HEADER IMMUNE SYSTEM 01-MAY-20 6WT4 TITLE STRUCTURE OF A BACTERIAL STING RECEPTOR FROM FLAVOBACTERIACEAE SP. IN TITLE 2 COMPLEX WITH 3',3'-CGAMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACTERIAL STING; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FLAVOBACTERIACEAE; SOURCE 3 ORGANISM_TAXID: 49546; SOURCE 4 STRAIN: FLAVOBACTERIACEAE SP. GENOME BIN 11; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CBASS, CYCLIC DINUCLEOTIDE RECEPTOR, CD-NTASE, IMMUNE EFFECTOR, KEYWDS 2 IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR B.R.MOREHOUSE,A.A.GOVANDE,A.MILLMAN,A.F.A.KESZEI,B.LOWEY,G.OFIR, AUTHOR 2 S.SHAO,R.SOREK,P.J.KRANZUSCH REVDAT 3 28-OCT-20 6WT4 1 JRNL REVDAT 2 16-SEP-20 6WT4 1 TITLE SOURCE JRNL REVDAT 1 09-SEP-20 6WT4 0 JRNL AUTH B.R.MOREHOUSE,A.A.GOVANDE,A.MILLMAN,A.F.A.KESZEI,B.LOWEY, JRNL AUTH 2 G.OFIR,S.SHAO,R.SOREK,P.J.KRANZUSCH JRNL TITL STING CYCLIC DINUCLEOTIDE SENSING ORIGINATED IN BACTERIA. JRNL REF NATURE V. 586 429 2020 JRNL REFN ESSN 1476-4687 JRNL PMID 32877915 JRNL DOI 10.1038/S41586-020-2719-5 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 33929 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2003 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.0800 - 4.2900 1.00 2373 153 0.1610 0.1738 REMARK 3 2 4.2900 - 3.4100 1.00 2323 143 0.1661 0.2244 REMARK 3 3 3.4000 - 2.9800 1.00 2284 148 0.2120 0.2069 REMARK 3 4 2.9700 - 2.7000 1.00 2303 141 0.2324 0.3014 REMARK 3 5 2.7000 - 2.5100 1.00 2288 145 0.2252 0.2501 REMARK 3 6 2.5100 - 2.3600 1.00 2304 144 0.2231 0.2625 REMARK 3 7 2.3600 - 2.2400 1.00 2272 142 0.2204 0.2629 REMARK 3 8 2.2400 - 2.1500 1.00 2268 144 0.2190 0.2609 REMARK 3 9 2.1500 - 2.0600 1.00 2299 143 0.2170 0.2444 REMARK 3 10 2.0600 - 1.9900 1.00 2247 139 0.2363 0.2772 REMARK 3 11 1.9900 - 1.9300 1.00 2292 144 0.2595 0.2902 REMARK 3 12 1.9300 - 1.8700 0.96 2147 136 0.3086 0.3830 REMARK 3 13 1.8700 - 1.8200 1.00 2301 142 0.2837 0.3186 REMARK 3 14 1.8200 - 1.7800 0.98 2225 139 0.2978 0.3410 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.231 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.754 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2521 REMARK 3 ANGLE : 0.632 3421 REMARK 3 CHIRALITY : 0.043 385 REMARK 3 PLANARITY : 0.003 413 REMARK 3 DIHEDRAL : 16.605 923 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 162 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.1679 20.5466 28.7551 REMARK 3 T TENSOR REMARK 3 T11: 0.4999 T22: 0.3855 REMARK 3 T33: 0.4365 T12: -0.0390 REMARK 3 T13: -0.0150 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 0.0534 L22: 0.1271 REMARK 3 L33: 0.2549 L12: 0.0454 REMARK 3 L13: -0.1309 L23: -0.1721 REMARK 3 S TENSOR REMARK 3 S11: -0.3314 S12: 0.2620 S13: -0.2329 REMARK 3 