HEADER TRANSFERASE/DNA 27-APR-20 6WPF TITLE STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH DSDNA TITLE 2 AND D4T COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA PRIMER 21-MER; COMPND 3 CHAIN: P; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA TEMPLATE 27-MER; COMPND 7 CHAIN: T; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: REVERSE TRANSCRIPTASE/RIBONUCLEASE H; COMPND 11 CHAIN: A; COMPND 12 SYNONYM: PR160GAG-POL; COMPND 13 EC: 2.7.7.49, 2.7.7.7, 3.1.26.13; COMPND 14 ENGINEERED: YES; COMPND 15 MUTATION: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: P51 RT; COMPND 18 CHAIN: B; COMPND 19 EC: 2.7.7.-,3.1.-.-; COMPND 20 ENGINEERED: YES; COMPND 21 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 8 ORGANISM_TAXID: 32630; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 GROUP M SOURCE 11 SUBTYPE B (ISOLATE HXB2); SOURCE 12 ORGANISM_COMMON: HIV-1; SOURCE 13 ORGANISM_TAXID: 11706; SOURCE 14 STRAIN: ISOLATE HXB2; SOURCE 15 GENE: GAG-POL; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 18 MOL_ID: 4; SOURCE 19 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 GROUP M SOURCE 20 SUBTYPE B (ISOLATE HXB2); SOURCE 21 ORGANISM_COMMON: HIV-1; SOURCE 22 ORGANISM_TAXID: 11706; SOURCE 23 STRAIN: ISOLATE HXB2; SOURCE 24 GENE: GAG-POL; SOURCE 25 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS REVERSE TRANSCRIPTASE, TERNARY COMPLEX, D4T, CHAIN TERMINATOR, KEYWDS 2 STEREOCHEMISTRY, TRANSFERASE, TRANSFERASE-DNA COMPLEX, STAVUDINE EXPDTA X-RAY DIFFRACTION AUTHOR N.BERTOLETTI,K.S.ANDERSON REVDAT 2 18-OCT-23 6WPF 1 REMARK REVDAT 1 04-NOV-20 6WPF 0 JRNL AUTH N.BERTOLETTI,A.H.CHAN,R.F.SCHINAZI,K.S.ANDERSON JRNL TITL POST-CATALYTIC COMPLEXES WITH EMTRICITABINE OR STAVUDINE AND JRNL TITL 2 HIV-1 REVERSE TRANSCRIPTASE REVEAL NEW MECHANISTIC INSIGHTS JRNL TITL 3 FOR NUCLEOTIDE INCORPORATION AND DRUG RESISTANCE. JRNL REF MOLECULES V. 25 2020 JRNL REFN ESSN 1420-3049 JRNL PMID 33096918 JRNL DOI 10.3390/MOLECULES25204868 REMARK 2 REMARK 2 RESOLUTION. 2.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 47959 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2398 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.6800 - 6.5000 1.00 2902 152 0.1567 0.1848 REMARK 3 2 6.5000 - 5.1600 1.00 2791 147 0.1640 0.2087 REMARK 3 3 5.1600 - 4.5100 1.00 2766 146 0.1380 0.1725 REMARK 3 4 4.5100 - 4.1000 1.00 2754 145 0.1417 0.1869 REMARK 3 5 4.1000 - 3.8100 1.00 2747 144 0.1512 0.1976 REMARK 3 6 3.8100 - 3.5800 1.00 2728 144 0.1709 0.2148 REMARK 3 7 3.5800 - 3.4000 1.00 2720 143 0.1775 0.2342 REMARK 3 8 3.4000 - 3.2500 1.00 2743 144 0.1931 0.2825 REMARK 3 9 3.2500 - 3.1300 1.00 2693 142 0.2146 0.2431 REMARK 3 10 3.1300 - 3.0200 1.00 2725 143 0.2289 0.2708 REMARK 3 11 3.0200 - 2.9300 1.00 2730 144 0.2222 0.3110 REMARK 3 12 2.9300 - 2.8400 1.00 2704 143 0.2395 0.3092 REMARK 3 13 2.8400 - 2.7700 1.00 2688 141 0.2416 0.2902 REMARK 3 14 2.7700 - 2.7000 1.00 2726 143 0.2538 0.3889 REMARK 3 15 2.7000 - 2.6400 1.00 2705 143 0.2670 0.3196 REMARK 3 16 2.6400 - 2.5800 1.00 2683 141 0.2884 0.3561 REMARK 3 17 2.5800 - 2.5300 0.65 1756 93 0.3059 0.3580 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.369 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.434 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.19 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 8762 REMARK 3 ANGLE : 0.907 12117 REMARK 3 CHIRALITY : 0.049 1336 REMARK 3 PLANARITY : 0.005 1378 REMARK 3 DIHEDRAL : 18.167 5057 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 24 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:62) REMARK 3 ORIGIN FOR THE GROUP (A): 31.6335 -9.8837 -28.9694 REMARK 3 T TENSOR REMARK 3 T11: 0.7101 T22: 0.5016 REMARK 3 T33: 0.5263 T12: -0.1568 REMARK 3 T13: -0.1551 T23: -0.0420 REMARK 3 L TENSOR REMARK 3 L11: 2.0571 L22: 3.1411 REMARK 3 L33: 2.9630 L12: 0.0121 REMARK 3 L13: 0.1728 L23: -0.2403 REMARK 3 S TENSOR REMARK 3 S11: -0.0312 S12: 0.6323 S13: -0.3226 REMARK 3 S21: -0.9969 S22: 0.1126 S23: 0.4472 REMARK 3 S31: 0.7555 S32: -0.3040 S33: -0.0745 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 63:79) REMARK 3 ORIGIN FOR THE GROUP (A): 40.9078 -2.7038 -33.1529 REMARK 3 T TENSOR REMARK 3 T11: 0.7996 T22: 0.4722 REMARK 3 T33: 0.4006 T12: -0.1091 REMARK 3 T13: -0.0668 T23: -0.0611 REMARK 3 L TENSOR REMARK 3 L11: 4.8344 L22: 6.1055 REMARK 3 L33: 3.1003 L12: -0.5709 REMARK 3 L13: -0.3355 L23: 0.5983 REMARK 3 S TENSOR REMARK 3 S11: 0.2773 S12: 0.6155 S13: 0.0802 REMARK 3 S21: -1.2680 S22: -0.0080 S23: -0.4478 REMARK 3 S31: 0.5024 S32: -0.0516 S33: -0.2761 