data_6XH1 # _entry.id 6XH1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6XH1 pdb_00006xh1 10.2210/pdb6xh1/pdb WWPDB D_1000249323 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-10-14 2 'Structure model' 1 1 2020-11-04 3 'Structure model' 1 2 2020-12-16 4 'Structure model' 1 3 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 2 'Structure model' '_citation_author.identifier_ORCID' 11 3 'Structure model' '_citation.journal_volume' 12 3 'Structure model' '_citation.page_first' 13 3 'Structure model' '_citation.page_last' 14 4 'Structure model' '_database_2.pdbx_DOI' 15 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6XH1 _pdbx_database_status.recvd_initial_deposition_date 2020-06-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Chavali, S.S.' 1 0000-0002-3467-2257 'Jenkins, J.L.' 2 0000-0003-2548-3275 'Wedekind, J.E.' 3 0000-0002-4269-4229 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Biol.Chem. _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 295 _citation.language ? _citation.page_first 16470 _citation.page_last 16486 _citation.title ;Co-crystal structures of HIV TAR RNA bound to lab-evolved proteins show key roles for arginine relevant to the design of cyclic peptide TAR inhibitors. ; _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1074/jbc.RA120.015444 _citation.pdbx_database_id_PubMed 33051202 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chavali, S.S.' 1 0000-0002-3467-2257 primary 'Mali, S.M.' 2 ? primary 'Jenkins, J.L.' 3 0000-0003-2548-3275 primary 'Fasan, R.' 4 ? primary 'Wedekind, J.E.' 5 0000-0002-4269-4229 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'TAR binding protein mutant 6.7 Q48R/T50R' 10042.720 1 ? ? ? ? 2 polymer syn 'TRANS-ACTIVATION RESPONSE ELEMENT' 8657.167 1 ? ? ? ? 3 water nat water 18.015 43 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;TRPNHTIYINNLNSKIKKDELKKSLHAIFSRFGQILDILVPRRRRPRGQAFVIFKEVSSATNALRSMQGFPFYDKPMAIQ YAKTDK ; ;TRPNHTIYINNLNSKIKKDELKKSLHAIFSRFGQILDILVPRRRRPRGQAFVIFKEVSSATNALRSMQGFPFYDKPMAIQ YAKTDK ; A ? 2 polyribonucleotide no no GGAGAUCUGAGCCUGGGAGCUCUCUCC GGAGAUCUGAGCCUGGGAGCUCUCUCC D ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 ARG n 1 3 PRO n 1 4 ASN n 1 5 HIS n 1 6 THR n 1 7 ILE n 1 8 TYR n 1 9 ILE n 1 10 ASN n 1 11 ASN n 1 12 LEU n 1 13 ASN n 1 14 SER n 1 15 LYS n 1 16 ILE n 1 17 LYS n 1 18 LYS n 1 19 ASP n 1 20 GLU n 1 21 LEU n 1 22 LYS n 1 23 LYS n 1 24 SER n 1 25 LEU n 1 26 HIS n 1 27 ALA n 1 28 ILE n 1 29 PHE n 1 30 SER n 1 31 ARG n 1 32 PHE n 1 33 GLY n 1 34 GLN n 1 35 ILE n 1 36 LEU n 1 37 ASP n 1 38 ILE n 1 39 LEU n 1 40 VAL n 1 41 PRO n 1 42 ARG n 1 43 ARG n 1 44 ARG n 1 45 ARG n 1 46 PRO n 1 47 ARG n 1 48 GLY n 1 49 GLN n 1 50 ALA n 1 51 PHE n 1 52 VAL n 1 53 ILE n 1 54 PHE n 1 55 LYS n 1 56 GLU n 1 57 VAL n 1 58 SER n 1 59 SER n 1 60 ALA n 1 61 THR n 1 62 ASN n 1 63 ALA n 1 64 LEU n 1 65 ARG n 1 66 SER n 1 67 MET n 1 68 GLN n 1 69 GLY n 1 70 PHE n 1 71 PRO n 1 72 PHE n 1 73 TYR n 1 74 ASP n 1 75 LYS n 1 76 PRO n 1 77 MET n 1 78 ALA n 1 79 ILE n 1 80 GLN n 1 81 TYR n 1 82 ALA n 1 83 LYS n 1 84 THR n 1 85 ASP n 1 86 LYS n 2 1 G n 2 2 G n 2 3 A n 2 4 G n 2 5 A n 2 6 U n 2 7 C n 2 8 U n 2 9 G n 2 10 A n 2 11 G n 2 12 C n 2 13 C n 2 14 U n 2 15 G n 2 16 G n 2 17 G n 2 18 A n 2 19 G n 2 20 C n 2 21 U n 2 22 C n 2 23 U n 2 24 C n 2 25 U n 2 26 C n 2 27 C n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 86 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 27 _pdbx_entity_src_syn.organism_scientific 'Human immunodeficiency virus 1' _pdbx_entity_src_syn.organism_common_name HIV-1 _pdbx_entity_src_syn.ncbi_taxonomy_id 11676 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 6 6 THR THR A . n A 1 2 ARG 2 7 7 ARG ARG A . n A 1 3 PRO 3 8 8 PRO PRO A . n A 1 4 ASN 4 9 9 ASN ASN A . n A 1 5 HIS 5 10 10 HIS HIS A . n A 1 6 THR 6 11 11 THR THR A . n A 1 7 ILE 7 12 12 ILE ILE A . n A 1 8 TYR 8 13 13 TYR TYR A . n A 1 9 ILE 9 14 14 ILE ILE A . n A 1 10 ASN 10 15 15 ASN ASN A . n A 1 11 ASN 11 16 16 ASN ASN A . n A 1 12 LEU 12 17 17 LEU LEU A . n A 1 13 ASN 13 18 18 ASN ASN A . n A 1 14 SER 14 19 19 SER SER A . n A 1 15 LYS 15 20 20 LYS LYS A . n A 1 16 ILE 16 21 21 ILE ILE A . n A 1 17 LYS 17 22 22 LYS LYS A . n A 1 18 LYS 18 23 23 LYS LYS A . n A 1 19 ASP 19 24 24 ASP ASP A . n