S21: -0.0564 S22: 0.3835 S23: -0.1095 REMARK 3 S31: 0.5043 S32: -0.0869 S33: -0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 172 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.2154 24.8452 28.6212 REMARK 3 T TENSOR REMARK 3 T11: 0.4124 T22: 0.4435 REMARK 3 T33: 0.5621 T12: 0.0985 REMARK 3 T13: -0.0160 T23: -0.0178 REMARK 3 L TENSOR REMARK 3 L11: -0.0010 L22: -0.0545 REMARK 3 L33: 0.0509 L12: -0.0997 REMARK 3 L13: -0.0338 L23: -0.1125 REMARK 3 S TENSOR REMARK 3 S11: -0.1807 S12: -0.5389 S13: -0.0769 REMARK 3 S21: 0.0362 S22: -0.0436 S23: -0.3734 REMARK 3 S31: 0.3042 S32: -0.1359 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 200 THROUGH 218 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.8152 26.4286 39.7855 REMARK 3 T TENSOR REMARK 3 T11: 0.4226 T22: 0.7884 REMARK 3 T33: 0.4720 T12: -0.0300 REMARK 3 T13: -0.0942 T23: -0.0259 REMARK 3 L TENSOR REMARK 3 L11: 0.1578 L22: 0.3500 REMARK 3 L33: 0.1528 L12: 0.2225 REMARK 3 L13: -0.1607 L23: -0.2336 REMARK 3 S TENSOR REMARK 3 S11: 0.2499 S12: -1.0092 S13: 0.0773 REMARK 3 S21: 0.4927 S22: -0.1902 S23: -0.7694 REMARK 3 S31: 0.4010 S32: 0.3114 S33: -0.0170 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 219 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.9407 28.1558 42.7378 REMARK 3 T TENSOR REMARK 3 T11: 0.4613 T22: 0.8316 REMARK 3 T33: 0.4300 T12: 0.1228 REMARK 3 T13: -0.0309 T23: -0.1936 REMARK 3 L TENSOR REMARK 3 L11: 0.0214 L22: 0.0532 REMARK 3 L33: 0.0043 L12: -0.0464 REMARK 3 L13: 0.0104 L23: -0.0502 REMARK 3 S TENSOR REMARK 3 S11: 0.2251 S12: -0.7427 S13: 0.1013 REMARK 3 S21: 0.3309 S22: -0.1894 S23: 0.2113 REMARK 3 S31: -0.3066 S32: -0.8921 S33: 0.0140 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 225 THROUGH 234 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.2401 15.1720 35.1113 REMARK 3 T TENSOR REMARK 3 T11: 0.6037 T22: 0.4903 REMARK 3 T33: 0.6218 T12: -0.0019 REMARK 3 T13: -0.0086 T23: 0.0695 REMARK 3 L TENSOR REMARK 3 L11: -0.0026 L22: 0.0255 REMARK 3 L33: 0.0380 L12: 0.0335 REMARK 3 L13: -0.0903 L23: -0.0448 REMARK 3 S TENSOR REMARK 3 S11: -0.3154 S12: -0.7225 S13: -0.8437 REMARK 3 S21: 0.2238 S22: 0.0613 S23: -0.1691 REMARK 3 S31: 0.5482 S32: -0.1801 S33: 0.0006 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.4305 32.4169 17.4004 REMARK 3 T TENSOR REMARK 3 T11: 0.2904 T22: 0.3666 REMARK 3 T33: 0.3829 T12: -0.0129 REMARK 3 T13: 0.0523 T23: -0.1797 REMARK 3 L TENSOR REMARK 3 L11: 0.6422 L22: 0.4186 REMARK 3 L33: 0.4430 L12: 0.2139 REMARK 3 L13: -0.6665 L23: -0.4196 REMARK 3 S TENSOR REMARK 3 S11: -0.1358 S12: -0.0145 S13: -0.4801 REMARK 3 S21: 0.0355 S22: 0.0826 S23: -0.2653 REMARK 3 S31: 0.2383 S32: 0.3241 S33: -0.2821 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.7106 