HEADER STRUCTURAL PROTEIN 21-APR-20 6WMF TITLE HUMAN SUN2-KASH5 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUN DOMAIN-CONTAINING PROTEIN 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN UNC-84 HOMOLOG B,RAB5-INTERACTING PROTEIN,RAB5IP, COMPND 5 SAD1/UNC-84 PROTEIN-LIKE 2; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PROTEIN KASH5; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: COILED-COIL DOMAIN-CONTAINING PROTEIN 155,KASH DOMAIN- COMPND 11 CONTAINING PROTEIN 5; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SUN2, FRIGG, KIAA0668, RAB5IP, UNC84B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: CCDC155, KASH5; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LINC COMPLEX, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.E.CRUZ,T.U.SCHWARTZ REVDAT 3 18-OCT-23 6WMF 1 REMARK REVDAT 2 09-DEC-20 6WMF 1 JRNL REVDAT 1 02-DEC-20 6WMF 0 JRNL AUTH V.E.CRUZ,F.ESRA DEMIRCIOGLU,T.U.SCHWARTZ JRNL TITL STRUCTURAL ANALYSIS OF DIFFERENT LINC COMPLEXES REVEALS JRNL TITL 2 DISTINCT BINDING MODES. JRNL REF J.MOL.BIOL. V. 432 6028 2020 JRNL REFN ESSN 1089-8638 JRNL PMID 33058875 JRNL DOI 10.1016/J.JMB.2020.09.019 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17_3644 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 83.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 9383 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 938 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 83.1500 - 4.9800 1.00 1296 144 0.2193 0.2951 REMARK 3 2 4.9800 - 3.9500 1.00 1219 137 0.1885 0.2300 REMARK 3 3 3.9500 - 3.4500 1.00 1218 135 0.2055 0.2609 REMARK 3 4 3.4500 - 3.1400 1.00 1197 133 0.2297 0.2957 REMARK 3 5 3.1400 - 2.9100 1.00 1192 131 0.2647 0.3522 REMARK 3 6 2.9100 - 2.7400 1.00 1190 134 0.3250 0.4249 REMARK 3 7 2.7400 - 2.6000 0.95 1133 124 0.3336 0.4353 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.502 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.367 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 79.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 96.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1628 REMARK 3 ANGLE : 1.213 2222 REMARK 3 CHIRALITY : 0.070 247 REMARK 3 PLANARITY : 0.008 288 REMARK 3 DIHEDRAL : 22.284 216 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 522 THROUGH 540 ) REMARK 3 ORIGIN FOR THE GROUP (A): -45.0827 115.2945 240.9641 REMARK 3 T TENSOR REMARK 3 T11: 1.2142 T22: 1.0905 REMARK 3 T33: 0.6971 T12: 0.0439 REMARK 3 T13: -0.1025 T23: 0.0828 REMARK 3 L TENSOR REMARK 3 L11: 6.1194 L22: 2.7841 REMARK 3 L33: 5.8030 L12: 4.1243 REMARK 3 L13: -5.9107 L23: -3.8673 REMARK 3 S TENSOR REMARK 3 S11: 0.0661 S12: 1.1447 S13: 0.7819 REMARK 3 S21: 0.0746 S22: 0.3727 S23: 0.7181 REMARK 3 S31: -1.5599 S32: -3.0268 S33: 0.0050 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 541 THROUGH 581 ) REMARK 3 ORIGIN FOR THE GROUP (A): -43.8924 100.8977 272.1792 REMARK 3 T TENSOR REMARK 3 T11: 0.9067 T22: 0.7484 REMARK 3 T33: 0.5359 T12: 0.0146 REMARK 3 T13: -0.0269 T23: 0.0421 REMARK 3 L TENSOR REMARK 3 L11: 4.8653 L22: 1.9042 REMARK 3 L33: 5.2548 L12: 1.3781 REMARK 3 L13: 1.7774 L23: 0.6063 REMARK 3 S TENSOR REMARK 3 S11: 0.5630 S12: -0.7083 S13: -0.4177 REMARK 3 S21: 0.1208 S22: -0.0645 S23: -0.1156 REMARK 3 S31: 1.2135 S32: -0.0020 S33: -0.5229 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 582 THROUGH 608 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.5404 98.7861 271.9979 REMARK 3 T TENSOR REMARK 3 T11: 0.7545 T22: 0.6085 REMARK 3 T33: 0.4259 T12: -0.0267 REMARK 3 T13: -0.1104 T23: 