HEADER DE NOVO PROTEIN 23-JAN-20 6XWI TITLE SOLUTION NMR STRUCTURE OF THE S0_2.126 DESIGNED PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: S0_2.126; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DESIGNED PROTEIN, DE NOVO PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR L.A.ABRIATA REVDAT 4 14-JUN-23 6XWI 1 REMARK REVDAT 3 27-MAY-20 6XWI 1 JRNL REVDAT 2 06-MAY-20 6XWI 1 JRNL REVDAT 1 15-APR-20 6XWI 0 JRNL AUTH F.SESTERHENN,C.YANG,J.BONET,J.T.CRAMER,X.WEN,Y.WANG, JRNL AUTH 2 C.I.CHIANG,L.A.ABRIATA,I.KUCHARSKA,G.CASTORO,S.S.VOLLERS, JRNL AUTH 3 M.GALLOUX,E.DHEILLY,S.ROSSET,P.CORTHESY,S.GEORGEON, JRNL AUTH 4 M.VILLARD,C.A.RICHARD,D.DESCAMPS,T.DELGADO,E.ORICCHIO, JRNL AUTH 5 M.A.RAMEIX-WELTI,V.MAS,S.ERVIN,J.F.ELEOUET,S.RIFFAULT, JRNL AUTH 6 J.T.BATES,J.P.JULIEN,Y.LI,T.JARDETZKY,T.KREY,B.E.CORREIA JRNL TITL DE NOVO PROTEIN DESIGN ENABLES THE PRECISE INDUCTION OF JRNL TITL 2 RSV-NEUTRALIZING ANTIBODIES. JRNL REF SCIENCE V. 368 2020 JRNL REFN ESSN 1095-9203 JRNL PMID 32409444 JRNL DOI 10.1126/SCIENCE.AAY5051 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6XWI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1292106273. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 20 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 500 UM PROTEIN 3HB_126543, 20 MM REMARK 210 SODIUM PHOSPHATE, 90% H2O/10% REMARK 210 D2O; 500 UM [U-99% 15N] PROTEIN REMARK 210 3HB_126543, 20 MM SODIUM REMARK 210 PHOSPHATE, 90% H2O/10% D2O; 400 REMARK 210 UM [U-99% 13C; U-99% 15N] REMARK 210 PROTEIN 3HB_126543, 20 MM SODIUM REMARK 210 PHOSPHATE, 90% H2O/10% D2O; 500 REMARK 210 UM PROTEIN 3HB_126543, 20 MM REMARK 210 SODIUM PHOSPHATE, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCO; 3D HNCA; 3D CBCA(CO)NH; REMARK 210 3D HNCACB; 3D HN(CO)CA; 3D HN(CA) REMARK 210 CO; 2D 1H-15N HSQC; 3D 1H-15N REMARK 210 NOESY; 3D 1H-15N TOCSY; 3D HNHA; REMARK 210 3D HCCH-TOCSY; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-1H NOESY; 2D 1H- REMARK 210 1H TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE II REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CARA, UNIO, TOPSPIN REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 HIS A 67 REMARK 465 HIS A 68 REMARK 465 HIS A 69 REMARK 465 HIS A 70 REMARK 465 HIS A 71 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 CYS A 24 92.20 168.54 REMARK 500 1 SER A 25 -166.03 -79.49 REMARK 500 1 LEU A 54 35.74 -77.79 REMARK 500 1 GLU A 56 59.20 -111.17 REMARK 500 1 LEU A 64 39.91 -174.40 REMARK 500 2 CYS A 24 92.49 168.60 REMARK 500 2 SER A 25 -165.01 -78.59 REMARK 500 2 LEU A 54 35.97 -77.76 REMARK 500 2 GLU A 56 59.60 -111.08 REMARK 500 2 CYS A 59 106.17 -45.71 REMARK 500 2 TRP A 63 -179.71 -171.77 REMARK 500 3 CYS A 24 91.32 168.59 REMARK 500 3 LEU A 54 35.59 -78.53 REMARK 500 3 GLU A 56 59.07 -112.46 REMARK 500 3 LYS A 58 51.42 -117.57 REMARK 500 4 CYS A 24 91.67 168.74 REMARK 500 4 SER A 25 -164.92 -79.34 REMARK 500 4 LEU A 54 37.15 -77.98 REMARK 500 4 GLU A 56 59.31 -111.09 REMARK 500 4 CYS A 59 105.24 -48.01 REMARK 500 4 GLU A 65 -169.93 -119.09 REMARK 500 5 CYS A 24 91.39 168.67 REMARK 500 5 LEU A 54 36.65 -78.47 REMARK 500 5 GLU A 56 58.18 -113.61 REMARK 500 5 LYS A 58 50.81 -119.63 REMARK 500 5 LEU A 64 90.60 -160.87 REMARK 500 6 CYS A 4 36.09 -150.86 REMARK 500 6 CYS A 24 92.54 168.08 REMARK 500 6 LEU A 54 36.82 -79.80 REMARK 500 6 GLU A 56 58.25 -111.94 REMARK 500 6 LEU A 64 90.01 -178.33 REMARK 500 7 CYS A 24 95.81 168.44 REMARK 500 7 SER A 25 -166.05 -78.32 REMARK 500 7 LEU A 54 36.32 -78.15 REMARK 500 7 GLU A 56 57.79 -112.28 REMARK 500 7 SER A 62 121.19 -179.46 REMARK 500 8 CYS A 24 94.06 168.37 REMARK 500 8 SER A 25 -165.99 -78.33 REMARK 500 8 LEU A 54 37.48 -78.50 REMARK 500 8 GLU A 56 58.02 -112.42 REMARK 500 8 SER A 62 124.10 -179.75 REMARK 500 9 CYS A 24 97.57 168.39 REMARK 500 9 SER A 25 -166.26 -78.01 REMARK 500 9 LEU A 54 36.75 -77.64 REMARK 500 9 GLU A 56 58.60 -111.50 REMARK 500 9 LEU A 64 40.24 -99.96 REMARK 500 10 CYS A 24 96.57 168.36 REMARK 500 10 SER A 25 -166.26 -77.72 REMARK 500 10 LEU A 54 36.29 -77.59 REMARK 500 10 GLU A 56 58.11 -112.34 REMARK 500 REMARK 500 THIS ENTRY HAS 101 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34481 RELATED DB: BMRB REMARK 900 SOLUTION NMR STRUCTURE OF THE S0_2.126 DESIGNED PROTEIN DBREF 6XWI A 1 71 PDB 6XWI 6XWI 1 71 SEQRES 1 A 71 ALA SER PRO CYS ASP LYS GLN LYS ASN TYR ILE ASP LYS SEQRES 2 A 71 GLN LEU LEU PRO ILE VAL ASN LYS ALA GLY CYS SER ARG SEQRES 3 A 71 PRO GLU GLU VAL GLU GLU ARG ILE ARG ARG ALA LEU LYS SEQRES 4 A 71 LYS MET GLY ASP THR SER CYS PHE ASP GLU ILE LEU LYS SEQRES 5 A 71 GLY LEU LYS GLU ILE LYS CYS GLY GLY SER TRP LEU GLU SEQRES 6 A 71 HIS HIS HIS HIS HIS HIS HELIX 1 AA1 CYS A 4 GLY A 23 1 20 HELIX 2 AA2 ARG A 26 LYS A 39 1 14 HELIX 3 AA3 ASP A 43 LEU A 54 1 12 SSBOND 1 CYS A 4 CYS A 46 1555 1555 2.11 SSBOND 2 CYS A 24 CYS A 59 1555 1555 1.86 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1