HEADER MEMBRANE PROTEIN 05-MAY-20 6WVD TITLE HUMAN JAGN1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GREEN FLUORESCENT PROTEIN, PROTEIN JAGUNAL HOMOLOG 1 COMPND 3 CHIMERA; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA, HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: JELLYFISH, HUMAN; SOURCE 4 ORGANISM_TAXID: 6100, 9606; SOURCE 5 GENE: GFP, JAGN1; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS JAGN1, PROTEIN JAGUNAL HOMOLOG 1, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.YANG,S.LIU,W.LI REVDAT 4 30-OCT-24 6WVD 1 REMARK REVDAT 3 15-NOV-23 6WVD 1 REMARK REVDAT 2 18-OCT-23 6WVD 1 REMARK REVDAT 1 13-JAN-21 6WVD 0 JRNL AUTH S.LIU,S.LI,Y.YANG,W.LI JRNL TITL TERMINI RESTRAINING OF SMALL MEMBRANE PROTEINS ENABLES JRNL TITL 2 STRUCTURE DETERMINATION AT NEAR-ATOMIC RESOLUTION. JRNL REF SCI ADV V. 6 2020 JRNL REFN ESSN 2375-2548 JRNL PMID 33355146 JRNL DOI 10.1126/SCIADV.ABE3717 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 19195 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 922 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.4400 - 4.3000 0.96 2689 157 0.1839 0.1948 REMARK 3 2 4.3000 - 3.4200 0.95 2636 122 0.1794 0.2057 REMARK 3 3 3.4200 - 2.9800 0.95 2610 121 0.2005 0.2639 REMARK 3 4 2.9800 - 2.7100 0.97 2628 120 0.2145 0.2640 REMARK 3 5 2.7100 - 2.5200 0.95 2546 135 0.2075 0.2557 REMARK 3 6 2.5200 - 2.3700 0.96 2614 135 0.2174 0.2681 REMARK 3 7 2.3700 - 2.2500 0.95 2550 132 0.2325 0.2794 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.5112 -5.4952 40.9419 REMARK 3 T TENSOR REMARK 3 T11: 0.3056 T22: 0.2014 REMARK 3 T33: 0.3226 T12: 0.0182 REMARK 3 T13: -0.0226 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 2.6537 L22: 3.1250 REMARK 3 L33: 4.0150 L12: 0.4857 REMARK 3 L13: 1.2509 L23: 2.2311 REMARK 3 S TENSOR REMARK 3 S11: -0.1505 S12: -0.0194 S13: 0.1332 REMARK 3 S21: -0.2833 S22: -0.2582 S23: 0.3213 REMARK 3 S31: -0.3746 S32: -0.3003 S33: 0.3899 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 164 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.6341 -2.3998 3.4029 REMARK 3 T TENSOR REMARK 3 T11: 0.2029 T22: 0.2340 REMARK 3 T33: 0.3173 T12: 0.0367 REMARK 3 T13: 0.0189 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 2.5586 L22: 1.7662 REMARK 3 L33: 6.8817 L12: 0.6423 REMARK 3 L13: -1.6125 L23: -0.3891 REMARK 3 S TENSOR REMARK 3 S11: 0.0935 S12: 0.3162 S13: 0.1981 REMARK 3 S21: -0.0821 S22: -0.0254 S23: -0.1055 REMARK 3 S31: -0.4971 S32: -0.5089 S33: -0.1167 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 237 THROUGH 337 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.8054 -11.8458 6.5280 REMARK 3 T TENSOR REMARK 3 T11: 0.2425 T22: 0.2448 REMARK 3 T33: 0.2502 T12: -0.0352 REMARK 3 T13: 0.0198 T23: -0.0331 REMARK 3 L TENSOR REMARK 3 L11: 3.8566 L22: 0.1520 REMARK 3 L33: 3.6844 L12: 0.3238 REMARK 3 L13: -3.6506 