HEADER VIRAL PROTEIN/IMMUNE SYSTEM 03-JUN-20 6X9S TITLE HIV-1 ENVELOPE GLYCOPROTEIN BG505 SOSIP.664 EXPRESSED IN STABLE CHO TITLE 2 CELLS IN COMPLEX WITH RM20A3 FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: HIV-1 ENVELOPE GLYCOPROTEIN BG505 SOSIP.664 GP120; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 30-505; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HIV-1 ENVELOPE GLYCOPROTEIN BG505 SOSIP.664 GP41; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: RM20A3 FAB HEAVY CHAIN; COMPND 14 CHAIN: H; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: RM20A3 FAB LIGHT CHAIN; COMPND 18 CHAIN: L; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 3 ORGANISM_COMMON: HIV-1; SOURCE 4 ORGANISM_TAXID: 11676; SOURCE 5 GENE: ENV; SOURCE 6 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: CHO; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 12 ORGANISM_COMMON: HIV-1; SOURCE 13 ORGANISM_TAXID: 11676; SOURCE 14 GENE: ENV; SOURCE 15 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 16 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 18 EXPRESSION_SYSTEM_CELL_LINE: CHO; SOURCE 19 MOL_ID: 3; SOURCE 20 ORGANISM_SCIENTIFIC: MACACA MULATTA; SOURCE 21 ORGANISM_COMMON: RHESUS MONKEY; SOURCE 22 ORGANISM_TAXID: 9544; SOURCE 23 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 24 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 26 MOL_ID: 4; SOURCE 27 ORGANISM_SCIENTIFIC: MACACA MULATTA; SOURCE 28 ORGANISM_COMMON: RHESUS MONKEY; SOURCE 29 ORGANISM_TAXID: 9544; SOURCE 30 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 31 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 32 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS HIV-1, ENVELOPE, GLYCOPROTEIN, SPIKE, VACCINE, VIRAL PROTEIN-IMMUNE KEYWDS 2 SYSTEM COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR Z.T.BERNDSEN,A.B.WARD REVDAT 3 13-NOV-24 6X9S 1 REMARK REVDAT 2 25-NOV-20 6X9S 1 JRNL REVDAT 1 04-NOV-20 6X9S 0 JRNL AUTH Z.T.BERNDSEN,S.CHAKRABORTY,X.WANG,C.A.COTTRELL,J.L.TORRES, JRNL AUTH 2 J.K.DIEDRICH,C.A.LOPEZ,J.R.YATES 3RD,M.J.VAN GILS, JRNL AUTH 3 J.C.PAULSON,S.GNANAKARAN,A.B.WARD JRNL TITL VISUALIZATION OF THE HIV-1 ENV GLYCAN SHIELD ACROSS SCALES. JRNL REF PROC.NATL.ACAD.SCI.USA V. 117 28014 2020 JRNL REFN ESSN 1091-6490 JRNL PMID 33093196 JRNL DOI 10.1073/PNAS.2000260117 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : LEGINON, UCSF CHIMERA, ROSETTA, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.100 REMARK 3 NUMBER OF PARTICLES : 67028 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6X9S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1000249542. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HIV-1 ENVELOPE GLYCOPROTEIN REMARK 245 BG505 SOSIP.664 EXPRESSED IN REMARK 245 STABLE CHO CELLS IN COMPLEX REMARK 245 WITH RM20A3 FAB; HIV-1 ENVELOPE REMARK 245 GLYCOPROTEIN BG505 SOSIP.664; REMARK 245 RM20A3 FAB REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 7.00 REMARK 245 SAMPLE SUPPORT DETAILS : UNSPECIFIED REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.60 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : DARK FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 CYCLIC POINT SYMMETRY (SCHOENFLIES SYMBOL = C3). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, H, L, C, D, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000184 341.15410 REMARK 350 BIOMT2 2 0.866025 -0.500000 -0.000311 91.45715 REMARK 350 BIOMT3 2 0.000361 0.000004 1.000000 -0.05270 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000361 91.37284 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000004 341.17669 REMARK 350 BIOMT3 3 0.000184 -0.000311 1.000000 0.01820 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -4 REMARK 465 ASP A -3 REMARK 465 ALA A -2 REMARK 465 MET A -1 REMARK 465 LYS A 0 REMARK 465 ARG A 1 REMARK 465 GLY A 2 REMARK 465 LEU A 3 REMARK 465 CYS A 4 REMARK 465 CYS A 5 REMARK 465 VAL A 6 REMARK 465 LEU A 7 REMARK 465 LEU A 8 REMARK 465 LEU A 9 REMARK 465 CYS A 10 REMARK 465 GLY A 11 REMARK 465 ALA A 12 REMARK 465 VAL A 13 REMARK 465 PHE A 14 REMARK 465 VAL A 15 REMARK 465 SER A 16 REMARK 465 PRO A 17 REMARK 465 SER A 18 REMARK 465 GLN A 19 REMARK 465 GLU A 20 REMARK 465 ILE A 21 REMARK 465 HIS A 22 REMARK 465 ALA A 23 REMARK 465 ARG A 24 REMARK 465 PHE A 25 REMARK 465 ARG A 26 REMARK 465 ARG A 27 REMARK 465 GLY A 28 REMARK 465 ALA A 29 REMARK 465 ARG A 30 REMARK 465 ALA A 31 REMARK 465 GLU A 32 REMARK 465 ASN A 33 REMARK 465 LEU A 34 REMARK 465 ALA A 58 REMARK 465 LYS A 59 REMARK 465 ALA A 60 REMARK 465 TYR A 61 REMARK 465 GLU A 62 REMARK 465 THR A 63 REMARK 465 GLU A 64 REMARK 465 LYS A 65 REMARK 465 GLU A 185A REMARK 465 ASN A 185B REMARK 465 GLN A 185C REMARK 465 GLY A 185D REMARK 465 ASN A 185E REMARK 465 ARG A 185F REMARK 465 SER A 185G REMARK 465 ASN A 185H REMARK 465 ASN A 185I REMARK 465 SER A 398 REMARK 465 ASN A 399 REMARK 465 THR A 400 REMARK 465 SER A 401 REMARK 465 VAL A 402 REMARK 465 GLN A 403 REMARK 465 GLY A 404 REMARK 465 SER A 405 REMARK 465 ASN A 406 REMARK 465 SER A 407 REMARK 465 THR A 408 REMARK 465 GLY A 409 REMARK 465 SER A 410 REMARK 465 ASN A 411 REMARK 465 GLY A 459 REMARK 465 SER A 460 REMARK 465 THR A 461 REMARK 465 ASN A 462 REMARK 465 ARG A 504 REMARK 465 VAL A 505 REMARK 465 VAL A 506 REMARK 465 GLY A 507 REMARK 465 ARG A 508 REMARK 465 ARG A 509 REMARK 465 ARG A 510 REMARK 465 ARG A 511 REMARK 465 ARG A 512 REMARK 465 ARG A 513 REMARK 465 ALA B 512 REMARK 465 VAL B 513 REMARK 465 GLY B 514 REMARK 465 ILE B 515 REMARK 465 GLY B 516 REMARK 465 ALA B 517 REMARK 465 VAL B 518 REMARK 465 SER B 546 REMARK 465 GLY B 547 REMARK 465 ILE B 548 REMARK 465 VAL B 549 REMARK 