HEADER TRANSCRIPTION 22-APR-20 6WN5 TITLE 1.52 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF TRANSCRIPTIONAL TITLE 2 REGULATOR HDFR FROM KLEBSIELLA PNEUMONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR HDFR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE SUBSP. PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 72407; SOURCE 4 GENE: HDFR, B6R99_21715; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: (DE)MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, TRANSCRIPTIONAL REGULATOR HDFR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,L.SHUVALOVA,O.KIRYUKHINA,I.DUBROVSKA,K.J.F.SATCHELL,CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 2 14-JUN-23 6WN5 1 JRNL REVDAT 1 06-MAY-20 6WN5 0 JRNL AUTH N.L.INNISS,T.J.KOCHAN,G.MINASOV,Z.WAWRZAK,C.CHANG,K.TAN, JRNL AUTH 2 L.SHUVALOVA,O.KIRYUKHINA,S.PSHENYCHNYI,R.WU,I.DUBROVSKA, JRNL AUTH 3 G.BABNIGG,M.ENDRES,W.F.ANDERSON,A.R.HAUSER,A.JOACHIMIAK, JRNL AUTH 4 K.J.F.SATCHELL JRNL TITL A STRUCTURAL SYSTEMS BIOLOGY APPROACH TO HIGH-RISK CG23 JRNL TITL 2 KLEBSIELLA PNEUMONIAE. JRNL REF MICROBIOL RESOUR ANNOUNC V. 12 01322 2023 JRNL REFN ISSN 2576-098X JRNL PMID 36695589 JRNL DOI 10.1128/MRA.01013-22 REMARK 2 REMARK 2 RESOLUTION. 1.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0257 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.86 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 30411 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1656 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.52 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2183 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE SET COUNT : 131 REMARK 3 BIN FREE R VALUE : 0.2740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1399 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 168 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.67000 REMARK 3 B22 (A**2) : 0.67000 REMARK 3 B33 (A**2) : -1.34000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.078 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.077 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.055 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.973 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1636 ; 0.008 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1464 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2252 ; 1.499 ; 1.636 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3427 ; 0.405 ; 1.569 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 212 ; 5.341 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 91 ;29.971 ;23.077 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 273 ;10.813 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;16.051 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 205 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1925 ; 0.055 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 349 ; 0.050 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 45 A 63 REMARK 3 ORIGIN FOR THE GROUP (A): 18.8502 23.0261 10.0391 REMARK 3 T TENSOR REMARK 3 T11: 0.0753 T22: 0.0373 REMARK 3 T33: 0.0484 T12: 0.0258 REMARK 3 T13: -0.0524 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 2.1939 L22: 3.8188 REMARK 3 L33: 1.4020 L12: -0.5931 REMARK 3 L13: 0.3901 L23: 0.5126 REMARK 3 S TENSOR REMARK 3 S11: -0.1770 S12: -0.2373 S13: 0.1327 REMARK 3 S21: 0.2360 S22: 0.0276 S23: -0.0970 REMARK 3 S31: -0.0691 S32: 0.0244 S33: 0.1494 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 64 A 106 REMARK 3 ORIGIN FOR THE GROUP (A): 23.3130 28.6365 11.7066 REMARK 3 T TENSOR REMARK 3 T11: 0.1476 T22: 0.0281 REMARK 3 T33: 0.1379 T12: 0.0010 REMARK 3 T13: -0.1203 T23: -0.0232 REMARK 3 L TENSOR REMARK 3 L11: 3.0173 L22: 0.8125 REMARK 3 L33: 2.5036 L12: -0.3797 REMARK 3 L13: 1.1642 L23: 0.4660 REMARK 3 S TENSOR REMARK 3 S11: -0.3151 S12: -0.1656 S13: 0.4229 REMARK 3 S21: 0.2139 S22: 0.0685 S23: -0.2096 REMARK 3 S31: -0.3176 S32: 0.1036 S33: 0.2466 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 107 A 128 REMARK 3 ORIGIN FOR THE GROUP (A): 27.5004 10.9648 11.7762 REMARK 3 T TENSOR REMARK 3 T11: 0.1107 T22: 0.0563 REMARK 3 T33: 0.0507 T12: 0.0322 REMARK 3 T13: -0.0286 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.9384 L22: 3.9387 REMARK 3 L33: 2.7149 L12: 0.4650 REMARK 3 L13: 0.6054 L23: 2.1187 REMARK 3 S TENSOR REMARK 3 S11: -0.1568 S12: -0.0622 S13: 0.0537 REMARK 3 S21: 0.4199 S22: 0.1151 S23: 0.0359 REMARK 3 S31: 0.2540 S32: 0.0766 S33: 0.0417 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 129 A 178 REMARK 3 ORIGIN FOR THE GROUP (A): 28.8713 7.4030 -1.8557 REMARK 3 T TENSOR REMARK 3 T11: 0.0157 T22: 0.0477 REMARK 3 T33: 0.0176 T12: 0.0039 REMARK 3 T13: -0.0127 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 2.6775 L22: 2.9203 REMARK 3 L33: 2.3814 L12: -0.6324 REMARK 3 L13: 0.0259 L23: 0.5653 REMARK 3 S TENSOR REMARK 3 S11: -0.0150 S12: 0.2355 S13: 0.1081 REMARK 3 S21: 0.2024 S22: 0.0574 S23: -0.2023 REMARK 3 S31: 0.0891 S32: 0.0105 S33: -0.0424 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 179 A 196 REMARK 3 ORIGIN FOR THE GROUP (A): 21.1246 2.9788 6.1772 REMARK 3 T TENSOR REMARK 3 T11: 0.0844 T22: 0.0719 REMARK 3 T33: 0.0247 T12: -0.0154 REMARK 3 T13: 0.0006 T23: 0.0163 REMARK 3 L TENSOR REMARK 3 L11: 5.6732 L22: 2.4699 REMARK 3 L33: 2.4360 L12: -0.8354 REMARK 3 L13: -0.8823 L23: 1.9633 REMARK 3 S TENSOR REMARK 3 S11: -0.0582 S12: -0.0426 S13: 0.0311 REMARK 3 S21: 0.2852 S22: -0.0129 S23: 0.1765 REMARK 3 S31: 0.2805 S32: -0.2569 S33: 0.0711 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 197 A 214 REMARK 3 ORIGIN FOR THE GROUP (A): 29.3027 19.5440 15.9629 REMARK 3 T TENSOR REMARK 3 T11: 0.1409 T22: 0.0880 REMARK 3 T33: 0.1025 T12: 0.0692 REMARK 3 T13: -0.1136 T23: -0.0674 REMARK 3 L TENSOR REMARK 3 L11: 0.6921 L22: 6.3485 REMARK 3 L33: 1.4043 L12: 0.2818 REMARK 3 L13: 0.7190 L23: 1.7666 REMARK 3 S TENSOR REMARK 3 S11: -0.2176 S12: -0.0593 S13: 0.1690 REMARK 3 S21: 0.2132 S22: 0.2408 S23: -0.3594 REMARK 3 S31: -0.0300 S32: 0.1321 S33: -0.0232 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 215 A 228 REMARK 3 ORIGIN FOR THE GROUP (A): 18.7017 27.3196 21.6223 REMARK 3 T TENSOR REMARK 3 T11: 0.2335 T22: 0.1853 REMARK 3 T33: 0.1905 T12: 0.0549 REMARK 3 T13: -0.0307 T23: -0.0501 REMARK 3 L TENSOR REMARK 3 L11: 1.9975 L22: 8.6212 REMARK 3 L33: 0.8288 L12: -0.0566 REMARK 3 L13: -0.5216 L23: 1.0743 REMARK 3 S TENSOR REMARK 3 S11: -0.0960 S12: -0.5340 S13: 0.1853 REMARK 3 S21: 0.3944 S22: -0.1935 S23: 0.3182 REMARK 3 S31: 0.0753 S32: 0.1455 S33: 0.2895 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6WN5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000248658. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND(111) REMARK 200 OPTICS : BE REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32133 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.520 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : 0.05700 REMARK 200 FOR THE DATA SET : 44.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.50 REMARK 200 R MERGE FOR SHELL (I) : 0.78300 REMARK 200 R SYM FOR SHELL (I) : 0.78300 REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 7.8 MG/ML, 0.5M SODIUM REMARK 280 CHLORIDE, 0.01M TRIS PH 8.3; SCREEN (PACT, E10): 0.2 M SODIUM/ REMARK 280 POTASSIUM PHOSPHATE, 20% (W/V) PEG 3350, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.56600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 31.19450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 31.19450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 77.34900 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 31.19450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 31.19450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 25.78300 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 31.19450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.19450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 77.34900 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 31.19450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.19450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 25.78300 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 51.56600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -75.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 301 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 457 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 513 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 520 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 ASN A 2 REMARK 465 LEU A 3 REMARK 465 PHE A 4 REMARK 465 THR A 5 REMARK 465 ARG A 6 REMARK 465 HIS A 7 REMARK 465 ARG A 8 REMARK 465 ASN A 9 REMARK 465 ASN A 10 REMARK 465 ILE A 11 REMARK 465 ARG A 12 REMARK 465 LEU A 13 REMARK 465 THR A 14 REMARK 465 THR A 15 REMARK 465 ALA A 16 REMARK 465 GLY A 17 REMARK 465 GLU A 18 REMARK 465 LYS A 19 REMARK 465 LEU A 20 REMARK 465 LEU A 21 REMARK 465 PRO A 22 REMARK 465 TYR A 23 REMARK 465 ALA A 24 REMARK 465 GLU A 25 REMARK 465 THR A 26 REMARK 465 LEU A 27 REMARK 465 MSE A 28 REMARK 465 ASN A 29 REMARK 465 THR A 30 REMARK 465 TRP A 31 REMARK 465 GLN A 32 REMARK 465 ALA A 33 REMARK 465 ALA A 34 REMARK 465 ARG A 35 REMARK 465 LYS A 36 REMARK 465 GLU A 37 REMARK 465 VAL A 38 REMARK 465 ALA A 39 REMARK 465 HIS A 40 REMARK 465 SER A 41 REMARK 465 SER A 42 REMARK 465 ARG A 43 REMARK 465 HIS A 44 REMARK 465 GLN A 146 REMARK 465 ASN A 147 REMARK 465 GLU A 148 REMARK 465 VAL A 149 REMARK 465 GLY A 150 REMARK 465 LEU A 151 REMARK 465 ILE A 152 REMARK 465 GLY A 153 REMARK 465 SER A 154 REMARK 465 ASP A 155 REMARK 465 GLU A 229 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MSE A 59 -31.42 -154.73 REMARK 500 PRO A 71 40.84 -65.03 REMARK 500 LEU A 201 -165.33 -109.