HEADER OXIDOREDUCTASE 18-JUN-20 6XHK TITLE CRYSTAL STRUCTURE OF S. AUREUS TARJ IN COMPLEX WITH NADPH COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBULOSE-5-PHOSPHATE REDUCTASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RIBULOSE-5-P REDUCTASE 1,RIBITOL-5-PHOSPHATE DEHYDROGENASE COMPND 5 1; COMPND 6 EC: 1.1.1.405; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS (STRAIN NCTC 8325); SOURCE 3 ORGANISM_TAXID: 93061; SOURCE 4 STRAIN: NCTC 8325; SOURCE 5 GENE: TARJ, SAOUHSC_00226; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ALCOHOL DEHYDROGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR F.K.K.LI,N.C.J.STRYNADKA REVDAT 3 18-OCT-23 6XHK 1 REMARK REVDAT 2 05-MAY-21 6XHK 1 JRNL REVDAT 1 21-APR-21 6XHK 0 JRNL AUTH F.K.K.LI,R.T.GALE,E.V.PETROTCHENKO,C.H.BORCHERS,E.D.BROWN, JRNL AUTH 2 N.C.J.STRYNADKA JRNL TITL CRYSTALLOGRAPHIC ANALYSIS OF TARI AND TARJ, A JRNL TITL 2 CYTIDYLYLTRANSFERASE AND REDUCTASE PAIR FOR CDP-RIBITOL JRNL TITL 3 SYNTHESIS IN STAPHYLOCOCCUS AUREUS WALL TEICHOIC ACID JRNL TITL 4 BIOGENESIS. JRNL REF J.STRUCT.BIOL. V. 213 07733 2021 JRNL REFN ESSN 1095-8657 JRNL PMID 33819634 JRNL DOI 10.1016/J.JSB.2021.107733 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 16493 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 825 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.7940 - 5.4493 1.00 2828 149 0.2034 0.2518 REMARK 3 2 5.4493 - 4.3262 1.00 2622 138 0.1691 0.2225 REMARK 3 3 4.3262 - 3.7795 1.00 2597 137 0.1831 0.2404 REMARK 3 4 3.7795 - 3.4341 1.00 2545 134 0.2218 0.2779 REMARK 3 5 3.4341 - 3.1880 1.00 2541 134 0.2567 0.3518 REMARK 3 6 3.1880 - 3.0001 1.00 2535 133 0.3603 0.4429 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.540 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.830 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 105.8 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.9391 8.0898 12.0063 REMARK 3 T TENSOR REMARK 3 T11: 1.1385 T22: 0.8580 REMARK 3 T33: 1.2119 T12: 0.2256 REMARK 3 T13: -0.1783 T23: -0.1553 REMARK 3 L TENSOR REMARK 3 L11: 2.2597 L22: 2.1424 REMARK 3 L33: 1.9751 L12: 2.1783 REMARK 3 L13: -0.3290 L23: 0.0133 REMARK 3 S TENSOR REMARK 3 S11: -0.1326 S12: -0.4201 S13: -0.2182 REMARK 3 S21: 0.0148 S22: -0.1469 S23: -0.6455 REMARK 3 S31: -0.0843 S32: -0.0715 S33: -0.0304 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 74 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.0718 5.1302 12.1231 REMARK 3 T TENSOR REMARK 3 T11: 1.0737 T22: 1.1050 REMARK 3 T33: 0.9455 T12: 0.1674 REMARK 3 T13: -0.0008 T23: -0.2051 REMARK 3 L TENSOR REMARK 3 L11: 2.2976 L22: 3.2382 REMARK 3 L33: 1.6021 L12: 0.5290 REMARK 3 L13: -1.2150 L23: -0.0301 REMARK 3 S TENSOR REMARK 3 S11: -0.1265 S12: 0.0755 S13: -0.3109 REMARK 3 S21: 0.1992 S22: 0.0443 