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 80:125) REMARK 3 ORIGIN FOR THE GROUP (A): 38.2151 5.6247 -19.3271 REMARK 3 T TENSOR REMARK 3 T11: 0.2399 T22: 0.2931 REMARK 3 T33: 0.1916 T12: -0.0320 REMARK 3 T13: -0.0768 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 1.8486 L22: 2.9072 REMARK 3 L33: 0.7525 L12: 0.0292 REMARK 3 L13: 0.2342 L23: -0.3918 REMARK 3 S TENSOR REMARK 3 S11: 0.0358 S12: -0.0154 S13: -0.0670 REMARK 3 S21: -0.2118 S22: 0.0220 S23: 0.3419 REMARK 3 S31: 0.0420 S32: -0.1945 S33: -0.0518 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 126:142) REMARK 3 ORIGIN FOR THE GROUP (A): 30.4827 -14.9283 -33.9133 REMARK 3 T TENSOR REMARK 3 T11: 1.0416 T22: 0.5170 REMARK 3 T33: 0.5065 T12: -0.1548 REMARK 3 T13: -0.2373 T23: 0.0347 REMARK 3 L TENSOR REMARK 3 L11: 5.2031 L22: 8.0508 REMARK 3 L33: 4.7293 L12: -3.1732 REMARK 3 L13: -3.3024 L23: 4.5122 REMARK 3 S TENSOR REMARK 3 S11: -0.0130 S12: 0.2543 S13: -0.1327 REMARK 3 S21: -1.3168 S22: -0.0866 S23: 0.2995 REMARK 3 S31: 0.4431 S32: 0.0147 S33: 0.0058 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 143:277) REMARK 3 ORIGIN FOR THE GROUP (A): 48.4162 9.1300 -21.1817 REMARK 3 T TENSOR REMARK 3 T11: 0.2824 T22: 0.3110 REMARK 3 T33: 0.2587 T12: 0.0071 REMARK 3 T13: 0.0095 T23: -0.0243 REMARK 3 L TENSOR REMARK 3 L11: 0.6401 L22: 3.5125 REMARK 3 L33: 0.9784 L12: 0.0226 REMARK 3 L13: -0.4738 L23: -0.8549 REMARK 3 S TENSOR REMARK 3 S11: -0.0170 S12: 0.0690 S13: 0.0502 REMARK 3 S21: -0.4883 S22: 0.0496 S23: -0.2273 REMARK 3 S31: 0.1904 S32: 0.0282 S33: -0.0439 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 278:387) REMARK 3 ORIGIN FOR THE GROUP (A): 47.3539 32.1670 -30.8758 REMARK 3 T TENSOR REMARK 3 T11: 0.3507 T22: 0.3509 REMARK 3 T33: 0.3558 T12: -0.0325 REMARK 3 T13: 0.0823 T23: 0.0527 REMARK 3 L TENSOR REMARK 3 L11: 1.1114 L22: 4.3065 REMARK 3 L33: 0.2379 L12: -0.2808 REMARK 3 L13: -0.1710 L23: -0.6851 REMARK 3 S TENSOR REMARK 3 S11: 0.0304 S12: 0.2586 S13: 0.1560 REMARK 3 S21: -0.7531 S22: -0.1090 S23: -0.5184 REMARK 3 S31: 0.0689 S32: 0.0830 S33: -0.0214 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 388:448) REMARK 3 ORIGIN FOR THE GROUP (A): 37.3722 53.1455 -28.5740 REMARK 3 T TENSOR REMARK 3 T11: 0.2725 T22: 0.3180 REMARK 3 T33: 0.4446 T12: -0.0721 REMARK 3 T13: 0.0633 T23: 0.0434 REMARK 3 L TENSOR REMARK 3 L11: 1.1891 L22: 2.3968 REMARK 3 L33: 1.2690 L12: -1.2176 REMARK 3 L13: 1.0900 L23: -0.8056 REMARK 3 S TENSOR REMARK 3 S11: -0.1095 S12: -0.0711 S13: 0.3246 REMARK 3 S21: 0.2364 S22: -0.1031 S23: -0.6381 REMARK 3 S31: -0.0412 S32: -0.0672 S33: 0.1984 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 449:555) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1039 58.1106 -43.8793 REMARK 3 T TENSOR REMARK 3 T11: 0.2187 T22: 0.2683 REMARK 3 T33: 0.2809 T12: -0.0247 REMARK 3 T13: 0.0606 T23: 0.0530 REMARK 3 L TENSOR REMARK 3 L11: 1.6744 L22: 3.2232 REMARK 3 L33: 2.4062 L12: -0.1209 REMARK 3 L13: 0.2339 L23: -0.2212 REMARK 3 S TENSOR REMARK 3 S11: 0.0527 S12: 0.1334 S13: 0.0820 REMARK 3 S21: -0.1348 S22: -0.0516 S23: -0.0088 REMARK 3 S31: 0.0933 S32: -0.0950 S33: 0.0106 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 6:16) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5745 15.7011 -9.3423 REMARK 3 T TENSOR REMARK 3 T11: 0.4374 T22: 0.6687 REMARK 3 T33: 1.0478 T12: -0.0429 REMARK 3 T13: 0.0958 T23: 0.1345 REMARK 3 L TENSOR REMARK 3 L11: 2.8653 L22: 3.7136 REMARK 3 L33: 0.9949 L12: -1.3979 REMARK 3 L13: -0.3986 L23: 1.7379 REMARK 3 S TENSOR REMARK 3 S11: -0.1793 S12: 0.3845 S13: -0.9721 REMARK 3 S21: 0.0301 S22: -0.5618 S23: 1.2810 REMARK 3 S31: 0.4364 S32: -0.0710 S33: 0.5552 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 17:82) REMARK 3 ORIGIN FOR THE GROUP (A): 28.9075 21.6079 -6.6624 REMARK 3 T TENSOR REMARK 3 T11: 0.2955 T22: 0.3534 REMARK 3 T33: 0.2575 T12: 0.0478 REMARK 3 T13: 0.0569 T23: 0.0496 REMARK 3 L TENSOR REMARK 3 L11: 3.4335 L22: 5.4026 REMARK 3 L33: 2.4492 L12: -1.6936 REMARK 3 L13: 1.0995 L23: 0.4500 REMARK 3 S TENSOR REMARK 3 S11: -0.1428 S12: -0.1412 S13: -0.0466 REMARK 3 S21: 0.7914 S22: 0.3004 S23: 0.2466 REMARK 3 S31: 0.0300 S32: 0.0610 S33: -0.1097 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN B AND RESID 83:86) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8725 21.9610 -12.2308 REMARK 3 T TENSOR REMARK 3 T11: 0.2739 T22: 0.8122 REMARK 3 T33: 0.8607 T12: 0.0793 REMARK 3 T13: -0.0493 T23: 0.0564 REMARK 3 L TENSOR REMARK 3 L11: 1.6737 L22: 6.2072 REMARK 3 L33: 4.3027 L12: 2.7797 REMARK 3 L13: -0.9983 L23: -4.0798 