HEADER RNA 14-MAY-20 6WZS TITLE FUSIBACTERIUM ULCERANS ZTP RIBOSWITCH BOUND TO M-1-PYRIDINYL AICA COMPND MOL_ID: 1; COMPND 2 MOLECULE: FUSIBACTERIUM ULCERANS ZTP RIBOSWITCH; COMPND 3 CHAIN: B, A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: FUSOBACTERIUM ULCERANS; SOURCE 4 ORGANISM_TAXID: 861 KEYWDS RIBOSWITCH, PSEUDOKNOT, PURINE BIOSYNTHESIS, AICAR, RNA EXPDTA X-RAY DIFFRACTION AUTHOR P.PICHLING,C.P.JONES,A.R.FERRE-D'AMARE,B.TRAN REVDAT 2 18-OCT-23 6WZS 1 REMARK REVDAT 1 24-MAR-21 6WZS 0 JRNL AUTH B.TRAN,P.PICHLING,L.TENNEY,C.M.CONNELLY,M.H.MOON, JRNL AUTH 2 A.R.FERRE-D'AMARE,J.S.SCHNEEKLOTH JR.,C.P.JONES JRNL TITL PARALLEL DISCOVERY STRATEGIES PROVIDE A BASIS FOR RIBOSWITCH JRNL TITL 2 LIGAND DESIGN. JRNL REF CELL CHEM BIOL V. 27 1241 2020 JRNL REFN ESSN 2451-9456 JRNL PMID 32795418 JRNL DOI 10.1016/J.CHEMBIOL.2020.07.021 REMARK 2 REMARK 2 RESOLUTION. 3.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 9537 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.940 REMARK 3 FREE R VALUE TEST SET COUNT : 948 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.9500 - 6.1900 1.00 1315 144 0.2316 0.2489 REMARK 3 2 6.1800 - 4.9100 1.00 1243 138 0.2137 0.2181 REMARK 3 3 4.9000 - 4.2900 1.00 1217 131 0.1724 0.2577 REMARK 3 4 4.2900 - 3.9000 1.00 1217 138 0.1857 0.2616 REMARK 3 5 3.9000 - 3.6200 1.00 1194 134 0.2426 0.3356 REMARK 3 6 3.6200 - 3.4000 1.00 1217 131 0.2870 0.3194 REMARK 3 7 3.4000 - 3.2300 0.99 1186 132 0.3364 0.4180 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.540 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 163.0 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.001 2950 REMARK 3 ANGLE : 0.258 4584 REMARK 3 CHIRALITY : 0.014 608 REMARK 3 PLANARITY : 0.001 128 REMARK 3 DIHEDRAL : 13.151 1451 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 6 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.0312 -22.0063 -55.0792 REMARK 3 T TENSOR REMARK 3 T11: 2.8008 T22: 3.3988 REMARK 3 T33: 1.8931 T12: -0.6997 REMARK 3 T13: -1.0157 T23: 0.5940 REMARK 3 L TENSOR REMARK 3 L11: 2.0009 L22: 5.7004 REMARK 3 L33: 5.6627 L12: 8.8074 REMARK 3 L13: -6.7042 L23: -3.4529 REMARK 3 S TENSOR REMARK 3 S11: 2.9047 S12: -3.8991 S13: -0.3613 REMARK 3 S21: 0.6586 S22: -1.9148 S23: 1.0384 REMARK 3 S31: 1.7456 S32: -0.9724 S33: 0.1068 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 11 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.2370 -24.4188 -38.8440 REMARK 3 T TENSOR REMARK 3 T11: 1.1449 T22: 1.6292 REMARK 3 T33: 0.8124 T12: 0.1348 REMARK 3 T13: 0.3138 T23: 0.3403 REMARK 3 L TENSOR REMARK 3 L11: 3.2470 L22: 7.4935 REMARK 3 L33: 4.8265 L12: 0.5909 REMARK 3 L13: -0.0091 L23: -1.1649 REMARK 3 S TENSOR REMARK 3 S11: 0.7735 S12: 1.1670 S13: 0.8434 REMARK 3 S21: -0.6679 S22: 0.8184 S23: 0.6221 REMARK 3 S31: -0.7763 S32: -0.4539 S33: -0.8384 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 6 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.0203 -49.3721 -43.5672 REMARK 3 T TENSOR REMARK 3 T11: 1.2827 T22: 2.3995 REMARK 3 T33: 0.9969 T12: -0.1934 REMARK 3 T13: -0.0917 T23: -0.4740 REMARK 3 L TENSOR REMARK 3 L11: 0.7732 L22: 3.2689 REMARK 3 L33: 5.7763 L12: -1.0748 REMARK 3 L13: 1.2655 L23: 0.8649 REMARK 3 S TENSOR REMARK 3 S11: 0.4620 S12: 1.5644 S13: -1.1499 REMARK 3 S21: -1.2070 S22: -0.5059 S23: 0.2250 REMARK 3 S31: -1.0900 S32: -0.0440 S33: -0.2405 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.5934 -54.9094 -43.2518 REMARK 3 T TENSOR REMARK 3 T11: 1.7310 T22: 1.9236 REMARK 3 T33: 1.2772 T12: -0.1942 REMARK 3 T13: 0.0829 T23: -0.4743 REMARK 3 L TENSOR REMARK 3 L11: 3.0974 L22: 3.1786 REMARK 3 L33: 2.6597 L12: 2.0767 REMARK 3 L13: 2.1295 L23: -0.0773 REMARK 3 S TENSOR REMARK 3 S11: -0.4948 S12: 1.0178 S13: -1.2884 REMARK 3 S21: -0.6102 S22: 0.8157 S23: -0.3730 REMARK 3 S31: 1.0906 S32: -1.0134 S33: 0.2586 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WZS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1000248214. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAR-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98395 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9567 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.230 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 2.57400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: 5BTP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 26% (W/V) PEG 4000, 100 MM TRIS HCL PH REMARK 280 8.5, 200 MM LITHIUM SULFATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.92733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.46367 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 40.46367 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 80.92733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 U B 1 REMARK 465 A B 2 REMARK 465 U B 3 REMARK 465 C B 4 REMARK 465 A B 5 REMARK 465 A B 47A REMARK 465 A B 47B REMARK 465 C B 47C REMARK 465 G B 47D REMARK 465 A B 47E REMARK 465 U B 47F REMARK 465 G B 47G REMARK 465 A B 57 REMARK 465 A B 58 REMARK 465 U B 59 REMARK 465 U A 1 REMARK 465 A A 2 REMARK 465 U A 3 REMARK 465 C A 4 REMARK 465 A A 5 REMARK 465 A A 52 REMARK 465 U A 53 REMARK 465 G A 54 REMARK 465 A A 55 REMARK 465 C A 56 REMARK 465 A A 57 REMARK 465 A A 58 REMARK 465 U A 59 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 G A 6 P OP1 OP2 REMARK 470 G A 60 P OP1 OP2 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 103 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U B 16 OP1 REMARK 620 2 C B 35 OP2 151.9 REMARK 620 3 UG4 B 107 O06 71.3 85.2 REMARK 620 4 HOH B 201 O 89.0 90.8 56.