S23: 0.1370 REMARK 3 S31: -0.0811 S32: -0.6959 S33: 0.0009 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 141 THROUGH 245 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.7190 27.0111 31.7835 REMARK 3 T TENSOR REMARK 3 T11: 1.3380 T22: 0.8654 REMARK 3 T33: 0.8287 T12: 0.4664 REMARK 3 T13: -0.0344 T23: -0.0481 REMARK 3 L TENSOR REMARK 3 L11: 3.0343 L22: 5.4439 REMARK 3 L33: 3.4490 L12: -0.9266 REMARK 3 L13: 1.1338 L23: 0.9611 REMARK 3 S TENSOR REMARK 3 S11: 0.0998 S12: 0.1909 S13: -0.0645 REMARK 3 S21: 0.1010 S22: -0.0976 S23: 0.2178 REMARK 3 S31: -0.3461 S32: -0.5085 S33: 0.0044 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 246 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.1883 20.1989 23.2284 REMARK 3 T TENSOR REMARK 3 T11: 1.2355 T22: 0.8044 REMARK 3 T33: 0.9787 T12: 0.4070 REMARK 3 T13: -0.0052 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 0.8387 L22: 1.3917 REMARK 3 L33: 4.7317 L12: -0.2002 REMARK 3 L13: -0.6696 L23: 1.7384 REMARK 3 S TENSOR REMARK 3 S11: 0.0279 S12: 0.2357 S13: 0.0817 REMARK 3 S21: -0.2422 S22: 0.2327 S23: -0.1993 REMARK 3 S31: -0.4805 S32: -0.4066 S33: -0.0034 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6XHK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1000250160. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16503 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 48.794 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 18.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.2200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.420 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4ILK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.1 M AMMONIUM PHOSPHATE MONOBASIC, REMARK 280 0.1 M SODIUM CITRATE PH 5.6, 5 MM NADPH, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 179.17133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 89.58567 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 179.17133 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 89.58567 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 179.17133 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 89.58567 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 179.17133 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 89.58567 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 48 REMARK 465 ARG A 49 REMARK 465 THR A 92 REMARK 465 GLU A 93 REMARK 465 LYS A 94 REMARK 465 ASP A 95 REMARK 465 ASP A 96 REMARK 465 VAL A 97 REMARK 465 ILE A 98 REMARK 465 ALA A 99 REMARK 465 GLU A 100 REMARK 465 ASN A 101 REMARK 465 TYR A 102 REMARK 465 LEU A 103 REMARK 465 LYS A 104 REMARK 465 SER A 105 REMARK 465 SER A 106 REMARK 465 TYR A 107 REMARK 465 PHE A 108 REMARK 465 ARG A 109 REMARK 465 SER A 110 REMARK 465 SER A 111 REMARK 465 GLY A 112 REMARK 465 