REMARK 3 S TENSOR REMARK 3 S11: 0.1220 S12: 0.4358 S13: 0.5054 REMARK 3 S21: -0.2338 S22: -0.7696 S23: 0.6873 REMARK 3 S31: -0.5614 S32: -0.8727 S33: 0.4573 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN B AND RESID 96:153) REMARK 3 ORIGIN FOR THE GROUP (A): 21.6218 22.5236 -2.7297 REMARK 3 T TENSOR REMARK 3 T11: 0.5237 T22: 0.5181 REMARK 3 T33: 0.4153 T12: 0.0810 REMARK 3 T13: 0.1197 T23: 0.1709 REMARK 3 L TENSOR REMARK 3 L11: 1.3545 L22: 1.3383 REMARK 3 L33: 1.0871 L12: -1.1759 REMARK 3 L13: -0.6868 L23: 0.9044 REMARK 3 S TENSOR REMARK 3 S11: -0.0679 S12: -0.2849 S13: -0.2557 REMARK 3 S21: 0.5381 S22: 0.1219 S23: 0.2066 REMARK 3 S31: -0.2043 S32: -0.3147 S33: 0.0103 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN B AND RESID 154:204) REMARK 3 ORIGIN FOR THE GROUP (A): 12.2985 34.5385 10.1201 REMARK 3 T TENSOR REMARK 3 T11: 0.7769 T22: 0.6900 REMARK 3 T33: 0.5120 T12: 0.0630 REMARK 3 T13: 0.2758 T23: 0.1453 REMARK 3 L TENSOR REMARK 3 L11: 3.1278 L22: 3.9101 REMARK 3 L33: 3.1370 L12: 1.1593 REMARK 3 L13: 0.5893 L23: 1.4989 REMARK 3 S TENSOR REMARK 3 S11: 0.0639 S12: -0.7461 S13: -0.0301 REMARK 3 S21: 0.7849 S22: -0.4298 S23: 0.3887 REMARK 3 S31: -0.3743 S32: -0.2643 S33: 0.3547 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN B AND RESID 205:240) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0987 39.6582 9.6770 REMARK 3 T TENSOR REMARK 3 T11: 0.9307 T22: 0.6632 REMARK 3 T33: 0.3907 T12: 0.0539 REMARK 3 T13: 0.1797 T23: 0.1048 REMARK 3 L TENSOR REMARK 3 L11: 5.2174 L22: 4.9895 REMARK 3 L33: 8.0638 L12: 1.9820 REMARK 3 L13: -0.4626 L23: -4.2262 REMARK 3 S TENSOR REMARK 3 S11: 0.4431 S12: -0.7672 S13: 0.6906 REMARK 3 S21: 0.8150 S22: 0.8543 S23: 0.6595 REMARK 3 S31: -1.5198 S32: 0.4666 S33: -0.9458 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN B AND RESID 241:324) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5113 65.4441 -23.3269 REMARK 3 T TENSOR REMARK 3 T11: 0.2885 T22: 0.4161 REMARK 3 T33: 0.3848 T12: 0.0001 REMARK 3 T13: 0.0817 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 2.3400 L22: 6.3398 REMARK 3 L33: 2.0554 L12: 2.1617 REMARK 3 L13: -1.1781 L23: -2.4099 REMARK 3 S TENSOR REMARK 3 S11: 0.2123 S12: -0.3726 S13: 0.0579 REMARK 3 S21: 0.4391 S22: -0.1475 S23: 0.4827 REMARK 3 S31: -0.1480 S32: -0.0738 S33: -0.1271 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN B AND RESID 325:429) REMARK 3 ORIGIN FOR THE GROUP (A): 21.8955 44.4136 -13.8903 REMARK 3 T TENSOR REMARK 3 T11: 0.2726 T22: 0.2727 REMARK 3 T33: 0.2256 T12: 0.0144 REMARK 3 T13: 0.0260 T23: -0.0298 REMARK 3 L TENSOR REMARK 3 L11: 6.2570 L22: 3.8420 REMARK 3 L33: 2.3335 L12: -1.4498 REMARK 3 L13: -0.0503 L23: -1.1165 REMARK 3 S TENSOR REMARK 3 S11: -0.1171 S12: -0.0681 S13: 0.1532 REMARK 3 S21: 0.3671 S22: 0.1204 S23: -0.1126 REMARK 3 S31: -0.0182 S32: 0.0247 S33: -0.0150 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: (CHAIN P AND RESID 805:808) REMARK 3 ORIGIN FOR THE GROUP (A): 9.2278 40.4653 -42.0955 REMARK 3 T TENSOR REMARK 3 T11: 0.4540 T22: 0.5958 REMARK 3 T33: 0.9465 T12: -0.0995 REMARK 3 T13: 0.0783 T23: -0.0589 REMARK 3 L TENSOR REMARK 3 L11: 4.1012 L22: 3.8457 REMARK 3 L33: 6.0955 L12: 0.9172 REMARK 3 L13: -4.9429 L23: -1.2054 REMARK 3 S TENSOR REMARK 3 S11: -1.1584 S12: 1.8612 S13: 0.1130 REMARK 3 S21: -0.3940 S22: 0.6350 S23: 0.9117 REMARK 3 S31: 0.2401 S32: -1.4342 S33: 0.5045 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: (CHAIN P AND RESID 809:812) REMARK 3 ORIGIN FOR THE GROUP (A): 22.9559 37.9861 -35.7029 REMARK 3 T TENSOR REMARK 3 T11: 0.5377 T22: 0.5274 REMARK 3 T33: 0.5835 T12: 0.1330 REMARK 3 T13: -0.0067 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 0.1274 L22: 4.9506 REMARK 3 L33: 3.6950 L12: -0.7511 REMARK 3 L13: 0.6423 L23: -4.1718 REMARK 3 S TENSOR REMARK 3 S11: 0.0473 S12: -0.0283 S13: 0.1647 REMARK 3 S21: 0.3913 S22: 0.7382 S23: 0.2007 REMARK 3 S31: -0.2316 S32: -0.0707 S33: -0.7146 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: (CHAIN P AND RESID 813:816) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6388 22.0761 -33.7697 REMARK 3 T TENSOR REMARK 3 T11: 1.0476 T22: 0.4702 REMARK 3 T33: 0.7866 T12: 0.2197 REMARK 3 T13: -0.0665 T23: 0.1006 REMARK 3 L TENSOR REMARK 3 L11: 8.4973 L22: 4.3018 REMARK 3 L33: 5.8885 L12: 2.5420 REMARK 3 L13: 0.7369 L23: -2.0760 REMARK 3 S TENSOR REMARK 3 S11: 0.3134 S12: -0.1276 S13: -1.4982 REMARK 3 S21: 1.1107 S22: -0.1206 S23: -0.5658 REMARK 3 S31: 1.3961 S32: -0.6969 S33: -0.3381 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: (CHAIN P AND RESID 818:821) REMARK 