HEADER BLOOD CLOTTING 26-MAY-20 6X5L TITLE DISCOVERY OF HYDROXY PYRIMIDINE FACTOR IXA INHIBITORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: COAGULATION FACTOR IX; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CHRISTMAS FACTOR,PLASMA THROMBOPLASTIN COMPONENT,PTC; COMPND 5 EC: 3.4.21.22; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: COAGULATION FACTOR IX; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: CHRISTMAS FACTOR,PLASMA THROMBOPLASTIN COMPONENT,PTC; COMPND 11 EC: 3.4.21.22; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: F9; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: F9; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SERINE PROTEASE, ZYMOGEN, HYDROLASE, GLYCOPROTEIN, HYDROXYLATION, KEYWDS 2 PHOSPHOPROTEIN, SULFATION, HEMOSTASIS, HEMOPHILIA, XASE-LIKE KEYWDS 3 VARIANT, COMMUNICATION CHANNEL, GAMMA-CARBOXYGLUTAMIC ACID, EGF-LIKE KEYWDS 4 DOMAIN, DISEASE MUTATION, BLOOD CLOTTING EXPDTA X-RAY DIFFRACTION AUTHOR C.L.JAYNE,T.ANDREANI,T.CHAN,M.V.CHELLIAH,M.C.CLASBY,M.DWYER, AUTHOR 2 K.A.EAGEN,S.FRIED,W.J.GREENLEE,Z.GUO,B.HAWES,A.HRUZA,R.INGRAM, AUTHOR 3 K.M.KEERTIKAR,S.NEELAMKAVIL,P.REICHERT,Y.XIA,S.CHACKALAMANNIL REVDAT 1 24-JUN-20 6X5L 0 JRNL AUTH C.L.JAYNE,T.ANDREANI,T.Y.CHAN,M.V.CHELLIAH,M.C.CLASBY, JRNL AUTH 2 M.DWYER,K.A.EAGEN,S.FRIED,W.J.GREENLEE,Z.GUO,B.HAWES, JRNL AUTH 3 A.HRUZA,R.INGRAM,K.M.KEERTIKAR,S.NEELAMKAVIL,P.REICHERT, JRNL AUTH 4 Y.XIA,S.CHACKALAMANNIL JRNL TITL DISCOVERY OF HYDROXY PYRIMIDINE FACTOR IXA INHIBITORS. JRNL REF BIOORG.MED.CHEM.LETT. V. 30 27279 2020 JRNL REFN ESSN 1464-3405 JRNL PMID 32527459 JRNL DOI 10.1016/J.BMCL.2020.127279 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.73 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 24156 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1154 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.27 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 68.64 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2943 REMARK 3 BIN FREE R VALUE : 0.2985 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 25 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2199 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 89 REMARK 3 SOLVENT ATOMS : 131 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.02760 REMARK 3 B22 (A**2) : -3.02760 REMARK 3 B33 (A**2) : 6.05520 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.280 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.199 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.170 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.308 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.167 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4593 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 8268 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1361 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 780 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2364 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 292 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3432 