HEADER TRANSFERASE 30-MAY-20 6X7R
TITLE E. COLI BETA-KETOACYL-[ACYL CARRIER PROTEIN] SYNTHASE III (FABH) IN
TITLE 2 COMPLEX WITH OXA(DETHIA)-COENZYME A
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 3;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III,BETA-KETOACYL-
COMPND 5 ACP SYNTHASE III,KAS III,ECFABH;
COMPND 6 EC: 2.3.1.180;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI STR. K-12 SUBSTR. DH10B;
SOURCE 3 ORGANISM_TAXID: 316385;
SOURCE 4 STRAIN: K12;
SOURCE 5 VARIANT: DH10B;
SOURCE 6 GENE: FABH, B1091, JW1077;
SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRSF
KEYWDS KETOACYL SYNTHASE, SUBSTRATE ANALOG, TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR A.B.BENJAMIN,L.M.STUNKARD,J.LING,J.N.NICE,J.R.LOHMAN
REVDAT 4 25-OCT-23 6X7R 1 REMARK
REVDAT 3 08-MAR-23 6X7R 1 JRNL
REVDAT 2 15-JUN-22 6X7R 1 COMPND SOURCE REMARK DBREF
REVDAT 2 2 1 SEQADV SEQRES HELIX SHEET
REVDAT 2 3 1 SITE ATOM
REVDAT 1 02-JUN-21 6X7R 0
JRNL AUTH A.B.BENJAMIN,L.M.STUNKARD,J.LING,J.N.NICE,J.R.LOHMAN
JRNL TITL STRUCTURES OF CHLORAMPHENICOL ACETYLTRANSFERASE III AND
JRNL TITL 2 ESCHERICHIA COLI BETA-KETO-ACYLSYNTHASE III CO-CRYSTALLIZED
JRNL TITL 3 WITH PARTIALLY HYDROLYSED ACETYL-OXA(DE-THIA)COA
JRNL REF ACTA CRYSTALLOGR.,SECT.F 61 2023
JRNL REFN ESSN 2053-230X
JRNL DOI 10.1107/S2053230X23001206
REMARK 2
REMARK 2 RESOLUTION. 1.35 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.8.0258
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.59
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7
REMARK 3 NUMBER OF REFLECTIONS : 57495
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.146
REMARK 3 R VALUE (WORKING SET) : 0.145
REMARK 3 FREE R VALUE : 0.176
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT : 3041
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : NULL
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.35
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.38
REMARK 3 REFLECTION IN BIN (WORKING SET) : 4027
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.28
REMARK 3 BIN R VALUE (WORKING SET) : 0.2250
REMARK 3 BIN FREE R VALUE SET COUNT : 232
REMARK 3 BIN FREE R VALUE : 0.2740
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2355
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 53
REMARK 3 SOLVENT ATOMS : 401
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 20.81
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.81
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -1.19000
REMARK 3 B22 (A**2) : -1.19000
REMARK 3 B33 (A**2) : 2.38000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.050
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.054
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.039
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.976
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.982
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.973
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2533 ; 0.012 ; 0.013
REMARK 3 BOND LENGTHS OTHERS (A): 2391 ; 0.001 ; 0.017
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3478 ; 1.909 ; 1.668
REMARK 3 BOND ANGLES OTHERS (DEGREES): 5533 ; 1.572 ; 1.587
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 340 ; 6.506 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 114 ;34.136 ;22.105
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 407 ;12.373 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;15.713 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 357 ; 0.093 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2861 ; 0.009 ; 0.020
REMARK 3 GENERAL PLANES OTHERS (A): 512 ; 0.002 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY
REMARK 4
REMARK 4 6X7R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUN-20.
REMARK 100 THE DEPOSITION ID IS D_1000249735.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 29-JUN-19
REMARK 200 TEMPERATURE (KELVIN) : 80
REMARK 200 PH : 7.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 21-ID-G
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856
REMARK 200 MONOCHROMATOR : DIAMOND(111)
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : SCALEPACK
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60608
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0
REMARK 200 DATA REDUNDANCY : 13.90
REMARK 200 R MERGE (I) : 0.08500
REMARK 200 R SYM (I) : 0.07100
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 130.4000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.40
REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0
REMARK 200 DATA REDUNDANCY IN SHELL : 13.70
REMARK 200 R MERGE FOR SHELL (I) : 0.76800
REMARK 200 R SYM FOR SHELL (I) : 0.64400
REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.700
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER 2.8.3
REMARK 200 STARTING MODEL: PDB ENTRY 1HNJ
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 39.20
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 75 MM MAGNESIUM CHLORIDE, 100 MM
REMARK 280 HEPES:NAOH, PH 7.5, 23% PEG3350, 1.5% DMSO, VAPOR DIFFUSION,
REMARK 280 HANGING DROP, TEMPERATURE 298K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4
REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4
REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4
REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4
REMARK 290 7555 Y,X,-Z
REMARK 290 8555 -Y,-X,-Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.43400
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 36.31450
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 36.31450
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.71700
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 36.31450
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 36.31450
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 77.15100
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 36.31450
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.31450
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 25.71700
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 36.31450
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.31450
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 77.15100
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 51.43400
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 5220 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 21800 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 72.62900
REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 72.62900
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 51.43400
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 HOH A 796 LIES ON A SPECIAL POSITION.
