HEADER ANTITUMOR PROTEIN 28-JAN-20 6XXO TITLE CRYSTAL STRUCTURE OF NB8, A NANOBODY TARGETING PROSTATE SPECIFIC TITLE 2 MEMBRANE ANTIGEN COMPND MOL_ID: 1; COMPND 2 MOLECULE: NB_8; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAMELUS DROMEDARIUS; SOURCE 3 ORGANISM_COMMON: ARABIAN CAMEL; SOURCE 4 ORGANISM_TAXID: 9838; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NANOBODY, PROSTATE-SPECIFIC MEMBRANE ANTIGEN, ANTIBODY DRUG KEYWDS 2 CONJUGATE, CANCER IMAGING, ANTI-CANCER DRUGS., ANTITUMOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.SHAHAR,L.ROSENFELD,N.PAPO REVDAT 3 24-JAN-24 6XXO 1 REMARK REVDAT 2 05-AUG-20 6XXO 1 JRNL REVDAT 1 10-JUN-20 6XXO 0 JRNL AUTH L.ROSENFELD,A.SANANES,Y.ZUR,S.COHEN,K.DHARA,S.GELKOP, JRNL AUTH 2 E.BEN ZEEV,A.SHAHAR,L.LOBEL,B.AKABAYOV,E.ARBELY,N.PAPO JRNL TITL NANOBODIES TARGETING PROSTATE-SPECIFIC MEMBRANE ANTIGEN FOR JRNL TITL 2 THE IMAGING AND THERAPY OF PROSTATE CANCER. JRNL REF J.MED.CHEM. V. 63 7601 2020 JRNL REFN ISSN 0022-2623 JRNL PMID 32442375 JRNL DOI 10.1021/ACS.JMEDCHEM.0C00418 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 23276 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.760 REMARK 3 FREE R VALUE TEST SET COUNT : 1107 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 3.1800 - 2.9998 0.96 2858 148 0.1585 0.1696 REMARK 3 2 2.9998 - 2.3814 0.97 2743 147 0.1797 0.1912 REMARK 3 3 2.3814 - 2.0805 0.96 2701 143 0.1575 0.1787 REMARK 3 4 2.0805 - 1.8903 0.99 2777 125 0.1556 0.2029 REMARK 3 5 1.8903 - 1.7548 0.99 2789 134 0.1545 0.2030 REMARK 3 6 1.7548 - 1.6514 0.99 2760 145 0.1590 0.1788 REMARK 3 7 1.6514 - 1.5687 0.99 2787 134 0.0000 0.0000 REMARK 3 8 1.5687 - 1.5004 0.99 2754 131 0.1686 0.2130 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.650 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1103 REMARK 3 ANGLE : 0.943 1525 REMARK 3 CHIRALITY : 0.060 164 REMARK 3 PLANARITY : 0.006 201 REMARK 3 DIHEDRAL : 2.761 1040 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 7 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.2741 -17.5655 5.7964 REMARK 3 T TENSOR REMARK 3 T11: 0.1297 T22: 0.1411 REMARK 3 T33: 0.1647 T12: -0.0649 REMARK 3 T13: -0.0166 T23: -0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.5140 L22: 4.4905 REMARK 3 L33: 2.4667 L12: -0.7042 REMARK 3 L13: 0.4234 L23: 2.9277 REMARK 3 S TENSOR REMARK 3 S11: 0.0775 S12: 0.0910 S13: 0.1651 REMARK 3 S21: -0.1501 S22: 0.1377 S23: -0.4453 REMARK 3 S31: -0.3185 S32: 0.4703 S33: -0.3076 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 8 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.0582 -27.6585 -14.7663 REMARK 3 T TENSOR REMARK 3 T11: 0.1157 T22: 0.1241 REMARK 3 T33: 0.0854 T12: 0.0037 REMARK 3 T13: 0.0232 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 2.9972 L22: 3.8956 REMARK 3 L33: 4.3839 L12: 2.2230 REMARK 3 L13: 0.6332 L23: 1.8046 REMARK 3 S TENSOR REMARK 3 S11: -0.2403 S12: 0.1768 S13: 0.0244 REMARK 3 S21: -0.3576 S22: 0.1943 S23: -0.0540 REMARK 3 S31: -0.0072 S32: 0.3008 S33: -0.0114 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.7800 -25.3068 1.8468 REMARK 3 T TENSOR REMARK 3 T11: 0.0544 T22: 0.0597 REMARK 3 T33: 0.0623 T12: -0.0091 REMARK 3 T13: -0.0039 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 1.9639 L22: 6.4144 REMARK 3 L33: 3.7524 L12: 0.0693 REMARK 3 L13: -0.2487 L23: 4.5358 REMARK 3 S TENSOR REMARK 3 S11: 0.0469 S12: -0.1407 S13: -0.0256 REMARK 3 S21: 0.0757 S22: -0.1002 S23: -0.0728 REMARK 3 S31: 0.0213 S32: -0.0474 S33: 0.0703 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.3294 -19.2088 5.5980 REMARK 3 T TENSOR REMARK 3 T11: 0.0875 T22: 0.0705 REMARK 3 T33: 0.0759 T12: -0.0225 REMARK 3 T13: 0.0032 T23: -0.0152 REMARK 3 L TENSOR REMARK 3 L11: 0.8420 L22: 1.2699 REMARK 3 L33: 2.6676 L12: -0.6876 REMARK 3 L13: 0.4164 L23: 0.4151 REMARK 3 S TENSOR REMARK 3 S11: 0.0316 S12: -0.0244 S13: 0.0958 REMARK 3 S21: 0.0435 S22: 0.0321 S23: -0.1048 REMARK 3 S31: -0.0695 S32: 0.1023 S33: -0.0446 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.7375 -17.2257 -6.3264 REMARK 3 T TENSOR REMARK 3 T11: 0.1892 T22: 0.1128 REMARK 3 T33: 0.1290 T12: 0.0413 REMARK 3 T13: 0.0659 T23: 0.0485 REMARK 3 L TENSOR REMARK 3 L11: 1.0849 L22: 1.7785 REMARK 3 L33: 1.8235 L12: 0.9286 REMARK 3 L13: -1.3096 L23: -1.6021 REMARK 3 S TENSOR REMARK 3 S11: 0.2124 S12: 0.2809 S13: 0.3561 REMARK 3 S21: -0.0125 S22: 0.1436 S23: 0.0608 REMARK 3 S31: -0.3949 S32: -0.2668 S33: 0.3251 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 53 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.9022 -28.1621 -2.1092 REMARK 3 T TENSOR REMARK 3 T11: 0.1979 T22: 0.1569 REMARK 3 T33: 0.1356 T12: -0.0137 REMARK 3 T13: -0.0203 T23: -0.0199 REMARK 3 L TENSOR REMARK 3 L11: 3.5005 L22: 2.8125 REMARK 3 L33: 0.4664 L12: 0.2487 REMARK 3 L13: 0.7037 L23: 1.0024 REMARK 3 S TENSOR REMARK 3 S11: 0.1518 S12: 0.3361 S13: -0.2162 REMARK 3 S21: -0.2882 S22: -0.0035 S23: 0.1173 REMARK 3 S31: 0.5986 S32: -0.1094 S33: 0.1232 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.9848 -29.2970 2.3171 REMARK 3 T TENSOR REMARK 3 T11: 0.0412 T22: 0.0162 REMARK 3 T33: 0.0441 T12: 0.0003 REMARK 3 T13: -0.0087 T23: 0.0068 REMARK 3 L TENSOR REMARK 3 L11: 1.7637 L22: 2.1281 REMARK 3 L33: 3.4476 L12: 0.0666 REMARK 3 L13: -0.1187 L23: 0.2650 REMARK 3 S TENSOR REMARK 3 S11: -0.0063 S12: 0.0411 S13: 0.0392 REMARK 3 S21: 0.0055 S22: -0.0449 S23: -0.0869 REMARK 3 S31: -0.0627 S32: 0.0489 S33: 0.0553 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.9020 -22.1693 -8.6655 REMARK 3 T TENSOR REMARK 3 T11: 0.0825 T22: 0.0675 REMARK 3 T33: 0.0688 T12: -0.0008 REMARK 3 T13: 0.0041 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 0.5306 L22: 0.5519 REMARK 3 L33: 3.9683 L12: -0.1670 REMARK 3 L13: -1.0750 L23: 0.4047 REMARK 3 S TENSOR REMARK 3 S11: 0.0800 S12: 0.0066 S13: 0.0657 REMARK 3 S21: -0.1079 S22: 0.0230 S23: -0.0633 REMARK 3 S31: -0.1971 S32: -0.0226 S33: -0.0509 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.9884 -19.3947 8.6325 REMARK 3 T TENSOR REMARK 3 T11: 0.0561 T22: 0.1079 REMARK 3 T33: 0.0706 T12: 0.0156 REMARK 3 T13: 0.0047 T23: -0.0265 REMARK 3 L TENSOR REMARK 3 L11: 2.6980 L22: 3.3820 REMARK 3 L33: 6.8846 L12: 0.7861 REMARK 3 L13: 1.1713 L23: -0.2094 REMARK 3 S TENSOR REMARK 3 S11: 0.0382 S12: -0.2012 S13: 0.1665 REMARK 3 S21: 0.2569 S22: -0.0253 S23: 0.1339 REMARK 3 S31: 0.1130 S32: -0.3340 S33: -0.0264 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.1354 -17.2478 -6.1592 REMARK 3 T TENSOR REMARK 3 T11: 0.0994 T22: 0.0283 REMARK 3 T33: 0.0755 T12: -0.0336 REMARK 3 T13: 0.0017 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 1.7292 L22: 0.9857 REMARK 3 L33: 3.8592 L12: -0.4442 REMARK 3 L13: -0.7311 L23: 0.3045 REMARK 3 S TENSOR REMARK 3 S11: -0.0551 S12: -0.0562 S13: 0.1414 REMARK 3 S21: -0.0731 S22: 0.0464 S23: 0.0491 REMARK 3 S31: -0.1374 S32: 0.2325 S33: 0.0632 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6XXO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1292106504. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9677 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23283 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 28.