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.00 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.83 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 13.82 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 31.0983 11.3661 18.2355 REMARK 3 T TENSOR REMARK 3 T11: -0.1483 T22: -0.046 REMARK 3 T33: -0.1095 T12: 0.0183 REMARK 3 T13: 0.0171 T23: 0.0314 REMARK 3 L TENSOR REMARK 3 L11: 1.6941 L22: 2.2057 REMARK 3 L33: 2.9039 L12: -0.0691 REMARK 3 L13: 0.9307 L23: -0.0192 REMARK 3 S TENSOR REMARK 3 S11: -0.0289 S12: 0.0387 S13: -0.1026 REMARK 3 S21: 0.0387 S22: -0.0404 S23: -0.192 REMARK 3 S31: -0.1026 S32: -0.192 S33: 0.0693 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 50.3433 16.6535 4.0408 REMARK 3 T TENSOR REMARK 3 T11: 0.0383 T22: 0.3517 REMARK 3 T33: 0.1595 T12: -0.1127 REMARK 3 T13: 0.1247 T23: 0.1843 REMARK 3 L TENSOR REMARK 3 L11: 11.0766 L22: 6.5002 REMARK 3 L33: 3.8723 L12: -4.5203 REMARK 3 L13: 0.2106 L23: -0.2941 REMARK 3 S TENSOR REMARK 3 S11: 0.2451 S12: -0.7072 S13: -0.1892 REMARK 3 S21: -0.7072 S22: -0.1915 S23: 0.7525 REMARK 3 S31: -0.1892 S32: 0.7525 S33: -0.0536 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6X5L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1000249613. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 5.2 - 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 V1.98.6 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 V1.98.6 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24249 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : 0.05700 REMARK 200 FOR THE DATA SET : 27.2630 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.3 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 0.48400 REMARK 200 R SYM FOR SHELL (I) : 0.48400 REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: AUTOBUSTER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CITRIC ACID, 20% PEG 6000, PH REMARK 280 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.10100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 50.28000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 50.28000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 73.65150 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 50.28000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 50.28000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 24.55050 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 50.28000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.28000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 73.65150 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 50.28000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.28000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 24.55050 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 49.10100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 60 REMARK 465 MET B 84 REMARK 465 ASP B 85 REMARK 465 SER B 102 REMARK 465 ALA B 103 REMARK 465 ASP B 104 REMARK 465 ASN B 105 REMARK 465 LYS B 106 REMARK 465 THR B 140 REMARK 