HEADER METAL BINDING PROTEIN 19-JUN-20 6XIH TITLE STRUCTURE-GUIDED OPTIMIZATION OF A NOVEL CLASS OF ASK1 INHIBITORS WITH TITLE 2 INCREASED SP3 CHARACTER AND AN EXQUISITE SELECTIVITY PROFILE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: APOPTOSIS SIGNAL-REGULATING KINASE 1,ASK-1,MAPK/ERK KINASE COMPND 5 KINASE 5,MEKK 5; COMPND 6 EC: 2.7.11.25; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAP3K5, ASK1, MAPKKK5, MEKK5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2(DE3) PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PEH8 KEYWDS TRANSFERASE, METAL-BINDING, APOPTOSIS, SERINE/THREONINE KINASE, METAL KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.R.DOUGAN REVDAT 2 18-OCT-23 6XIH 1 REMARK REVDAT 1 12-AUG-20 6XIH 0 JRNL AUTH S.V.BIGI-BOTTERILL,A.IVETAC,E.L.BRADSHAW,D.COLE,D.R.DOUGAN, JRNL AUTH 2 J.ERMOLIEFF,P.HALKOWYCZ,B.JOHNSON,C.MCBRIDE,J.PICKENS, JRNL AUTH 3 M.SABAT,S.SWANN JRNL TITL STRUCTURE-GUIDED OPTIMIZATION OF A NOVEL CLASS OF ASK1 JRNL TITL 2 INHIBITORS WITH INCREASED SP3CHARACTER AND AN EXQUISITE JRNL TITL 3 SELECTIVITY PROFILE. JRNL REF BIOORG.MED.CHEM.LETT. V. 30 27405 2020 JRNL REFN ESSN 1464-3405 JRNL PMID 32738982 JRNL DOI 10.1016/J.BMCL.2020.127405 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0257 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 22147 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.292 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2179 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1580 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.3620 REMARK 3 BIN FREE R VALUE SET COUNT : 160 REMARK 3 BIN FREE R VALUE : 0.4260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4004 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 46 REMARK 3 SOLVENT ATOMS : 45 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.37000 REMARK 3 B22 (A**2) : 1.37000 REMARK 3 B33 (A**2) : -4.44000 REMARK 3 B12 (A**2) : 0.68000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.511 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.343 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.289 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 30.663 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.896 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4147 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3851 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5586 ; 1.568 ; 1.659 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8976 ; 1.190 ; 1.582 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 498 ; 7.296 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 206 ;37.325 ;23.544 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 739 ;17.813 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;24.129 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 523 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4550 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 821 