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 101 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G B 21 O3' REMARK 620 2 G B 21 O2' 57.1 REMARK 620 3 G B 21 O3' 0.0 57.1 REMARK 620 4 G B 21 O2' 57.1 0.0 57.1 REMARK 620 5 A B 22 OP2 40.0 86.1 40.0 86.1 REMARK 620 6 A A 22 OP2 87.3 59.6 87.3 59.6 78.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 103 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U A 16 OP1 REMARK 620 2 C A 35 OP2 123.4 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UG4 B 107 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UG4 A 107 DBREF1 6WZS B 1 75 GB CP028105.1 DBREF2 6WZS B 1370545701 1213150 1213076 DBREF1 6WZS A 1 75 GB CP028105.1 DBREF2 6WZS A 1370545701 1213150 1213076 SEQRES 1 B 75 U A U C A G U U A U A U G SEQRES 2 B 75 A C U G A C G G A A C G U SEQRES 3 B 75 G G A A U U A A C C A C A SEQRES 4 B 75 U G A A G U A U A A C G A SEQRES 5 B 75 U G A C A A U G C C G A C SEQRES 6 B 75 C G U C U G G G C G SEQRES 1 A 75 U A U C A G U U A U A U G SEQRES 2 A 75 A C U G A C G G A A C G U SEQRES 3 A 75 G G A A U U A A C C A C A SEQRES 4 A 75 U G A A G U A U A A C G A SEQRES 5 A 75 U G A C A A U G C C G A C SEQRES 6 A 75 C G U C U G G G C G HET K B 101 1 HET K B 102 1 HET MG B 103 1 HET MG B 104 1 HET MG B 105 1 HET MG B 106 1 HET UG4 B 107 15 HET K A 101 1 HET K A 102 1 HET MG A 103 1 HET MG A 104 1 HET MG A 105 1 HET MG A 106 1 HET UG4 A 107 15 HETNAM K POTASSIUM ION HETNAM MG MAGNESIUM ION HETNAM UG4 5-AMINO-1-(PYRIDIN-3-YL)-1H-IMIDAZOLE-4-CARBOXAMIDE FORMUL 3 K 4(K 1+) FORMUL 5 MG 8(MG 2+) FORMUL 9 UG4 2(C9 H9 N5 O) FORMUL 17 HOH *2(H2 O) LINK OP1 U B 16 MG MG B 103 1555 1555 2.07 LINK O3' G B 21 K K B 101 1555 1555 2.77 LINK O2' G B 21 K K B 101 1555 1555 2.96 LINK O3' G B 21 K K B 101 1555 6554 2.75 LINK O2' G B 21 K K B 101 1555 6554 2.83 LINK OP2 A B 22 K K B 101 1555 6554 3.43 LINK OP2 C B 35 MG MG B 103 1555 1555 2.11 LINK OP2 G B 41 MG MG B 104 1555 1555 2.77 LINK K K B 101 OP2 A A 22 6554 1555 2.81 LINK MG MG B 103 O06 UG4 B 107 1555 1555 2.67 LINK MG MG B 103 O HOH B 201 1555 1555 2.07 LINK OP1 U A 16 MG MG A 103 1555 1555 2.38 LINK OP2 C A 35 MG MG A 103 1555 1555 2.31 LINK O4 U A 68 K K A 102 1555 1555 3.14 SITE 1 AC1 4 G A 21 A A 22 G B 21 A B 22 SITE 1 AC2 2 G B 67 U B 68 SITE 1 AC3 4 U B 16 C B 35 UG4 B 107 HOH B 201 SITE 1 AC4 1 G B 41 SITE 1 AC5 2 U B 16 U B 40 SITE 1 AC6 2 A B 39 U B 40 SITE 1 AC7 9 U B 16 G B 17 A B 34 C B 35 SITE 2 AC7 9 G B 63 U B 70 G B 71 MG B 103 SITE 3 AC7 9 HOH B 201 SITE 1 AC8 1 G A 28 SITE 1 AC9 1 U A 68 SITE 1 AD1 3 U A 16 C A 35 UG4 A 107 SITE 1 AD2 2 G A 44 U A 45 SITE 1 AD3 1 G A 72 SITE 1 AD4 7 U A 16 G A 17 C A 35 G A 63 SITE 2 AD4 7 U A 70 G A 71 MG A 103 CRYST1 90.284 90.284 121.391 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011076 0.006395 0.000000 0.00000 SCALE2 0.000000 0.012790 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008238 0.00000