HEADER SIGNALING PROTEIN 04-JUN-20 6XAR TITLE STRUCTURE OF CBL TYROSINE KINASE BINDING DOMAIN (TKBD) WITH C-TERMINAL TITLE 2 TAIL OF SRC-LIKE KINASE PROTEIN 2 (SLAP2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE CBL; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CASITAS B-LINEAGE LYMPHOMA PROTO-ONCOGENE,PROTO-ONCOGENE C- COMPND 5 CBL,RING FINGER PROTEIN 55,RING-TYPE E3 UBIQUITIN TRANSFERASE CBL, COMPND 6 SIGNAL TRANSDUCTION PROTEIN CBL; COMPND 7 EC: 2.3.2.27; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: SRC-LIKE-ADAPTER 2; COMPND 11 CHAIN: C, D; COMPND 12 SYNONYM: SRC-LIKE ADAPTER PROTEIN 2,SLAP-2; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CBL, CBL2, RNF55; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PGEX4T-1; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: GST-CBL; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 12 ORGANISM_COMMON: MOUSE; SOURCE 13 ORGANISM_TAXID: 10090; SOURCE 14 GENE: SLA2; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PET32A-MOD; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: TRX-HIS(6)-MSLAP2 KEYWDS ADAPTOR, E3 UBIQUITIN LIGASE, ACTIVATION, COMPLEX, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.E.WYBENGA-GROOT,C.J.MCGLADE REVDAT 3 18-OCT-23 6XAR 1 REMARK REVDAT 2 06-OCT-21 6XAR 1 JRNL REVDAT 1 03-MAR-21 6XAR 0 JRNL AUTH L.E.WYBENGA-GROOT,A.J.TENCH,C.D.SIMPSON,J.S.GERMAIN, JRNL AUTH 2 B.RAUGHT,M.F.MORAN,C.J.MCGLADE JRNL TITL SLAP2 ADAPTOR BINDING DISRUPTS C-CBL AUTOINHIBITION TO JRNL TITL 2 ACTIVATE UBIQUITIN LIGASE FUNCTION. JRNL REF J.MOL.BIOL. V. 433 66880 2021 JRNL REFN ESSN 1089-8638 JRNL PMID 33617900 JRNL DOI 10.1016/J.JMB.2021.166880 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH L.E.WYBENGA-GROOT,C.J.MCGLADE REMARK 1 TITL SLEUTHING BIOCHEMICAL EVIDENCE TO ELUCIDATE UNASSIGNED REMARK 1 TITL 2 ELECTRON DENSITY IN A CBL-SLAP2 CRYSTAL COMPLEX REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 77 37 2021 REMARK 1 REFN ESSN 2053-230X REMARK 1 DOI 10.1107/S2053230X21000911 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.32 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 83.8 REMARK 3 NUMBER OF REFLECTIONS : 18869 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.252 REMARK 3 R VALUE (WORKING SET) : 0.249 REMARK 3 FREE R VALUE : 0.293 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 943 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.3230 - 4.7819 0.98 3065 166 0.2130 0.2450 REMARK 3 2 4.7819 - 3.7961 1.00 3042 181 0.2115 0.2578 REMARK 3 3 3.7961 - 3.3164 1.00 3079 130 0.2536 0.2822 