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 671 A 1000 REMARK 3 ORIGIN FOR THE GROUP (A): 10.1334 12.5680 25.5529 REMARK 3 T TENSOR REMARK 3 T11: 0.2609 T22: 0.2991 REMARK 3 T33: 0.2175 T12: -0.2503 REMARK 3 T13: 0.0783 T23: -0.0287 REMARK 3 L TENSOR REMARK 3 L11: 0.6577 L22: 0.9651 REMARK 3 L33: 2.2456 L12: 0.7619 REMARK 3 L13: 0.4684 L23: 0.3669 REMARK 3 S TENSOR REMARK 3 S11: -0.1397 S12: 0.2161 S13: -0.0840 REMARK 3 S21: -0.1158 S22: 0.2175 S23: 0.0220 REMARK 3 S31: -0.3971 S32: 0.6583 S33: -0.0778 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 671 B 1000 REMARK 3 ORIGIN FOR THE GROUP (A): 5.8645 49.8049 -0.5071 REMARK 3 T TENSOR REMARK 3 T11: 0.3825 T22: 0.2111 REMARK 3 T33: 0.1426 T12: -0.1817 REMARK 3 T13: -0.0528 T23: 0.1076 REMARK 3 L TENSOR REMARK 3 L11: 0.1133 L22: 1.1417 REMARK 3 L33: 1.9710 L12: 0.3005 REMARK 3 L13: 0.0720 L23: 0.0039 REMARK 3 S TENSOR REMARK 3 S11: 0.1011 S12: -0.0132 S13: 0.0246 REMARK 3 S21: 0.0749 S22: -0.0859 S23: -0.0870 REMARK 3 S31: 0.4646 S32: -0.4097 S33: -0.0152 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6XIH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1000250202. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9760 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24937 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.630 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.50 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 10.30 REMARK 200 R MERGE FOR SHELL (I) : 0.89800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5USQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6% POLYETHYLENE GLYCOL 2000 MME , 20% REMARK 280 GLYCEROL, 0.1M MES, PH 6.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 286.47000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 143.23500 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 214.85250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 71.61750 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 358.08750 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 286.47000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 143.23500 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 71.61750 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 214.85250 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 358.08750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 666 REMARK 465 GLU A 667 REMARK 465 SER A 668 REMARK 465 ASP A 669 REMARK 465 LEU A 670 REMARK 465 ASP A 715 REMARK 465 SER A 716 REMARK 465 ARG A 717 REMARK 465 TYR A 718 REMARK 465 ALA A 830 REMARK 465 GLY A 831 REMARK 465 ILE A 832 REMARK 465 ASN A 833 REMARK 465 PRO A 834 REMARK 465 CYS A 835 REMARK 465 THR A 836 REMARK 465 GLU A 837 REMARK 465 SER A 941 REMARK 465 SER A 942 REMARK 465 LYS A 943 REMARK 465 LYS A 944 REMARK 465 LYS A 945 REMARK 465 LYS A 946 REMARK 465 THR A 947 REMARK 465 GLN A 948 REMARK 465 PRO A 949 REMARK 465 LYS A 950 REMARK 465 LEU A 951 REMARK 465 SER A 952 REMARK 465 ALA A 953 REMARK 