0.0129 REMARK 3 L TENSOR REMARK 3 L11: 7.8382 L22: 3.4756 REMARK 3 L33: 8.9202 L12: -1.4752 REMARK 3 L13: 1.0657 L23: -2.6004 REMARK 3 S TENSOR REMARK 3 S11: -0.0349 S12: -1.1087 S13: 0.1365 REMARK 3 S21: 0.4198 S22: -0.0228 S23: -0.1476 REMARK 3 S31: -0.3578 S32: -0.0959 S33: 0.0136 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 609 THROUGH 634 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.2416 97.8467 263.1363 REMARK 3 T TENSOR REMARK 3 T11: 0.8466 T22: 0.6787 REMARK 3 T33: 0.3697 T12: -0.0933 REMARK 3 T13: -0.1154 T23: 0.0538 REMARK 3 L TENSOR REMARK 3 L11: 5.2728 L22: 3.9526 REMARK 3 L33: 2.1985 L12: -1.1618 REMARK 3 L13: -1.2514 L23: 2.3214 REMARK 3 S TENSOR REMARK 3 S11: -0.4269 S12: 0.3856 S13: -0.0420 REMARK 3 S21: 0.3192 S22: 0.3740 S23: 0.2889 REMARK 3 S31: 0.5645 S32: -0.2603 S33: 0.1973 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 635 THROUGH 659 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.7763 90.0126 265.0924 REMARK 3 T TENSOR REMARK 3 T11: 1.1046 T22: 0.5062 REMARK 3 T33: 0.7086 T12: -0.0027 REMARK 3 T13: -0.1853 T23: 0.1071 REMARK 3 L TENSOR REMARK 3 L11: 2.0321 L22: 3.7639 REMARK 3 L33: 9.7301 L12: -1.1235 REMARK 3 L13: -4.1252 L23: 1.6555 REMARK 3 S TENSOR REMARK 3 S11: -0.8835 S12: -0.4755 S13: -1.3255 REMARK 3 S21: 0.0765 S22: 0.3235 S23: -0.1268 REMARK 3 S31: 1.5123 S32: -0.0914 S33: 0.3415 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 660 THROUGH 707 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.9400 91.1552 261.3458 REMARK 3 T TENSOR REMARK 3 T11: 0.7728 T22: 0.6846 REMARK 3 T33: 0.5628 T12: -0.0421 REMARK 3 T13: -0.0952 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 7.1724 L22: 5.4660 REMARK 3 L33: 5.1103 L12: -2.4130 REMARK 3 L13: -0.3582 L23: -1.0428 REMARK 3 S TENSOR REMARK 3 S11: 0.2423 S12: 0.4201 S13: -0.8272 REMARK 3 S21: -0.7530 S22: 0.1222 S23: 0.2674 REMARK 3 S31: 1.2076 S32: 0.2528 S33: -0.4088 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 708 THROUGH 717 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.4513 101.7201 260.6964 REMARK 3 T TENSOR REMARK 3 T11: 0.7869 T22: 0.9746 REMARK 3 T33: 0.4734 T12: 0.1618 REMARK 3 T13: 0.0211 T23: -0.1241 REMARK 3 L TENSOR REMARK 3 L11: 7.8016 L22: 7.5695 REMARK 3 L33: 9.3428 L12: 3.8577 REMARK 3 L13: 7.2335 L23: 0.2011 REMARK 3 S TENSOR REMARK 3 S11: 0.8373 S12: -0.9163 S13: 1.2197 REMARK 3 S21: 0.3859 S22: -0.8783 S23: 0.4092 REMARK 3 S31: 0.1263 S32: -1.3027 S33: 0.5311 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 783 THROUGH 797 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.5396 106.2791 277.6287 REMARK 3 T TENSOR REMARK 3 T11: 0.9228 T22: 0.9697 REMARK 3 T33: 0.7037 T12: -0.1002 REMARK 3 T13: -0.0865 T23: -0.0823 REMARK 3 L TENSOR REMARK 3 L11: 2.1959 L22: 5.3144 REMARK 3 L33: 5.7006 L12: -0.7378 REMARK 3 L13: 0.7386 L23: 5.1184 REMARK 3 S TENSOR REMARK 3 S11: 0.0581 S12: 0.1780 S13: -0.4912 REMARK 3 S21: 1.5534 S22: 1.7220 S23: -2.3175 REMARK 3 S31: 0.4640 S32: 0.9188 S33: -1.2471 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WMF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000248587. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9383 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 83.150 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 15.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 37.