REMARK 3 4 3.3164 - 3.0133 1.00 3060 157 0.2905 0.3422 REMARK 3 5 3.0133 - 2.7973 0.96 2906 164 0.3374 0.4507 REMARK 3 6 2.7973 - 2.6324 0.66 2003 96 0.3224 0.3342 REMARK 3 7 2.6324 - 2.5010 0.26 771 49 0.3104 0.3507 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.17 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5085 REMARK 3 ANGLE : 0.602 6918 REMARK 3 CHIRALITY : 0.027 774 REMARK 3 PLANARITY : 0.003 880 REMARK 3 DIHEDRAL : 10.973 1778 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6XAR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1000249838. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97921 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.3.11 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20374 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 45.323 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.5 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 57.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.60100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.7 REMARK 200 STARTING MODEL: 1B47 REMARK 200 REMARK 200 REMARK: ROD-LIKE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CBL/SLAP2 COMPLEX MIXED IN HANGING REMARK 280 DROP WITH EQUAL VOLUME (200 NL) OF 0.1 M HEPES PH 7.5, 10% (W/V) REMARK 280 PEG8000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 43.48000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 23 REMARK 465 SER A 24 REMARK 465 LEU A 25 REMARK 465 ILE A 26 REMARK 465 GLY A 27 REMARK 465 LEU A 28 REMARK 465 MET A 29 REMARK 465 LYS A 30 REMARK 465 ASP A 31 REMARK 465 ALA A 32 REMARK 465 PHE A 33 REMARK 465 GLN A 34 REMARK 465 PRO A 35 REMARK 465 HIS A 36 REMARK 465 HIS A 37 REMARK 465 HIS A 38 REMARK 465 HIS A 39 REMARK 465 HIS A 40 REMARK 465 HIS A 41 REMARK 465 HIS A 42 REMARK 465 LEU A 43 REMARK 465 SER A 44 REMARK 465 PRO A 45 REMARK 465 HIS A 46 REMARK 465 PRO A 47 REMARK 465 CYS A 353 REMARK 465 GLU A 354 REMARK 465 PRO A 355 REMARK 465 THR A 356 REMARK 465 PRO A 357 REMARK 465 GLY B 23 REMARK 465 SER B 24 REMARK 465 LEU B 25 REMARK 465 ILE B 26 REMARK 465 GLY B 27 REMARK 465 LEU B 28 REMARK 465 MET B 29 REMARK 465 LYS B 30 REMARK 465 ASP B 31 REMARK 465 ALA B 32 REMARK 465 PHE B 33 REMARK 465 GLN B 34 REMARK 465 PRO B 35 REMARK 465 HIS B 36 REMARK 465 HIS B 37 REMARK 465 HIS B 38 REMARK 465 HIS B 39 REMARK 465 HIS B 40 REMARK 465 HIS B 41 REMARK 465 HIS B 42 REMARK 465 LEU B 43 REMARK 465 SER B 44 REMARK 465 PRO B 45 REMARK 465 HIS B 46 REMARK 465 PRO B 47 REMARK 465 PRO B 48 REMARK 465 GLY B 49 REMARK 465 THR B 50 REMARK 