465 GLN B 550 REMARK 465 GLN B 551 REMARK 465 GLN B 552 REMARK 465 SER B 553 REMARK 465 ASN B 554 REMARK 465 LEU B 555 REMARK 465 LEU B 556 REMARK 465 ARG B 557 REMARK 465 ALA B 558 REMARK 465 PRO B 559 REMARK 465 GLU B 560 REMARK 465 ALA B 561 REMARK 465 GLN B 562 REMARK 465 GLN B 563 REMARK 465 HIS B 564 REMARK 465 LEU B 565 REMARK 465 LEU B 566 REMARK 465 LYS B 567 REMARK 465 ALA B 662 REMARK 465 LEU B 663 REMARK 465 ASP B 664 REMARK 465 SER H 113 REMARK 465 GLY L 108 REMARK 465 GLN L 109 REMARK 465 PRO L 110 REMARK 465 LYS L 111 REMARK 465 ALA L 112 REMARK 465 SER L 113 REMARK 465 PRO L 114 REMARK 465 THR L 115 REMARK 465 VAL L 116 REMARK 465 THR L 117 REMARK 465 LEU L 118 REMARK 465 PHE L 119 REMARK 465 PRO L 120 REMARK 465 PRO L 121 REMARK 465 SER L 122 REMARK 465 SER L 123 REMARK 465 GLU L 124 REMARK 465 GLU L 125 REMARK 465 LEU L 126 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL A 42 CB VAL A 42 CG1 -0.133 REMARK 500 PHE B 522 CB PHE B 522 CG -0.106 REMARK 500 GLU B 634 CD GLU B 634 OE1 -0.069 REMARK 500 TYR H 100G CG TYR H 100G CD1 -0.103 REMARK 500 TYR H 100G CD1 TYR H 100G CE1 -0.091 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 166 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 TYR A 173 CB - CG - CD2 ANGL. DEV. = -3.7 DEGREES REMARK 500 TYR A 217 CB - CG - CD1 ANGL. DEV. = -4.2 DEGREES REMARK 500 PRO A 240 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 ARG A 273 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 298 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG A 469 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG A 500 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG L 54 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 69 -100.54 -97.82 REMARK 500 THR A 71 -111.89 -121.45 REMARK 500 LYS A 207 -15.36 -152.63 REMARK 500 GLN A 258 -61.48 64.26 REMARK 500 PHE A 391 75.28 -116.18 REMARK 500 ASN A 392 76.22 -151.60 REMARK 500 TRP A 395 -110.82 59.39 REMARK 500 SER A 413 149.31 87.82 REMARK 500 TRP A 427 -128.45 56.53 REMARK 500 MET B 535 -4.91 -141.14 REMARK 500 SER B 615 106.83 -169.41 REMARK 500 LYS H 43 -131.70 -130.09 REMARK 500 SER H 82B -57.49 76.37 REMARK 500 LEU H 82C 128.77 62.39 REMARK 500 MET H 97 -125.79 -115.50 REMARK 500 LEU H 100A 14.34 -154.42 REMARK 500 LYS H 100E -70.52 -113.80 REMARK 500 GLN L 6 60.88 -177.47 REMARK 500 ASP L 27B -106.64 -166.97 REMARK 500 ASP L 50 -112.41 59.28 REMARK 500 SER L 76 -91.90 -90.42 REMARK 500 GLN L 95 -60.53 81.