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4DXT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG3000, 0.1M BISTRIS/HCL, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 39.21750 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 22.64223 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 83.14700 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 39.21750 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 22.64223 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 83.14700 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 39.21750 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 22.64223 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 83.14700 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 39.21750 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 22.64223 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 83.14700 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 39.21750 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 22.64223 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 83.14700 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 39.21750 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 22.64223 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 83.14700 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 45.28447 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 166.29400 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 45.28447 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 166.29400 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 45.28447 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 166.29400 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 45.28447 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 166.29400 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 45.28447 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 166.29400 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 45.28447 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 166.29400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 39.21750 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 203.78011 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -156.87000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 135.85341 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 516 REMARK 465 PRO A 517 REMARK 465 GLY A 518 REMARK 465 GLY A 519 REMARK 465 SER A 520 REMARK 465 GLY A 521 REMARK 465 LEU A 576 REMARK 465 PHE A 577 REMARK 465 GLY A 578 REMARK 465 GLN A 656 REMARK 465 GLN A 680 REMARK 465 ALA A 681 REMARK 465 PRO A 682 REMARK 465 THR A 683 REMARK 465 MET A 684 REMARK 465 GLY B 771 REMARK 465 PRO B 772 REMARK 465 GLY B 773 REMARK 465 GLY B 774 REMARK 465 SER B 775 REMARK 465 GLY B 776 REMARK 465 GLY B 777 REMARK 465 PRO B 778 REMARK 465 SER B 779 REMARK 465 PRO B 780 REMARK 465 PRO B 781 REMARK 465 PRO B 782 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 620 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 653 CG CD OE1 OE2 REMARK 470 HIS A 717 CG ND1 CD2 CE1 NE2 REMARK 470 TRP B 784 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 784 CZ3 CH2 REMARK 470 GLN B 793 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 541 59.37 -96.47 REMARK 500 ARG A 543 -22.66 76.39 REMARK 500 ARG A 562 42.45 -103.44 REMARK 500 TYR A 567 100.67 -59.36 REMARK 500 LYS A 570 -32.29 60.16 REMARK 500 THR A 571 -80.29 -47.87 REMARK 500 TRP A 582 137.43 -174.39 REMARK 500 SER A 616 -14.18 -48.98 REMARK 500 ASN A 636 24.89 28.53 REMARK 500 LYS A 644 -107.88 -96.20 REMARK 500 HIS B 786 112.73 -161.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 581 TRP A 582 -144.