A 1 20 GLU 20 25 25 GLU GLU A . n A 1 21 LEU 21 26 26 LEU LEU A . n A 1 22 LYS 22 27 27 LYS LYS A . n A 1 23 LYS 23 28 28 LYS LYS A . n A 1 24 SER 24 29 29 SER SER A . n A 1 25 LEU 25 30 30 LEU LEU A . n A 1 26 HIS 26 31 31 HIS HIS A . n A 1 27 ALA 27 32 32 ALA ALA A . n A 1 28 ILE 28 33 33 ILE ILE A . n A 1 29 PHE 29 34 34 PHE PHE A . n A 1 30 SER 30 35 35 SER SER A . n A 1 31 ARG 31 36 36 ARG ARG A . n A 1 32 PHE 32 37 37 PHE PHE A . n A 1 33 GLY 33 38 38 GLY GLY A . n A 1 34 GLN 34 39 39 GLN GLN A . n A 1 35 ILE 35 40 40 ILE ILE A . n A 1 36 LEU 36 41 41 LEU LEU A . n A 1 37 ASP 37 42 42 ASP ASP A . n A 1 38 ILE 38 43 43 ILE ILE A . n A 1 39 LEU 39 44 44 LEU LEU A . n A 1 40 VAL 40 45 45 VAL VAL A . n A 1 41 PRO 41 46 46 PRO PRO A . n A 1 42 ARG 42 47 47 ARG ARG A . n A 1 43 ARG 43 48 48 ARG ARG A . n A 1 44 ARG 44 49 49 ARG ARG A . n A 1 45 ARG 45 50 50 ARG ARG A . n A 1 46 PRO 46 51 51 PRO PRO A . n A 1 47 ARG 47 52 52 ARG ARG A . n A 1 48 GLY 48 53 53 GLY GLY A . n A 1 49 GLN 49 54 54 GLN GLN A . n A 1 50 ALA 50 55 55 ALA ALA A . n A 1 51 PHE 51 56 56 PHE PHE A . n A 1 52 VAL 52 57 57 VAL VAL A . n A 1 53 ILE 53 58 58 ILE ILE A . n A 1 54 PHE 54 59 59 PHE PHE A . n A 1 55 LYS 55 60 60 LYS LYS A . n A 1 56 GLU 56 61 61 GLU GLU A . n A 1 57 VAL 57 62 62 VAL VAL A . n A 1 58 SER 58 63 63 SER SER A . n A 1 59 SER 59 64 64 SER SER A . n A 1 60 ALA 60 65 65 ALA ALA A . n A 1 61 THR 61 66 66 THR THR A . n A 1 62 ASN 62 67 67 ASN ASN A . n A 1 63 ALA 63 68 68 ALA ALA A . n A 1 64 LEU 64 69 69 LEU LEU A . n A 1 65 ARG 65 70 70 ARG ARG A . n A 1 66 SER 66 71 71 SER SER A . n A 1 67 MET 67 72 72 MET MET A . n A 1 68 GLN 68 73 73 GLN GLN A . n A 1 69 GLY 69 74 74 GLY GLY A . n A 1 70 PHE 70 75 75 PHE PHE A . n A 1 71 PRO 71 76 76 PRO PRO A . n A 1 72 PHE 72 77 77 PHE PHE A . n A 1 73 TYR 73 78 78 TYR TYR A . n A 1 74 ASP 74 79 79 ASP ASP A . n A 1 75 LYS 75 80 80 LYS LYS A . n A 1 76 PRO 76 81 81 PRO PRO A . n A 1 77 MET 77 82 82 MET MET A . n A 1 78 ALA 78 83 83 ALA ALA A . n A 1 79 ILE 79 84 84 ILE ILE A . n A 1 80 GLN 80 85 85 GLN GLN A . n A 1 81 TYR 81 86 86 TYR TYR A . n A 1 82 ALA 82 87 87 ALA ALA A . n A 1 83 LYS 83 88 88 LYS LYS A . n A 1 84 THR 84 89 89 THR THR A . n A 1 85 ASP 85 90 90 ASP ASP A . n A 1 86 LYS 86 91 91 LYS LYS A . n B 2 1 G 1 18 18 G G D . n B 2 2 G 2 19 19 G G D . n B 2 3 A 3 20 20 A A D . n B 2 4 G 4 21 21 G G D . n B 2 5 A 5 22 22 A A D . n B 2 6 U 6 23 23 U U D . n B 2 7 C 7 24 24 C C D . n B 2 8 U 8 25 25 U U D . n B 2 9 G 9 26 26 G G D . n B 2 10 A 10 27 27 A A D . n B 2 11 G 11 28 28 G G D . n B 2 12 C 12 29 29 C C D . n B 2 13 C 13 30 30 C C D . n B 2 14 U 14 31 31 U U D . n B 2 15 G 15 32 32 G G D . n B 2 16 G 16 33 33 G G D . n B 2 17 G 17 34 34 G G D . n B 2 18 A 18 35 35 A A D . n B 2 19 G 19 36 36 G G D . n B 2 20 C 20 37 37 C C D . n B 2 21 U 21 38 38 U U D . n B 2 22 C 22 39 39 C C D . n B 2 23 U 23 40 40 U U D . n B 2 24 C 24 41 41 C C D . n B 2 25 U 25 42 42 U U D . n B 2 26 C 26 43 43 C C D . n B 2 27 C 27 44 44 C C D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 101 20 HOH HOH A . C 3 HOH 2 102 27 HOH HOH A . C 3 HOH 3 103 34 HOH HOH A . C 3 HOH 4 104 15 HOH HOH A . C 3 HOH 5 105 66 HOH HOH A . C 3 HOH 6 106 12 HOH HOH A . C 3 HOH 7 107 2 HOH HOH A . C 3 HOH 8 108 21 HOH HOH A . C 3 HOH 9 109 5 HOH HOH A . C 3 HOH 10 110 10 HOH HOH A . C 3 HOH 11 111 43 HOH HOH A . C 3 HOH 12 112 8 HOH HOH A . C 3 HOH 13 113 36 HOH HOH A . C 3 HOH 14 114 18 HOH HOH A . C 3 HOH 15 115 46 HOH HOH A . C 3 HOH 16 116 3 HOH HOH A . C 3 HOH 17 117 50 HOH HOH A . C 3 HOH 18 118 40 HOH HOH A . C 3 HOH 19 119 53 HOH HOH A . C 3 HOH 20 120 35 HOH HOH A . C 3 HOH 21 121 62 HOH HOH A . D 3 HOH 1 101 4 HOH HOH D . D 3 HOH 2 102 17 HOH HOH D . D 3 HOH 3 103 37 HOH HOH D . D 3 HOH 4 104 16 HOH HOH D . D 3 HOH 5 105 25 HOH HOH D . D 3 HOH 6 106 26 HOH HOH D . D 3 HOH 7 107 29 HOH HOH D . D 3 HOH 8 108 19 HOH HOH D . D 3 HOH 9 109 6 HOH HOH D . D 3 HOH 10 110 31 HOH HOH D . D 3 HOH 11 111 42 HOH HOH D . D 3 HOH 12 112 13 HOH HOH D . D 3 HOH 13 113 22 HOH HOH D . D 3 HOH 14 114 11 HOH HOH D . D 3 HOH 15 115 38 HOH HOH D . D 3 HOH 16 116 48 HOH HOH D . D 3 HOH 17 117 65 HOH HOH D . D 3 HOH 18 118 51 HOH HOH D . D 3 HOH 19 119 64 HOH HOH D . D 3 HOH 20 120 52 HOH HOH D . D 3 HOH 21 121 44 HOH HOH D . D 3 HOH 22 122 32 HOH HOH D . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.74 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.15.2_3472 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 'Mar 15, 2019' 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.15.2_3472 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6XH1 _cell.details ? _cell.formula_units_Z ? _cell.length_a 40.226 _cell.length_a_esd ? _cell.length_b 40.226 _cell.length_b_esd ? _cell.length_c 293.949 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XH1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6XH1 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.33 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.3 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M Ammonium Nitrate, 20% (w/v) PEG-3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details 'Rh coated collimating mirrors, K-B focusing mirrors' _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-07-02 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Liquid nitrogen-cooled double crystal, non fixed exit slit' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.980 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRL BEAMLINE BL12-2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.980 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL12-2 _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6XH1 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.60 _reflns.d_resolution_low 39.85 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7660 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.065 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.986 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.72 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 944 _reflns_shell.percent_possible_all 97.7 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 7.9 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.55 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.403 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 146.830 _refine.B_iso_mean 48.9115 _refine.B_iso_min 22.190 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6XH1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.6010 _refine.ls_d_res_low 39.85 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7660 _refine.ls_number_reflns_R_free 561 _refine.ls_number_reflns_R_work 7099 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 92.8300 _refine.ls_percent_reflns_R_free 7.3200 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2185 _refine.ls_R_factor_R_free 0.2549 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2156 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.330 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.7100 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3400 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.6010 _refine_hist.d_res_low 39.85 _refine_hist.number_atoms_solvent 43 _refine_hist.number_atoms_total 1322 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 113 _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent 38.04 _refine_hist.pdbx_number_atoms_protein 707 _refine_hist.pdbx_number_atoms_nucleic_acid 572 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.6012 2.8629 . . 131 1668 90.0000 . . . 0.3465 0.0000 0.2888 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8629 3.2770 . . 142 1728 94.0000 . . . 0.2910 0.0000 0.2559 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2770 4.1280 . . 143 1800 94.0000 . . . 0.2695 0.0000 0.2083 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.1280 39.85 . . 145 1903 92.0000 . . . 0.2064 0.0000 0.1880 . . . . . . . . . . . # _struct.entry_id 6XH1 _struct.title 'Co-crystal structure of HIV-1 TAR RNA in complex with lab-evolved RRM TBP6.7 mutant' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6XH1 _struct_keywords.text ;PROTEIN-RNA COMPLEX, TAR RNA, LAB-EVOLVED PROTEIN, ARGININE FORK, BETA HAIRPIN, MAJOR-GROOVE READOUT, BASE TRIPLE, U1A, HIV-1, TRANS- ACTIVATION, RNA RECOGNITION MOTIF, RRM, RNA BINDING PROTEIN-RNA COMPLEX, RNA BINDING PROTEIN ; _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 6XH1 6XH1 ? 1 ? 1 2 PDB 6XH1 6XH1 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6XH1 A 1 ? 86 ? 6XH1 6 ? 91 ? 6 91 2 2 6XH1 D 1 ? 