45.4283 16.9420 REMARK 3 T TENSOR REMARK 3 T11: 0.3481 T22: 0.4439 REMARK 3 T33: 0.3405 T12: -0.1043 REMARK 3 T13: 0.0003 T23: -0.1368 REMARK 3 L TENSOR REMARK 3 L11: 0.7930 L22: 0.6195 REMARK 3 L33: 0.4295 L12: -0.0146 REMARK 3 L13: 0.2633 L23: -0.5286 REMARK 3 S TENSOR REMARK 3 S11: -0.1246 S12: 0.5058 S13: 0.2907 REMARK 3 S21: -0.0652 S22: 0.0372 S23: -0.1293 REMARK 3 S31: -0.4267 S32: -0.2494 S33: -0.0069 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 123 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.7451 44.7405 14.0658 REMARK 3 T TENSOR REMARK 3 T11: 0.4095 T22: 0.3256 REMARK 3 T33: 0.3642 T12: -0.0482 REMARK 3 T13: -0.0675 T23: -0.0600 REMARK 3 L TENSOR REMARK 3 L11: 0.5478 L22: -0.1028 REMARK 3 L33: 0.4705 L12: 0.0479 REMARK 3 L13: 0.6075 L23: -0.0016 REMARK 3 S TENSOR REMARK 3 S11: -0.2187 S12: -0.0349 S13: 0.0924 REMARK 3 S21: -0.2182 S22: 0.1775 S23: 0.2699 REMARK 3 S31: -0.0774 S32: 0.0676 S33: -0.0001 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.7956 23.0877 16.5683 REMARK 3 T TENSOR REMARK 3 T11: 0.5425 T22: 0.4505 REMARK 3 T33: 0.5919 T12: 0.1179 REMARK 3 T13: -0.0026 T23: -0.0935 REMARK 3 L TENSOR REMARK 3 L11: -0.0395 L22: 0.0290 REMARK 3 L33: 0.0150 L12: 0.0170 REMARK 3 L13: -0.0987 L23: -0.1190 REMARK 3 S TENSOR REMARK 3 S11: -0.6759 S12: 0.2514 S13: -1.1891 REMARK 3 S21: 0.1377 S22: 0.6187 S23: 0.2595 REMARK 3 S31: 0.2406 S32: 0.2654 S33: -0.0004 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.6663 38.9637 10.1850 REMARK 3 T TENSOR REMARK 3 T11: 0.3540 T22: 0.3705 REMARK 3 T33: 0.2837 T12: -0.0464 REMARK 3 T13: -0.0360 T23: -0.1672 REMARK 3 L TENSOR REMARK 3 L11: 0.7336 L22: 0.3378 REMARK 3 L33: 0.0373 L12: -0.2188 REMARK 3 L13: 0.1467 L23: -0.2181 REMARK 3 S TENSOR REMARK 3 S11: 0.1053 S12: 0.2465 S13: -0.5055 REMARK 3 S21: -0.1366 S22: 0.1913 S23: 0.0309 REMARK 3 S31: 0.2056 S32: 0.2506 S33: 0.1879 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 172 THROUGH 193 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.4227 42.6778 34.0342 REMARK 3 T TENSOR REMARK 3 T11: 0.4249 T22: 0.4662 REMARK 3 T33: 0.3178 T12: -0.0072 REMARK 3 T13: -0.0151 T23: -0.1849 REMARK 3 L TENSOR REMARK 3 L11: 0.0282 L22: 0.0292 REMARK 3 L33: 0.0484 L12: -0.0175 REMARK 3 L13: -0.0288 L23: 0.0172 REMARK 3 S TENSOR REMARK 3 S11: -0.2756 S12: -0.5230 S13: 0.2143 REMARK 3 S21: 0.1467 S22: -0.0879 S23: 0.1790 REMARK 3 S31: -0.5854 S32: -0.2861 S33: -0.0428 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 194 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): 58.9011 43.6543 23.4562 REMARK 3 T TENSOR REMARK 3 T11: 0.3398 T22: 0.4008 REMARK 3 T33: 0.4410 T12: -0.0168 REMARK 3 T13: -0.0756 T23: -0.1215 REMARK 3 L TENSOR REMARK 3 L11: 0.6784 L22: 0.4920 