3 ORIGIN FOR THE GROUP (A): 43.3315 14.6113 -34.2054 REMARK 3 T TENSOR REMARK 3 T11: 0.6384 T22: 0.3273 REMARK 3 T33: 0.3558 T12: 0.0788 REMARK 3 T13: 0.0198 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 6.6724 L22: 7.8134 REMARK 3 L33: 6.6495 L12: -2.9457 REMARK 3 L13: -0.1700 L23: -2.9878 REMARK 3 S TENSOR REMARK 3 S11: 0.8661 S12: 0.1712 S13: -0.1550 REMARK 3 S21: -1.6359 S22: 0.0730 S23: 0.3978 REMARK 3 S31: -0.1361 S32: -0.3004 S33: -0.8302 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: (CHAIN T AND RESID 704:707) REMARK 3 ORIGIN FOR THE GROUP (A): 35.4988 4.5448 -33.7616 REMARK 3 T TENSOR REMARK 3 T11: 0.8468 T22: 0.5302 REMARK 3 T33: 0.5354 T12: -0.1464 REMARK 3 T13: -0.0272 T23: 0.0336 REMARK 3 L TENSOR REMARK 3 L11: 4.2754 L22: 8.1325 REMARK 3 L33: 3.4847 L12: 5.6097 REMARK 3 L13: 3.8071 L23: 4.6760 REMARK 3 S TENSOR REMARK 3 S11: -0.9055 S12: 0.9120 S13: -0.6502 REMARK 3 S21: -2.4741 S22: 0.6130 S23: -0.5808 REMARK 3 S31: 0.0739 S32: -0.1223 S33: -0.1084 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: (CHAIN T AND RESID 708:711) REMARK 3 ORIGIN FOR THE GROUP (A): 37.7906 19.4382 -28.6074 REMARK 3 T TENSOR REMARK 3 T11: 0.6075 T22: 0.3479 REMARK 3 T33: 0.3242 T12: 0.0130 REMARK 3 T13: -0.1531 T23: 0.0190 REMARK 3 L TENSOR REMARK 3 L11: 3.4887 L22: 1.6093 REMARK 3 L33: 0.3246 L12: 2.3772 REMARK 3 L13: -0.8763 L23: -0.6758 REMARK 3 S TENSOR REMARK 3 S11: -0.1051 S12: -0.0203 S13: 0.3820 REMARK 3 S21: -0.5808 S22: 0.0188 S23: 0.5698 REMARK 3 S31: 0.2683 S32: -0.1659 S33: 0.2105 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: (CHAIN T AND RESID 712:721) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4015 32.3939 -36.5644 REMARK 3 T TENSOR REMARK 3 T11: 0.7268 T22: 0.4450 REMARK 3 T33: 0.5163 T12: 0.0531 REMARK 3 T13: -0.0545 T23: 0.1670 REMARK 3 L TENSOR REMARK 3 L11: 9.8676 L22: 8.4182 REMARK 3 L33: 2.9331 L12: -4.6311 REMARK 3 L13: 2.2295 L23: 1.1405 REMARK 3 S TENSOR REMARK 3 S11: 0.3034 S12: 0.4174 S13: -0.9239 REMARK 3 S21: 0.3296 S22: -0.3639 S23: 1.4974 REMARK 3 S31: 0.8257 S32: -0.3411 S33: -0.0330 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: (CHAIN T AND RESID 722:725) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8042 50.1322 -42.6052 REMARK 3 T TENSOR REMARK 3 T11: 0.5332 T22: 0.8256 REMARK 3 T33: 0.9926 T12: 0.1519 REMARK 3 T13: -0.0205 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 4.5011 L22: 7.2227 REMARK 3 L33: 8.3639 L12: 0.2508 REMARK 3 L13: 5.7226 L23: -2.0856 REMARK 3 S TENSOR REMARK 3 S11: -1.6691 S12: 0.2348 S13: 0.8701 REMARK 3 S21: 0.2335 S22: 0.6334 S23: -1.3694 REMARK 3 S31: -1.6626 S32: -0.3105 S33: 0.9055 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WPF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1000248728. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47964 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.530 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 7.230 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.14700 REMARK 200 FOR THE DATA SET : 13.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.78 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.98900 REMARK 200 FOR SHELL : 2.130 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6OR7 REMARK 200 REMARK 200 REMARK: THIN PLATE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6-10% (W/V) PEG 8000, 15 MM MAGNESIUM REMARK 280 SULFATE, AND 50 MM MES ADJUSTED AT PH 6.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.67150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.67150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 82.78450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 85.23400 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 82.78450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 85.23400 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 51.67150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 82.78450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 85.23400 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 51.67150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 82.78450 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 85.23400 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -155.