2478 0.2440 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.129 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.625 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.12 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1796 REMARK 3 ANGLE : 0.846 2468 REMARK 3 CHIRALITY : 0.086 271 REMARK 3 PLANARITY : 0.007 326 REMARK 3 DIHEDRAL : 16.924 251 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 522 THROUGH 540 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.6620 98.9396 -9.1878 REMARK 3 T TENSOR REMARK 3 T11: 0.3029 T22: 0.2508 REMARK 3 T33: 0.2315 T12: -0.0061 REMARK 3 T13: 0.0075 T23: 0.0399 REMARK 3 L TENSOR REMARK 3 L11: 3.4096 L22: 4.0161 REMARK 3 L33: 9.8979 L12: -0.9325 REMARK 3 L13: -1.8460 L23: 0.1643 REMARK 3 S TENSOR REMARK 3 S11: 0.2938 S12: 0.5620 S13: 0.2425 REMARK 3 S21: -0.6314 S22: 0.1387 S23: 0.1036 REMARK 3 S31: -0.9238 S32: -0.2500 S33: -0.3998 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 541 THROUGH 651 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5626 86.5482 18.6948 REMARK 3 T TENSOR REMARK 3 T11: 0.1614 T22: 0.1676 REMARK 3 T33: 0.1251 T12: -0.0010 REMARK 3 T13: 0.0113 T23: 0.0415 REMARK 3 L TENSOR REMARK 3 L11: 1.4504 L22: 1.2814 REMARK 3 L33: 0.8753 L12: -0.6284 REMARK 3 L13: -0.0741 L23: 0.4463 REMARK 3 S TENSOR REMARK 3 S11: -0.0461 S12: -0.2977 S13: -0.1334 REMARK 3 S21: 0.2723 S22: 0.0995 S23: 0.1060 REMARK 3 S31: 0.1317 S32: -0.0006 S33: -0.0526 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 652 THROUGH 666 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.8818 91.9846 16.9818 REMARK 3 T TENSOR REMARK 3 T11: 0.2724 T22: 0.4087 REMARK 3 T33: 0.3490 T12: 0.0335 REMARK 3 T13: 0.0649 T23: -0.0275 REMARK 3 L TENSOR REMARK 3 L11: 4.0844 L22: 3.1673 REMARK 3 L33: 3.6716 L12: -0.2681 REMARK 3 L13: 0.1176 L23: 0.2288 REMARK 3 S TENSOR REMARK 3 S11: -0.1139 S12: -0.9100 S13: 0.2701 REMARK 3 S21: 0.7077 S22: 0.0583 S23: 0.5064 REMARK 3 S31: -0.1367 S32: -0.4752 S33: 0.0426 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 667 THROUGH 717 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.2902 88.0263 10.5190 REMARK 3 T TENSOR REMARK 3 T11: 0.1009 T22: 0.1342 REMARK 3 T33: 0.1439 T12: -0.0095 REMARK 3 T13: 0.0079 T23: 0.0243 REMARK 3 L TENSOR REMARK 3 L11: 2.1370 L22: 1.8728 REMARK 3 L33: 1.4416 L12: -0.7306 REMARK 3 L13: 0.1036 L23: 0.4210 REMARK 3 S TENSOR REMARK 3 S11: -0.0006 S12: -0.1119 S13: -0.0761 REMARK 3 S21: 0.0609 S22: 0.0114 S23: 0.2223 REMARK 3 S31: 0.0022 S32: -0.1327 S33: -0.0208 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 388 THROUGH 392 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.9233 89.7579 35.7201 REMARK 3 T TENSOR REMARK 3 T11: 1.0302 T22: 0.7050 REMARK 3 T33: 0.4760 T12: 0.0876 REMARK 3 T13: -0.2278 T23: -0.0574 REMARK 3 L TENSOR REMARK 3 L11: 0.0993 L22: 4.3720 REMARK 3 L33: 4.5848 L12: 0.6577 REMARK 3 L13: 0.6737 L23: 4.4786 REMARK 3 S TENSOR REMARK 3 S11: 0.0951 S12: -0.5798 S13: 0.2249 REMARK 3 S21: 0.5478 S22: -0.0306 S23: -0.4957 REMARK 3 S31: -0.1021 S32: 0.3713 S33: -0.0987 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 393 THROUGH 397 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2464 79.3357 28.3101 REMARK 3 T TENSOR REMARK 3 T11: 0.3050 T22: 0.4099 REMARK 3 T33: 0.1685 T12: 0.0094 REMARK 3 T13: -0.0192 T23: -0.0380 REMARK 3 L TENSOR REMARK 3 L11: 8.2097 L22: 8.1786 REMARK 3 L33: 5.8160 L12: 5.3648 REMARK 3 L13: 4.7575 L23: 3.6488 REMARK 3 S TENSOR REMARK 3 S11: 0.1229 S12: -0.6951 S13: -0.0060 REMARK 3 S21: 0.6170 S22: 0.1341 S23: -0.1548 REMARK 3 S31: -0.0541 S32: 0.1659 S33: -0.1671 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 398 THROUGH 404 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.1881 73.2299 23.1505 REMARK 3 T TENSOR REMARK 3 T11: 0.2661 T22: 0.2710 REMARK 3 T33: 0.2292 T12: 0.0177 REMARK 3 T13: -0.0029 T23: 0.0914 REMARK 3 L TENSOR REMARK 3 L11: 6.3367 L22: 2.5599 REMARK 3 L33: 4.3306 L12: -0.4627 REMARK 3 L13: 3.8320 L23: 0.2315 REMARK 3 S TENSOR REMARK 3 S11: 0.1045 S12: -0.5567 S13: -0.5824 REMARK 3 S21: 0.3301 S22: 0.1723 S23: 0.2280 REMARK 3 S31: 0.3606 S32: -0.2613 S33: -0.3953 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WMD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000248586. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54661 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 69.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 20.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 55.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4DXT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17% PEG 3350, 0.2M MAGNESIUM CHLORIDE, REMARK 280 0.1M BISTRIS/HCL, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 86.95450 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 86.95450 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 86.95450 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 86.95450 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 86.95450 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 86.95450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -102.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 80.75700 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 139.87523 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -80.75700 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 139.87523 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1229 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 516 REMARK 465 PRO A 517 REMARK 465 GLY A 518 REMARK 465 GLY A 519 REMARK 465 SER A 520 REMARK 465 GLY A 521 REMARK 465 GLY B 371 REMARK 465 PRO B 372 REMARK 465 GLY B 373 REMARK 465 GLY B 374 REMARK 465 SER B 375 REMARK 465 GLY B 376 REMARK 465 SER B 377 REMARK 465 GLY B 378 REMARK 465 GLY B 379 REMARK 465 PRO B 380 REMARK 465 CYS B 381 REMARK 465 CYS B 382 REMARK 465 SER B 383 REMARK 465 HIS B 384 REMARK 465 ALA B 385 REMARK 465 ARG B 386 REMARK 465 ILE B 387 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 657 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO A 594 O HOH A 901 1.96 REMARK 500 O TYR A 567 O HOH A 902 2.00 REMARK 500 OE2 GLU A 525 O HOH A 903 2.10 REMARK 500 O HOH A 1168 O HOH A 1235 2.15 REMARK 500 O HOH A 917 O HOH A 1124 2.16 REMARK 500 OD2 ASP A 645 O HOH A 904 2.17 REMARK 500 O HOH A 1172 O HOH A 1195 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 543 -31.49 70.36 REMARK 500 LEU A 581 -71.39 -99.18 REMARK 500 LYS A 644 -94.24 -114.84 REMARK 500 LEU A 655 78.58 -114.90 REMARK 500 ALA A 681 74.28 -155.12 REMARK 500 ASN B 399 43.72 -142.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1247 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH A1248 DISTANCE = 6.68 ANGSTROMS REMARK 525 HOH A1249 DISTANCE = 7.00 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 801 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 986 O REMARK 620 2 HOH A 986 O 94.7 REMARK 620 3 HOH A1002 O 89.3 81.3 REMARK 620 4 HOH A1002 O 94.0 87.6 168.7 REMARK 620 5 HOH A1181 O 97.3 166.7 93.2 97.1 REMARK 620 6 HOH A1181 O 173.5 83.1 84.4 92.0 84.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 802 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 931 O REMARK 620 2 HOH A 968 O 87.4 REMARK 620 3 HOH A1008 O 89.3 87.8 REMARK 620 4 HOH A1150 O 94.8 93.5 175.7 REMARK 620 5 HOH A1155 O 94.6 177.7 93.3 85.2 REMARK 620 6 HOH A1210 O 166.8 79.6 92.4 83.9 98.