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-22109 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-22108 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-22110 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-22111 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-22112 RELATED DB: EMDB DBREF 6X9S A 31 508 UNP Q2N0S6 Q2N0S6_9HIV1 30 505 DBREF 6X9S B 512 664 UNP Q2N0S6 Q2N0S6_9HIV1 509 661 DBREF 6X9S H 1 113 PDB 6X9S 6X9S 1 113 DBREF 6X9S L 3 126 PDB 6X9S 6X9S 3 126 SEQADV 6X9S MET A -4 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S ASP A -3 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S ALA A -2 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S MET A -1 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S LYS A 0 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S ARG A 1 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S GLY A 2 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S LEU A 3 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S CYS A 4 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S CYS A 5 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S VAL A 6 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S LEU A 7 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S LEU A 8 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S LEU A 9 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S CYS A 10 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S GLY A 11 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S ALA A 12 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S VAL A 13 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S PHE A 14 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S VAL A 15 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S SER A 16 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S PRO A 17 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S SER A 18 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S GLN A 19 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S GLU A 20 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S ILE A 21 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S HIS A 22 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S ALA A 23 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S ARG A 24 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S PHE A 25 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S ARG A 26 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S ARG A 27 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S GLY A 28 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S ALA A 29 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S ARG A 30 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S ASN A 332 UNP Q2N0S6 THR 330 ENGINEERED MUTATION SEQADV 6X9S CYS A 501 UNP Q2N0S6 ALA 498 ENGINEERED MUTATION SEQADV 6X9S ARG A 509 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S ARG A 510 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S ARG A 511 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S ARG A 512 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S ARG A 513 UNP Q2N0S6 EXPRESSION TAG SEQADV 6X9S PRO B 559 UNP