REMARK 3 L33: 0.6516 L12: -0.2636 REMARK 3 L13: 0.2192 L23: -0.6221 REMARK 3 S TENSOR REMARK 3 S11: -0.3478 S12: 0.0645 S13: 0.0143 REMARK 3 S21: 0.1772 S22: -0.0430 S23: -0.3325 REMARK 3 S31: -0.3059 S32: 0.2405 S33: -0.4249 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 229 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.1660 52.4384 13.3814 REMARK 3 T TENSOR REMARK 3 T11: 0.6248 T22: 0.6261 REMARK 3 T33: 0.8020 T12: -0.0012 REMARK 3 T13: -0.0017 T23: -0.0189 REMARK 3 L TENSOR REMARK 3 L11: 0.0323 L22: 0.0374 REMARK 3 L33: 0.0580 L12: -0.0248 REMARK 3 L13: 0.0613 L23: -0.0453 REMARK 3 S TENSOR REMARK 3 S11: -0.3078 S12: -0.4826 S13: 0.7282 REMARK 3 S21: -0.2445 S22: 0.5420 S23: 0.0496 REMARK 3 S31: -0.7444 S32: -0.0473 S33: -0.0002 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 79 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.6305 33.2034 34.5570 REMARK 3 T TENSOR REMARK 3 T11: 0.2838 T22: 0.5233 REMARK 3 T33: 0.3272 T12: 0.0156 REMARK 3 T13: 0.0033 T23: -0.0830 REMARK 3 L TENSOR REMARK 3 L11: 0.0607 L22: 0.0531 REMARK 3 L33: 0.1877 L12: -0.0653 REMARK 3 L13: -0.0751 L23: 0.1151 REMARK 3 S TENSOR REMARK 3 S11: -0.0888 S12: -0.4603 S13: 0.4290 REMARK 3 S21: 0.0298 S22: 0.2092 S23: 0.2074 REMARK 3 S31: -0.0302 S32: 0.3563 S33: 0.0000 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 92 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.0316 32.5362 32.6608 REMARK 3 T TENSOR REMARK 3 T11: 0.3131 T22: 0.3285 REMARK 3 T33: 0.4674 T12: -0.0136 REMARK 3 T13: 0.0348 T23: -0.0253 REMARK 3 L TENSOR REMARK 3 L11: 0.0850 L22: 0.1718 REMARK 3 L33: 0.0773 L12: 0.2457 REMARK 3 L13: 0.1041 L23: 0.1114 REMARK 3 S TENSOR REMARK 3 S11: 0.4556 S12: -0.1687 S13: 0.4065 REMARK 3 S21: 0.1393 S22: 0.0321 S23: 0.3919 REMARK 3 S31: 0.0350 S32: 0.1548 S33: -0.0003 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 103 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.4096 20.1555 33.0329 REMARK 3 T TENSOR REMARK 3 T11: 0.4556 T22: 0.4105 REMARK 3 T33: 0.4749 T12: 0.0794 REMARK 3 T13: -0.0131 T23: 0.0774 REMARK 3 L TENSOR REMARK 3 L11: 0.1549 L22: 0.0125 REMARK 3 L33: 0.3130 L12: 0.1457 REMARK 3 L13: -0.3430 L23: -0.2229 REMARK 3 S TENSOR REMARK 3 S11: 0.0371 S12: -0.0913 S13: -0.3032 REMARK 3 S21: 0.0138 S22: -0.0809 S23: 0.0168 REMARK 3 S31: 0.4094 S32: 0.0542 S33: 0.0001 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 123 THROUGH 135 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.9360 12.5909 22.8172 REMARK 3 T TENSOR REMARK 3 T11: 0.8863 T22: 0.4258 REMARK 3 T33: 0.6172 T12: 0.1919 REMARK 3 T13: 0.0581 T23: -0.1830 REMARK 3 L TENSOR REMARK 3 L11: 0.0291 L22: 0.7476 REMARK 3 L33: 1.3333 L12: 0.0182 REMARK 3 L13: -0.1400 L23: -0.6866 REMARK 3 S TENSOR