465 VAL B 51 REMARK 465 LEU B 352 REMARK 465 CYS B 353 REMARK 465 GLU B 354 REMARK 465 PRO B 355 REMARK 465 THR B 356 REMARK 465 PRO B 357 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 53 CG CD CE NZ REMARK 470 LYS A 74 CG CD CE NZ REMARK 470 LEU A 77 CG CD1 CD2 REMARK 470 LYS A 78 CG CD CE NZ REMARK 470 ASN A 79 CG OD1 ND2 REMARK 470 SER A 80 OG REMARK 470 GLU A 103 CG CD OE1 OE2 REMARK 470 LYS A 105 CG CD CE NZ REMARK 470 GLU A 107 CG CD OE1 OE2 REMARK 470 GLU A 111 CG CD OE1 OE2 REMARK 470 LYS A 134 CG CD CE NZ REMARK 470 GLU A 138 CG CD OE1 OE2 REMARK 470 ARG A 139 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 142 CG CD OE1 OE2 REMARK 470 GLU A 143 CG CD OE1 OE2 REMARK 470 GLN A 146 CG CD OE1 NE2 REMARK 470 ARG A 148 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 149 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 153 CG CD CE NZ REMARK 470 ARG A 191 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 283 CG CD CE NZ REMARK 470 ARG A 299 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 320 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 53 CG CD CE NZ REMARK 470 LYS B 54 CG CD CE NZ REMARK 470 MET B 55 CG SD CE REMARK 470 GLU B 57 CG CD OE1 OE2 REMARK 470 LYS B 58 CG CD CE NZ REMARK 470 LYS B 61 CG CD CE NZ REMARK 470 ARG B 68 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 71 CG CD OE1 NE2 REMARK 470 LYS B 74 CG CD CE NZ REMARK 470 LYS B 78 CG CD CE NZ REMARK 470 GLN B 93 CG CD OE1 NE2 REMARK 470 ARG B 96 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 99 CG CD1 CD2 REMARK 470 ARG B 101 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 103 CG CD OE1 OE2 REMARK 470 LYS B 105 CG CD CE NZ REMARK 470 GLU B 107 CG CD OE1 OE2 REMARK 470 GLU B 113 CG CD OE1 OE2 REMARK 470 ARG B 116 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 120 CG CD OE1 OE2 REMARK 470 MET B 123 CG SD CE REMARK 470 LYS B 127 CG CD CE NZ REMARK 470 LYS B 134 CG CD CE NZ REMARK 470 LYS B 137 CG CD CE NZ REMARK 470 GLU B 138 CG CD OE1 OE2 REMARK 470 ARG B 139 CG CD NE CZ NH1 NH2 REMARK 470 MET B 140 CG SD CE REMARK 470 GLU B 142 CG CD OE1 OE2 REMARK 470 GLU B 143 CG CD OE1 OE2 REMARK 470 ARG B 148 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 149 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 173 CG CD1 CD2 REMARK 470 GLN B 175 CG CD OE1 NE2 REMARK 470 ARG B 180 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 185 CG OD1 OD2 REMARK 470 GLU B 188 CG CD OE1 OE2 REMARK 470 ARG B 191 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 192 CG CD CE NZ REMARK 470 GLU B 