465 SER A 954 REMARK 465 HIS A 955 REMARK 465 HIS A 956 REMARK 465 HIS A 957 REMARK 465 HIS A 958 REMARK 465 HIS A 959 REMARK 465 HIS A 960 REMARK 465 MET B 666 REMARK 465 GLU B 667 REMARK 465 SER B 668 REMARK 465 ASP B 669 REMARK 465 LEU B 670 REMARK 465 SER B 716 REMARK 465 ARG B 717 REMARK 465 TYR B 718 REMARK 465 SER B 719 REMARK 465 GLN B 720 REMARK 465 LEU B 829 REMARK 465 ALA B 830 REMARK 465 GLY B 831 REMARK 465 ILE B 832 REMARK 465 ASN B 833 REMARK 465 PRO B 834 REMARK 465 CYS B 835 REMARK 465 THR B 836 REMARK 465 GLU B 837 REMARK 465 THR B 838 REMARK 465 PHE B 839 REMARK 465 THR B 840 REMARK 465 LYS B 853 REMARK 465 GLY B 854 REMARK 465 PRO B 855 REMARK 465 ARG B 856 REMARK 465 GLY B 857 REMARK 465 LEU B 884 REMARK 465 VAL B 940 REMARK 465 SER B 941 REMARK 465 SER B 942 REMARK 465 LYS B 943 REMARK 465 LYS B 944 REMARK 465 LYS B 945 REMARK 465 LYS B 946 REMARK 465 THR B 947 REMARK 465 GLN B 948 REMARK 465 PRO B 949 REMARK 465 LYS B 950 REMARK 465 LEU B 951 REMARK 465 SER B 952 REMARK 465 ALA B 953 REMARK 465 SER B 954 REMARK 465 HIS B 955 REMARK 465 HIS B 956 REMARK 465 HIS B 957 REMARK 465 HIS B 958 REMARK 465 HIS B 959 REMARK 465 HIS B 960 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 702 -1.05 -154.92 REMARK 500 ASN A 747 36.95 37.28 REMARK 500 LYS A 769 -52.38 -125.10 REMARK 500 GLN A 798 45.14 72.14 REMARK 500 ASP A 803 43.35 -154.24 REMARK 500 ASP A 822 90.11 62.39 REMARK 500 GLU A 920 106.14 -43.67 REMARK 500 TYR B 691 -80.35 -103.93 REMARK 500 ASN B 747 31.26 39.33 REMARK 500 LYS B 769 -39.86 -143.20 REMARK 500 ARG B 802 -13.44 86.87 REMARK 500 ASP B 822 96.79 66.06 REMARK 500 PRO B 879 155.28 -47.68 REMARK 500 ASP B 935 151.11 -46.05 REMARK 500 LEU B 938 35.00 -92.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue V3S A 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue V3S B 1000 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5UP3 RELATED DB: PDB DBREF 6XIH A 667 953 UNP Q99683 M3K5_HUMAN 667 953 DBREF 6XIH B 667 953 UNP Q99683 M3K5_HUMAN 667 953 SEQADV 6XIH MET A 666 UNP Q99683 INITIATING METHIONINE SEQADV 6XIH SER A 954 UNP Q99683 EXPRESSION TAG SEQADV 6XIH HIS A 955 UNP Q99683 EXPRESSION TAG SEQADV 6XIH HIS A 956 UNP Q99683 EXPRESSION TAG SEQADV 6XIH HIS A 957 UNP Q99683 EXPRESSION TAG SEQADV 6XIH HIS A 958 UNP Q99683 EXPRESSION TAG SEQADV 6XIH HIS A 959 UNP Q99683 EXPRESSION TAG SEQADV 6XIH HIS A 960 UNP Q99683 EXPRESSION TAG SEQADV 6XIH MET B 666 UNP Q99683 INITIATING METHIONINE SEQADV 6XIH SER B 954 UNP Q99683 EXPRESSION TAG SEQADV 6XIH HIS B 955 UNP Q99683 EXPRESSION TAG SEQADV 6XIH HIS B 956 UNP Q99683 EXPRESSION TAG SEQADV 6XIH HIS B 957 UNP Q99683 EXPRESSION TAG SEQADV 6XIH HIS B 958 UNP Q99683 EXPRESSION TAG SEQADV 6XIH HIS B 959 UNP Q99683 EXPRESSION TAG SEQADV 6XIH HIS B 960 UNP Q99683 EXPRESSION TAG SEQRES 1 A 295 MET GLU SER ASP LEU LEU GLU TYR ASP TYR GLU TYR ASP SEQRES 2 A 295 GLU ASN GLY ASP ARG VAL VAL LEU GLY LYS GLY THR TYR SEQRES 3 A 