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP96857 RELATED DB: TARGETTRACK DBREF1 6WN5 A 2 229 UNP A0A657RSZ5_KLEPN DBREF2 6WN5 A A0A657RSZ5 46 273 SEQADV 6WN5 SER A -2 UNP A0A657RSZ EXPRESSION TAG SEQADV 6WN5 ASN A -1 UNP A0A657RSZ EXPRESSION TAG SEQADV 6WN5 ALA A 0 UNP A0A657RSZ EXPRESSION TAG SEQADV 6WN5 MSE A 1 UNP A0A657RSZ EXPRESSION TAG SEQRES 1 A 232 SER ASN ALA MSE ASN LEU PHE THR ARG HIS ARG ASN ASN SEQRES 2 A 232 ILE ARG LEU THR THR ALA GLY GLU LYS LEU LEU PRO TYR SEQRES 3 A 232 ALA GLU THR LEU MSE ASN THR TRP GLN ALA ALA ARG LYS SEQRES 4 A 232 GLU VAL ALA HIS SER SER ARG HIS ASN GLU PHE SER ILE SEQRES 5 A 232 GLY ALA SER ALA SER LEU TRP GLU CYS MSE LEU ASN GLY SEQRES 6 A 232 TRP LEU GLY THR LEU TYR SER ALA PRO TYR ASN LEU GLN SEQRES 7 A 232 PHE GLU ALA ARG ILE ALA GLN ARG GLN SER LEU VAL LYS SEQRES 8 A 232 GLN LEU HIS GLU ARG GLN LEU ASP LEU LEU ILE THR THR SEQRES 9 A 232 GLU SER PRO LYS MSE ASP GLU LEU SER SER GLN LEU LEU SEQRES 10 A 232 GLY ASN PHE THR LEU ALA LEU TYR CYS ALA SER PRO ALA SEQRES 11 A 232 LYS ASN ARG ASN GLU LEU ASN TYR LEU ARG LEU GLU TRP SEQRES 12 A 232 GLY PRO ASP PHE GLN GLN ASN GLU VAL GLY LEU ILE GLY SEQRES 13 A 232 SER ASP ASP VAL PRO LEU LEU THR THR SER SER ALA GLU SEQRES 14 A 232 LEU ILE TYR GLN GLN LEU SER ARG LEU ASN GLY CYS CYS SEQRES 15 A 232 TRP LEU PRO ALA ARG TRP ALA LYS GLU LYS HIS GLY LEU SEQRES 16 A 232 HIS THR VAL MSE ASP SER ALA THR LEU SER ARG PRO LEU SEQRES 17 A 232 TYR ALA ILE TRP LEU GLN ASN SER ASP LYS GLN ALA GLN SEQRES 18 A 232 ILE HIS GLU ILE LEU LYS ASN PRO ILE LEU GLU MODRES 6WN5 MSE A 59 MET MODIFIED RESIDUE MODRES 6WN5 MSE A 106 MET MODIFIED RESIDUE MODRES 6WN5 MSE A 196 MET MODIFIED RESIDUE HET MSE A 59 8 HET MSE A 106 8 HET MSE A 196 16 HET CL A 301 1 HET CL A 302 1 HET CL A 303 1 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 CL 3(CL 1-) FORMUL 5 HOH *168(H2 O) HELIX 1 AA1 SER A 52 MSE A 59 1 8 HELIX 2 AA2 MSE A 59 TYR A 68 1 10 HELIX 3 AA3 GLN A 82 GLU A 92 1 11 HELIX 4 AA4 ASN A 129 LEU A 133 5 5 HELIX 5 AA5 SER A 164 SER A 173 1 10 HELIX 6 AA6 ALA A 183 GLU A 188 1 6 HELIX 7 AA7 LYS A 215 LEU A 223 1 9 SHEET 1 AA1 7 PHE A 76 ILE A 80 0 SHEET 2 AA1 7 PHE A 47 ALA A 51 1 N ILE A 49 O ARG A 79 SHEET 3 AA1 7 LEU A 97 THR A 100 1 O LEU A 97 N GLY A 50 SHEET 4 AA1 7 LEU A 201 LEU A 210 -1 O TYR A 206 N THR A 100 SHEET 5 AA1 7 LEU A 109 CYS A 123 -1 N LEU A 114 O LEU A 205 SHEET 6 AA1 7 GLY A 177 PRO A 182 -1 O LEU A 181 N ALA A 120 SHEET 7 AA1 7 ASN A 134 TYR A 135 1 N ASN A 134 O CYS A 178 SHEET 1 AA2 6 PHE A 76 ILE A 80 0 SHEET 2 AA2 6 PHE A 47 ALA A 51 1 N ILE A 49 O ARG A 79 SHEET 3 AA2 6 LEU A 97 THR A 100 1 O LEU A 97 N GLY A 50 SHEET 4 AA2 6 LEU A 201 LEU A 210 -1 O TYR A 206 N THR A 100 SHEET 5 AA2 6 LEU A 109 CYS A 123 -1 N LEU A 114 O LEU A 205 SHEET 6 AA2 6 HIS A 193 THR A 194 -1 O HIS A 193 N CYS A 123 SHEET 1 AA3 2 ARG A 137 LEU A 138 0 SHEET 2 AA3 2 THR A 161 THR A 162 1 O THR A 162 N ARG A 137 LINK C CYS A 58 N MSE A 59 1555 1555 1.34 LINK C MSE A 59 N LEU A 60 1555 1555 1.33 LINK C LYS A 105 N MSE A 106 1555 1555 1.34 LINK C MSE A 106 N ASP A 107 1555 1555 1.33 LINK C VAL A 195 N AMSE A 196 1555 1555 1.34 LINK C VAL A 195 N BMSE A 196 1555 1555 1.33 LINK C AMSE A 196 N ASP A 197 1555 1555 1.34 LINK C BMSE A 196 N ASP A 197 1555 1555 1.34 SITE 1 AC1 3 ALA A 81 GLN A 82 SER A 85 SITE 1 AC2 6 ALA A 51 SER A 52 LEU A 55 ILE A 99 SITE 2 AC2 6 CL A 303 HOH A 458 SITE 1 AC3 4 THR A 100 THR A 101 CL A 302 HOH A 541 CRYST1 62.389 62.389 103.132 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016028 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016028 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009696 0.00000