196 CG CD OE1 OE2 REMARK 470 LYS B 203 CG CD CE NZ REMARK 470 GLU B 211 CG CD OE1 OE2 REMARK 470 VAL B 212 CG1 CG2 REMARK 470 HIS B 286 CG ND1 CD2 CE1 NE2 REMARK 470 GLU C 253 CG CD OE1 OE2 REMARK 470 LEU D 237 CG CD1 CD2 REMARK 470 GLU D 243 CG CD OE1 OE2 REMARK 470 GLU D 253 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG1 THR A 178 OH TYR B 274 1556 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 76 85.53 55.44 REMARK 500 LYS A 105 58.99 -95.76 REMARK 500 LYS A 137 -86.42 -61.14 REMARK 500 TYR A 141 46.57 -105.13 REMARK 500 ALA A 270 -138.56 53.55 REMARK 500 THR A 309 -168.74 -103.67 REMARK 500 THR A 350 29.53 -69.94 REMARK 500 LYS B 105 39.72 -164.61 REMARK 500 LYS B 137 -135.55 57.48 REMARK 500 PHE B 169 74.34 -118.70 REMARK 500 GLN B 175 41.62 -155.02 REMARK 500 GLU B 196 89.82 57.19 REMARK 500 LYS B 197 -160.54 -124.34 REMARK 500 THR B 198 -38.93 -130.11 REMARK 500 SER B 216 -70.85 -62.97 REMARK 500 ALA B 262 -91.83 -100.73 REMARK 500 VAL B 263 -54.61 -28.43 REMARK 500 PRO B 266 3.72 -69.32 REMARK 500 ALA B 270 -140.04 53.39 REMARK 500 LYS B 283 -37.19 65.98 REMARK 500 LYS B 287 82.70 -159.86 REMARK 500 PRO B 319 92.50 -66.52 REMARK 500 ASN B 321 -18.34 67.25 REMARK 500 GLU C 239 -70.72 -156.37 REMARK 500 ASP C 254 162.80 68.29 REMARK 500 GLU D 239 -124.90 -161.96 REMARK 500 ASP D 254 152.76 67.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 229 OD1 REMARK 620 2 THR A 231 OG1 98.2 REMARK 620 3 ASN A 233 OD1 77.9 65.4 REMARK 620 4 TYR A 235 O 72.5 150.3 84.9 REMARK 620 5 GLU A 240 OE1 121.1 119.8 156.6 88.1 REMARK 620 6 GLU A 240 OE2 93.6 84.8 147.0 123.2 52.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 229 OD1 REMARK 620 2 THR B 231 OG1 88.3 REMARK 620 3 ASN B 233 OD1 73.0 67.8 REMARK 620 4 TYR B 235 O 75.4 153.9 87.7 REMARK 620 5 GLU B 240 OE1 109.9 125.1 166.1 80.1 REMARK 620 6 GLU B 240 OE2 87.5 80.3 142.7 118.4 50.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 401 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE MOUSE SLAP2 CONSTRUCT WAS DEGRADED DURING CRYSTALLIZATION. THE REMARK 999 ORIGINALLY EXPRESSED SEQUENCE, AFTER TAG CLEAVAGE, WAS REMARK 999 GSQPERHKVTAVALGSFPAGEQARLSLRLGEPLTIISEDGDWWTVQSEVSGREYHMPSVY VAKVAHG REMARK 999 WLYEGLSREKAEELLLLPGNPGGAFLIRESQTRRGCYSLSVRLSRPASWDRIR HYRIQRLDNGWLYI REMARK 999 SPRLTFPSLHALVEHYSELADGICCPLREPCVLQKLGPLPGKDTPP PVTVPTSSLNWKKLDRSLLFL REMARK 999 EAPASGEASLLSEGLRESLSSYISLAEDPLDDA CORRESPONDING TO RESIDUES 28-259 REMARK 999 OF SLAP2. ONLY RESIDUES 237-255 WERE OBSERVED IN THE ELECTRON REMARK 999 DENSITY WITH THE REMAINDER PRESUMABLY