465 SER B 141 REMARK 465 LYS B 142 REMARK 465 LEU B 143 REMARK 465 THR B 144 REMARK 465 ARG B 145 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR A 130 OD1 ASN B 92 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O5 CIT A 303 HO7 CIT A 304 3544 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 71 -64.39 -133.87 REMARK 500 ILE A 73 1.86 -67.53 REMARK 500 SER A 219 -75.28 -116.40 REMARK 500 GLU A 223 -161.02 66.95 REMARK 500 GLN B 97 -82.72 -115.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 70 OE1 REMARK 620 2 ASN A 72 O 82.5 REMARK 620 3 GLU A 75 O 168.5 87.9 REMARK 620 4 GLU A 77 OE1 96.1 93.0 90.7 REMARK 620 5 GLU A 80 OE1 93.3 172.2 96.9 80.8 REMARK 620 6 HOH A 484 O 82.4 99.1 92.9 167.5 86.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UQG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 308 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6X5J RELATED DB: PDB REMARK 900 RELATED ID: 6X5P RELATED DB: PDB DBREF 6X5L A 16 249 UNP P00740 FA9_HUMAN 227 460 DBREF 6X5L B 85 145 UNP P00740 FA9_HUMAN 131 191 SEQADV 6X5L MET B 84 UNP P00740 INITIATING METHIONINE SEQRES 1 A 234 VAL VAL GLY GLY GLU ASP ALA LYS PRO GLY GLN PHE PRO SEQRES 2 A 234 TRP GLN VAL VAL LEU ASN GLY LYS VAL ASP ALA PHE CYS SEQRES 3 A 234 GLY GLY SER ILE VAL ASN GLU LYS TRP ILE VAL THR ALA SEQRES 4 A 234 ALA HIS CYS VAL GLU THR GLY VAL LYS ILE THR VAL VAL SEQRES 5 A 234 ALA GLY GLU HIS ASN ILE GLU GLU THR GLU HIS THR GLU SEQRES 6 A 234 GLN LYS ARG ASN VAL ILE ARG ILE ILE PRO HIS HIS ASN SEQRES 7 A 234 TYR ASN ALA ALA ILE ASN LYS TYR ASN HIS ASP ILE ALA SEQRES 8 A 234 LEU LEU GLU LEU ASP GLU PRO LEU VAL LEU ASN SER TYR SEQRES 9 A 234 VAL THR PRO ILE CYS ILE ALA ASP LYS GLU TYR THR ASN SEQRES 10 A 234 ILE PHE LEU LYS PHE GLY SER GLY TYR VAL SER GLY TRP SEQRES 11 A 234 GLY ARG VAL PHE HIS LYS GLY ARG SER ALA LEU VAL LEU SEQRES 12 A 234 GLN TYR LEU ARG VAL PRO LEU VAL ASP ARG ALA THR CYS SEQRES 13 A 234 LEU ARG SER THR LYS PHE THR ILE TYR ASN ASN MET PHE SEQRES 14 A 234 CYS ALA GLY PHE HIS GLU GLY GLY ARG ASP SER CYS GLN SEQRES 15 A 234 GLY ASP SER GLY GLY PRO HIS VAL THR GLU VAL GLU GLY SEQRES 16 A 234 THR SER PHE LEU THR GLY ILE ILE SER TRP GLY GLU GLU SEQRES 17 A 234 CYS ALA MET LYS GLY LYS TYR GLY ILE TYR THR LYS VAL SEQRES 18 A 234 SER ARG TYR VAL ASN TRP ILE LYS GLU LYS THR LYS LEU SEQRES 1 B 62 MET ASP VAL THR CYS ASN ILE LYS ASN GLY ARG CYS GLU SEQRES 2 B 62 GLN PHE CYS LYS ASN SER ALA ASP ASN LYS VAL VAL CYS SEQRES 3 B 62 SER CYS THR GLU GLY TYR ARG LEU ALA GLU ASN GLN LYS SEQRES 4 B 62 SER CYS GLU PRO ALA VAL PRO PHE PRO CYS GLY ARG VAL SEQRES 5 B 62 SER VAL SER GLN THR SER LYS LEU THR ARG HET UQG A 301 42 HET NA A 302 1 HET CIT A 303 18 HET CIT A 304 18 HET CIT A 305 18 HET CIT A 306 18 HET GOL A 307 14 HET GOL A 308 14 HETNAM UQG 4-{[5-HYDROXY-6-(4-METHYLPHENYL)PYRIMIDIN-4- HETNAM 2 UQG YL]AMINO}BENZENE-1-CARBOXIMIDAMIDE HETNAM NA SODIUM ION HETNAM CIT CITRIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 UQG C18 H17 N5 O FORMUL 4 NA NA 1+ FORMUL 5 