27 ? 6XH1 18 ? 44 ? 18 44 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'isothermal titration calorimetry' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 17 ? SER A 30 ? LYS A 22 SER A 35 1 ? 14 HELX_P HELX_P2 AA2 ARG A 31 ? GLY A 33 ? ARG A 36 GLY A 38 5 ? 3 HELX_P HELX_P3 AA3 GLU A 56 ? MET A 67 ? GLU A 61 MET A 72 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B G 1 N1 ? ? ? 1_555 B C 27 N3 ? ? D G 18 D C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B G 1 N2 ? ? ? 1_555 B C 27 O2 ? ? D G 18 D C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B G 1 O6 ? ? ? 1_555 B C 27 N4 ? ? D G 18 D C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B G 2 N1 ? ? ? 1_555 B C 26 N3 ? ? D G 19 D C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B G 2 N2 ? ? ? 1_555 B C 26 O2 ? ? D G 19 D C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B G 2 O6 ? ? ? 1_555 B C 26 N4 ? ? D G 19 D C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B A 3 N1 ? ? ? 1_555 B U 25 N3 ? ? D A 20 D U 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B A 3 N6 ? ? ? 1_555 B U 25 O4 ? ? D A 20 D U 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B G 4 N1 ? ? ? 1_555 B C 24 N3 ? ? D G 21 D C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B G 4 N2 ? ? ? 1_555 B C 24 O2 ? ? D G 21 D C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B G 4 O6 ? ? ? 1_555 B C 24 N4 ? ? D G 21 D C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B A 5 N1 ? ? ? 1_555 B U 23 N3 ? ? D A 22 D U 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B A 5 N6 ? ? ? 1_555 B U 23 O4 ? ? D A 22 D U 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B U 6 N3 ? ? ? 1_555 B A 10 N7 ? ? D U 23 D A 27 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog15 hydrog ? ? B U 6 O4 ? ? ? 1_555 B A 10 N6 ? ? D U 23 D A 27 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog16 hydrog ? ? B G 9 N1 ? ? ? 1_555 B C 22 N3 ? ? D G 26 D C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B G 9 N2 ? ? ? 1_555 B C 22 O2 ? ? D G 26 D C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B G 9 O6 ? ? ? 1_555 B C 22 N4 ? ? D G 26 D C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B A 10 N1 ? ? ? 1_555 B U 21 N3 ? ? D A 27 D U 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B A 10 N6 ? ? ? 1_555 B U 21 O4 ? ? D A 27 D U 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B G 11 N1 ? ? ? 1_555 B C 20 N3 ? ? D G 28 D C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B G 11 N2 ? ? ? 1_555 B C 20 O2 ? ? D G 28 D C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B G 11 O6 ? ? ? 1_555 B C 20 N4 ? ? D G 28 D C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B C 12 N3 ? ? ? 1_555 B G 19 N1 ? ? D C 29 D G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B C 12 N4 ? ? ? 1_555 B G 19 O6 ? ? D C 29 D G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B C 12 O2 ? ? ? 1_555 B G 19 N2 ? ? D C 29 D G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B C 13 N3 ? ? ? 1_555 B G 17 N1 ? ? D C 30 D G 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B C 13 N4 ? ? ? 1_555 B G 17 O6 ? ? D C 30 D G 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B C 13 O2 ? ? ? 1_555 B G 17 N2 ? ? D C 30 D G 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 35 ? LEU A 39 ? ILE A 40 LEU A 44 AA1 2 GLN A 49 ? PHE A 54 ? GLN A 54 PHE A 59 AA1 3 THR A 6 ? ASN A 10 ? THR A 11 ASN A 15 AA1 4 ALA A 78 ? TYR A 81 ? ALA A 83 TYR A 86 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 36 ? N LEU A 41 O ILE A 53 ? O ILE A 58 AA1 2 3 O ALA A 50 ? O ALA A 55 N ILE A 9 ? N ILE A 14 AA1 3 4 N TYR A 8 ? N TYR A 13 O GLN A 80 ? O GLN A 85 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OG _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 SER _pdbx_validate_symm_contact.auth_seq_id_1 29 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 NH2 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 ARG _pdbx_validate_symm_contact.auth_seq_id_2 70 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 6_557 _pdbx_validate_symm_contact.dist 2.10 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 G OP3 O N N 146 G P P N N 147 G OP1 O N N 148 G OP2 O N N 149 G "O5'" O N N 150 G "C5'" C N N 151 G "C4'" C N R 152 G "O4'" O N N 153 G "C3'" C N S 154 G "O3'" O N N 155 G "C2'" C N R 156 G "O2'" O N N 157 G "C1'" C N R 158 G N9 N Y N 159 G C8 C Y N 160 G N7 N Y N 161 G C5 C Y N 162 G C6 C N N 163 G O6 O N N 164 G N1 N N N 165 G C2 C N N 166 G N2 N N N 167 G N3 N N N 168 G C4 C Y N 169 G HOP3 H N N 170 G HOP2 H N N 171 G "H5'" H N N 172 G "H5''" H N N 173 G "H4'" H N N 174 G "H3'" H N N 175 G "HO3'" H N N 176 G "H2'" H N N 177 G "HO2'" H N N 178 G "H1'" H N N 179 G H8 H N N 180 G H1 H N N 181 G H21 H N N 182 G H22 H N N 183 GLN N N N N 184 GLN CA C N S 185 GLN C C N N 186 GLN O O N N 187 GLN CB C N N 188 GLN CG C N N 189 GLN CD C N N 190 GLN OE1 O N N 191 GLN NE2 N N N 192 GLN OXT O N N 193 GLN H H N N 194 GLN H2 H N N 195 GLN HA H N N 196 GLN HB2 H N N 197 GLN HB3 H N N 198 GLN HG2 H N N 199 GLN HG3 H N N 200 GLN HE21 H N N 201 GLN HE22 H N N 202 GLN HXT H N N 203 GLU N N N N 204 GLU CA C N S 205 GLU C C N N 206 GLU O O N N 207 GLU CB C N N 208 GLU CG C N N 209 GLU CD C N N 210 GLU OE1 O N N 211 GLU OE2 O N N 212 GLU OXT O N N 213 GLU H H N N 214 GLU H2 H N N 215 GLU HA H N N 216 GLU HB2 H N N 217 GLU HB3 H N N 218 GLU HG2 H N N 219 GLU HG3 H N N 220 GLU HE2 H N N 221 GLU HXT H N N 222 GLY N N N N 223 GLY CA C N N 224 GLY C C N N 225 GLY O O N N 226 GLY OXT O N N 227 GLY H H N N 228 GLY H2 H N N 229 GLY HA2 H N N 230 GLY HA3 H N N 231 GLY HXT H N N 232 HIS N N N N 233 HIS CA C N S 234 HIS C C N N 235 HIS O O N N 236 HIS CB C N N 237 HIS CG C Y N 238 HIS ND1 N Y N 239 HIS CD2 C Y N 240 HIS CE1 C Y N 241 HIS NE2 N Y N 242 HIS OXT O N N 243 HIS H H N N 244 HIS H2 H N N 245 HIS HA H N N 246 HIS HB2 H N N 247 HIS HB3 H N N 248 HIS HD1 H N N 249 HIS HD2 H N N 250 HIS HE1 H N N 251 HIS HE2 H N N 252 HIS HXT H N N 253 HOH O O N N 254 HOH H1 H N N 255 HOH H2 H N N 256 ILE N N N N 257 ILE CA C N S 258 ILE C C N N 259 ILE O O N N 260 ILE CB C N S 261 ILE CG1 C N N 262 ILE CG2 C N N 263 ILE CD1 C N N 264 ILE OXT O N N 265 ILE H H N N 266 ILE H2 H N N 267 ILE HA H N N 268 ILE HB H N N 269 ILE HG12 H N N 270 ILE HG13 H N N 271 ILE HG21 H N N 272 ILE HG22 H N N 273 ILE HG23 H N N 274 ILE HD11 H N N 275 ILE HD12 H N N 276 ILE HD13 H N N 277 ILE HXT H N N 278 LEU N N N N 279 LEU CA C N S 280 LEU C C N N 281 LEU O O N N 282 LEU CB C N N 283 LEU CG C N N 284 LEU CD1 C N N 285 LEU CD2 C N N 286 LEU OXT O N N 287 LEU H H N N 288 LEU H2 H N N 289 LEU HA H N N 290 LEU HB2 H N N 291 LEU HB3 H N N 292 LEU HG H N N 293 LEU HD11 H N N 294 LEU HD12 H N N 295 LEU HD13 H N N 296 LEU HD21 H N N 297 LEU HD22 H N N 298 LEU HD23 H N N 299 LEU HXT H N N 300 LYS N N N N 301 LYS CA C N S 302 LYS C C N N 303 LYS O O N N 304 LYS CB C N N 305 LYS CG C N N 306 LYS CD C N N 307 LYS CE C N N 308 LYS NZ N N N 309 LYS OXT O N N 310 LYS H H N N 311 LYS H2 H N N 312 LYS HA H N N 313 LYS HB2 H N N 314 LYS HB3 H N N 315 LYS HG2 H N N 316 LYS HG3 H N N 317 LYS HD2 H N N 318 LYS HD3 H N N 319 LYS HE2 H N N 320 LYS HE3 H N N 321 LYS HZ1 H N N 322 LYS HZ2 H N N 323 LYS HZ3 H N N 324 LYS HXT H N N 325 MET N N N N 326 MET CA C N S 327 MET C C N N 328 MET O O N N 329 MET CB C N N 330 MET CG C N N 331 MET SD S N N 332 MET CE C N N 333 MET OXT O N N 334 MET H H N N 335 MET H2 H N N 336 MET HA H N N 337 MET HB2 H N N 338 MET HB3 H N N 339 MET HG2 H N N 340 MET HG3 H N N 341 MET HE1 H N N 342 MET HE2 H N N 343 MET HE3 H N N 344 MET HXT H N N 345 PHE N N N N 346 PHE CA C N S 347 PHE C C N N 348 PHE O O N N 349 PHE CB C N N 350 PHE CG C Y N 351 PHE CD1 C Y N 352 PHE CD2 C Y N 353 PHE CE1 C Y N 354 PHE CE2 C Y N 355 PHE CZ C Y N 356 PHE OXT O N N 357 PHE H H N N 358 PHE H2 H N N 359 PHE HA H N N 360 PHE HB2 H N N 361 PHE HB3 H N N 362 PHE HD1 H N N 363 PHE HD2 H N N 364 PHE HE1 H N N 365 PHE HE2 H N N 366 PHE HZ H N N 367 PHE HXT H N N 368 PRO N N N N 369 PRO CA C N S 370 PRO C C N N 371 PRO O O N N 372 PRO CB C N N 373 PRO CG C N N 374 PRO CD C N N 375 PRO OXT O N N 376 PRO H H N N 377 PRO HA H N N 378 PRO HB2 H N N 379 PRO HB3 H N N 380 PRO HG2 H N N 381 PRO HG3 H N N 382 PRO HD2 H N N 383 PRO HD3 H N N 384 PRO HXT H N N 385 SER N N N N 386 SER CA C N S 387 SER C C N N 388 SER O O N N 389 SER CB C N N 390 SER OG O N N 391 SER OXT O N N 392 SER H H N N 393 SER H2 H N N 394 SER HA H N N 395 SER HB2 H N N 396 SER HB3 H N N 397 SER HG H N N 398 SER HXT H N N 399 THR N N N N 400 THR CA C N S 401 THR C