DEGRADED. DBREF 6XAR A 25 357 UNP P22681 CBL_HUMAN 25 357 DBREF 6XAR B 25 357 UNP P22681 CBL_HUMAN 25 357 DBREF1 6XAR C 237 255 UNP SLAP2-2_MOUSE DBREF2 6XAR C Q8R4L0-2 211 229 DBREF1 6XAR D 237 255 UNP SLAP2-2_MOUSE DBREF2 6XAR D Q8R4L0-2 211 229 SEQADV 6XAR GLY A 23 UNP P22681 EXPRESSION TAG SEQADV 6XAR SER A 24 UNP P22681 EXPRESSION TAG SEQADV 6XAR GLY B 23 UNP P22681 EXPRESSION TAG SEQADV 6XAR SER B 24 UNP P22681 EXPRESSION TAG SEQRES 1 A 335 GLY SER LEU ILE GLY LEU MET LYS ASP ALA PHE GLN PRO SEQRES 2 A 335 HIS HIS HIS HIS HIS HIS HIS LEU SER PRO HIS PRO PRO SEQRES 3 A 335 GLY THR VAL ASP LYS LYS MET VAL GLU LYS CYS TRP LYS SEQRES 4 A 335 LEU MET ASP LYS VAL VAL ARG LEU CYS GLN ASN PRO LYS SEQRES 5 A 335 LEU ALA LEU LYS ASN SER PRO PRO TYR ILE LEU ASP LEU SEQRES 6 A 335 LEU PRO ASP THR TYR GLN HIS LEU ARG THR ILE LEU SER SEQRES 7 A 335 ARG TYR GLU GLY LYS MET GLU THR LEU GLY GLU ASN GLU SEQRES 8 A 335 TYR PHE ARG VAL PHE MET GLU ASN LEU MET LYS LYS THR SEQRES 9 A 335 LYS GLN THR ILE SER LEU PHE LYS GLU GLY LYS GLU ARG SEQRES 10 A 335 MET TYR GLU GLU ASN SER GLN PRO ARG ARG ASN LEU THR SEQRES 11 A 335 LYS LEU SER LEU ILE PHE SER HIS MET LEU ALA GLU LEU SEQRES 12 A 335 LYS GLY ILE PHE PRO SER GLY LEU PHE GLN GLY ASP THR SEQRES 13 A 335 PHE ARG ILE THR LYS ALA ASP ALA ALA GLU PHE TRP ARG SEQRES 14 A 335 LYS ALA PHE GLY GLU LYS THR ILE VAL PRO TRP LYS SER SEQRES 15 A 335 PHE ARG GLN ALA LEU HIS GLU VAL HIS PRO ILE SER SER SEQRES 16 A 335 GLY LEU GLU ALA MET ALA LEU LYS SER THR ILE ASP LEU SEQRES 17 A 335 THR CYS ASN ASP TYR ILE SER VAL PHE GLU PHE ASP ILE SEQRES 18 A 335 PHE THR ARG LEU PHE GLN PRO TRP SER SER LEU LEU ARG SEQRES 19 A 335 ASN TRP ASN SER LEU ALA VAL THR HIS PRO GLY TYR MET SEQRES 20 A 335 ALA PHE LEU THR TYR ASP GLU VAL LYS ALA ARG LEU GLN SEQRES 21 A 335 LYS PHE ILE HIS LYS PRO GLY SER TYR ILE PHE ARG LEU SEQRES 22 A 335 SER CYS THR ARG LEU GLY GLN TRP ALA ILE GLY TYR VAL SEQRES 23 A 335 THR ALA ASP GLY ASN ILE LEU GLN THR ILE PRO HIS ASN SEQRES 24 A 335 LYS PRO LEU PHE GLN ALA LEU ILE ASP GLY PHE ARG GLU SEQRES 25 A 335 GLY PHE TYR LEU PHE PRO ASP GLY ARG ASN GLN ASN PRO SEQRES 26 A 335 ASP LEU THR GLY LEU CYS GLU PRO THR PRO SEQRES 1 B 335 GLY SER LEU ILE GLY LEU MET LYS ASP ALA PHE GLN PRO SEQRES 2 B 335 HIS HIS HIS HIS HIS HIS HIS LEU SER PRO HIS PRO PRO SEQRES 3 B 335 GLY THR VAL ASP LYS LYS MET VAL GLU LYS CYS TRP LYS SEQRES 4 B 335 LEU MET ASP LYS VAL VAL ARG LEU CYS GLN ASN PRO LYS SEQRES 5 B 335 LEU ALA LEU LYS ASN SER PRO PRO TYR ILE LEU ASP LEU SEQRES 6 B 335 LEU PRO ASP THR TYR GLN HIS