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: P, T, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 784 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DA P 802 REMARK 465 DC P 803 REMARK 465 DA P 804 REMARK 465 DA T 701 REMARK 465 DT T 702 REMARK 465 DT T 726 REMARK 465 DG T 727 REMARK 465 MET A 0 REMARK 465 ASN A 137 REMARK 465 GLU A 138 REMARK 465 LYS A 558 REMARK 465 VAL A 559 REMARK 465 LEU A 560 REMARK 465 MET B -11 REMARK 465 GLY B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 SER B -1 REMARK 465 SER B 0 REMARK 465 PRO B 1 REMARK 465 ILE B 2 REMARK 465 SER B 3 REMARK 465 PRO B 4 REMARK 465 ILE B 5 REMARK 465 PHE B 87 REMARK 465 TRP B 88 REMARK 465 GLU B 89 REMARK 465 VAL B 90 REMARK 465 GLN B 91 REMARK 465 LEU B 92 REMARK 465 GLY B 93 REMARK 465 ILE B 94 REMARK 465 PRO B 95 REMARK 465 TRP B 212 REMARK 465 GLY B 213 REMARK 465 LEU B 214 REMARK 465 THR B 215 REMARK 465 THR B 216 REMARK 465 PRO B 217 REMARK 465 ASP B 218 REMARK 465 LYS B 219 REMARK 465 LYS B 220 REMARK 465 HIS B 221 REMARK 465 GLN B 222 REMARK 465 LYS B 223 REMARK 465 GLU B 224 REMARK 465 PRO B 225 REMARK 465 PRO B 226 REMARK 465 PHE B 227 REMARK 465 LEU B 228 REMARK 465 TRP B 229 REMARK 465 MET B 230 REMARK 465 GLY B 231 REMARK 465 TYR B 232 REMARK 465 GLU B 430 REMARK 465 LYS B 431 REMARK 465 GLU B 432 REMARK 465 PRO B 433 REMARK 465 ILE B 434 REMARK 465 VAL B 435 REMARK 465 GLY B 436 REMARK 465 ALA B 437 REMARK 465 GLU B 438 REMARK 465 THR B 439 REMARK 465 PHE B 440 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DG P 805 P OP1 OP2 REMARK 470 GLU A 6 CG CD OE1 OE2 REMARK 470 LYS A 11 CG CD CE NZ REMARK 470 LYS A 22 CG CD CE NZ REMARK 470 LEU A 26 CG CD1 CD2 REMARK 470 LYS A 32 CG CD CE NZ REMARK 470 SER A 68 OG REMARK 470 THR A 69 OG1 CG2 REMARK 470 LYS A 102 CG CD CE NZ REMARK 470 SER A 134 OG REMARK 470 ILE A 135 CG1 CG2 CD1 REMARK 470 ASN A 136 CG OD1 ND2 REMARK 470 THR A 139 OG1 CG2 REMARK 470 LYS A 249 CG CD CE NZ REMARK 470 ARG A 284 CG CD NE CZ NH1 NH2 REMARK 470 THR A 286 OG1 CG2 REMARK 470 LYS A 287 CG CD CE NZ REMARK 470 GLU A 291 CG CD OE1 OE2 REMARK 470 ILE A 293 CG1 CG2 CD1 REMARK 470 GLU A 305 CG CD OE1 OE2 REMARK 470 GLU A 344 CG CD OE1 OE2 REMARK 470 LYS A 353 CE NZ REMARK 470 LYS A 374 CE NZ REMARK 470 GLU A 396 CG CD OE1 OE2 REMARK 470 GLU A 404 CG CD OE1 OE2 REMARK 470 GLU A 449 CG CD OE1 OE2 REMARK 470 GLU A 516 CG CD OE1 OE2 REMARK 470 ILE A 556 CG1 CG2 CD1 REMARK 470 GLU B 6 CG CD OE1 OE2 REMARK 470 LYS B 11 CG CD CE NZ REMARK 470 GLU B 40 CG CD OE1 OE2 REMARK 470 LYS B 43 CG CD CE NZ REMARK 470 LYS B 46 CE NZ REMARK 470 LYS B 66 CG CD CE NZ REMARK 470 ASP B 67 CG OD1 OD2 REMARK 470 SER B 68 OG REMARK 470 LYS B 70 CG CD CE NZ REMARK 470 GLN B 85 CG CD OE1 NE2 REMARK 470 LYS B 103 CE NZ REMARK 470 LYS B 104 CG CD CE NZ REMARK 470 GLU B 122 CG CD OE1 OE2 REMARK 470 LYS B 166 CG CD CE NZ REMARK 470 GLU B 169 CG CD OE1 OE2 REMARK 470 LYS B 173 CG CD CE NZ REMARK 470 GLN B 174 CG CD OE1 NE2 REMARK 470 GLU B 194 CG CD OE1 OE2 REMARK 470 GLN B 197 CG CD OE1 NE2 REMARK 470 ARG B 199 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 201 CE NZ REMARK 470 GLU B 233 CG CD OE1 OE2 REMARK 470 LYS B 238 CG CD CE NZ REMARK 470 LYS B 275 CG CD CE NZ REMARK 470 GLU B 297 CG CD OE1 OE2 REMARK 470 LEU B 301 CG CD1 CD2 REMARK 470 GLU B 308 CG CD OE1 OE2 REMARK 470 GLN B 334 CG CD OE1 NE2 REMARK 470 LYS B 347 CG CD CE NZ REMARK 470 ARG B 356 CG CD NE CZ NH1 NH2 REMARK 470 MET B 357 CG SD CE REMARK 470 ARG B 358 CG CD NE CZ NH1 NH2 REMARK 470 HIS B 361 CG ND1 CD2 CE1 NE2 REMARK 470 THR B 419 OG1 CG2 REMARK 470 LYS B 424 CG CD CE NZ REMARK 470 GLN B 428 CG CD OE1 NE2 REMARK 470 LEU B 429 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC P 821 O3' DC P 821 C3' -0.046 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT P 810 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC P 818 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DG P 822 O4' - C1' - N9 ANGL. DEV. = 2.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 67 98.98 -68.98 REMARK 500 PHE A 116 0.95 -68.80 REMARK 500 MET A 184 -56.96 64.70 REMARK 500 ASP A 185 2.25 -156.00 REMARK 500 LYS A 287 -61.08 -91.13 REMARK 500 ALA A 355 26.70 -141.83 REMARK 500 ASP B 67 14.82 56.13 REMARK 500 MET B 184 -60.94 -27.94 REMARK 500 PHE B 346 -0.89 77.88 REMARK 500 LYS B 347 65.17 -101.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR B 183 MET B 184 -130.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG P 903 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG P 822 O3' REMARK 620 2 D4M P 901 OP1 64.5 REMARK 620 3 ASP A 110 OD1 114.2 85.0 REMARK 620 4 ASP A 110 OD2 148.6 85.6 50.3 REMARK 620 5 ASP A 185 OD1 99.0 163.5 101.5 110.3 REMARK 620 6 D4T A 603 O2A 110.8 87.4 125.1 75.0 100.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 110 OD2 REMARK 620 2 VAL A 111 O 97.7 REMARK 620 3 ASP A 185 OD2 96.8 95.3 REMARK 620 4 D4T A 603 O2C 87.2 101.9 161.6 REMARK 620 5 D4T A 603 O2A 91.7 170.5 82.5 79.4 REMARK 620 6 D4T A 603 O2B 168.0 94.2 83.0 89.3 76.