C N N 402 THR O O N N 403 THR CB C N R 404 THR OG1 O N N 405 THR CG2 C N N 406 THR OXT O N N 407 THR H H N N 408 THR H2 H N N 409 THR HA H N N 410 THR HB H N N 411 THR HG1 H N N 412 THR HG21 H N N 413 THR HG22 H N N 414 THR HG23 H N N 415 THR HXT H N N 416 TYR N N N N 417 TYR CA C N S 418 TYR C C N N 419 TYR O O N N 420 TYR CB C N N 421 TYR CG C Y N 422 TYR CD1 C Y N 423 TYR CD2 C Y N 424 TYR CE1 C Y N 425 TYR CE2 C Y N 426 TYR CZ C Y N 427 TYR OH O N N 428 TYR OXT O N N 429 TYR H H N N 430 TYR H2 H N N 431 TYR HA H N N 432 TYR HB2 H N N 433 TYR HB3 H N N 434 TYR HD1 H N N 435 TYR HD2 H N N 436 TYR HE1 H N N 437 TYR HE2 H N N 438 TYR HH H N N 439 TYR HXT H N N 440 U OP3 O N N 441 U P P N N 442 U OP1 O N N 443 U OP2 O N N 444 U "O5'" O N N 445 U "C5'" C N N 446 U "C4'" C N R 447 U "O4'" O N N 448 U "C3'" C N S 449 U "O3'" O N N 450 U "C2'" C N R 451 U "O2'" O N N 452 U "C1'" C N R 453 U N1 N N N 454 U C2 C N N 455 U O2 O N N 456 U N3 N N N 457 U C4 C N N 458 U O4 O N N 459 U C5 C N N 460 U C6 C N N 461 U HOP3 H N N 462 U HOP2 H N N 463 U "H5'" H N N 464 U "H5''" H N N 465 U "H4'" H N N 466 U "H3'" H N N 467 U "HO3'" H N N 468 U "H2'" H N N 469 U "HO2'" H N N 470 U "H1'" H N N 471 U H3 H N N 472 U H5 H N N 473 U H6 H N N 474 VAL N N N N 475 VAL CA C N S 476 VAL C C N N 477 VAL O O N N 478 VAL CB C N N 479 VAL CG1 C N N 480 VAL CG2 C N N 481 VAL OXT O N N 482 VAL H H N N 483 VAL H2 H N N 484 VAL HA H N N 485 VAL HB H N N 486 VAL HG11 H N N 487 VAL HG12 H N N 488 VAL HG13 H N N 489 VAL HG21 H N N 490 VAL HG22 H N N 491 VAL HG23 H N N 492 VAL HXT H N N 493 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 G OP3 P sing N N 145 G OP3 HOP3 sing N N 146 G P OP1 doub N N 147 G P OP2 sing N N 148 G P "O5'" sing N N 149 G OP2 HOP2 sing N N 150 G "O5'" "C5'" sing N N 151 G "C5'" "C4'" sing N N 152 G "C5'" "H5'" sing N N 153 G "C5'" "H5''" sing N N 154 G "C4'" "O4'" sing N N 155 G "C4'" "C3'" sing N N 156 G "C4'" "H4'" sing N N 157 G "O4'" "C1'" sing N N 158 G "C3'" "O3'" sing N N 159 G "C3'" "C2'" sing N N 160 G "C3'" "H3'" sing N N 161 G "O3'" "HO3'" sing N N 162 G "C2'" "O2'" sing N N 163 G "C2'" "C1'" sing N N 164 G "C2'" "H2'" sing N N 165 G "O2'" "HO2'" sing N N 166 G "C1'" N9 sing N N 167 G "C1'" "H1'" sing N N 168 G N9 C8 sing Y N 169 G N9 C4 sing Y N 170 G C8 N7 doub Y N 171 G C8 H8 sing N N 172 G N7 C5 sing Y N 173 G C5 C6 sing N N 174 G C5 C4 doub Y N 175 G C6 O6 doub N N 176 G C6 N1 sing N N 177 G N1 C2 sing N N 178 G N1 H1 sing N N 179 G C2 N2 sing N N 180 G C2 N3 doub N N 181 G N2 H21 sing N N 182 G N2 H22 sing N N 183 G N3 C4 sing N N 184 GLN N CA sing N N 185 GLN N H sing N N 186 GLN N H2 sing N N 187 GLN CA C sing N N 188 GLN CA CB sing N N 189 GLN CA HA sing N N 190 GLN C O doub N N 191 GLN C OXT sing N N 192 GLN CB CG sing N N 193 GLN CB HB2 sing N N 194 GLN CB HB3 sing N N 195 GLN CG CD sing N N 196 GLN CG HG2 sing N N 197 GLN CG HG3 sing N N 198 GLN CD OE1 doub N N 199 GLN CD NE2 sing N N 200 GLN NE2 HE21 sing N N 201 GLN NE2 HE22 sing N N 202 GLN OXT HXT sing N N 203 GLU N CA sing N N 204 GLU N H sing N N 205 GLU N H2 sing N N 206 GLU CA C sing N N 207 GLU CA CB sing N N 208 GLU CA HA sing N N 209 GLU C O doub N N 210 GLU C OXT sing N N 211 GLU CB CG sing N N 212 GLU CB HB2 sing N N 213 GLU CB HB3 sing N N 214 GLU CG CD sing N N 215 GLU CG HG2 sing N N 216 GLU CG HG3 sing N N 217 GLU CD OE1 doub N N 218 GLU CD OE2 sing N N 219 GLU OE2 HE2 sing N N 220 GLU OXT HXT sing N N 221 GLY N CA sing N N 222 GLY N H sing N N 223 GLY N H2 sing N N 224 GLY CA C sing N N 225 GLY CA HA2 sing N N 226 GLY CA HA3 sing N N 227 GLY C O doub N N 228 GLY C OXT sing N N 229 GLY OXT HXT sing N N 230 HIS N CA sing N N 231 HIS N H sing N N 232 HIS N H2 sing N N 233 HIS CA C sing N N 234 HIS CA CB sing N N 235 HIS CA HA sing N N 236 HIS C O doub N N 237 HIS C OXT sing N N 238 HIS CB CG sing N N 239 HIS CB HB2 sing N N 240 HIS CB HB3 sing N N 241 HIS CG ND1 sing Y N 242 HIS CG CD2 doub Y N 243 HIS ND1 CE1 doub Y N 244 HIS ND1 HD1 sing N N 245 HIS CD2 NE2 sing Y N 246 HIS CD2 HD2 sing N N 247 HIS CE1 NE2 sing Y N 248 HIS CE1 HE1 sing N N 249 HIS NE2 HE2 sing N N 250 HIS OXT HXT sing N N 251 HOH O H1 sing N N 252 HOH O H2 sing N N 253 ILE N CA sing N N 254 ILE N H sing N N 255 ILE N H2 sing N N 256 ILE CA C sing N N 257 