295 GLY ILE VAL TYR ALA GLY ARG ASP LEU SER ASN GLN VAL SEQRES 4 A 295 ARG ILE ALA ILE LYS GLU ILE PRO GLU ARG ASP SER ARG SEQRES 5 A 295 TYR SER GLN PRO LEU HIS GLU GLU ILE ALA LEU HIS LYS SEQRES 6 A 295 HIS LEU LYS HIS LYS ASN ILE VAL GLN TYR LEU GLY SER SEQRES 7 A 295 PHE SER GLU ASN GLY PHE ILE LYS ILE PHE MET GLU GLN SEQRES 8 A 295 VAL PRO GLY GLY SER LEU SER ALA LEU LEU ARG SER LYS SEQRES 9 A 295 TRP GLY PRO LEU LYS ASP ASN GLU GLN THR ILE GLY PHE SEQRES 10 A 295 TYR THR LYS GLN ILE LEU GLU GLY LEU LYS TYR LEU HIS SEQRES 11 A 295 ASP ASN GLN ILE VAL HIS ARG ASP ILE LYS GLY ASP ASN SEQRES 12 A 295 VAL LEU ILE ASN THR TYR SER GLY VAL LEU LYS ILE SER SEQRES 13 A 295 ASP PHE GLY THR SER LYS ARG LEU ALA GLY ILE ASN PRO SEQRES 14 A 295 CYS THR GLU THR PHE THR GLY THR LEU GLN TYR MET ALA SEQRES 15 A 295 PRO GLU ILE ILE ASP LYS GLY PRO ARG GLY TYR GLY LYS SEQRES 16 A 295 ALA ALA ASP ILE TRP SER LEU GLY CYS THR ILE ILE GLU SEQRES 17 A 295 MET ALA THR GLY LYS PRO PRO PHE TYR GLU LEU GLY GLU SEQRES 18 A 295 PRO GLN ALA ALA MET PHE LYS VAL GLY MET PHE LYS VAL SEQRES 19 A 295 HIS PRO GLU ILE PRO GLU SER MET SER ALA GLU ALA LYS SEQRES 20 A 295 ALA PHE ILE LEU LYS CYS PHE GLU PRO ASP PRO ASP LYS SEQRES 21 A 295 ARG ALA CYS ALA ASN ASP LEU LEU VAL ASP GLU PHE LEU SEQRES 22 A 295 LYS VAL SER SER LYS LYS LYS LYS THR GLN PRO LYS LEU SEQRES 23 A 295 SER ALA SER HIS HIS HIS HIS HIS HIS SEQRES 1 B 295 MET GLU SER ASP LEU LEU GLU TYR ASP TYR GLU TYR ASP SEQRES 2 B 295 GLU ASN GLY ASP ARG VAL VAL LEU GLY LYS GLY THR TYR SEQRES 3 B 295 GLY ILE VAL TYR ALA GLY ARG ASP LEU SER ASN GLN VAL SEQRES 4 B 295 ARG ILE ALA ILE LYS GLU ILE PRO GLU ARG ASP SER ARG SEQRES 5 B 295 TYR SER GLN PRO LEU HIS GLU GLU ILE ALA LEU HIS LYS SEQRES 6 B 295 HIS LEU LYS HIS LYS ASN ILE VAL GLN TYR LEU GLY SER SEQRES 7 B 295 PHE SER GLU ASN GLY PHE ILE LYS ILE PHE MET GLU GLN SEQRES 8 B 295 VAL PRO GLY GLY SER LEU SER ALA LEU LEU ARG SER LYS SEQRES 9 B 295 TRP GLY PRO LEU LYS ASP ASN GLU GLN THR ILE GLY PHE SEQRES 10 B 295 TYR THR LYS GLN ILE LEU GLU GLY LEU LYS TYR LEU HIS SEQRES 11 B 295 ASP ASN GLN ILE VAL HIS ARG ASP ILE LYS GLY ASP ASN SEQRES 12 B 295 VAL LEU ILE ASN THR TYR SER GLY VAL LEU LYS ILE SER SEQRES 13 B 295 ASP PHE GLY THR SER LYS ARG LEU ALA GLY ILE ASN PRO SEQRES 14 B 295 CYS THR GLU THR PHE THR GLY THR LEU GLN TYR MET ALA SEQRES 15 B 295 PRO GLU ILE ILE ASP LYS GLY PRO ARG GLY TYR GLY LYS SEQRES 16 B 295 ALA ALA ASP ILE TRP SER LEU GLY CYS THR ILE ILE GLU SEQRES 17 B 295 MET ALA THR GLY LYS PRO PRO PHE TYR GLU LEU GLY GLU SEQRES 18 B 295 PRO GLN ALA ALA MET PHE LYS VAL GLY MET PHE LYS VAL SEQRES 19 B 295 HIS PRO GLU ILE PRO GLU SER MET SER ALA GLU ALA LYS SEQRES 20 B 295 ALA PHE ILE LEU LYS CYS PHE GLU PRO ASP PRO ASP LYS SEQRES 21 B 295 ARG ALA CYS ALA ASN ASP LEU LEU VAL ASP GLU PHE LEU SEQRES 22 B 295 LYS VAL SER SER LYS LYS LYS LYS THR GLN PRO LYS LEU SEQRES 23 B 295 SER ALA SER HIS HIS HIS HIS HIS HIS HET V3S A1000 23 HET