Q2N0S6 ILE 556 ENGINEERED MUTATION SEQADV 6X9S CYS B 605 UNP Q2N0S6 THR 602 ENGINEERED MUTATION SEQRES 1 A 516 MET ASP ALA MET LYS ARG GLY LEU CYS CYS VAL LEU LEU SEQRES 2 A 516 LEU CYS GLY ALA VAL PHE VAL SER PRO SER GLN GLU ILE SEQRES 3 A 516 HIS ALA ARG PHE ARG ARG GLY ALA ARG ALA GLU ASN LEU SEQRES 4 A 516 TRP VAL THR VAL TYR TYR GLY VAL PRO VAL TRP LYS ASP SEQRES 5 A 516 ALA GLU THR THR LEU PHE CYS ALA SER ASP ALA LYS ALA SEQRES 6 A 516 TYR GLU THR GLU LYS HIS ASN VAL TRP ALA THR HIS ALA SEQRES 7 A 516 CYS VAL PRO THR ASP PRO ASN PRO GLN GLU ILE HIS LEU SEQRES 8 A 516 GLU ASN VAL THR GLU GLU PHE ASN MET TRP LYS ASN ASN SEQRES 9 A 516 MET VAL GLU GLN MET HIS THR ASP ILE ILE SER LEU TRP SEQRES 10 A 516 ASP GLN SER LEU LYS PRO CYS VAL LYS LEU THR PRO LEU SEQRES 11 A 516 CYS VAL THR LEU GLN CYS THR ASN VAL THR ASN ASN ILE SEQRES 12 A 516 THR ASP ASP MET ARG GLY GLU LEU LYS ASN CYS SER PHE SEQRES 13 A 516 ASN MET THR THR GLU LEU ARG ASP LYS LYS GLN LYS VAL SEQRES 14 A 516 TYR SER LEU PHE TYR ARG LEU ASP VAL VAL GLN ILE ASN SEQRES 15 A 516 GLU ASN GLN GLY ASN ARG SER ASN ASN SER ASN LYS GLU SEQRES 16 A 516 TYR ARG LEU ILE ASN CYS ASN THR SER ALA ILE THR GLN SEQRES 17 A 516 ALA CYS PRO LYS VAL SER PHE GLU PRO ILE PRO ILE HIS SEQRES 18 A 516 TYR CYS ALA PRO ALA GLY PHE ALA ILE LEU LYS CYS LYS SEQRES 19 A 516 ASP LYS LYS PHE ASN GLY THR GLY PRO CYS PRO SER VAL SEQRES 20 A 516 SER THR VAL GLN CYS THR HIS GLY ILE LYS PRO VAL VAL SEQRES 21 A 516 SER THR GLN LEU LEU LEU ASN GLY SER LEU ALA GLU GLU SEQRES 22 A 516 GLU VAL MET ILE ARG SER GLU ASN ILE THR ASN ASN ALA SEQRES 23 A 516 LYS ASN ILE LEU VAL GLN PHE ASN THR PRO VAL GLN ILE SEQRES 24 A 516 ASN CYS THR ARG PRO ASN ASN ASN THR ARG LYS SER ILE SEQRES 25 A 516 ARG ILE GLY PRO GLY GLN ALA PHE TYR ALA THR GLY ASP SEQRES 26 A 516 ILE ILE GLY ASP ILE ARG GLN ALA HIS CYS ASN VAL SER SEQRES 27 A 516 LYS ALA THR TRP ASN GLU THR LEU GLY LYS VAL VAL LYS SEQRES 28 A 516 GLN LEU ARG LYS HIS PHE GLY ASN ASN THR ILE ILE ARG SEQRES 29 A 516 PHE ALA ASN SER SER GLY GLY ASP LEU GLU VAL THR THR SEQRES 30 A 516 HIS SER PHE ASN CYS GLY GLY GLU PHE PHE TYR CYS ASN SEQRES 31 A 516 THR SER GLY LEU PHE ASN SER THR TRP ILE SER ASN THR SEQRES 32 A 516 SER VAL GLN GLY SER ASN SER THR GLY SER ASN ASP SER SEQRES 33 A 516 ILE THR LEU PRO CYS ARG ILE LYS GLN ILE ILE ASN MET SEQRES 34 A 516 TRP GLN ARG ILE GLY GLN ALA MET TYR ALA PRO PRO ILE SEQRES 35 A 516 GLN GLY VAL ILE ARG CYS VAL SER ASN ILE THR GLY LEU SEQRES 36 A 516 ILE LEU THR ARG ASP GLY GLY SER THR ASN SER THR THR SEQRES 37 A 516 GLU THR PHE ARG PRO GLY GLY GLY ASP MET ARG ASP ASN SEQRES 38 A 516 TRP ARG SER GLU LEU TYR LYS TYR LYS VAL VAL LYS ILE SEQRES 39 A 516 GLU PRO LEU GLY VAL ALA PRO THR ARG CYS LYS ARG ARG SEQRES 40 A 516 VAL VAL GLY ARG ARG ARG ARG ARG ARG SEQRES 1 B 153 ALA VAL GLY ILE GLY ALA