ILE CA CB sing N N 258 ILE CA HA sing N N 259 ILE C O doub N N 260 ILE C OXT sing N N 261 ILE CB CG1 sing N N 262 ILE CB CG2 sing N N 263 ILE CB HB sing N N 264 ILE CG1 CD1 sing N N 265 ILE CG1 HG12 sing N N 266 ILE CG1 HG13 sing N N 267 ILE CG2 HG21 sing N N 268 ILE CG2 HG22 sing N N 269 ILE CG2 HG23 sing N N 270 ILE CD1 HD11 sing N N 271 ILE CD1 HD12 sing N N 272 ILE CD1 HD13 sing N N 273 ILE OXT HXT sing N N 274 LEU N CA sing N N 275 LEU N H sing N N 276 LEU N H2 sing N N 277 LEU CA C sing N N 278 LEU CA CB sing N N 279 LEU CA HA sing N N 280 LEU C O doub N N 281 LEU C OXT sing N N 282 LEU CB CG sing N N 283 LEU CB HB2 sing N N 284 LEU CB HB3 sing N N 285 LEU CG CD1 sing N N 286 LEU CG CD2 sing N N 287 LEU CG HG sing N N 288 LEU CD1 HD11 sing N N 289 LEU CD1 HD12 sing N N 290 LEU CD1 HD13 sing N N 291 LEU CD2 HD21 sing N N 292 LEU CD2 HD22 sing N N 293 LEU CD2 HD23 sing N N 294 LEU OXT HXT sing N N 295 LYS N CA sing N N 296 LYS N H sing N N 297 LYS N H2 sing N N 298 LYS CA C sing N N 299 LYS CA CB sing N N 300 LYS CA HA sing N N 301 LYS C O doub N N 302 LYS C OXT sing N N 303 LYS CB CG sing N N 304 LYS CB HB2 sing N N 305 LYS CB HB3 sing N N 306 LYS CG CD sing N N 307 LYS CG HG2 sing N N 308 LYS CG HG3 sing N N 309 LYS CD CE sing N N 310 LYS CD HD2 sing N N 311 LYS CD HD3 sing N N 312 LYS CE NZ sing N N 313 LYS CE HE2 sing N N 314 LYS CE HE3 sing N N 315 LYS NZ HZ1 sing N N 316 LYS NZ HZ2 sing N N 317 LYS NZ HZ3 sing N N 318 LYS OXT HXT sing N N 319 MET N CA sing N N 320 MET N H sing N N 321 MET N H2 sing N N 322 MET CA C sing N N 323 MET CA CB sing N N 324 MET CA HA sing N N 325 MET C O doub N N 326 MET C OXT sing N N 327 MET CB CG sing N N 328 MET CB HB2 sing N N 329 MET CB HB3 sing N N 330 MET CG SD sing N N 331 MET CG HG2 sing N N 332 MET CG HG3 sing N N 333 MET SD CE sing N N 334 MET CE HE1 sing N N 335 MET CE HE2 sing N N 336 MET CE HE3 sing N N 337 MET OXT HXT sing N N 338 PHE N CA sing N N 339 PHE N H sing N N 340 PHE N H2 sing N N 341 PHE CA C sing N N 342 PHE CA CB sing N N 343 PHE CA HA sing N N 344 PHE C O doub N N 345 PHE C OXT sing N N 346 PHE CB CG sing N N 347 PHE CB HB2 sing N N 348 PHE CB HB3 sing N N 349 PHE CG CD1 doub Y N 350 PHE CG CD2 sing Y N 351 PHE CD1 CE1 sing Y N 352 PHE CD1 HD1 sing N N 353 PHE CD2 CE2 doub Y N 354 PHE CD2 HD2 sing N N 355 PHE CE1 CZ doub Y N 356 PHE CE1 HE1 sing N N 357 PHE CE2 CZ sing Y N 358 PHE CE2 HE2 sing N N 359 PHE CZ HZ sing N N 360 PHE OXT HXT sing N N 361 PRO N CA sing N N 362 PRO N CD sing N N 363 PRO N H sing N N 364 PRO CA C sing N N 365 PRO CA CB sing N N 366 PRO CA HA sing N N 367 PRO C O doub N N 368 PRO C OXT sing N N 369 PRO CB CG sing N N 370 PRO CB HB2 sing N N 371 PRO CB HB3 sing N N 372 PRO CG CD sing N N 373 PRO CG HG2 sing N N 374 PRO CG HG3 sing N N 375 PRO CD HD2 sing N N 376 PRO CD HD3 sing N N 377 PRO OXT HXT sing N N 378 SER N CA sing N N 379 SER N H sing N N 380 SER N H2 sing N N 381 SER CA C sing N N 382 SER CA CB sing N N 383 SER CA HA sing N N 384 SER C O doub N N 385 SER C OXT sing N N 386 SER CB OG sing N N 387 SER CB HB2 sing N N 388 SER CB HB3 sing N N 389 SER OG HG sing N N 390 SER OXT HXT sing N N 391 THR N CA sing N N 392 THR N H sing N N 393 THR N H2 sing N N 394 THR CA C sing N N 395 THR CA CB sing N N 396 THR CA HA sing N N 397 THR C O doub N N 398 THR C OXT sing N N 399 THR CB OG1 sing N N 400 THR CB CG2 sing N N 401 THR CB HB sing N N 402 THR OG1 HG1 sing N N 403 THR CG2 HG21 sing N N 404 THR CG2 HG22 sing N N 405 THR CG2 HG23 sing N N 406 THR OXT HXT sing N N 407 TYR N CA sing N N 408 TYR N H sing N N 409 TYR N H2 sing N N 410 TYR CA C sing N N 411 TYR CA CB sing N N 412 TYR CA HA sing N N 413 TYR C O doub N N 414 TYR C OXT sing N N 415 TYR CB CG sing N N 416 TYR CB HB2 sing N N 417 TYR CB HB3 sing N N 418 TYR CG CD1 doub Y N 419 TYR CG CD2 sing Y N 420 TYR CD1 CE1 sing Y N 421 TYR CD1 HD1 sing N N 422 TYR CD2 CE2 doub Y N 423 TYR CD2 HD2 sing N N 424 TYR CE1 CZ doub Y N 425 TYR CE1 HE1 sing N N 426 TYR CE2 CZ sing Y N 427 TYR CE2 HE2 sing N N 428 TYR CZ OH sing N N 429 TYR OH HH sing N N 430 TYR OXT HXT sing N N 431 U OP3 P sing N N 432 U OP3 HOP3 sing N N 433 U P OP1 doub N N 434 U P OP2 sing N N 435 U P "O5'" sing N N 436 U OP2 HOP2 sing N N 437 U "O5'" "C5'" sing N N 438 U "C5'" "C4'" sing N N 439 U "C5'" "H5'" sing N N 440 U "C5'" "H5''" sing N N 441 U "C4'" "O4'" sing N N 442 U "C4'" "C3'" sing N N 443 U "C4'" "H4'" sing N N 444 U "O4'" "C1'" sing N N 445 U "C3'" "O3'" sing N N 446 U "C3'" "C2'" sing N N 447 U "C3'" "H3'" sing N N 448 U "O3'" "HO3'" sing N N 449 U "C2'" "O2'" sing N N 450 U "C2'" "C1'" sing N N 451 U "C2'" "H2'" sing N N 452 U "O2'" "HO2'" sing N N 453 U "C1'" N1 sing N N 454 U "C1'" "H1'" sing N N 455 U N1 C2 sing N N 456 U N1 C6 sing N N 457 U C2 O2 doub N N 458 U C2 N3 sing N N 459 U N3 C4 sing N N 460 U N3 H3 sing N N 461 U C4 O4 doub N N 462 U C4 C5 sing N N 463 U C5 C6 doub N N 464 U C5 H5 sing N N 465 U C6 H6 sing N N 466 VAL N CA sing N N 467 VAL N H sing N N 468 VAL N H2 sing N N 469 VAL CA C sing N N 470 VAL CA CB sing N N 471 VAL CA HA sing N N 472 VAL C O doub N N 473 VAL C OXT sing N N 474 VAL CB CG1 sing N N 475 VAL CB CG2 sing N N 476 VAL CB HB sing N N 477 VAL CG1 HG11 sing N N 478 VAL CG1 HG12 sing N N 479 VAL CG1 HG13 sing N N 480 VAL CG2 HG21 sing N N 481 VAL CG2 HG22 sing N N 482 VAL CG2 HG23 sing N N 483 VAL OXT HXT sing N N 484 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6XH1 'double helix' 6XH1 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B G 1 1_555 B C 27 1_555 -0.282 -0.194 0.137 -3.575 -13.129 -1.691 1 D_G18:C44_D D 18 ? D 44 ? 19 1 1 B G 2 1_555 B C 26 1_555 -0.194 -0.183 -0.306 -11.842 -15.586 1.515 2 D_G19:C43_D D 19 ? D 43 ? 19 1 1 B A 3 1_555 B U 25 1_555 0.514 -0.061 -0.048 -12.682 -15.867 0.567 3 D_A20:U42_D D 20 ? D 42 ? 20 1 1 B G 4 1_555 B C 24 1_555 -0.239 -0.170 0.240 -12.430 -14.800 2.174 4 D_G21:C41_D D 21 ? D 41 ? 19 1 1 B A 5 1_555 B U 23 1_555 0.081 -0.232 0.154 -13.397 -13.414 0.378 5 D_A22:U40_D D 22 ? D 40 ? 20 1 1 B G 9 1_555 B C 22 1_555 -0.364 -0.248 0.027 -6.831 -6.844 3.687 6 D_G26:C39_D D 26 ? D 39 ? 19 1 1 B A 10 1_555 B U 21 1_555 -0.103 -0.063 0.027 -3.530 -2.319 3.962 7 D_A27:U38_D D 27 ? D 38 ? 20 1 1 B G 11 1_555 B C 20 1_555 -0.378 -0.176 -0.133 8.674 -3.444 -6.349 8 D_G28:C37_D D 28 ? D 37 ? 19 1 1 B C 12 1_555 B G 19 1_555 -0.225 -0.092 -0.594 20.082 -5.325 3.201 9 D_C29:G36_D D 29 ? D 36 ? 19 1 1 B C 13 1_555 B G 17 1_555 0.204 0.146 -0.818 22.731 2.441 5.545 10 D_C30:G34_D D 30 ? D 34 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B G 1 1_555 B C 27 1_555 B G 2 1_555 B C 26 1_555 0.002 -1.644 3.389 0.777 8.356 35.434 -3.774 0.103 2.938 13.497 -1.254 36.383 1 DD_G18G19:C43C44_DD D 18 ? D 44 ? D 19 ? D 43 ? 1 B G 2 1_555 B C 26 1_555 B A 3 1_555 B U 25 1_555 0.013 -1.260 3.195 -1.447 9.309 34.848 -3.262 -0.212 2.776 15.202 2.363 36.061 2 DD_G19A20:U42C43_DD D 19 ? D 43 ? D 20 ? D 42 ? 1 B A 3 1_555 B U 25 1_555 B G 4 1_555 B C 24 1_555 0.555 -2.033 3.077 1.510 7.350 27.430 -5.604 -0.830 2.485 15.144 -3.112 28.419 3 DD_A20G21:C41U42_DD D 20 ? D 42 ? D 21 ? D 41 ? 1 B G 4 1_555 B C 24 1_555 B A 5 1_555 B U 23 1_555 -0.265 -1.588 3.246 1.211 4.764 35.062 -3.284 0.607 3.001 7.859 -1.998 35.394 4 DD_G21A22:U40C41_DD D 21 ? D 41 ? D 22 ? D 40 ? 1 B A 5 1_555 B U 23 1_555 B G 9 1_555 B C 22 1_555 -1.641 -1.494 3.052 2.853 1.857 50.286 -1.875 2.113 2.908 2.183 -3.353 50.394 5 DD_A22G26:C39U40_DD D 22 ? D 40 ? D 26 ? D 39 ? 1 B G 9 1_555 B C 22 1_555 B A 10 1_555 B U 21 1_555 -0.355 -2.458 3.218 -0.399 -2.997 27.199 -4.434 0.649 3.468 -6.349 0.846 27.363 6 DD_G26A27:U38C39_DD D 26 ? D 39 ? D 27 ? D 38 ? 1 B A 10 1_555 B U 21 1_555 B G 11 1_555 B C 20 1_555 -1.204 -1.750 3.106 -0.202 -0.945 28.362 -3.360 2.411 3.170 -1.929 0.412 28.378 7 DD_A27G28:C37U38_DD D 27 ? D 38 ? D 28 ? D 37 ? 1 B G 11 1_555 B C 20 1_555 B C 12 1_555 B G 19 1_555 1.122 -1.925 3.125 1.970 -1.599 28.740 -3.513 -1.820 3.293 -3.213 -3.958 28.850 8 DD_G28C29:G36C37_DD D 28 ? D 37 ? D 29 ? D 36 ? 1 B C 12 1_555 B G 19 1_555 B C 13 1_555 B G 17 1_555 1.884 -1.789 3.559 -6.014 -1.198 45.969 -2.165 -2.934 3.343 -1.527 7.660 46.354 9 DD_C29C30:G34G36_DD D 29 ? D 36 ? D 30 ? D 34 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number AI150463 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 6XH1 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.024860 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024860 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003402 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P S # loop_