REMARK 375 HOH A 898 LIES ON A SPECIAL POSITION.
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 SER A -2
REMARK 465 GLY A -1
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 ARG A 42 CG - CD - NE ANGL. DEV. = 12.9 DEGREES
REMARK 500 ARG A 249 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 SER A 82 31.41 -144.41
REMARK 500 ALA A 110 37.31 -146.63
REMARK 500 ALA A 111 -138.47 48.76
REMARK 500 VAL A 141 51.32 -116.44
REMARK 500 SER A 276 -127.95 58.03
REMARK 500
REMARK 500 REMARK: NULL
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE
REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 525
REMARK 525 M RES CSSEQI
REMARK 525 HOH A 901 DISTANCE = 5.88 ANGSTROMS
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A 402 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HOH A 570 O
REMARK 620 2 HOH A 695 O 83.4
REMARK 620 3 HOH A 836 O 94.7 97.8
REMARK 620 4 HOH A 847 O 93.2 175.9 84.6
REMARK 620 5 HOH A 861 O 172.6 92.3 91.8 90.9
REMARK 620 6 HOH A 867 O 85.3 90.8 171.4 86.7 88.8
REMARK 620 N 1 2 3 4 5
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue UT7 A 401
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 402
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 403
DBREF 6X7R A 1 317 UNP P0A6R0 FABH_ECOLI 1 317
SEQADV 6X7R SER A -2 UNP P0A6R0 EXPRESSION TAG
SEQADV 6X7R GLY A -1 UNP P0A6R0 EXPRESSION TAG
SEQADV 6X7R GLY A 0 UNP P0A6R0 EXPRESSION TAG
SEQRES 1 A 320 SER GLY GLY MET TYR THR LYS ILE ILE GLY THR GLY SER
SEQRES 2 A 320 TYR LEU PRO GLU GLN VAL ARG THR ASN ALA ASP LEU GLU
SEQRES 3 A 320 LYS MET VAL ASP THR SER ASP GLU TRP ILE VAL THR ARG
SEQRES 4 A 320 THR GLY ILE ARG GLU ARG HIS ILE ALA ALA PRO ASN GLU
SEQRES 5 A 320 THR VAL SER THR MET GLY PHE GLU ALA ALA THR ARG ALA
SEQRES 6 A 320 ILE GLU MET ALA GLY ILE GLU LYS ASP GLN ILE GLY LEU
SEQRES 7 A 320 ILE VAL VAL ALA THR THR SER ALA THR HIS ALA PHE PRO
SEQRES 8 A 320 SER ALA ALA CYS GLN ILE GLN SER MET LEU GLY ILE LYS
SEQRES 9 A 320 GLY CYS PRO ALA PHE ASP VAL ALA ALA ALA CYS ALA GLY
SEQRES 10 A 320 PHE THR TYR ALA LEU SER VAL ALA ASP GLN TYR VAL LYS
SEQRES 11 A 320 SER GLY ALA VAL LYS TYR ALA LEU VAL VAL GLY SER ASP
SEQRES 12 A 320 VAL LEU ALA ARG THR CYS ASP PRO THR ASP ARG GLY THR
SEQRES 13 A 320 ILE ILE ILE PHE GLY ASP GLY ALA GLY ALA ALA VAL LEU
SEQRES 14 A 320 ALA ALA SER GLU GLU PRO GLY ILE ILE SER THR HIS LEU
SEQRES 15 A 320 HIS ALA ASP GLY SER TYR GLY GLU LEU LEU THR LEU PRO
SEQRES 16 A 320 ASN ALA ASP ARG VAL ASN PRO GLU ASN SER ILE HIS LEU
SEQRES 17 A 320 THR MET ALA GLY ASN GLU VAL PHE LYS VAL ALA VAL THR
SEQRES 18 A 320 GLU LEU ALA HIS ILE VAL ASP GLU THR LEU ALA ALA ASN
SEQRES 19 A 320 ASN LEU ASP ARG SER GLN LEU ASP TRP LEU VAL PRO HIS
SEQRES 20 A 320 GLN ALA ASN LEU ARG ILE ILE SER ALA THR ALA LYS LYS
SEQRES 21 A 320 LEU GLY MET SER MET ASP ASN VAL VAL VAL THR LEU ASP
SEQRES 22 A 320 ARG HIS GLY ASN THR SER ALA ALA SER VAL PRO CYS ALA
SEQRES 23 A 320 LEU ASP GLU ALA VAL ARG ASP GLY ARG ILE LYS PRO GLY
SEQRES 24 A 320 GLN LEU VAL LEU LEU GLU ALA PHE GLY GLY GLY PHE THR