V3S B1000 23 HETNAM V3S (2R)-N-{6-[4-(PROPAN-2-YL)-4H-1,2,4-TRIAZOL-3- HETNAM 2 V3S YL]PYRIDIN-2-YL}OXANE-2-CARBOXAMIDE FORMUL 3 V3S 2(C16 H21 N5 O2) FORMUL 5 HOH *45(H2 O) HELIX 1 AA1 GLN A 720 LYS A 730 1 11 HELIX 2 AA2 LEU A 762 LYS A 769 1 8 HELIX 3 AA3 ASN A 776 ASN A 797 1 22 HELIX 4 AA4 LYS A 805 ASP A 807 5 3 HELIX 5 AA5 THR A 842 MET A 846 5 5 HELIX 6 AA6 ALA A 847 GLY A 854 1 8 HELIX 7 AA7 PRO A 855 GLY A 859 5 5 HELIX 8 AA8 LYS A 860 GLY A 877 1 18 HELIX 9 AA9 PHE A 881 GLY A 885 5 5 HELIX 10 AB1 GLU A 886 LYS A 898 1 13 HELIX 11 AB2 SER A 908 PHE A 919 1 12 HELIX 12 AB3 CYS A 928 VAL A 934 1 7 HELIX 13 AB4 ASP A 935 LYS A 939 5 5 HELIX 14 AB5 LEU B 722 LYS B 730 1 9 HELIX 15 AB6 LEU B 762 LYS B 769 1 8 HELIX 16 AB7 ASN B 776 ASP B 796 1 21 HELIX 17 AB8 THR B 842 MET B 846 5 5 HELIX 18 AB9 PRO B 848 ASP B 852 5 5 HELIX 19 AC1 GLY B 859 GLY B 877 1 19 HELIX 20 AC2 ALA B 890 LYS B 898 1 9 HELIX 21 AC3 SER B 908 CYS B 918 1 11 HELIX 22 AC4 CYS B 928 ASP B 935 1 8 HELIX 23 AC5 GLU B 936 LYS B 939 5 4 SHEET 1 AA1 3 TYR A 673 TYR A 675 0 SHEET 2 AA1 3 GLY A 692 ASP A 699 -1 O ARG A 698 N ASP A 674 SHEET 3 AA1 3 VAL A 685 GLY A 689 -1 N GLY A 689 O GLY A 692 SHEET 1 AA2 5 TYR A 673 TYR A 675 0 SHEET 2 AA2 5 GLY A 692 ASP A 699 -1 O ARG A 698 N ASP A 674 SHEET 3 AA2 5 ARG A 705 PRO A 712 -1 O ILE A 708 N TYR A 695 SHEET 4 AA2 5 PHE A 749 GLU A 755 -1 O MET A 754 N ALA A 707 SHEET 5 AA2 5 TYR A 740 GLU A 746 -1 N GLY A 742 O PHE A 753 SHEET 1 AA3 3 GLY A 759 SER A 761 0 SHEET 2 AA3 3 VAL A 809 ASN A 812 -1 O ILE A 811 N GLY A 760 SHEET 3 AA3 3 LEU A 818 ILE A 820 -1 O LYS A 819 N LEU A 810 SHEET 1 AA4 2 ILE A 799 VAL A 800 0 SHEET 2 AA4 2 LYS A 827 ARG A 828 -1 O LYS A 827 N VAL A 800 SHEET 1 AA5 3 TYR B 673 TYR B 675 0 SHEET 2 AA5 3 ILE B 693 ASP B 699 -1 O ARG B 698 N ASP B 674 SHEET 3 AA5 3 VAL B 685 LYS B 688 -1 N LEU B 686 O VAL B 694 SHEET 1 AA6 5 TYR B 673 TYR B 675 0 SHEET 2 AA6 5 ILE B 693 ASP B 699 -1 O ARG B 698 N ASP B 674 SHEET 3 AA6 5 ARG B 705 PRO B 712 -1 O ILE B 708 N TYR B 695 SHEET 4 AA6 5 PHE B 749 GLU B 755 -1 O ILE B 752 N LYS B 709 SHEET 5 AA6 5 TYR B 740 GLU B 746 -1 N GLY B 742 O PHE B 753 SHEET 1 AA7 3 GLY B 759 SER B 761 0 SHEET 2 AA7 3 VAL B 809 ASN B 812 -1 O ILE B 811 N GLY B 760 SHEET 3 AA7 3 LEU B 818 ILE B 820 -1 O LYS B 819 N LEU B 810 SITE 1 AC1 14 LEU A 686 VAL A 694 ALA A 707 LYS A 709 SITE 2 AC1 14 VAL A 738 MET A 754 GLU A 755 GLN A 756 SITE 3 AC1 14 VAL A 757 GLY A 759 ASP A 807 LEU A 810 SITE 4 AC1 14 SER A 821 ASP A 822 SITE 1 AC2 16 LEU B 686 LYS B 688 GLY B 689 VAL B 694 SITE 2 AC2 16 ALA B 707 LYS B 709 VAL B 738 MET B 754 SITE 3 AC2 16 GLU B 755 GLN B 756 VAL B 757 GLY B 760 SITE 4 AC2 16 ASP B 807 LEU B 810 SER B 821 HOH B1107 CRYST1 78.910 78.910 429.705 90.00 90.00 120.00 P 65 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012673 0.007317 0.000000 0.00000 SCALE2 0.000000 0.014633 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002327 0.00000