HIS A 113 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 12 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 50 CG OD1 OD2 REMARK 470 GLU A 51 CG CD OE1 OE2 REMARK 470 ASN A 52 CG OD1 ND2 REMARK 470 VAL A 53 CG1 CG2 REMARK 470 LEU A 54 CG CD1 CD2 REMARK 470 SER A 55 OG REMARK 470 GLN A 56 CG CD OE1 NE2 REMARK 470 LYS A 57 CG CD CE NZ REMARK 470 LEU A 58 CG CD1 CD2 REMARK 470 LYS A 75 CG CD CE NZ REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 ARG A 127 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 133 CG OD1 OD2 REMARK 470 GLU A 157 CG CD OE1 OE2 REMARK 470 LYS A 158 CG CD CE NZ REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 ASN A 163 CG OD1 ND2 REMARK 470 LYS A 164 CG CD CE NZ REMARK 470 LYS A 185 CG CD CE NZ REMARK 470 GLU A 189 CG CD OE1 OE2 REMARK 470 LYS A 191 CG CD CE NZ REMARK 470 GLU A 219 CG CD OE1 OE2 REMARK 470 ARG A 233 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 259 CG CD OE1 OE2 REMARK 470 ARG A 267 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 271 CG CD OE1 OE2 REMARK 470 ARG A 281 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 285 CG CD CE NZ REMARK 470 LYS A 303 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 56 -72.27 -76.40 REMARK 500 LYS A 57 39.33 -82.87 REMARK 500 LEU A 62 -70.52 -101.07 REMARK 500 ASP A 73 87.84 -157.59 REMARK 500 ILE A 135 136.87 -172.90 REMARK 500 TYR A 142 48.71 -97.38 REMARK 500 ASP A 172 32.52 -96.00 REMARK 500 TYR A 187 74.06 -118.17 REMARK 500 SER A 280 -118.58 -129.06 REMARK 500 LYS A 308 108.63 -57.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NDP A 401 DBREF 6XHK A 1 341 UNP Q2G1B9 TARJ1_STAA8 1 341 SEQRES 1 A 341 MET ILE ASN GLN VAL TYR GLN LEU VAL ALA PRO ARG GLN SEQRES 2 A 341 PHE GLU VAL THR TYR ASN ASN VAL ASP ILE TYR SER ASP SEQRES 3 A 341 TYR VAL ILE VAL ARG PRO LEU TYR MET SER ILE CME ALA SEQRES 4 A 341 ALA ASP GLN ARG TYR TYR THR GLY SER ARG ASP GLU ASN SEQRES 5 A 341 VAL LEU SER GLN LYS LEU PRO MET SER LEU ILE HIS GLU SEQRES 6 A 341 GLY VAL GLY GLU VAL VAL PHE ASP SER LYS GLY VAL PHE SEQRES 7 A 341 ASN LYS GLY THR LYS VAL VAL MET VAL PRO ASN THR PRO SEQRES 8 A 341 THR GLU LYS ASP ASP VAL ILE ALA GLU ASN TYR LEU LYS SEQRES 9 A 341 SER SER TYR PHE ARG SER SER GLY HIS ASP GLY PHE MET SEQRES 10 A 341 GLN ASP PHE VAL LEU LEU ASN HIS ASP ARG ALA VAL PRO SEQRES 11 A 341 LEU PRO ASP ASP ILE ASP LEU SER ILE ILE SER TYR THR SEQRES 12 A 341 GLU LEU VAL THR VAL SER LEU HIS ALA ILE ARG ARG PHE SEQRES 13 A 341 GLU LYS LYS SER ILE SER ASN LYS ASN THR PHE GLY ILE SEQRES 14 A 341 TRP GLY ASP GLY ASN LEU GLY TYR ILE THR ALA ILE LEU SEQRES 15 A 341 LEU ARG LYS LEU TYR PRO GLU SER LYS ILE TYR VAL PHE SEQRES 16 A 341 GLY LYS THR ASP TYR LYS LEU SER HIS PHE SER PHE VAL SEQRES 17 A 341 ASP ASP VAL PHE PHE ILE ASN