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 443 OD1 REMARK 620 2 GLU A 478 OE2 89.4 REMARK 620 3 ASP A 498 OD1 98.6 88.2 REMARK 620 4 ASP A 498 OD2 92.6 143.4 55.4 REMARK 620 5 HOH A 709 O 89.8 153.8 117.8 62.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D4M P 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 P 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG P 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 T 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D4T A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 501 DBREF 6WPF P 802 822 PDB 6WPF 6WPF 802 822 DBREF 6WPF T 701 727 PDB 6WPF 6WPF 701 727 DBREF 6WPF A 1 560 UNP P04585 POL_HV1H2 588 1147 DBREF 6WPF B 1 440 UNP P04585 POL_HV1H2 588 1027 SEQADV 6WPF MET A 0 UNP P04585 EXPRESSION TAG SEQADV 6WPF CYS A 258 UNP P04585 GLN 845 ENGINEERED MUTATION SEQADV 6WPF SER A 280 UNP P04585 CYS 867 ENGINEERED MUTATION SEQADV 6WPF MET B -11 UNP P04585 EXPRESSION TAG SEQADV 6WPF GLY B -10 UNP P04585 EXPRESSION TAG SEQADV 6WPF SER B -9 UNP P04585 EXPRESSION TAG SEQADV 6WPF SER B -8 UNP P04585 EXPRESSION TAG SEQADV 6WPF HIS B -7 UNP P04585 EXPRESSION TAG SEQADV 6WPF HIS B -6 UNP P04585 EXPRESSION TAG SEQADV 6WPF HIS B -5 UNP P04585 EXPRESSION TAG SEQADV 6WPF HIS B -4 UNP P04585 EXPRESSION TAG SEQADV 6WPF HIS B -3 UNP P04585 EXPRESSION TAG SEQADV 6WPF HIS B -2 UNP P04585 EXPRESSION TAG SEQADV 6WPF SER B -1 UNP P04585 EXPRESSION TAG SEQADV 6WPF SER B 0 UNP P04585 EXPRESSION TAG SEQADV 6WPF SER B 280 UNP P04585 CYS 867 ENGINEERED MUTATION SEQRES 1 P 21 DA DC DA DG DT DC DC DC DT DG DT DT DC SEQRES 2 P 21 DG DG G47 DC DG DC DC DG SEQRES 1 T 27 DA DT DG DG DA DC DG DG DC DG DC DC DC SEQRES 2 T 27 DG DA DA DC DA DG DG DG DA DC DT DG DT SEQRES 3 T 27 DG SEQRES 1 A 561 MET PRO ILE SER PRO ILE GLU THR VAL PRO VAL LYS LEU SEQRES 2 A 561 LYS PRO GLY MET ASP GLY PRO LYS VAL LYS GLN TRP PRO SEQRES 3 A 561 LEU THR GLU GLU LYS ILE LYS ALA LEU VAL GLU ILE CYS SEQRES 4 A 561 THR GLU MET GLU LYS GLU GLY LYS ILE SER LYS ILE GLY SEQRES 5 A 561 PRO GLU ASN PRO TYR ASN THR PRO VAL PHE ALA ILE LYS SEQRES 6 A 561 LYS LYS ASP SER THR LYS TRP ARG LYS LEU VAL ASP PHE SEQRES 7 A 561 ARG GLU LEU ASN LYS ARG THR GLN ASP PHE TRP GLU VAL SEQRES 8 A 561 GLN LEU GLY ILE PRO HIS PRO ALA GLY LEU LYS LYS LYS SEQRES 9 A 561 LYS SER VAL THR VAL LEU ASP VAL GLY ASP ALA TYR PHE SEQRES 10 A 561 SER VAL PRO LEU ASP GLU ASP PHE ARG LYS TYR THR ALA SEQRES 11 A 561 PHE THR ILE PRO SER ILE ASN ASN GLU THR PRO GLY ILE SEQRES 12 A 561 ARG TYR GLN TYR ASN VAL LEU PRO GLN GLY TRP LYS GLY SEQRES 13 A 561 SER PRO ALA ILE PHE GLN SER SER MET THR LYS ILE LEU SEQRES 14 A 561 GLU PRO PHE ARG LYS GLN ASN PRO ASP ILE VAL ILE TYR SEQRES 15 A 561 GLN TYR MET ASP ASP LEU TYR VAL GLY SER ASP LEU GLU SEQRES 16 A 561 ILE GLY GLN HIS ARG THR LYS ILE GLU GLU LEU ARG GLN SEQRES 17 A 561 HIS LEU LEU ARG TRP GLY LEU THR THR PRO ASP LYS LYS SEQRES 18 A 561 HIS GLN LYS GLU PRO PRO PHE LEU TRP MET GLY TYR GLU SEQRES 19 A 561 LEU HIS PRO ASP LYS TRP THR VAL GLN PRO ILE VAL LEU SEQRES 20 A 561 PRO GLU LYS ASP SER TRP THR VAL ASN ASP ILE CYS LYS SEQRES 21 A 561 LEU VAL GLY LYS LEU ASN TRP ALA SER GLN ILE TYR PRO SEQRES 22 A 561 GLY ILE LYS VAL ARG GLN LEU SER LYS LEU LEU ARG GLY SEQRES 23 A 561 THR LYS ALA LEU THR GLU VAL ILE PRO LEU THR GLU GLU SEQRES 24 A 561 ALA GLU LEU GLU LEU ALA GLU ASN ARG GLU ILE LEU LYS SEQRES 25 A 561 GLU PRO VAL HIS GLY VAL TYR TYR ASP PRO SER LYS ASP SEQRES 26 A 561 LEU ILE ALA GLU ILE GLN LYS GLN GLY GLN GLY GLN TRP SEQRES 27 A 561 THR TYR GLN ILE TYR GLN GLU PRO PHE LYS ASN LEU LYS SEQRES 28 A 561 THR GLY LYS TYR ALA ARG MET ARG GLY ALA HIS THR ASN SEQRES 29 A 561 ASP VAL LYS GLN LEU THR GLU ALA VAL GLN LYS ILE THR SEQRES 30 A 561 THR GLU SER ILE VAL ILE TRP GLY LYS THR PRO LYS PHE SEQRES 31 A 561 LYS LEU PRO ILE GLN LYS GLU THR TRP GLU THR TRP TRP SEQRES 32 A 561 THR GLU TYR TRP GLN ALA THR TRP ILE PRO GLU TRP GLU SEQRES 33 A 561 PHE VAL ASN THR PRO PRO LEU VAL LYS LEU TRP TYR GLN SEQRES 34 A 561 LEU GLU LYS GLU PRO ILE VAL GLY ALA GLU THR PHE TYR SEQRES 35 A 561 VAL ASP GLY ALA ALA ASN ARG GLU THR LYS LEU GLY LYS SEQRES 36 A 561 ALA GLY TYR VAL THR ASN ARG GLY ARG GLN LYS VAL VAL SEQRES 37 A 561 THR LEU THR ASP THR THR ASN GLN LYS THR GLU LEU GLN SEQRES 38 A 561 ALA ILE TYR LEU ALA LEU GLN ASP SER GLY LEU GLU VAL SEQRES 39 A 561 ASN ILE VAL THR ASP SER GLN TYR ALA LEU GLY ILE ILE SEQRES 40 A 561 GLN ALA GLN