REMARK 3 S11: -0.1571 S12: -0.0436 S13: -0.9446 REMARK 3 S21: -0.0926 S22: -0.1944 S23: 0.0896 REMARK 3 S31: 0.7031 S32: 0.4587 S33: -0.1634 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 136 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.5663 21.9432 23.1355 REMARK 3 T TENSOR REMARK 3 T11: 0.5049 T22: 0.3791 REMARK 3 T33: 0.4951 T12: -0.0693 REMARK 3 T13: -0.0064 T23: 0.0378 REMARK 3 L TENSOR REMARK 3 L11: 0.0944 L22: -0.0003 REMARK 3 L33: 0.1522 L12: 0.0675 REMARK 3 L13: 0.1008 L23: -0.0050 REMARK 3 S TENSOR REMARK 3 S11: -0.0785 S12: 0.5027 S13: -0.2014 REMARK 3 S21: 0.4878 S22: 0.2413 S23: 0.4561 REMARK 3 S31: 0.4523 S32: -0.1048 S33: -0.0002 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 145 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.5411 39.9804 26.0761 REMARK 3 T TENSOR REMARK 3 T11: 0.2392 T22: -0.1913 REMARK 3 T33: 0.4636 T12: -0.4524 REMARK 3 T13: 0.2067 T23: -0.0490 REMARK 3 L TENSOR REMARK 3 L11: 0.4904 L22: 0.7803 REMARK 3 L33: 1.3291 L12: 0.3659 REMARK 3 L13: -0.6332 L23: -0.7764 REMARK 3 S TENSOR REMARK 3 S11: 0.8694 S12: 0.5883 S13: 0.2463 REMARK 3 S21: -0.2247 S22: 0.6849 S23: 0.5333 REMARK 3 S31: -2.0794 S32: -0.4657 S33: 0.9372 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 155 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.3842 25.1212 24.5443 REMARK 3 T TENSOR REMARK 3 T11: 0.4617 T22: 0.3056 REMARK 3 T33: 0.4992 T12: -0.0782 REMARK 3 T13: 0.0004 T23: 0.0429 REMARK 3 L TENSOR REMARK 3 L11: 0.0680 L22: -0.0046 REMARK 3 L33: 0.1465 L12: -0.0221 REMARK 3 L13: 0.1255 L23: 0.0578 REMARK 3 S TENSOR REMARK 3 S11: -0.0423 S12: -0.1291 S13: -0.0108 REMARK 3 S21: -0.8294 S22: -0.1441 S23: -0.1909 REMARK 3 S31: 0.4360 S32: -0.1531 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WT4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1000248947. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-AUG-19 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34093 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 44.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M AMMONIUM SULFATE, 0.2 M SODIUM REMARK 280 ACETATE PH 4.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 60.92400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.92400 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 24.08000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 60.92400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.92400 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 24.08000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 60.92400 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 60.92400 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 24.08000 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 