VAL PHE LEU GLY PHE LEU GLY SEQRES 2 B 153 ALA ALA GLY SER THR MET GLY ALA ALA SER MET THR LEU SEQRES 3 B 153 THR VAL GLN ALA ARG ASN LEU LEU SER GLY ILE VAL GLN SEQRES 4 B 153 GLN GLN SER ASN LEU LEU ARG ALA PRO GLU ALA GLN GLN SEQRES 5 B 153 HIS LEU LEU LYS LEU THR VAL TRP GLY ILE LYS GLN LEU SEQRES 6 B 153 GLN ALA ARG VAL LEU ALA VAL GLU ARG TYR LEU ARG ASP SEQRES 7 B 153 GLN GLN LEU LEU GLY ILE TRP GLY CYS SER GLY LYS LEU SEQRES 8 B 153 ILE CYS CYS THR ASN VAL PRO TRP ASN SER SER TRP SER SEQRES 9 B 153 ASN ARG ASN LEU SER GLU ILE TRP ASP ASN MET THR TRP SEQRES 10 B 153 LEU GLN TRP ASP LYS GLU ILE SER ASN TYR THR GLN ILE SEQRES 11 B 153 ILE TYR GLY LEU LEU GLU GLU SER GLN ASN GLN GLN GLU SEQRES 12 B 153 LYS ASN GLU GLN ASP LEU LEU ALA LEU ASP SEQRES 1 H 125 GLU VAL GLN LEU VAL GLU THR GLY GLY GLY LEU VAL GLN SEQRES 2 H 125 PRO GLY GLY SER LEU LYS LEU SER CYS ARG ALA SER GLY SEQRES 3 H 125 TYR THR PHE SER SER PHE ALA MET SER TRP VAL ARG GLN SEQRES 4 H 125 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER LEU ILE ASN SEQRES 5 H 125 ASP ARG GLY GLY LEU THR PHE TYR VAL ASP SER VAL LYS SEQRES 6 H 125 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 H 125 LEU SER LEU GLN MET HIS SER LEU ARG ASP GLY ASP THR SEQRES 8 H 125 ALA VAL TYR TYR CYS ALA THR GLY GLY MET SER SER ALA SEQRES 9 H 125 LEU GLN SER SER LYS TYR TYR PHE ASP PHE TRP GLY GLN SEQRES 10 H 125 GLY ALA LEU VAL THR VAL SER SER SEQRES 1 L 128 ALA LEU THR GLN PRO PRO SER VAL SER GLY SER PRO GLY SEQRES 2 L 128 GLN SER VAL THR ILE SER CYS THR GLY THR SER SER ASP SEQRES 3 L 128 ILE GLY SER TYR ASN TYR VAL SER TRP TYR GLN GLN HIS SEQRES 4 L 128 PRO GLY LYS ALA PRO LYS LEU MET ILE TYR ASP VAL THR SEQRES 5 L 128 GLN ARG PRO SER GLY VAL SER ASP ARG PHE SER GLY SER SEQRES 6 L 128 LYS SER GLY ASN THR ALA SER LEU THR ILE SER GLY LEU SEQRES 7 L 128 GLN ALA ASP ASP GLU ALA ASP TYR TYR CYS SER ALA TYR SEQRES 8 L 128 ALA GLY ARG GLN THR PHE TYR ILE PHE GLY GLY GLY THR SEQRES 9 L 128 ARG LEU THR VAL LEU GLY GLN PRO LYS ALA SER PRO THR SEQRES 10 L 128 VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET NAG F 1 14 HET NAG F 2 14 HET NAG G 1 14 HET NAG G 2 14 HET NAG A 601 14 HET NAG A 602 14 HET NAG A 603 14 HET NAG A 606 14 HET NAG A 609 14 HET NAG A 614 14 HET NAG A 615 14 HET NAG A 616 14 HET NAG A 617 14 HET NAG A 618 14 HET NAG A 619 14 HET NAG A 620 14 HET NAG A 623 14 HET NAG B 701 14 HET NAG B 702 14 HET NAG B 703 14 HET NAG B 704 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 5 NAG 27(C8 H15 N O6) FORMUL 7 BMA C6 H12 O6 FORMUL 7 MAN C6 H12 O6 HELIX 1 AA1 ASN A 98 SER A 115 1 18 HELIX 2 AA2 LEU A 122 CYS A 126 5 5 HELIX 3 AA3 THR A 139 ARG A 151 5 5 HELIX 4 AA4 ASN A 195 THR A 198 5 4 HELIX 5 AA5 SER A 334 GLY A 354 1 21 HELIX 6 AA6 ASP A 368 THR A 373 1 6 HELIX 7 AA7 ARG A 476 TYR A 484 1 9 HELIX 8 AA8 LEU B 