PRO ASP GLN SER GLU SER GLU LEU VAL ASN SEQRES 41 A 561 GLN ILE ILE GLU GLN LEU ILE LYS LYS GLU LYS VAL TYR SEQRES 42 A 561 LEU ALA TRP VAL PRO ALA HIS LYS GLY ILE GLY GLY ASN SEQRES 43 A 561 GLU GLN VAL ASP LYS LEU VAL SER ALA GLY ILE ARG LYS SEQRES 44 A 561 VAL LEU SEQRES 1 B 452 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER PRO SEQRES 2 B 452 ILE SER PRO ILE GLU THR VAL PRO VAL LYS LEU LYS PRO SEQRES 3 B 452 GLY MET ASP GLY PRO LYS VAL LYS GLN TRP PRO LEU THR SEQRES 4 B 452 GLU GLU LYS ILE LYS ALA LEU VAL GLU ILE CYS THR GLU SEQRES 5 B 452 MET GLU LYS GLU GLY LYS ILE SER LYS ILE GLY PRO GLU SEQRES 6 B 452 ASN PRO TYR ASN THR PRO VAL PHE ALA ILE LYS LYS LYS SEQRES 7 B 452 ASP SER THR LYS TRP ARG LYS LEU VAL ASP PHE ARG GLU SEQRES 8 B 452 LEU ASN LYS ARG THR GLN ASP PHE TRP GLU VAL GLN LEU SEQRES 9 B 452 GLY ILE PRO HIS PRO ALA GLY LEU LYS LYS LYS LYS SER SEQRES 10 B 452 VAL THR VAL LEU ASP VAL GLY ASP ALA TYR PHE SER VAL SEQRES 11 B 452 PRO LEU ASP GLU ASP PHE ARG LYS TYR THR ALA PHE THR SEQRES 12 B 452 ILE PRO SER ILE ASN ASN GLU THR PRO GLY ILE ARG TYR SEQRES 13 B 452 GLN TYR ASN VAL LEU PRO GLN GLY TRP LYS GLY SER PRO SEQRES 14 B 452 ALA ILE PHE GLN SER SER MET THR LYS ILE LEU GLU PRO SEQRES 15 B 452 PHE ARG LYS GLN ASN PRO ASP ILE VAL ILE TYR GLN TYR SEQRES 16 B 452 MET ASP ASP LEU TYR VAL GLY SER ASP LEU GLU ILE GLY SEQRES 17 B 452 GLN HIS ARG THR LYS ILE GLU GLU LEU ARG GLN HIS LEU SEQRES 18 B 452 LEU ARG TRP GLY LEU THR THR PRO ASP LYS LYS HIS GLN SEQRES 19 B 452 LYS GLU PRO PRO PHE LEU TRP MET GLY TYR GLU LEU HIS SEQRES 20 B 452 PRO ASP LYS TRP THR VAL GLN PRO ILE VAL LEU PRO GLU SEQRES 21 B 452 LYS ASP SER TRP THR VAL ASN ASP ILE GLN LYS LEU VAL SEQRES 22 B 452 GLY LYS LEU ASN TRP ALA SER GLN ILE TYR PRO GLY ILE SEQRES 23 B 452 LYS VAL ARG GLN LEU SER LYS LEU LEU ARG GLY THR LYS SEQRES 24 B 452 ALA LEU THR GLU VAL ILE PRO LEU THR GLU GLU ALA GLU SEQRES 25 B 452 LEU GLU LEU ALA GLU ASN ARG GLU ILE LEU LYS GLU PRO SEQRES 26 B 452 VAL HIS GLY VAL TYR TYR ASP PRO SER LYS ASP LEU ILE SEQRES 27 B 452 ALA GLU ILE GLN LYS GLN GLY GLN GLY GLN TRP THR TYR SEQRES 28 B 452 GLN ILE TYR GLN GLU PRO PHE LYS ASN LEU LYS THR GLY SEQRES 29 B 452 LYS TYR ALA ARG MET ARG GLY ALA HIS THR ASN ASP VAL SEQRES 30 B 452 LYS GLN LEU THR GLU ALA VAL GLN LYS ILE THR THR GLU SEQRES 31 B 452 SER ILE VAL ILE TRP GLY LYS THR PRO LYS PHE LYS LEU SEQRES 32 B 452 PRO ILE GLN LYS GLU THR TRP GLU THR TRP TRP THR GLU SEQRES 33 B 452 TYR TRP GLN ALA THR TRP ILE PRO GLU TRP GLU PHE VAL SEQRES 34 B 452 ASN THR PRO PRO LEU VAL LYS LEU TRP TYR GLN LEU GLU SEQRES 35 B 452 LYS GLU PRO ILE VAL GLY ALA GLU THR PHE HET G47 P 817 25 HET D4M P 901 19 HET SO4 P 902 5 HET MG P 903 1 HET SO4 T 801 5 HET MG A 601 1 HET MG A 602 1 HET D4T A 603 28 HET SO4 A 604 5 HET SO4 A 605 5 HET GOL B 501 6 HETNAM G47 N2-ETHANETHIOL-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE HETNAM D4M [(5R)-5-(5-METHYL-2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)- HETNAM 2 D4M YL)-2,5-DIHYDROFURAN-2-YL]METHYL DIHYDROGEN PHOSPHATE HETNAM SO4 SULFATE ION HETNAM MG MAGNESIUM ION HETNAM D4T 2',3'-DEHYDRO-2',3'-DEOXY-THYMIDINE 5'-TRIPHOSPHATE HETNAM GOL GLYCEROL HETSYN D4M 2',3'-DIDEOXY-2',3-DIDEHYDROTHYMIDINE 5'-MONOPHOSPHATE; HETSYN 2 D4M 2',3'-DEHYDRO-2',3'-DEOXY-THYMIDINE 5'-MONOPHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 G47 C12 H18 N5 O7 P S FORMUL 5 D4M C10 H13 N2 O7 P FORMUL 6 SO4 4(O4 S 2-) FORMUL 7 MG 3(MG 2+) FORMUL 11 D4T C10 H15 N2 O13 P3 FORMUL 14 GOL C3 H8 O3 FORMUL 15 HOH *139(H2 O) HELIX 1 AA1 THR A 27 GLU A 44 1 18 HELIX 2 AA2 PHE A 77 THR A 84 1 8 HELIX 3 AA3 HIS A 96 LEU A 100 5 5 HELIX 4 AA4 ALA A 114 VAL A 118 5 5 HELIX 5 AA5 ASP A 121 LYS A 126 1 6 HELIX 6 AA6 TYR A 127 ALA A 129 5 3 HELIX 7 AA7 GLY A 155 ASN A 175 1 21 HELIX 8 AA8 GLU A 194 TRP A 212 1 19 HELIX 9 AA9 PRO A 217 HIS A 221 5 5 HELIX 10 AB1 VAL A 254 SER A 268 1 15 HELIX 11 AB2 VAL A 276 LEU A 282 1 7 HELIX 12 AB3 THR A 296 LYS A 311 1 16 HELIX 13 AB4 ASN A 363 GLY A 384 1 22 HELIX 14 AB5 GLN A 394 TYR A 405 1 12 HELIX 15 AB6 THR A 473 ASP A 488 1 16 HELIX 16 AB7 SER A 499 ALA A 508 1 10 HELIX 17 AB8 SER A 515 LYS A 528 1 14 HELIX 18 AB9 GLY A 544 ALA A 554 1 11 HELIX 19 AC1 THR B 27 GLU B 44 1 18 HELIX 20 AC2 PHE B 77 THR B 84 1 8 HELIX 21 AC3 GLY B 99 LYS B 103 5 5 HELIX 22 AC4 GLY B 112 VAL B 118 5 7 HELIX 23 AC5 ASP B 121 ALA B 129 5 9 HELIX 24 AC6 SER B 134 GLU B 138 5 5 HELIX 25 AC7 LYS B 154 ASN B 175 1 22 HELIX 26 AC8 GLU B 194 LEU B 209 1 16 HELIX 27 AC9 HIS B 235 TRP B 239 5 5 HELIX 28 AD1 VAL B 254 SER B 268 