60.92400 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 60.92400 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 24.08000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 74 REMARK 465 GLU A 75 REMARK 465 ALA A 76 REMARK 465 GLU A 77 REMARK 465 TYR A 78 REMARK 465 PHE A 183 REMARK 465 LYS A 184 REMARK 465 ILE A 185 REMARK 465 ALA A 186 REMARK 465 SER A 187 REMARK 465 SER A 188 REMARK 465 ASN A 189 REMARK 465 ASN A 190 REMARK 465 ASN A 191 REMARK 465 SER A 192 REMARK 465 SER B 74 REMARK 465 GLU B 75 REMARK 465 ALA B 76 REMARK 465 GLU B 77 REMARK 465 TYR B 78 REMARK 465 ASP B 182 REMARK 465 PHE B 183 REMARK 465 LYS B 184 REMARK 465 ILE B 185 REMARK 465 ALA B 186 REMARK 465 SER B 187 REMARK 465 SER B 188 REMARK 465 ASN B 189 REMARK 465 ASN B 190 REMARK 465 ASN B 191 REMARK 465 SER B 192 REMARK 465 SER B 193 REMARK 465 GLU B 194 REMARK 465 LEU B 195 REMARK 465 LYS B 196 REMARK 465 LYS B 197 REMARK 465 LEU B 235 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 92 -66.60 -137.57 REMARK 500 PRO A 171 105.76 -59.35 REMARK 500 PHE B 92 -66.41 -135.71 REMARK 500 LYS B 116 -13.45 -141.77 REMARK 500 LYS B 137 31.54 70.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4BW A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 302 DBREF 6WT4 A 74 235 PDB 6WT4 6WT4 74 235 DBREF 6WT4 B 74 235 PDB 6WT4 6WT4 74 235 SEQRES 1 A 162 SER GLU ALA GLU TYR SER PRO ALA PHE ALA LEU ALA VAL SEQRES 2 A 162 GLY TYR PHE LYS ASN PHE ILE PHE PRO ALA ILE THR GLN SEQRES 3 A 162 ILE LYS GLU ASN GLY GLU VAL ASN PRO LYS ILE CYS ILE SEQRES 4 A 162 TYR LYS PRO LYS HIS PHE ASP GLU LEU THR SER THR ASN SEQRES 5 A 162 ILE ASP MET ILE LYS ALA GLU LEU THR ASN LYS LYS TYR SEQRES 6 A 162 ASN LEU SER GLU ILE ASN LEU SER LEU LYS GLY ALA ARG SEQRES 7 A 162 ALA ARG ASP ILE LEU THR LEU ASN LYS LYS SER LYS ILE SEQRES 8 A 162 HIS SER TYR PHE ASP PHE PRO ASN THR LEU LEU SER LEU SEQRES 9 A 162 TYR SER TYR VAL ASP PHE LYS ILE ALA SER SER ASN ASN SEQRES 10 A 162 ASN SER SER GLU LEU LYS LYS LYS LYS PHE VAL GLU LEU SEQRES 11 A 162 LEU ILE GLU GLN PHE TYR LEU LYS LEU ASN GLU LEU ILE SEQRES 12 A 162 GLN GLU ASN ASN LEU THR ASN ASN ILE THR PHE CYS ASP SEQRES 13 A 162 LYS ASN LEU GLN GLY LEU SEQRES 1 B 162 SER GLU ALA GLU TYR SER PRO ALA PHE ALA LEU ALA VAL SEQRES 2 B 162 GLY TYR PHE LYS ASN PHE ILE PHE PRO ALA ILE THR GLN SEQRES 3 B 162 ILE LYS GLU ASN GLY GLU VAL ASN PRO LYS ILE CYS ILE SEQRES 4 B 162 TYR LYS PRO LYS HIS PHE ASP GLU LEU THR SER THR ASN SEQRES 5 B 162 ILE ASP MET ILE LYS ALA GLU LEU THR ASN LYS LYS TYR SEQRES 6 B 162 ASN LEU SER GLU ILE ASN LEU SER LEU LYS GLY ALA ARG SEQRES 7 B 162 ALA ARG ASP ILE LEU THR LEU ASN LYS LYS SER LYS ILE SEQRES 8 B 162 HIS SER TYR PHE ASP PHE PRO ASN THR LEU LEU SER LEU SEQRES 9 B 