523 SER B 528 5 6 HELIX 9 AA9 THR B 536 ARG B 542 1 7 HELIX 10 AB1 THR B 569 TRP B 596 1 28 HELIX 11 AB2 ASN B 618 ASN B 625 1 8 HELIX 12 AB3 THR B 627 ILE B 635 1 9 HELIX 13 AB4 TYR B 638 LEU B 660 1 23 HELIX 14 AB5 THR H 28 PHE H 32 5 5 HELIX 15 AB6 ASP H 61 LYS H 64 5 4 HELIX 16 AB7 ARG H 83 THR H 87 5 5 HELIX 17 AB8 GLN L 79 GLU L 83 5 5 SHEET 1 AA1 3 LEU A 494 PRO A 498 0 SHEET 2 AA1 3 VAL A 36 TYR A 40 -1 N TYR A 39 O GLY A 495 SHEET 3 AA1 3 ILE B 603 CYS B 605 -1 O CYS B 604 N VAL A 38 SHEET 1 AA2 5 TRP A 45 ASP A 47 0 SHEET 2 AA2 5 TYR A 486 ILE A 491 -1 O LYS A 490 N LYS A 46 SHEET 3 AA2 5 PHE A 223 CYS A 228 -1 N LEU A 226 O LYS A 487 SHEET 4 AA2 5 VAL A 242 VAL A 245 -1 O SER A 243 N LYS A 227 SHEET 5 AA2 5 GLU A 83 LEU A 86 -1 N ILE A 84 O THR A 244 SHEET 1 AA3 3 VAL A 75 PRO A 76 0 SHEET 2 AA3 3 PHE A 53 SER A 56 1 N SER A 56 O VAL A 75 SHEET 3 AA3 3 HIS A 216 CYS A 218 -1 O CYS A 218 N PHE A 53 SHEET 1 AA4 2 GLU A 91 ASN A 94 0 SHEET 2 AA4 2 THR A 236 CYS A 239 -1 O GLY A 237 N PHE A 93 SHEET 1 AA5 5 LYS A 169 TYR A 177 0 SHEET 2 AA5 5 LEU A 154 THR A 162 -1 N MET A 161 O GLN A 170 SHEET 3 AA5 5 LEU A 129 ASN A 133 -1 N GLN A 130 O SER A 158 SHEET 4 AA5 5 GLU A 190 LEU A 193 -1 O TYR A 191 N LEU A 129 SHEET 5 AA5 5 VAL A 181 GLN A 183 -1 N VAL A 182 O ARG A 192 SHEET 1 AA6 3 ILE A 201 GLN A 203 0 SHEET 2 AA6 3 ALA A 433 TYR A 435 1 O TYR A 435 N THR A 202 SHEET 3 AA6 3 ILE A 423 ASN A 425 -1 N ILE A 424 O MET A 434 SHEET 1 AA7 7 LEU A 259 LEU A 261 0 SHEET 2 AA7 7 GLY A 441 ASP A 457 -1 O GLY A 451 N LEU A 260 SHEET 3 AA7 7 ILE A 284 ASN A 302 -1 N CYS A 296 O CYS A 445 SHEET 4 AA7 7 ALA A 329 VAL A 333 -1 O ASN A 332 N ASN A 295 SHEET 5 AA7 7 ILE A 414 LYS A 421 -1 O LEU A 416 N CYS A 331 SHEET 6 AA7 7 GLU A 381 CYS A 385 -1 N TYR A 384 O ARG A 419 SHEET 7 AA7 7 HIS A 374 CYS A 378 -1 N HIS A 374 O CYS A 385 SHEET 1 AA8 6 MET A 271 SER A 274 0 SHEET 2 AA8 6 ILE A 284 ASN A 302 -1 O LEU A 285 N ARG A 273 SHEET 3 AA8 6 GLY A 441 ASP A 457 -1 O CYS A 445 N CYS A 296 SHEET 4 AA8 6 THR A 465 PRO A 470 -1 O THR A 467 N ASP A 457 SHEET 5 AA8 6 ILE A 358 PHE A 361 1 N ARG A 360 O PHE A 468 SHEET 6 AA8 6 SER A 393 THR A 394 -1 O SER A 393 N PHE A 361 SHEET 1 AA9 2 ARG A 304 GLY A 312 0 SHEET 2 AA9 2 GLN A 315 THR A 320 -1 O PHE A 317 N ILE A 307 SHEET 1 AB1 4 GLN H 3 GLY H 8 0 SHEET 2 AB1 4 SER H 17 SER H 25 -1 O ARG H 23 N VAL H 5 SHEET 3 AB1 4 THR H 77 HIS H 82A-1 O MET H 82 N LEU H 18 SHEET 4 AB1 4 THR H 68 ASP H 72 -1 N THR H 68 O GLN H 81 SHEET 1 AB2 6 LEU H 11 VAL H 12 0 SHEET 2 AB2 6 ALA H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AB2 6 ALA H 88 GLY H 95 -1 N TYR H 90 O ALA H 107 SHEET 4 AB2 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 AB2 6 LEU H 45 ILE H 51 -1 O ILE H 51 N MET H 34 SHEET 6 AB2 6 THR H 57 TYR H 59 -1 O PHE H 58 N LEU H 50 SHEET 1 