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 802 DBREF 6WMD A 522 717 UNP Q9UH99 SUN2_HUMAN 522 717 DBREF 6WMD B 377 404 UNP Q8N205 SYNE4_HUMAN 377 404 SEQADV 6WMD GLY A 516 UNP Q9UH99 EXPRESSION TAG SEQADV 6WMD PRO A 517 UNP Q9UH99 EXPRESSION TAG SEQADV 6WMD GLY A 518 UNP Q9UH99 EXPRESSION TAG SEQADV 6WMD GLY A 519 UNP Q9UH99 EXPRESSION TAG SEQADV 6WMD SER A 520 UNP Q9UH99 EXPRESSION TAG SEQADV 6WMD GLY A 521 UNP Q9UH99 EXPRESSION TAG SEQADV 6WMD GLY B 371 UNP Q8N205 EXPRESSION TAG SEQADV 6WMD PRO B 372 UNP Q8N205 EXPRESSION TAG SEQADV 6WMD GLY B 373 UNP Q8N205 EXPRESSION TAG SEQADV 6WMD GLY B 374 UNP Q8N205 EXPRESSION TAG SEQADV 6WMD SER B 375 UNP Q8N205 EXPRESSION TAG SEQADV 6WMD GLY B 376 UNP Q8N205 EXPRESSION TAG SEQRES 1 A 202 GLY PRO GLY GLY SER GLY GLY VAL THR GLU GLU GLN VAL SEQRES 2 A 202 HIS HIS ILE VAL LYS GLN ALA LEU GLN ARG TYR SER GLU SEQRES 3 A 202 ASP ARG ILE GLY LEU ALA ASP TYR ALA LEU GLU SER GLY SEQRES 4 A 202 GLY ALA SER VAL ILE SER THR ARG CYS SER GLU THR TYR SEQRES 5 A 202 GLU THR LYS THR ALA LEU LEU SER LEU PHE GLY ILE PRO SEQRES 6 A 202 LEU TRP TYR HIS SER GLN SER PRO ARG VAL ILE LEU GLN SEQRES 7 A 202 PRO ASP VAL HIS PRO GLY ASN CYS TRP ALA PHE GLN GLY SEQRES 8 A 202 PRO GLN GLY PHE ALA VAL VAL ARG LEU SER ALA ARG ILE SEQRES 9 A 202 ARG PRO THR ALA VAL THR LEU GLU HIS VAL PRO LYS ALA SEQRES 10 A 202 LEU SER PRO ASN SER THR ILE SER SER ALA PRO LYS ASP SEQRES 11 A 202 PHE ALA ILE PHE GLY PHE ASP GLU ASP LEU GLN GLN GLU SEQRES 12 A 202 GLY THR LEU LEU GLY LYS PHE THR TYR ASP GLN ASP GLY SEQRES 13 A 202 GLU PRO ILE GLN THR PHE HIS PHE GLN ALA PRO THR MET SEQRES 14 A 202 ALA THR TYR GLN VAL VAL GLU LEU ARG ILE LEU THR ASN SEQRES 15 A 202 TRP GLY HIS PRO GLU TYR THR CYS ILE TYR ARG PHE ARG SEQRES 16 A 202 VAL HIS GLY GLU PRO ALA HIS SEQRES 1 B 34 GLY PRO GLY GLY SER GLY SER GLY GLY PRO CYS CYS SER SEQRES 2 B 34 HIS ALA ARG ILE PRO ARG THR PRO TYR LEU VAL LEU SER SEQRES 3 B 34 TYR VAL ASN GLY LEU PRO PRO VAL HET MG A 801 1 HET MG A 802 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG 2(MG 2+) FORMUL 5 HOH *367(H2 O) HELIX 1 AA1 THR A 524 GLU A 541 1 18 HELIX 2 AA2 LEU A 551 GLY A 555 5 5 HELIX 3 AA3 SER A 560 CYS A 563 5 4 HELIX 4 AA4 SER A 587 GLN A 593 5 7 HELIX 5 AA5 PRO A 630 THR A 638 5 9 SHEET 1 AA1 3 SER A 557 VAL A 558 0 SHEET 2 AA1 3 GLY A 609 GLU A 627 -1 O ARG A 614 N SER A 557 SHEET 3 AA1 3 ILE A 674 HIS A 678 -1 O PHE A 677 N VAL A 624 SHEET 1 AA2 5 THR A 660 THR A 666 0 SHEET 2 AA2 5 ASP A 645 PHE A 651 -1 N ILE A 648 O LEU A 662 SHEET 3 AA2 5 TYR A 687 ILE A 694 -1 O ARG A 693 N ALA A 647 SHEET 4 AA2 5 GLY A 609 GLU A 627 -1 N VAL A 613 O VAL A 690 SHEET 5 AA2 5 ARG A 708 PRO A 715 -1 O HIS A 712 N ALA A 623 SHEET 1 AA3 3 ILE A 579 TYR A 583 0 SHEET 2 AA3 3 ALA A 572 LEU A 576 -1 N LEU A 574 O LEU A 581 SHEET 3 AA3 3 VAL B 394 TYR B 397 -1 O SER B 396 N LEU A 573 SHEET 1 AA4 2 TRP A 602 GLN A 605 0 SHEET 2 AA4 2 TYR A 703 ILE A 706 -1 O ILE A 706 N TRP A 602 LINK MG MG A 801 O HOH A 986 1555 1555 1.95 LINK MG MG A 801 O HOH A 986 1555 8675 2.22 LINK MG MG A 801 O HOH A1002 1555 1555 2.18 LINK MG MG A 801 O HOH A1002 1555 8675 1.97 LINK MG MG A 801 O HOH A1181 1555 1555 1.97 LINK MG MG A 801 O HOH A1181 1555 8675 2.22 LINK MG MG A 802 O HOH A 931 1555 1555 2.11 LINK MG MG A 802 O HOH A 968 1555 1555 2.13 LINK MG MG A 802 O HOH A1008 1555 1555 2.02 LINK MG MG A 802 O HOH A1150 1555 1555 2.16 LINK MG MG A 802 O HOH A1155 1555 1555 2.20 LINK MG MG A 802 O HOH A1210 1555 1555 2.09 SITE 1 AC1 3 HOH A 986 HOH A1002 HOH A1181 SITE 1 AC2 6 HOH A 931 HOH A 968 HOH A1008 HOH A1150 SITE 2 AC2 6 HOH A1155 HOH A1210 CRYST1 80.757 80.757 173.909 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012383 0.007149 0.000000 0.00000 SCALE2 0.000000 0.014298 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005750 0.00000