L23: -0.6053 REMARK 3 S TENSOR REMARK 3 S11: -0.0700 S12: 0.1163 S13: -0.0772 REMARK 3 S21: -0.0259 S22: -0.0611 S23: 0.0336 REMARK 3 S31: 0.2103 S32: -0.1591 S33: 0.1067 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 338 THROUGH 413 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5106 -10.8478 39.9461 REMARK 3 T TENSOR REMARK 3 T11: 0.2791 T22: 0.2276 REMARK 3 T33: 0.2046 T12: 0.0110 REMARK 3 T13: -0.0193 T23: 0.0240 REMARK 3 L TENSOR REMARK 3 L11: 2.8538 L22: 2.5773 REMARK 3 L33: 3.3243 L12: -0.5762 REMARK 3 L13: 0.1252 L23: 0.7183 REMARK 3 S TENSOR REMARK 3 S11: -0.1203 S12: -0.0472 S13: -0.0236 REMARK 3 S21: -0.0311 S22: -0.0731 S23: 0.0681 REMARK 3 S31: 0.0411 S32: -0.1706 S33: 0.1958 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WVD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1000249045. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19195 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.60700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2B3P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG400, 0.1 M LI2SO4, 0.1M NACL, REMARK 280 0.1 M TRIS PH 8.0, LIPIDIC CUBIC PHASE, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 45.38700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.35900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 45.38700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.35900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 149 REMARK 465 GLY A 150 REMARK 465 PRO A 151 REMARK 465 ARG A 152 REMARK 465 ALA A 153 REMARK 465 ALA A 154 REMARK 465 GLY A 155 REMARK 465 THR A 156 REMARK 465 ASP A 157 REMARK 465 GLY A 158 REMARK 465 SER A 159 REMARK 465 ASP A 160 REMARK 465 PHE A 161 REMARK 465 HIS A 414 REMARK 465 HIS A 415 REMARK 465 HIS A 416 REMARK 465 HIS A 417 REMARK 465 HIS A 418 REMARK 465 HIS A 419 REMARK 465 HIS A 420 REMARK 465 HIS A 421 REMARK 465 HIS A 422 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 ARG A 148 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 162 CG CD OE1 NE2 REMARK 470 HIS A 413 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 5 O HOH A 601 2.07 REMARK 500 O ASN A 328 O HOH A 602 2.11 REMARK 500 OD1 ASP A 355 OG SER A 357 2.14 REMARK 500 N ASP A 102 O HOH A 603 2.16 REMARK 500 ND2 ASN A 380 O HOH A 604 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 694 O HOH A 695 3445 2.11 REMARK 500 OD2 ASP A 133 NH2 ARG A 350 4556 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 103 -154.15 -156.18 REMARK 500 ILE A 136 -70.27 -87.84 REMARK 500 ALA A 409 0.98 -158.