HEADER IMMUNE SYSTEM 29-JAN-20 6XY2 TITLE CRYSTAL STRUCTURE OF CTLA-4 COMPLEXED WITH THE FAB OF HL32 ANTIBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOTOXIC T-LYMPHOCYTE PROTEIN 4; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYTOTOXIC T-LYMPHOCYTE-ASSOCIATED ANTIGEN 4,CTLA-4; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HEAVY CHAIN; COMPND 8 CHAIN: H; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: LIGHT CHAIN; COMPND 12 CHAIN: L; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CTLA4, CD152; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 17 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 18 MOL_ID: 3; SOURCE 19 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 20 ORGANISM_COMMON: HUMAN; SOURCE 21 ORGANISM_TAXID: 9606; SOURCE 22 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 23 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 25 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS CTLA-4, FAB, ANTIBODY, IMMUNNOTHERAPY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR H.GAO,A.ZHOU REVDAT 4 09-OCT-24 6XY2 1 REMARK REVDAT 3 24-JAN-24 6XY2 1 REMARK REVDAT 2 23-DEC-20 6XY2 1 JRNL REVDAT 1 09-DEC-20 6XY2 0 JRNL AUTH H.GAO,H.CAI,J.LIU,X.WANG,P.ZHENG,M.DEVENPORT,T.XU,F.DOU, JRNL AUTH 2 Y.LIU,A.ZHOU JRNL TITL STRUCTURE OF CTLA-4 COMPLEXED WITH A PH-SENSITIVE CANCER JRNL TITL 2 IMMUNOTHERAPEUTIC ANTIBODY. JRNL REF CELL DISCOV V. 6 79 2020 JRNL REFN ESSN 2056-5968 JRNL PMID 33298884 JRNL DOI 10.1038/S41421-020-00202-9 REMARK 2 REMARK 2 RESOLUTION. 3.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 75.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 27133 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.251 REMARK 3 R VALUE (WORKING SET) : 0.249 REMARK 3 FREE R VALUE : 0.293 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1380 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 10.0000 - 6.5700 0.99 2705 153 0.2453 0.2553 REMARK 3 2 6.5700 - 5.2100 1.00 2612 153 0.2218 0.2984 REMARK 3 3 5.2100 - 4.5600 1.00 2597 136 0.1911 0.2369 REMARK 3 4 4.5600 - 4.1400 1.00 2576 132 0.2013 0.2784 REMARK 3 5 4.1400 - 3.8400 1.00 2570 123 0.2579 0.2925 REMARK 3 6 3.8400 - 3.6200 1.00 2588 120 0.2722 0.3648 REMARK 3 7 3.6200 - 3.4400 1.00 2540 136 0.2928 0.3122 REMARK 3 8 3.4400 - 3.2900 1.00 2534 148 0.3260 0.3733 REMARK 3 9 3.2900 - 3.1600 1.00 2497 146 0.3896 0.4221 REMARK 3 10 3.1600 - 3.0500 1.00 2534 133 0.4794 0.4794 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.536 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.734 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 100.7 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4260 REMARK 3 ANGLE : 0.553 5821 REMARK 3 CHIRALITY : 0.045 677 REMARK 3 PLANARITY : 0.004 742 REMARK 3 DIHEDRAL : 8.276 2504 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 28.2865 32.5359 -10.0469 REMARK 3 T TENSOR REMARK 3 T11: 0.9828 T22: 0.7293 REMARK 3 T33: 0.6932 T12: -0.1023 REMARK 3 T13: -0.0276 T23: -0.0641 REMARK 3 L TENSOR REMARK 3 L11: 0.7966 L22: 5.0754 REMARK 3 L33: 0.7159 L12: 1.0507 REMARK 3 L13: -0.2991 L23: -0.9918 REMARK 3 S TENSOR REMARK 3 S11: -0.1061 S12: 0.0744 S13: 0.1542 REMARK 3 S21: -0.0714 S22: 0.2478 S23: 0.0270 REMARK 3 S31: -0.1786 S32: 0.1090 S33: -0.1285 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6XY2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1292106302. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JAN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97892 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29874 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.950 REMARK 200 RESOLUTION RANGE LOW (A) : 85.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : 0.13300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.86500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3OSK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 77.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1M LI2SO4, 1.5M NH4SO4, 0.1M SODIUM REMARK 280 CITRATE, PH 6.5, BATCH MODE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.46750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 33.46750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 81.93100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 127.23900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 81.93100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 127.23900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 33.46750 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 81.93100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 127.23900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 33.46750 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 81.93100 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 127.23900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 120 REMARK 465 PRO A 121 REMARK 465 CYS A 122 REMARK 465 PRO A 123 REMARK 465 ASP A 124 REMARK 465 SER A 125 REMARK 465 GLN H 1 REMARK 465 SER H 144 REMARK 465 GLY H 145 REMARK 465 CYS H 228 REMARK 465 ASP H 229 REMARK 465 LYS H 230 REMARK 465 THR H 231 REMARK 465 HIS H 232 REMARK 465 THR H 233 REMARK 465 MET H 234 REMARK 465 ASP H 235 REMARK 465 PRO H 236 REMARK 465 GLY H 237 REMARK 465 GLY H 238 REMARK 465 SER H 239 REMARK 465 HIS H 240 REMARK 465 HIS H 241 REMARK 465 HIS H 242 REMARK 465 HIS H 243 REMARK 465 HIS H 244 REMARK 465 HIS H 245 REMARK 465 HIS H 246 REMARK 465 HIS H 247 REMARK 465 GLU L 213 REMARK 465 CYS L 214 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS H 64 CG CD CE NZ REMARK 470 LYS H 97 CG CD CE NZ REMARK 470 LYS H 129 CG CD CE NZ REMARK 470 LYS H 141 CG CD CE NZ REMARK 470 LYS H 226 CG CD CE NZ REMARK 470 ARG L 24 CG CD NE CZ NH1 NH2 REMARK 470 LYS L 45 CG CD CE NZ REMARK 470 LYS L 107 CG CD CE NZ REMARK 470 ARG L 108 CG CD NE CZ NH1 NH2 REMARK 470 ARG L 142 CG CD NE CZ NH1 NH2 REMARK 470 GLU L 143 CG CD OE1 OE2 REMARK 470 LYS L 169 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY H 33 H THR H 98 1.57 REMARK 500 O LEU H 171 H SER H 173 1.57 REMARK 500 O THR A 37 H LYS A 95 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 30 73.88 60.22 REMARK 500 ALA A 42 -154.22 -89.24 REMARK 500 ASP A 43 86.21 -65.72 REMARK 500 ASN A 58 -167.14 -160.73 REMARK 500 SER A 73 76.86 -167.38 REMARK 500 ASN A 75 51.93 -114.45 REMARK 500 MET A 99 -61.18 -90.58 REMARK 500 SER H 28 165.13 64.73 REMARK 500 THR H 30 146.88 -170.69 REMARK 500 ILE H 48 -66.05 -105.35 REMARK 500 SER H 84 71.76 38.05 REMARK 500 TYR H 109 61.58 37.38 REMARK 500 LYS H 141 118.75 -168.07 REMARK 500 SER H 142 -64.05 -90.57 REMARK 500 ASP H 156 79.69 61.36 REMARK 500 THR H 172 -46.45 56.68 REMARK 500 LEU H 201 -61.80 -122.92 REMARK 500 LYS H 226 52.95 -95.74 REMARK 500 LEU L 47 -60.76 -98.50 REMARK 500 ALA L 51 -52.54 75.94 REMARK 500 SER L 77 83.66 68.39 REMARK 500 LYS L 107 82.45 