LYS ILE PRO GLU GLY LEU SEQRES 18 A 341 THR PHE ASP HIS ALA PHE GLU CYS VAL GLY GLY ARG GLY SEQRES 19 A 341 SER GLN SER ALA ILE ASN GLN MET ILE ASP TYR ILE SER SEQRES 20 A 341 PRO GLU GLY SER ILE ALA LEU LEU GLY VAL SER GLU PHE SEQRES 21 A 341 PRO VAL GLU VAL ASN THR ARG LEU VAL LEU GLU LYS GLY SEQRES 22 A 341 LEU THR LEU ILE GLY SER SER ARG SER GLY SER LYS ASP SEQRES 23 A 341 PHE GLN ASP VAL VAL ASP LEU TYR ILE GLN TYR PRO ASP SEQRES 24 A 341 ILE VAL ASP LYS LEU ALA LEU LEU LYS GLY GLN GLU PHE SEQRES 25 A 341 GLU ILE ALA THR ILE ASN ASP LEU THR GLU ALA PHE GLU SEQRES 26 A 341 ALA ASP LEU SER THR SER TRP GLY LYS THR VAL LEU LYS SEQRES 27 A 341 TRP ILE MET MODRES 6XHK CME A 38 CYS MODIFIED RESIDUE HET CME A 38 10 HET NDP A 401 48 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE FORMUL 1 CME C5 H11 N O3 S2 FORMUL 2 NDP C21 H30 N7 O17 P3 HELIX 1 AA1 CME A 38 GLY A 47 1 10 HELIX 2 AA2 GLU A 51 SER A 55 1 5 HELIX 3 AA3 ASN A 124 ASP A 126 5 3 HELIX 4 AA4 ASP A 136 SER A 141 1 6 HELIX 5 AA5 TYR A 142 PHE A 156 1 15 HELIX 6 AA6 GLU A 157 ILE A 161 5 5 HELIX 7 AA7 GLY A 173 TYR A 187 1 15 HELIX 8 AA8 THR A 198 SER A 203 1 6 HELIX 9 AA9 GLY A 231 ILE A 246 1 16 HELIX 10 AB1 ASN A 265 GLY A 273 1 9 HELIX 11 AB2 GLY A 283 TYR A 297 1 15 HELIX 12 AB3 PRO A 298 LEU A 306 1 9 HELIX 13 AB4 ILE A 317 SER A 329 1 13 SHEET 1 AA1 2 ILE A 2 ALA A 10 0 SHEET 2 AA1 2 GLN A 13 ASN A 20 -1 O ASN A 19 N ASN A 3 SHEET 1 AA2 5 VAL A 121 LEU A 123 0 SHEET 2 AA2 5 VAL A 28 SER A 36 -1 N VAL A 30 O VAL A 121 SHEET 3 AA2 5 GLU A 65 ASP A 73 -1 O GLU A 69 N ARG A 31 SHEET 4 AA2 5 LYS A 83 MET A 86 -1 O VAL A 84 N GLY A 68 SHEET 5 AA2 5 ALA A 128 PRO A 130 -1 O VAL A 129 N VAL A 85 SHEET 1 AA3 4 VAL A 121 LEU A 123 0 SHEET 2 AA3 4 VAL A 28 SER A 36 -1 N VAL A 30 O VAL A 121 SHEET 3 AA3 4 LYS A 334 TRP A 339 -1 O TRP A 339 N LEU A 33 SHEET 4 AA3 4 LYS A 308 ILE A 314 1 N PHE A 312 O LYS A 338 SHEET 1 AA4 6 ASP A 210 PHE A 213 0 SHEET 2 AA4 6 LYS A 191 GLY A 196 1 N VAL A 194 O PHE A 212 SHEET 3 AA4 6 THR A 166 TRP A 170 1 N ILE A 169 O PHE A 195 SHEET 4 AA4 6 HIS A 225 GLU A 228 1 O PHE A 227 N TRP A 170 SHEET 5 AA4 6 SER A 251 LEU A 254 1 O ALA A 253 N GLU A 228 SHEET 6 AA4 6 THR A 275 GLY A 278 1 O ILE A 277 N LEU A 254 LINK C ILE A 37 N CME A 38 1555 1555 1.33 LINK C CME A 38 N ALA A 39 1555 1555 1.33 SITE 1 AC1 18 CME A 38 VAL A 148 GLY A 171 ASP A 172 SITE 2 AC1 18 GLY A 173 ASN A 174 LEU A 175 LYS A 197 SITE 3 AC1 18 LYS A 201 VAL A 230 GLY A 231 GLY A 234 SITE 4 AC1 18 SER A 237 LEU A 255 VAL A 257 SER A 279 SITE 5 AC1 18 SER A 280 ARG A 281 CRYST1 99.237 99.237 268.757 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010077 0.005818 0.000000 0.00000 SCALE2 0.000000 0.011636 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003721 0.00000