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 695 DISTANCE = 6.35 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 OLC A 501 REMARK 610 OLC A 502 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 502 DBREF 6WVD A 1 144 UNP P42212 GFP_AEQVI 1 144 DBREF 6WVD A 145 327 UNP Q8N5M9 JAGN1_HUMAN 1 183 DBREF 6WVD A 328 413 UNP P42212 GFP_AEQVI 146 231 SEQADV 6WVD ARG A 30 UNP P42212 SER 30 CONFLICT SEQADV 6WVD ASN A 39 UNP P42212 TYR 39 CONFLICT SEQADV 6WVD LEU A 64 UNP P42212 PHE 64 CONFLICT SEQADV 6WVD CRO A 66 UNP P42212 SER 65 CHROMOPHORE SEQADV 6WVD CRO A 66 UNP P42212 TYR 66 CHROMOPHORE SEQADV 6WVD CRO A 66 UNP P42212 GLY 67 CHROMOPHORE SEQADV 6WVD ARG A 80 UNP P42212 GLN 80 CONFLICT SEQADV 6WVD SER A 99 UNP P42212 PHE 99 CONFLICT SEQADV 6WVD THR A 105 UNP P42212 ASN 105 CONFLICT SEQADV 6WVD THR A 335 UNP P42212 MET 153 CONFLICT SEQADV 6WVD ALA A 345 UNP P42212 VAL 163 CONFLICT SEQADV 6WVD VAL A 353 UNP P42212 ILE 171 CONFLICT SEQADV 6WVD VAL A 388 UNP P42212 ALA 206 CONFLICT SEQADV 6WVD HIS A 414 UNP P42212 EXPRESSION TAG SEQADV 6WVD HIS A 415 UNP P42212 EXPRESSION TAG SEQADV 6WVD HIS A 416 UNP P42212 EXPRESSION TAG SEQADV 6WVD HIS A 417 UNP P42212 EXPRESSION TAG SEQADV 6WVD HIS A 418 UNP P42212 EXPRESSION TAG SEQADV 6WVD HIS A 419 UNP P42212 EXPRESSION TAG SEQADV 6WVD HIS A 420 UNP P42212 EXPRESSION TAG SEQADV 6WVD HIS A 421 UNP P42212 EXPRESSION TAG SEQADV 6WVD HIS A 422 UNP P42212 EXPRESSION TAG SEQRES 1 A 420 MET SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL PRO SEQRES 2 A 420 ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS SEQRES 3 A 420 PHE SER VAL ARG GLY GLU GLY GLU GLY ASP ALA THR ASN SEQRES 4 A 420 GLY LYS LEU THR LEU LYS PHE ILE CYS THR THR GLY LYS SEQRES 5 A 420 LEU PRO VAL PRO TRP PRO THR LEU VAL THR THR LEU CRO SEQRES 6 A 420 VAL GLN CYS PHE SER ARG TYR PRO ASP HIS MET LYS ARG SEQRES 7 A 420 HIS ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL SEQRES 8 A 420 GLN GLU ARG THR ILE SER PHE LYS ASP ASP GLY THR TYR SEQRES 9 A 420 LYS THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU SEQRES 10 A 420 VAL ASN ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS GLU SEQRES 11 A 420 ASP GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN MET SEQRES 12 A 420 ALA SER ARG ALA GLY PRO ARG ALA ALA GLY THR ASP GLY SEQRES 13 A 420 SER ASP PHE GLN HIS ARG GLU ARG VAL ALA MET HIS TYR SEQRES 14 A 420 GLN MET SER VAL THR LEU LYS TYR GLU ILE LYS LYS LEU SEQRES 15 A 420 ILE TYR VAL HIS LEU VAL ILE TRP LEU LEU LEU VAL ALA SEQRES 16 A 420 LYS MET SER VAL GLY HIS LEU ARG LEU LEU SER HIS ASP SEQRES 17 A 420 GLN VAL ALA MET PRO TYR GLN TRP GLU TYR PRO TYR LEU SEQRES 18 A 420 LEU SER ILE LEU PRO SER LEU LEU GLY LEU LEU SER PHE SEQRES 19 A 420 PRO ARG ASN ASN ILE SER TYR LEU VAL LEU SER MET ILE SEQRES 20 A 420 SER MET GLY LEU PHE SER ILE ALA PRO LEU ILE TYR GLY SEQRES 21 A 420 SER MET GLU MET PHE PRO ALA ALA GLN GLN LEU TYR ARG SEQRES 22 A 420 HIS GLY LYS ALA TYR ARG PHE LEU PHE GLY PHE SER ALA SEQRES 23 A 420 VAL SER ILE MET TYR LEU VAL LEU VAL LEU ALA VAL GLN SEQRES 24 A 420 VAL HIS ALA TRP GLN LEU TYR TYR SER LYS LYS LEU LEU SEQRES 25 A 420 ASP SER TRP PHE THR SER