1 15 HELIX 29 AD2 VAL B 276 LEU B 282 1 7 HELIX 30 AD3 THR B 296 LEU B 310 1 15 HELIX 31 AD4 ASN B 363 GLY B 384 1 22 HELIX 32 AD5 GLN B 394 TRP B 402 1 9 HELIX 33 AD6 THR B 403 TYR B 405 5 3 HELIX 34 AD7 PRO B 420 GLN B 428 1 9 SHEET 1 AA1 3 ILE A 47 LYS A 49 0 SHEET 2 AA1 3 ILE A 142 TYR A 146 -1 O GLN A 145 N SER A 48 SHEET 3 AA1 3 PHE A 130 ILE A 132 -1 N ILE A 132 O ILE A 142 SHEET 1 AA2 2 VAL A 60 LYS A 64 0 SHEET 2 AA2 2 TRP A 71 VAL A 75 -1 O LEU A 74 N PHE A 61 SHEET 1 AA3 3 SER A 105 ASP A 110 0 SHEET 2 AA3 3 ASP A 186 SER A 191 -1 O VAL A 189 N THR A 107 SHEET 3 AA3 3 VAL A 179 TYR A 183 -1 N TYR A 183 O ASP A 186 SHEET 1 AA4 3 PHE A 227 TRP A 229 0 SHEET 2 AA4 3 TYR A 232 LEU A 234 -1 O LEU A 234 N PHE A 227 SHEET 3 AA4 3 TRP A 239 VAL A 241 -1 O THR A 240 N GLU A 233 SHEET 1 AA5 2 TRP A 252 THR A 253 0 SHEET 2 AA5 2 VAL A 292 ILE A 293 -1 O ILE A 293 N TRP A 252 SHEET 1 AA6 5 ASN A 348 TYR A 354 0 SHEET 2 AA6 5 GLN A 336 TYR A 342 -1 N ILE A 341 O LEU A 349 SHEET 3 AA6 5 ILE A 326 GLN A 332 -1 N ILE A 326 O TYR A 342 SHEET 4 AA6 5 LYS A 388 LEU A 391 1 O LYS A 390 N ALA A 327 SHEET 5 AA6 5 TRP A 414 PHE A 416 1 O GLU A 415 N PHE A 389 SHEET 1 AA7 2 HIS A 361 THR A 362 0 SHEET 2 AA7 2 GLN A 512 SER A 513 -1 O GLN A 512 N THR A 362 SHEET 1 AA8 5 GLN A 464 LEU A 469 0 SHEET 2 AA8 5 GLY A 453 THR A 459 -1 N ALA A 455 O VAL A 467 SHEET 3 AA8 5 GLU A 438 ALA A 446 -1 N TYR A 441 O VAL A 458 SHEET 4 AA8 5 GLU A 492 THR A 497 1 O ASN A 494 N PHE A 440 SHEET 5 AA8 5 LYS A 530 TRP A 535 1 O TYR A 532 N ILE A 495 SHEET 1 AA9 3 ILE B 47 ILE B 50 0 SHEET 2 AA9 3 ILE B 142 TYR B 146 -1 O GLN B 145 N SER B 48 SHEET 3 AA9 3 PHE B 130 ILE B 132 -1 N ILE B 132 O ILE B 142 SHEET 1 AB1 2 VAL B 60 LYS B 64 0 SHEET 2 AB1 2 TRP B 71 VAL B 75 -1 O LEU B 74 N PHE B 61 SHEET 1 AB2 3 SER B 105 ASP B 110 0 SHEET 2 AB2 3 ASP B 186 SER B 191 -1 O VAL B 189 N THR B 107 SHEET 3 AB2 3 VAL B 179 TYR B 183 -1 N TYR B 183 O ASP B 186 SHEET 1 AB3 2 TRP B 252 THR B 253 0 SHEET 2 AB3 2 VAL B 292 ILE B 293 -1 O ILE B 293 N TRP B 252 SHEET 1 AB4 5 ASN B 348 ALA B 355 0 SHEET 2 AB4 5 GLN B 336 TYR B 342 -1 N ILE B 341 O LEU B 349 SHEET 3 AB4 5 ILE B 326 GLY B 333 -1 N ILE B 326 O TYR B 342 SHEET 4 AB4 5 LYS B 388 LEU B 391 1 O LYS B 390 N ALA B 327 SHEET 5 AB4 5 TRP B 414 PHE B 416 1 O GLU B 415 N LEU B 391 LINK O3' DG P 816 P G47 P 817 1555 1555 1.60 LINK O3' G47 P 817 P DC P 818 1555 1555 1.60 LINK SG G47 P 817 SG CYS A 258 1555 1555 2.03 LINK O3' DG P 822 P D4M P 901 1555 1555 1.56 LINK O3' DG P 822 MG MG P 903 1555 1555 2.48 LINK OP1 D4M P 901 MG MG P 903 1555 1555 2.19 LINK MG MG P 903 OD1 ASP A 110 1555 1555 2.34 LINK MG MG P 903 OD2 ASP A 110 1555 1555 2.76 LINK MG MG P 903 OD1 ASP A 185 1555 1555 2.62 LINK MG MG P 903 O2A D4T A 603 1555 1555 2.36 LINK OD2 ASP A 110 MG MG A 602 1555 1555 2.10 LINK O VAL A 111 MG MG A 602 1555 1555 1.99 LINK OD2 ASP A 185 MG MG A 602 1555 1555 2.47 LINK OD1 ASP A 443 MG MG A 601 1555 1555 2.04 LINK OE2 GLU A 478 MG MG A 601 1555 1555 2.13 LINK OD1 ASP A 498 MG MG A 601 1555 1555 2.10 LINK OD2 ASP A 498 MG MG A 601 1555 1555 2.54 LINK MG MG A 601 O HOH A 709 1555 1555 2.81 LINK MG MG A 602 O2C D4T A 603 1555 1555 2.20 LINK MG MG A 602 O2A D4T A 603 1555 1555 2.26 LINK MG MG A 602 O2B D4T A 603 1555 1555 2.38 CISPEP 1 PRO A 225 PRO A 226 0 4.38 CISPEP 2 PRO A 420 PRO A 421 0 -0.78 SITE 1 AC1 10 LYS A 66 ASP A 110 LYS A 220 GLN A 222 SITE 2 AC1 10 LEU A 228 D4T A 603 HOH A 708 DG P 822 SITE 3 AC1 10 MG P 903 HOH P1006 SITE 1 AC2 4 DG P 816 G47 P 817 DG T 710 DC T 711 SITE 1 AC3 6 ASP A 110 ASP A 185 MG A 602 D4T A 603 SITE 2 AC3 6 DG P 822 D4M P 901 SITE 1 AC4 3 HOH P1001 DG T 707 DG T 708 SITE 1 AC5 4 ASP A 443 GLU A 478 ASP A 498 HOH A 709 SITE 1 AC6 6 ASP A 110 VAL A 111 ASP A 185 LYS A 220 SITE 2 AC6 6 D4T A 603 MG P 903 SITE 1 AC7 20 LYS A 65 LYS A 70 ARG A 72 ASP A 110 SITE 2 AC7 20 VAL A 111 GLY A 112 ASP A 113 ALA A 114 SITE 3 AC7 20 TYR A 115 GLN A 151 ASP A 185 LYS A 220 SITE 4 AC7 20 MG A 602 HOH A 708 HOH A 734 DG P 822 SITE 5 AC7 20 D4M P 901 MG P 903 DA T 705 HOH T 901 SITE 1 AC8 5 ARG A 206 ASN A 460 ARG A 461 HOH A 704 SITE 2 AC8 5 ALA B 288 SITE 1 AC9 7 LYS A 101 LYS A 103 VAL A 106 TYR A 188 SITE 2 AC9 7 HIS A 235 PRO A 236 TYR A 318 SITE 1 AD1 8 LEU A 92 VAL A 381 GLN B 23 TRP B 24 SITE 2 AD1 8 PRO B 25 PRO B 133 SER B 134 ASN B 137 CRYST1 165.569 170.468 103.343 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006040 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005866 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009677 0.00000