162 TYR SER TYR VAL ASP PHE LYS ILE ALA SER SER ASN ASN SEQRES 10 B 162 ASN SER SER GLU LEU LYS LYS LYS LYS PHE VAL GLU LEU SEQRES 11 B 162 LEU ILE GLU GLN PHE TYR LEU LYS LEU ASN GLU LEU ILE SEQRES 12 B 162 GLN GLU ASN ASN LEU THR ASN ASN ILE THR PHE CYS ASP SEQRES 13 B 162 LYS ASN LEU GLN GLY LEU HET 4BW A 301 90 HET SO4 B 301 5 HET SO4 B 302 5 HETNAM 4BW 2-AMINO-9-[(2R,3R,3AS,5R,7AR,9R,10R,10AS,12R,14AR)-9- HETNAM 2 4BW (6-AMINO-9H-PURIN-9-YL)-3,5,10,12-TETRAHYDROXY-5,12- HETNAM 3 4BW DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3,2-D:3',2'-J][1,3,7,9, HETNAM 4 4BW 2,8]TETRAOXADIPHOSPHACYCLODODECIN-2-YL]-1,9-DIHYDRO- HETNAM 5 4BW 6H-PURIN-6-ONE HETNAM SO4 SULFATE ION HETSYN 4BW 3',3' CGAMP; C-GMP-AMP; C[G(3',5')PA(3',5')P] FORMUL 3 4BW C20 H24 N10 O13 P2 FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 HOH *98(H2 O) HELIX 1 AA1 SER A 79 PHE A 92 1 14 HELIX 2 AA2 PHE A 92 ASN A 103 1 12 HELIX 3 AA3 HIS A 117 LEU A 121 5 5 HELIX 4 AA4 THR A 122 LYS A 136 1 15 HELIX 5 AA5 PRO A 171 LEU A 175 5 5 HELIX 6 AA6 SER A 176 ASP A 182 1 7 HELIX 7 AA7 GLU A 194 ASN A 219 1 26 HELIX 8 AA8 PRO B 80 PHE B 92 1 13 HELIX 9 AA9 PHE B 92 ASN B 103 1 12 HELIX 10 AB1 HIS B 117 LEU B 121 5 5 HELIX 11 AB2 THR B 122 LYS B 136 1 15 HELIX 12 AB3 PRO B 171 LEU B 175 5 5 HELIX 13 AB4 SER B 176 VAL B 181 1 6 HELIX 14 AB5 LYS B 199 ASN B 219 1 21 SHEET 1 AA1 5 TYR A 138 ASN A 144 0 SHEET 2 AA1 5 ILE A 155 LYS A 161 -1 O LEU A 158 N SER A 141 SHEET 3 AA1 5 SER A 166 ASP A 169 -1 O SER A 166 N LYS A 161 SHEET 4 AA1 5 LYS A 109 TYR A 113 1 N LYS A 109 O TYR A 167 SHEET 5 AA1 5 ILE A 225 CYS A 228 1 O THR A 226 N ILE A 112 SHEET 1 AA2 5 TYR B 138 ASN B 144 0 SHEET 2 AA2 5 ILE B 155 LYS B 161 -1 O LEU B 158 N SER B 141 SHEET 3 AA2 5 SER B 166 ASP B 169 -1 O SER B 166 N LYS B 161 SHEET 4 AA2 5 LYS B 109 TYR B 113 1 N CYS B 111 O TYR B 167 SHEET 5 AA2 5 ILE B 225 CYS B 228 1 O THR B 226 N ILE B 112 SSBOND 1 CYS A 111 CYS A 228 1555 1555 2.03 SSBOND 2 CYS B 111 CYS B 228 1555 1555 2.03 SITE 1 AC1 25 TYR A 88 ASN A 91 PHE A 92 ARG A 153 SITE 2 AC1 25 LEU A 156 THR A 157 ASP A 169 ASN A 172 SITE 3 AC1 25 THR A 173 HOH A 415 HOH A 419 HOH A 425 SITE 4 AC1 25 HOH A 434 HOH A 441 TYR B 88 ASN B 91 SITE 5 AC1 25 PHE B 92 ARG B 153 LEU B 156 THR B 157 SITE 6 AC1 25 ASP B 169 ASN B 172 THR B 173 HOH B 409 SITE 7 AC1 25 HOH B 410 SITE 1 AC2 5 LYS B 160 LYS B 161 SER B 162 LYS B 163 SITE 2 AC2 5 HOH B 414 SITE 1 AC3 5 LYS A 160 LYS A 161 SER A 162 LYS A 163 SITE 2 AC3 5 HOH A 427 CRYST1 121.848 121.848 48.160 90.00 90.00 90.00 I 4 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008207 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008207 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020764 0.00000