68.82 REMARK 500 ASN L 138 87.44 61.71 REMARK 500 GLU L 143 105.13 -54.12 REMARK 500 SER L 156 -70.52 -109.55 REMARK 500 LYS L 190 -66.70 -103.54 REMARK 500 REMARK 500 REMARK: NULL DBREF 6XY2 A 3 125 UNP P16410 CTLA4_HUMAN 38 160 DBREF 6XY2 H 1 247 PDB 6XY2 6XY2 1 247 DBREF 6XY2 L 1 214 PDB 6XY2 6XY2 1 214 SEQRES 1 A 123 MET HIS VAL ALA GLN PRO ALA VAL VAL LEU ALA SER SER SEQRES 2 A 123 ARG GLY ILE ALA SER PHE VAL CYS GLU TYR ALA SER PRO SEQRES 3 A 123 GLY LYS ALA THR GLU VAL ARG VAL THR VAL LEU ARG GLN SEQRES 4 A 123 ALA ASP SER GLN VAL THR GLU VAL CYS ALA ALA THR TYR SEQRES 5 A 123 MET MET GLY ASN GLU LEU THR PHE LEU ASP ASP SER ILE SEQRES 6 A 123 CYS THR GLY THR SER SER GLY ASN GLN VAL ASN LEU THR SEQRES 7 A 123 ILE GLN GLY LEU ARG ALA MET ASP THR GLY LEU TYR ILE SEQRES 8 A 123 CYS LYS VAL GLU LEU MET TYR PRO PRO PRO TYR TYR LEU SEQRES 9 A 123 GLY ILE GLY ASN GLY THR GLN ILE TYR VAL ILE ASP PRO SEQRES 10 A 123 GLU PRO CYS PRO ASP SER SEQRES 1 H 247 GLN VAL GLN LEU GLN GLU SER GLY PRO GLY LEU VAL LYS SEQRES 2 H 247 PRO SER GLU THR LEU SER LEU THR CYS THR VAL SER GLY SEQRES 3 H 247 PHE SER LEU THR SER TYR GLY LEU SER TRP ILE ARG GLN SEQRES 4 H 247 PRO PRO GLY LYS GLY LEU GLU TRP ILE GLY TYR ILE TRP SEQRES 5 H 247 TYR ASP GLY ASN THR ASN PHE HIS SER PRO LEU LYS SER SEQRES 6 H 247 ARG VAL THR ILE SER VAL ASP THR SER LYS ASN GLN PHE SEQRES 7 H 247 SER LEU LYS LEU SER SER VAL THR ALA ALA ASP THR ALA SEQRES 8 H 247 VAL TYR TYR CYS ALA LYS THR GLU GLY HIS TYR TYR GLY SEQRES 9 H 247 SER ASN TYR GLY TYR TYR ALA LEU ASP TYR TRP GLY GLN SEQRES 10 H 247 GLY THR LEU VAL THR VAL SER SER ALA SER THR LYS GLY SEQRES 11 H 247 PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SEQRES 12 H 247 SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP SEQRES 13 H 247 TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY SEQRES 14 H 247 ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU SEQRES 15 H 247 GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR SEQRES 16 H 247 VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS SEQRES 17 H 247 ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS SEQRES 18 H 247 ARG VAL GLU PRO LYS SER CYS ASP LYS THR HIS THR MET SEQRES 19 H 247 ASP PRO GLY GLY SER HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 1 L 214 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 214 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 214 GLU ASN ILE TYR SER ASN LEU ALA TRP TYR GLN GLN LYS SEQRES 4 L 214 GLN GLY LYS ALA PRO LYS LEU LEU LEU TYR ALA ALA THR SEQRES 5 L 214 ASN LEU GLN ASP GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR ASP TYR THR LEU THR ILE SER SER LEU SEQRES 7 L 214 GLN PRO GLU ASP PHE ALA THR TYR PHE CYS GLN HIS LEU SEQRES 8 L 214 TRP GLY THR PRO TYR THR PHE GLY GLN GLY THR LYS LEU SEQRES 9 L 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS HET NAG A 201 28 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 4 NAG C8 H15 N O6 HELIX 1 AA1 ARG A 85 THR A 89 5 5 HELIX 2 AA2 THR H 86 THR H 90 5 5 HELIX 3 AA3 GLN L 79 PHE L 83 5 5 HELIX 4 AA4 SER L 121 SER L 127 1 7 HELIX 5 AA5 LYS L 183 GLU L 187 1 5 SHEET 1 AA1 4 VAL A 5 ALA A 6 0 SHEET 2 AA1 4 ILE A 18 TYR A 25 -1 O GLU A 24 N ALA A 6 SHEET 3 AA1 4 GLN A 76 GLN A 82 -1 O LEU A 79 N PHE A 21 SHEET 4 AA1 4 CYS A 68 THR A 69 -1 N THR A 69 O THR A 80 SHEET 1 AA2 6 VAL A 10 LEU A 12 0 SHEET 2 AA2 6 THR A 112 TYR A 115 1 O TYR A 115 N VAL A 11 SHEET 