CIT 4(C6 H8 O7) FORMUL 9 GOL 2(C3 H8 O3) FORMUL 11 HOH *131(H2 O) HELIX 1 AA1 ALA A 54 VAL A 58 5 5 HELIX 2 AA2 ASP A 127 PHE A 137 1 11 HELIX 3 AA3 ASP A 167 SER A 174 1 8 HELIX 4 AA4 TYR A 239 LYS A 248 1 10 HELIX 5 AA5 ILE B 90 CYS B 95 5 6 SHEET 1 AA1 8 GLU A 20 ASP A 21 0 SHEET 2 AA1 8 GLN A 159 VAL A 166 -1 O TYR A 160 N GLU A 20 SHEET 3 AA1 8 MET A 183 ALA A 186 -1 O CYS A 185 N VAL A 166 SHEET 4 AA1 8 GLY A 231 LYS A 235 -1 O TYR A 233 N PHE A 184 SHEET 5 AA1 8 THR A 211 TRP A 220 -1 N TRP A 220 O ILE A 232 SHEET 6 AA1 8 PRO A 203 VAL A 208 -1 N VAL A 208 O THR A 211 SHEET 7 AA1 8 SER A 139 GLY A 144 -1 N TYR A 141 O VAL A 205 SHEET 8 AA1 8 GLN A 159 VAL A 166 -1 O VAL A 163 N GLY A 140 SHEET 1 AA2 7 GLN A 30 ASN A 34 0 SHEET 2 AA2 7 CYS A 41 ASN A 47 -1 O CYS A 41 N LEU A 33 SHEET 3 AA2 7 TRP A 50 THR A 53 -1 O VAL A 52 N SER A 44 SHEET 4 AA2 7 ALA A 106 LEU A 110 -1 O ALA A 106 N THR A 53 SHEET 5 AA2 7 GLN A 81 PRO A 90 -1 N ILE A 89 O LEU A 107 SHEET 6 AA2 7 THR A 65 ALA A 68 -1 N ALA A 68 O GLN A 81 SHEET 7 AA2 7 GLN A 30 ASN A 34 -1 N ASN A 34 O THR A 65 SHEET 1 AA3 2 PHE B 98 LYS B 100 0 SHEET 2 AA3 2 VAL B 108 SER B 110 -1 O SER B 110 N PHE B 98 SHEET 1 AA4 2 TYR B 115 LEU B 117 0 SHEET 2 AA4 2 CYS B 124 PRO B 126 -1 O GLU B 125 N ARG B 116 SSBOND 1 CYS A 41 CYS A 57 1555 1555 2.05 SSBOND 2 CYS A 124 CYS B 132 1555 1555 2.05 SSBOND 3 CYS A 171 CYS A 185 1555 1555 2.02 SSBOND 4 CYS A 196 CYS A 224 1555 1555 2.06 SSBOND 5 CYS B 88 CYS B 99 1555 1555 2.04 SSBOND 6 CYS B 95 CYS B 109 1555 1555 2.03 SSBOND 7 CYS B 111 CYS B 124 1555 1555 2.05 LINK OE1 GLU A 70 NA NA A 302 1555 1555 2.24 LINK O ASN A 72 NA NA A 302 1555 1555 2.36 LINK O GLU A 75 NA NA A 302 1555 1555 2.25 LINK OE1 GLU A 77 NA NA A 302 1555 1555 2.57 LINK OE1 GLU A 80 NA NA A 302 1555 1555 2.39 LINK NA NA A 302 O HOH A 484 1555 1555 2.52 SITE 1 AC1 15 HIS A 56 LYS A 100 TYR A 101 ASP A 194 SITE 2 AC1 15 SER A 195 CYS A 196 GLN A 197 SER A 200 SITE 3 AC1 15 SER A 219 TRP A 220 GLY A 221 GLU A 223 SITE 4 AC1 15 CYS A 224 GLY A 231 HOH A 416 SITE 1 AC2 6 GLU A 70 ASN A 72 GLU A 75 GLU A 77 SITE 2 AC2 6 GLU A 80 HOH A 484 SITE 1 AC3 10 HIS A 103 TYR A 180 ASN A 181 ASN A 182 SITE 2 AC3 10 HIS A 189 GLU A 190 LYS A 227 ARG A 238 SITE 3 AC3 10 CIT A 304 HOH A 412 SITE 1 AC4 8 ASN A 181 ASN A 182 HIS A 189 LYS A 227 SITE 2 AC4 8 CIT A 303 HOH A 420 HOH A 454 HOH A 510 SITE 1 AC5 12 HIS A 91 HIS A 92 PHE A 188 HIS A 189 SITE 2 AC5 12 ARG A 238 TYR A 239 ASN A 241 TRP A 242 SITE 3 AC5 12 HOH A 401 HOH A 424 HOH A 437 HOH A 438 SITE 1 AC6 7 ARG A 147 HIS A 150 LYS A 151 CYS A 196 SITE 2 AC6 7 GLN A 197 GLU A 223 CYS A 224 SITE 1 AC7 5 ASN A 99 TYR A 101 PHE A 177 THR A 178 SITE 2 AC7 5 TRP A 220 SITE 1 AC8 7 ASN A 93 ASN A 95 ILE A 98 ASN A 99 SITE 2 AC8 7 ASN A 102 HIS A 103 HOH A 413 CRYST1 100.560 100.560 98.202 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009944 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009944 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010183 0.00000