THR GLN GLU LYS LYS HIS LYS SEQRES 26 A 420 ASN SER HIS ASN VAL TYR ILE THR ALA ASP LYS GLN LYS SEQRES 27 A 420 ASN GLY ILE LYS ALA ASN PHE LYS ILE ARG HIS ASN VAL SEQRES 28 A 420 GLU ASP GLY SER VAL GLN LEU ALA ASP HIS TYR GLN GLN SEQRES 29 A 420 ASN THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP SEQRES 30 A 420 ASN HIS TYR LEU SER THR GLN SER VAL LEU SER LYS ASP SEQRES 31 A 420 PRO ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU PHE SEQRES 32 A 420 VAL THR ALA ALA GLY ILE THR HIS HIS HIS HIS HIS HIS SEQRES 33 A 420 HIS HIS HIS HIS MODRES 6WVD CRO A 66 SER CHROMOPHORE MODRES 6WVD CRO A 66 TYR CHROMOPHORE MODRES 6WVD CRO A 66 GLY CHROMOPHORE HET CRO A 66 22 HET OLC A 501 15 HET OLC A 502 10 HETNAM CRO {2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4- HETNAM 2 CRO HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 CRO YL}ACETIC ACID HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETSYN CRO PEPTIDE DERIVED CHROMOPHORE HETSYN OLC 1-OLEOYL-R-GLYCEROL FORMUL 1 CRO C15 H17 N3 O5 FORMUL 2 OLC 2(C21 H40 O4) FORMUL 4 HOH *95(H2 O) HELIX 1 AA1 GLY A 4 THR A 9 5 6 HELIX 2 AA2 PRO A 56 VAL A 61 5 6 HELIX 3 AA3 VAL A 68 SER A 72 5 5 HELIX 4 AA4 PRO A 75 HIS A 81 5 7 HELIX 5 AA5 ASP A 82 ALA A 87 1 6 HELIX 6 AA6 HIS A 163 LEU A 204 1 42 HELIX 7 AA7 TRP A 218 LEU A 223 1 6 HELIX 8 AA8 SER A 225 PHE A 236 1 12 HELIX 9 AA9 ASN A 240 SER A 255 1 16 HELIX 10 AB1 ILE A 256 MET A 266 1 11 HELIX 11 AB2 MET A 266 GLY A 277 1 12 HELIX 12 AB3 ALA A 288 ASN A 328 1 41 HELIX 13 AB4 LYS A 338 ASN A 341 5 4 SHEET 1 AA112 VAL A 11 VAL A 22 0 SHEET 2 AA112 HIS A 25 ASP A 36 -1 O GLY A 31 N VAL A 16 SHEET 3 AA112 LYS A 41 CYS A 48 -1 O ILE A 47 N ARG A 30 SHEET 4 AA112 HIS A 399 ALA A 408 -1 O LEU A 402 N LEU A 44 SHEET 5 AA112 HIS A 381 SER A 390 -1 N SER A 384 O THR A 407 SHEET 6 AA112 SER A 329 ASP A 337 -1 N ILE A 334 O HIS A 381 SHEET 7 AA112 GLY A 342 VAL A 353 -1 O GLY A 342 N ASP A 337 SHEET 8 AA112 SER A 357 PRO A 369 -1 O HIS A 363 N PHE A 347 SHEET 9 AA112 TYR A 92 PHE A 100 -1 N VAL A 93 O THR A 368 SHEET 10 AA112 THR A 105 GLU A 115 -1 O ALA A 110 N GLN A 94 SHEET 11 AA112 THR A 118 ILE A 128 -1 O THR A 118 N GLU A 115 SHEET 12 AA112 VAL A 11 VAL A 22 1 N ASP A 21 O GLY A 127 SHEET 1 AA2 2 PHE A 282 LEU A 283 0 SHEET 2 AA2 2 PHE A 286 SER A 287 -1 O PHE A 286 N LEU A 283 LINK C LEU A 64 N1 CRO A 66 1555 1555 1.41 LINK C3 CRO A 66 N VAL A 68 1555 1555 1.50 CISPEP 1 MET A 88 PRO A 89 0 5.41 SITE 1 AC1 8 GLU A 180 SER A 287 SER A 290 ILE A 291 SITE 2 AC1 8 GLN A 301 VAL A 302 TRP A 305 TYR A 309 SITE 1 AC2 5 TYR A 274 ARG A 275 GLY A 277 TRP A 305 SITE 2 AC2 5 TYR A 308 CRYST1 90.774 42.718 111.782 90.00 103.79 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011016 0.000000 0.002704 0.00000 SCALE2 0.000000 0.023409 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009211 0.00000