SEQRES 25 A 320 TRP GLY SER ALA LEU VAL ARG PHE
HET UT7 A 401 48
HET MG A 402 1
HET DMS A 403 4
HETNAM UT7 OXA(DETHIA)-COA
HETNAM MG MAGNESIUM ION
HETNAM DMS DIMETHYL SULFOXIDE
HETSYN UT7 [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-
HETSYN 2 UT7 (PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-
HETSYN 3 UT7 HYDROXY-4-({3-[(2-HYDROXYETHYL)AMINO]-3-
HETSYN 4 UT7 OXOPROPYL}AMINO)-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN
HETSYN 5 UT7 DIPHOSPHATE
FORMUL 2 UT7 C21 H36 N7 O17 P3
FORMUL 3 MG MG 2+
FORMUL 4 DMS C2 H6 O S
FORMUL 5 HOH *401(H2 O)
HELIX 1 AA1 ASN A 19 LYS A 24 1 6
HELIX 2 AA2 SER A 29 GLY A 38 1 10
HELIX 3 AA3 THR A 50 GLY A 67 1 18
HELIX 4 AA4 GLU A 69 ILE A 73 5 5
HELIX 5 AA5 SER A 89 LEU A 98 1 10
HELIX 6 AA6 ALA A 110 CYS A 112 5 3
HELIX 7 AA7 ALA A 113 SER A 128 1 16
HELIX 8 AA8 VAL A 141 CYS A 146 1 6
HELIX 9 AA9 ASP A 150 ILE A 155 1 6
HELIX 10 AB1 GLY A 183 GLU A 187 5 5
HELIX 11 AB2 ALA A 208 ASN A 231 1 24
HELIX 12 AB3 ASP A 234 LEU A 238 5 5
HELIX 13 AB4 ASN A 247 LEU A 258 1 12
HELIX 14 AB5 SER A 261 VAL A 265 5 5
HELIX 15 AB6 THR A 268 GLY A 273 1 6
HELIX 16 AB7 THR A 275 ALA A 277 5 3
HELIX 17 AB8 ALA A 278 ASP A 290 1 13
SHEET 1 AA1 5 TYR A 2 TYR A 11 0
SHEET 2 AA1 5 GLY A 160 SER A 169 -1 O SER A 169 N TYR A 2
SHEET 3 AA1 5 TYR A 133 ASP A 140 -1 N ALA A 134 O LEU A 166
SHEET 4 AA1 5 LEU A 75 ALA A 79 1 N ALA A 79 O VAL A 137
SHEET 5 AA1 5 ALA A 105 VAL A 108 1 O VAL A 108 N VAL A 78
SHEET 1 AA2 2 GLN A 15 THR A 18 0
SHEET 2 AA2 2 GLU A 41 ILE A 44 -1 O ARG A 42 N ARG A 17
SHEET 1 AA3 4 ILE A 174 ALA A 181 0
SHEET 2 AA3 4 THR A 309 ARG A 316 -1 O TRP A 310 N HIS A 180
SHEET 3 AA3 4 LEU A 298 GLY A 305 -1 N VAL A 299 O VAL A 315
SHEET 4 AA3 4 TRP A 240 PRO A 243 1 N VAL A 242 O LEU A 300
SHEET 1 AA4 2 LEU A 189 THR A 190 0
SHEET 2 AA4 2 THR A 206 MET A 207 -1 O THR A 206 N THR A 190
LINK MG MG A 402 O HOH A 570 1555 1555 2.15
LINK MG MG A 402 O HOH A 695 1555 1555 2.19
LINK MG MG A 402 O HOH A 836 1555 5545 2.18
LINK MG MG A 402 O HOH A 847 1555 4554 2.19
LINK MG MG A 402 O HOH A 861 1555 5545 2.16
LINK MG MG A 402 O HOH A 867 1555 4554 2.13
CISPEP 1 PHE A 87 PRO A 88 0 -8.29
CISPEP 2 PRO A 172 GLY A 173 0 -2.09
CISPEP 3 GLY A 307 PHE A 308 0 -0.76
SITE 1 AC1 34 THR A 28 TRP A 32 ARG A 36 THR A 37
SITE 2 AC1 34 CYS A 112 ARG A 151 ILE A 155 ILE A 156
SITE 3 AC1 34 LEU A 189 MET A 207 GLY A 209 ASN A 210
SITE 4 AC1 34 VAL A 212 HIS A 244 ASN A 247 ARG A 249
SITE 5 AC1 34 ILE A 250 ASN A 274 PHE A 304 HOH A 503
SITE 6 AC1 34 HOH A 526 HOH A 529 HOH A 535 HOH A 549
SITE 7 AC1 34 HOH A 566 HOH A 570 HOH A 631 HOH A 667
SITE 8 AC1 34 HOH A 686 HOH A 700 HOH A 706 HOH A 727
SITE 9 AC1 34 HOH A 743 HOH A 775
SITE 1 AC2 6 HOH A 570 HOH A 695 HOH A 836 HOH A 847
SITE 2 AC2 6 HOH A 861 HOH A 867
SITE 1 AC3 4 HIS A 178 LEU A 179 HOH A 555 HOH A 603
CRYST1 72.629 72.629 102.868 90.00 90.00 90.00 P 41 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.013769 0.000000 0.000000 0.00000
SCALE2 0.000000 0.013769 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009721 0.00000