LEU ARG THR ILE LEU SER SEQRES 7 B 335 ARG TYR GLU GLY LYS MET GLU THR LEU GLY GLU ASN GLU SEQRES 8 B 335 TYR PHE ARG VAL PHE MET GLU ASN LEU MET LYS LYS THR SEQRES 9 B 335 LYS GLN THR ILE SER LEU PHE LYS GLU GLY LYS GLU ARG SEQRES 10 B 335 MET TYR GLU GLU ASN SER GLN PRO ARG ARG ASN LEU THR SEQRES 11 B 335 LYS LEU SER LEU ILE PHE SER HIS MET LEU ALA GLU LEU SEQRES 12 B 335 LYS GLY ILE PHE PRO SER GLY LEU PHE GLN GLY ASP THR SEQRES 13 B 335 PHE ARG ILE THR LYS ALA ASP ALA ALA GLU PHE TRP ARG SEQRES 14 B 335 LYS ALA PHE GLY GLU LYS THR ILE VAL PRO TRP LYS SER SEQRES 15 B 335 PHE ARG GLN ALA LEU HIS GLU VAL HIS PRO ILE SER SER SEQRES 16 B 335 GLY LEU GLU ALA MET ALA LEU LYS SER THR ILE ASP LEU SEQRES 17 B 335 THR CYS ASN ASP TYR ILE SER VAL PHE GLU PHE ASP ILE SEQRES 18 B 335 PHE THR ARG LEU PHE GLN PRO TRP SER SER LEU LEU ARG SEQRES 19 B 335 ASN TRP ASN SER LEU ALA VAL THR HIS PRO GLY TYR MET SEQRES 20 B 335 ALA PHE LEU THR TYR ASP GLU VAL LYS ALA ARG LEU GLN SEQRES 21 B 335 LYS PHE ILE HIS LYS PRO GLY SER TYR ILE PHE ARG LEU SEQRES 22 B 335 SER CYS THR ARG LEU GLY GLN TRP ALA ILE GLY TYR VAL SEQRES 23 B 335 THR ALA ASP GLY ASN ILE LEU GLN THR ILE PRO HIS ASN SEQRES 24 B 335 LYS PRO LEU PHE GLN ALA LEU ILE ASP GLY PHE ARG GLU SEQRES 25 B 335 GLY PHE TYR LEU PHE PRO ASP GLY ARG ASN GLN ASN PRO SEQRES 26 B 335 ASP LEU THR GLY LEU CYS GLU PRO THR PRO SEQRES 1 C 19 LEU SER GLU GLY LEU ARG GLU SER LEU SER SER TYR ILE SEQRES 2 C 19 SER LEU ALA GLU ASP PRO SEQRES 1 D 19 LEU SER GLU GLY LEU ARG GLU SER LEU SER SER TYR ILE SEQRES 2 D 19 SER LEU ALA GLU ASP PRO HET CA A 401 1 HET CA B 401 1 HETNAM CA CALCIUM ION FORMUL 5 CA 2(CA 2+) FORMUL 7 HOH *47(H2 O) HELIX 1 AA1 ASP A 52 GLN A 71 1 20 HELIX 2 AA2 ASN A 72 ALA A 76 5 5 HELIX 3 AA3 TYR A 83 TYR A 102 1 20 HELIX 4 AA4 LYS A 105 GLY A 110 1 6 HELIX 5 AA5 ASN A 112 GLY A 136 1 25 HELIX 6 AA6 LYS A 137 GLU A 142 5 6 HELIX 7 AA7 SER A 145 PHE A 169 1 25 HELIX 8 AA8 PRO A 170 LEU A 173 5 4 HELIX 9 AA9 LYS A 183 PHE A 194 1 12 HELIX 10 AB1 TRP A 202 HIS A 213 1 12 HELIX 11 AB2 SER A 217 ASP A 229 1 13 HELIX 12 AB3 VAL A 238 PHE A 248 1 11 HELIX 13 AB4 PRO A 250 SER A 252 5 3 HELIX 14 AB5 SER A 253 ALA A 262 1 10 HELIX 15 AB6 THR A 273 GLN A 282 1 10 HELIX 16 AB7 LYS A 283 ILE A 285 5 3 HELIX 17 AB8 PRO A 323 GLU A 334 1 12 HELIX 18 AB9 LYS B 53 CYS B 70 1 18 HELIX 19 AC1 TYR B 83 TYR B 102 1 20 HELIX 20 AC2 LYS B 105 GLU B 111 1 7 HELIX 21 AC3 ASN B 112 LYS B 137 1 26 HELIX 22 AC4 GLU B 138 GLU B 142 5 5 HELIX 23 AC5 SER B 145 PHE B 169 1 25 HELIX 24 AC6 PRO B 170 LEU B 173 5 4 