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.02780 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.3700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5M7Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRI-NA CITRATE PH 3.5, 3M NACL, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 27.97250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.42850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 37.82350 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 27.97250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.42850 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 37.82350 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 27.97250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 34.42850 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 37.82350 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 27.97250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 34.42850 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 37.82350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 365 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 128 REMARK 465 PRO A 129 REMARK 465 TYR A 130 REMARK 465 ASP A 131 REMARK 465 VAL A 132 REMARK 465 PRO A 133 REMARK 465 ASP A 134 REMARK 465 TYR A 135 REMARK 465 GLY A 136 REMARK 465 SER A 137 REMARK 465 HIS A 138 REMARK 465 HIS A 139 REMARK 465 HIS A 140 REMARK 465 HIS A 141 REMARK 465 HIS A 142 REMARK 465 HIS A 143 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 214 O HOH A 225 1.94 REMARK 500 O HOH A 325 O HOH A 348 2.04 REMARK 500 O HOH A 201 O HOH A 306 2.11 REMARK 500 O HOH A 201 O HOH A 329 2.14 REMARK 500 OG SER A 124 O HOH A 201 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 214 O HOH A 272 4545 2.01 REMARK 500 O HOH A 289 O HOH A 323 4545 2.05 REMARK 500 O HOH A 261 O HOH A 289 4545 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 63 -105.72 -166.48 REMARK 500 REMARK 500 REMARK: NULL DBREF 6XXO A 1 143 PDB 6XXO 6XXO 1 143 SEQRES 1 A 143 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY SER VAL GLN SEQRES 2 A 143 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ARG SER GLY SEQRES 3 A 143 TRP PRO TYR SER THR TYR SER MET ASN TRP PHE ARG GLN SEQRES 4 A 143 ALA PRO GLY LYS GLU ARG GLU ALA VAL ALA GLY ILE SER SEQRES 5 A 143 SER THR MET SER GLY ILE ILE PHE ALA GLU SER LYS ALA SEQRES 6 A 143 GLY GLN PHE THR ILE SER GLN ASP ASN ALA LYS ASN THR SEQRES 7 A 143 VAL TYR LEU GLN MET ASN ASN LEU LYS PRO GLU ASP THR SEQRES 8 A 143 ALA ILE TYR TYR CYS ALA ALA ARG ARG ASP TYR SER LEU SEQRES 9 A 143 SER SER SER SER ASP ASP PHE ASP TYR TRP GLY GLN GLY SEQRES 10 A 143 THR GLN VAL THR VAL SER SER ALA ALA ALA TYR PRO TYR SEQRES 11 A 143 ASP VAL PRO ASP TYR GLY SER HIS HIS HIS HIS HIS HIS FORMUL 2 HOH *167(H2 O) HELIX 1 AA1 LYS A 87 THR A 91 5 5 HELIX 2 AA2 SER A 107 PHE A 111 5 5 SHEET 1 AA1 4 GLN A 3 SER A 7 0 SHEET 2 AA1 4 LEU A 18 SER A 25 -1 O ALA A 23 N GLN A 5 SHEET 3 AA1 4 THR A 78 MET A 83 -1 O MET A 83 N LEU A 18 SHEET 4 AA1 4 PHE A 68 ASP A 73 -1 N THR A 69 O GLN A 82 SHEET 1 AA2 6 GLY A 10 VAL A 12 0 SHEET 2 AA2 6 THR A 118 VAL A 122 1 O THR A 121 N VAL A 12 SHEET 3 AA2 6 ALA A 92 ARG A 99 -1 N TYR A 94 O THR A 118 SHEET 4 AA2 6 SER A 33 GLN A 39 -1 N PHE A 37 O TYR A 95 SHEET 5 AA2 6 GLU A 46 SER A 52 -1 O VAL A 48 N TRP A 36 SHEET 6 AA2 6 ILE A 58 ILE A 59 -1 O ILE A 58 N GLY A 50 SHEET 1 AA3 4 GLY A 10 VAL A 12 0 SHEET 2 AA3 4 THR A 118 VAL A 122 1 O THR A 121 N VAL A 12 SHEET 3 AA3 4 ALA A 92 ARG A 99 -1 N TYR A 94 O THR A 118 SHEET 4 AA3 4 TYR A 113 TRP A 114 -1 O TYR A 113 N ALA A 98 SSBOND 1 CYS A 22 CYS A 96 1555 1555 2.02 CISPEP 1 ALA A 65 GLY A 66 0 2.95 CRYST1 55.945 68.857 75.647 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017875 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014523 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013219 0.00000