AB3 4 LEU H 11 VAL H 12 0 SHEET 2 AB3 4 ALA H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AB3 4 ALA H 88 GLY H 95 -1 N TYR H 90 O ALA H 107 SHEET 4 AB3 4 PHE H 100H TRP H 103 -1 O PHE H 102 N THR H 94 SHEET 1 AB4 5 VAL L 11 GLY L 13 0 SHEET 2 AB4 5 THR L 102 VAL L 106 1 O THR L 105 N VAL L 11 SHEET 3 AB4 5 ASP L 85 TYR L 91 -1 N TYR L 86 O THR L 102 SHEET 4 AB4 5 TRP L 35 GLN L 38 -1 N GLN L 38 O ASP L 85 SHEET 5 AB4 5 LYS L 45 ILE L 48 -1 O MET L 47 N TRP L 35 SHEET 1 AB5 4 VAL L 11 GLY L 13 0 SHEET 2 AB5 4 THR L 102 VAL L 106 1 O THR L 105 N VAL L 11 SHEET 3 AB5 4 ASP L 85 TYR L 91 -1 N TYR L 86 O THR L 102 SHEET 4 AB5 4 TYR L 96 PHE L 98 -1 O ILE L 97 N ALA L 90 SHEET 1 AB6 3 VAL L 19 THR L 24 0 SHEET 2 AB6 3 THR L 70 ILE L 75 -1 O ALA L 71 N CYS L 23 SHEET 3 AB6 3 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SSBOND 1 CYS A 119 CYS A 205 1555 1555 2.06 SSBOND 2 CYS A 126 CYS A 196 1555 1555 2.03 SSBOND 3 CYS A 131 CYS A 157 1555 1555 2.02 SSBOND 4 CYS A 218 CYS A 247 1555 1555 2.04 SSBOND 5 CYS A 228 CYS A 239 1555 1555 2.14 SSBOND 6 CYS A 296 CYS A 331 1555 1555 2.03 SSBOND 7 CYS A 378 CYS A 445 1555 1555 2.02 SSBOND 8 CYS A 385 CYS A 418 1555 1555 2.02 SSBOND 9 CYS A 501 CYS B 605 1555 1555 2.11 SSBOND 10 CYS B 598 CYS B 604 1555 1555 2.02 SSBOND 11 CYS H 22 CYS H 92 1555 1555 2.04 SSBOND 12 CYS L 23 CYS L 88 1555 1555 2.03 LINK ND2 ASN A 88 C1 NAG A 601 1555 1555 1.40 LINK ND2 ASN A 133 C1 NAG A 602 1555 1555 1.42 LINK ND2 ASN A 137 C1 NAG A 603 1555 1555 1.41 LINK ND2 ASN A 156 C1 NAG C 1 1555 1555 1.40 LINK ND2 ASN A 160 C1 NAG A 606 1555 1555 1.41 LINK ND2 ASN A 197 C1 NAG D 1 1555 1555 1.41 LINK ND2 ASN A 234 C1 NAG A 609 1555 1555 1.40 LINK ND2 ASN A 262 C1 NAG E 1 1555 1555 1.40 LINK ND2 ASN A 276 C1 NAG A 614 1555 1555 1.41 LINK ND2 ASN A 295 C1 NAG A 615 1555 1555 1.41 LINK ND2 ASN A 301 C1 NAG A 616 1555 1555 1.41 LINK ND2 ASN A 332 C1 NAG A 617 1555 1555 1.41 LINK ND2 ASN A 339 C1 NAG A 618 1555 1555 1.41 LINK ND2 ASN A 355 C1 NAG A 619 1555 1555 1.41 LINK ND2 ASN A 363 C1 NAG A 620 1555 1555 1.41 LINK ND2 ASN A 386 C1 NAG F 1 1555 1555 1.40 LINK ND2 ASN A 392 C1 NAG A 623 1555 1555 1.41 LINK ND2 ASN A 448 C1 NAG G 1 1555 1555 1.40 LINK ND2 ASN B 611 C1 NAG B 701 1555 1555 1.41 LINK ND2 ASN B 618 C1 NAG B 702 1555 1555 1.41 LINK ND2 ASN B 625 C1 NAG B 703 1555 1555 1.42 LINK ND2 ASN B 637 C1 NAG B 704 1555 1555 1.41 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.41 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.41 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.42 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.47 LINK O3 BMA E 3 C1 MAN E 4 1555 1555 1.47 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.41 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.42 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000