HELIX 25 AC7 LYS B 183 PHE B 194 1 12 HELIX 26 AC8 TRP B 202 HIS B 213 1 12 HELIX 27 AC9 SER B 217 ASP B 229 1 13 HELIX 28 AD1 VAL B 238 PHE B 248 1 11 HELIX 29 AD2 PRO B 250 SER B 252 5 3 HELIX 30 AD3 SER B 253 ALA B 262 1 10 HELIX 31 AD4 THR B 273 LEU B 281 1 9 HELIX 32 AD5 LYS B 283 LYS B 287 5 5 HELIX 33 AD6 PRO B 323 GLU B 334 1 12 HELIX 34 AD7 GLY C 240 ALA C 252 1 13 HELIX 35 AD8 GLY D 240 LEU D 251 1 12 SHEET 1 AA1 2 ILE A 199 PRO A 201 0 SHEET 2 AA1 2 TYR A 235 SER A 237 -1 O ILE A 236 N VAL A 200 SHEET 1 AA2 4 TYR A 268 PHE A 271 0 SHEET 2 AA2 4 SER A 290 SER A 296 1 O LEU A 295 N ALA A 270 SHEET 3 AA2 4 ARG A 299 VAL A 308 -1 O GLY A 306 N ILE A 292 SHEET 4 AA2 4 ILE A 314 THR A 317 -1 O LEU A 315 N TYR A 307 SHEET 1 AA3 3 TYR A 268 PHE A 271 0 SHEET 2 AA3 3 SER A 290 SER A 296 1 O LEU A 295 N ALA A 270 SHEET 3 AA3 3 PHE A 339 PRO A 340 1 O PHE A 339 N TYR A 291 SHEET 1 AA4 2 ILE B 199 PRO B 201 0 SHEET 2 AA4 2 TYR B 235 SER B 237 -1 O ILE B 236 N VAL B 200 SHEET 1 AA5 4 TYR B 268 PHE B 271 0 SHEET 2 AA5 4 SER B 290 LEU B 295 1 O LEU B 295 N ALA B 270 SHEET 3 AA5 4 TRP B 303 VAL B 308 -1 O VAL B 308 N SER B 290 SHEET 4 AA5 4 ILE B 314 LEU B 315 -1 O LEU B 315 N TYR B 307 SHEET 1 AA6 3 TYR B 268 PHE B 271 0 SHEET 2 AA6 3 SER B 290 LEU B 295 1 O LEU B 295 N ALA B 270 SHEET 3 AA6 3 PHE B 339 PRO B 340 1 O PHE B 339 N TYR B 291 LINK OD1 ASP A 229 CA CA A 401 1555 1555 2.49 LINK OG1 THR A 231 CA CA A 401 1555 1555 2.41 LINK OD1 ASN A 233 CA CA A 401 1555 1555 2.54 LINK O TYR A 235 CA CA A 401 1555 1555 2.42 LINK OE1 GLU A 240 CA CA A 401 1555 1555 2.50 LINK OE2 GLU A 240 CA CA A 401 1555 1555 2.50 LINK OD1 ASP B 229 CA CA B 401 1555 1555 2.72 LINK OG1 THR B 231 CA CA B 401 1555 1555 2.48 LINK OD1 ASN B 233 CA CA B 401 1555 1555 2.45 LINK O TYR B 235 CA CA B 401 1555 1555 2.47 LINK OE1 GLU B 240 CA CA B 401 1555 1555 2.53 LINK OE2 GLU B 240 CA CA B 401 1555 1555 2.59 CISPEP 1 PRO A 81 PRO A 82 0 0.23 CISPEP 2 GLN A 249 PRO A 250 0 -0.41 CISPEP 3 ASP A 311 GLY A 312 0 1.72 CISPEP 4 PRO B 81 PRO B 82 0 1.89 CISPEP 5 GLN B 249 PRO B 250 0 1.33 CISPEP 6 ASP B 311 GLY B 312 0 -0.90 CISPEP 7 ASP C 254 PRO C 255 0 2.05 CISPEP 8 ASP D 254 PRO D 255 0 -3.88 SITE 1 AC1 5 ASP A 229 THR A 231 ASN A 233 TYR A 235 SITE 2 AC1 5 GLU A 240 SITE 1 AC2 5 ASP B 229 THR B 231 ASN B 233 TYR B 235 SITE 2 AC2 5 GLU B 240 CRYST1 62.730 86.960 65.260 90.00 112.31 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015941 0.000000 0.006541 0.00000 SCALE2 0.000000 0.011500 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016563 0.00000