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 801 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 590 O REMARK 620 2 GLN A 593 O 69.0 REMARK 620 3 ASP A 595 O 156.9 100.6 REMARK 620 4 ASN A 600 O 120.0 168.6 73.4 REMARK 620 5 TYR A 707 O 75.3 98.2 127.5 78.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 801 DBREF 6WMF A 522 717 UNP Q9UH99 SUN2_HUMAN 522 717 DBREF 6WMF B 777 797 UNP Q8N6L0 KASH5_HUMAN 542 562 SEQADV 6WMF GLY A 516 UNP Q9UH99 EXPRESSION TAG SEQADV 6WMF PRO A 517 UNP Q9UH99 EXPRESSION TAG SEQADV 6WMF GLY A 518 UNP Q9UH99 EXPRESSION TAG SEQADV 6WMF GLY A 519 UNP Q9UH99 EXPRESSION TAG SEQADV 6WMF SER A 520 UNP Q9UH99 EXPRESSION TAG SEQADV 6WMF GLY A 521 UNP Q9UH99 EXPRESSION TAG SEQADV 6WMF GLY B 771 UNP Q8N6L0 EXPRESSION TAG SEQADV 6WMF PRO B 772 UNP Q8N6L0 EXPRESSION TAG SEQADV 6WMF GLY B 773 UNP Q8N6L0 EXPRESSION TAG SEQADV 6WMF GLY B 774 UNP Q8N6L0 EXPRESSION TAG SEQADV 6WMF SER B 775 UNP Q8N6L0 EXPRESSION TAG SEQADV 6WMF GLY B 776 UNP Q8N6L0 EXPRESSION TAG SEQRES 1 A 202 GLY PRO GLY GLY SER GLY GLY VAL THR GLU GLU GLN VAL SEQRES 2 A 202 HIS HIS ILE VAL LYS GLN ALA LEU GLN ARG TYR SER GLU SEQRES 3 A 202 ASP ARG ILE GLY LEU ALA ASP TYR ALA LEU GLU SER GLY SEQRES 4 A 202 GLY ALA SER VAL ILE SER THR ARG CYS SER GLU THR TYR SEQRES 5 A 202 GLU THR LYS THR ALA LEU LEU SER LEU PHE GLY ILE PRO SEQRES 6 A 202 LEU TRP TYR HIS SER GLN SER PRO ARG VAL ILE LEU GLN SEQRES 7 A 202 PRO ASP VAL HIS PRO GLY ASN CYS TRP ALA PHE GLN GLY SEQRES 8 A 202 PRO GLN GLY PHE ALA VAL VAL ARG LEU SER ALA ARG ILE SEQRES 9 A 202 ARG PRO THR ALA VAL THR LEU GLU HIS VAL PRO LYS ALA SEQRES 10 A 202 LEU SER PRO ASN SER THR ILE SER SER ALA PRO LYS ASP SEQRES 11 A 202 PHE ALA ILE PHE GLY PHE ASP GLU ASP LEU GLN GLN GLU SEQRES 12 A 202 GLY THR LEU LEU GLY LYS PHE THR TYR ASP GLN ASP GLY SEQRES 13 A 202 GLU PRO ILE GLN THR PHE HIS PHE GLN ALA PRO THR MET SEQRES 14 A 202 GLY THR TYR GLN VAL VAL GLU LEU ARG ILE LEU THR ASN SEQRES 15 A 202 TRP GLY HIS PRO GLU TYR THR CYS ILE TYR ARG PHE ARG SEQRES 16 A 202 VAL HIS GLY GLU PRO ALA HIS SEQRES 1 B 27 GLY PRO GLY GLY SER GLY GLY PRO SER PRO PRO PRO THR SEQRES 2 B 27 TRP PRO HIS LEU GLN LEU CYS TYR LEU GLN PRO PRO PRO SEQRES 3 B 27 VAL HET K A 801 1 HETNAM K POTASSIUM ION FORMUL 3 K K 1+ FORMUL 4 HOH *11(H2 O) HELIX 1 AA1 THR A 524 GLU A 541 1 18 HELIX 2 AA2 SER A 560 CYS A 563 5 4 HELIX 3 AA3 SER A 587 GLN A 593 5 7 HELIX 4 AA4 SER A 634 THR A 638 5 5 SHEET 1 AA1 3 SER A 557 VAL A 558 0 SHEET 2 AA1 3 GLY A 609 GLU A 627 -1 O ARG A 614 N SER A 557 SHEET 3 AA1 3 ILE A 674 HIS A 678 -1 O PHE A 677 N VAL A 624 SHEET 1 AA2 5 THR A 660 THR A 666 0 SHEET 2 AA2 5 ASP A 645 PHE A 651 -1 N PHE A 646 O PHE A 665 SHEET 3 AA2 5 TYR A 687 ILE A 694 -1 O ARG A 693 N ALA A 647 SHEET 4 AA2 5 GLY A 609 GLU A 627 -1 N LEU A 615 O GLN A 688 SHEET 5 AA2 5 ARG A 708 PRO A 715 -1 O HIS A 712 N ALA A 623 SHEET 1 AA3 3 TRP A 582 HIS A 584 0 SHEET 2 AA3 3 ALA A 572 SER A 575 -1 N LEU A 574 O TRP A 582 SHEET 3 AA3 3 GLN B 788 TYR B 791 -1 O GLN B 788 N SER A 575 SHEET 1 AA4 2 TRP A 602 GLN A 605 0 SHEET 2 AA4 2 TYR A 703 ILE A 706 -1 O ILE A 706 N TRP A 602 LINK O VAL A 590 K K A 801 1555 1555 2.84 LINK O GLN A 593 K K A 801 1555 1555 2.75 LINK O ASP A 595 K K A 801 1555 1555 2.81 LINK O ASN A 600 K K A 801 1555 1555 3.48 LINK O TYR A 707 K K A 801 1555 1555 2.99 SITE 1 AC1 5 VAL A 590 GLN A 593 ASP A 595 ASN A 600 SITE 2 AC1 5 TYR A 707 CRYST1 78.435 78.435 249.441 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012749 0.007361 0.000000 0.00000 SCALE2 0.000000 0.014722 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004009 0.00000