3 AA2 6 GLY A 90 TYR A 100 -1 N TYR A 92 O THR A 112 SHEET 4 AA2 6 GLU A 33 ALA A 42 -1 N THR A 37 O LYS A 95 SHEET 5 AA2 6 GLN A 45 MET A 55 -1 O ALA A 52 N VAL A 36 SHEET 6 AA2 6 LEU A 60 PHE A 62 -1 O THR A 61 N THR A 53 SHEET 1 AA3 4 VAL A 10 LEU A 12 0 SHEET 2 AA3 4 THR A 112 TYR A 115 1 O TYR A 115 N VAL A 11 SHEET 3 AA3 4 GLY A 90 TYR A 100 -1 N TYR A 92 O THR A 112 SHEET 4 AA3 4 TYR A 105 ILE A 108 -1 O GLY A 107 N VAL A 96 SHEET 1 AA4 4 GLN H 3 SER H 7 0 SHEET 2 AA4 4 THR H 21 SER H 25 -1 O THR H 23 N GLN H 5 SHEET 3 AA4 4 GLN H 77 SER H 79 -1 O PHE H 78 N CYS H 22 SHEET 4 AA4 4 SER H 70 ASP H 72 -1 N ASP H 72 O GLN H 77 SHEET 1 AA5 5 LEU H 11 VAL H 12 0 SHEET 2 AA5 5 THR H 119 VAL H 123 1 O THR H 122 N VAL H 12 SHEET 3 AA5 5 ALA H 91 TYR H 103 -1 N TYR H 93 O THR H 119 SHEET 4 AA5 5 GLY H 33 GLN H 39 -1 N GLY H 33 O THR H 98 SHEET 5 AA5 5 GLU H 46 TRP H 52 -1 O ILE H 51 N LEU H 34 SHEET 1 AA6 4 LEU H 11 VAL H 12 0 SHEET 2 AA6 4 THR H 119 VAL H 123 1 O THR H 122 N VAL H 12 SHEET 3 AA6 4 ALA H 91 TYR H 103 -1 N TYR H 93 O THR H 119 SHEET 4 AA6 4 ASN H 106 TRP H 115 -1 O TYR H 114 N LYS H 97 SHEET 1 AA7 2 LEU H 18 SER H 19 0 SHEET 2 AA7 2 LYS H 81 LEU H 82 -1 O LEU H 82 N LEU H 18 SHEET 1 AA8 4 SER H 132 LEU H 136 0 SHEET 2 AA8 4 ALA H 148 TYR H 157 -1 O LYS H 155 N SER H 132 SHEET 3 AA8 4 TYR H 188 VAL H 196 -1 O TYR H 188 N TYR H 157 SHEET 4 AA8 4 VAL H 175 THR H 177 -1 N HIS H 176 O VAL H 193 SHEET 1 AA9 4 SER H 132 LEU H 136 0 SHEET 2 AA9 4 ALA H 148 TYR H 157 -1 O LYS H 155 N SER H 132 SHEET 3 AA9 4 TYR H 188 VAL H 196 -1 O TYR H 188 N TYR H 157 SHEET 4 AA9 4 VAL H 181 LEU H 182 -1 N VAL H 181 O SER H 189 SHEET 1 AB1 3 THR H 163 TRP H 166 0 SHEET 2 AB1 3 ILE H 207 HIS H 212 -1 O ASN H 209 N SER H 165 SHEET 3 AB1 3 THR H 217 ARG H 222 -1 O THR H 217 N HIS H 212 SHEET 1 AB2 4 MET L 4 SER L 7 0 SHEET 2 AB2 4 THR L 22 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AB2 4 ASP L 70 ILE L 75 -1 O TYR L 71 N CYS L 23 SHEET 4 AB2 4 PHE L 62 SER L 67 -1 N SER L 65 O THR L 72 SHEET 1 AB3 6 SER L 10 SER L 12 0 SHEET 2 AB3 6 THR L 102 GLU L 105 1 O LYS L 103 N LEU L 11 SHEET 3 AB3 6 THR L 85 HIS L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AB3 6 LEU L 33 GLN L 38 -1 N ALA L 34 O GLN L 89 SHEET 5 AB3 6 LYS L 45 TYR L 49 -1 O LYS L 45 N GLN L 37 SHEET 6 AB3 6 ASN L 53 LEU L 54 -1 O ASN L 53 N TYR L 49 SHEET 1 AB4 4 SER L 114 PHE L 118 0 SHEET 2 AB4 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB4 4 TYR L 173 SER L 182 -1 O LEU L 179 N VAL L 132 SHEET 4 AB4 4 SER L 159 GLN L 160 -1 N GLN L 160 O THR L 178 SHEET 1 AB5 4 SER L 114 PHE L 118 0 SHEET 2 AB5 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB5 4 TYR L 173 SER L 182 -1 O LEU L 179 N VAL L 132 SHEET 4 AB5 4 VAL L 163 THR L 164 -1 N THR L 164 O SER L 174 SHEET 1 AB6 4 LEU L 154 GLN L 155 0 SHEET 2 AB6 4 LYS L 145 VAL L 150 -1 N TRP L 148 O GLN L 155 SHEET 3 AB6 4 VAL L 191 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 AB6 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS A 23 CYS A 94 1555 1555 2.04 SSBOND 2 CYS A 50 CYS A 68 1555 1555 2.04 SSBOND 3 CYS H 22 CYS H 95 1555 1555 2.04 SSBOND 4 CYS H 152 CYS H 208 1555 1555 2.04 SSBOND 5 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 6 CYS L 134 CYS L 194 1555 1555 2.04 LINK ND2 ASN A 78 C1 NAG A 201 1555 1555 1.53 CISPEP 1 TYR A 100 PRO A 101 0 -1.84 CISPEP 2 PRO A 102 PRO A 103 0 2.39 CISPEP 3 PHE H 158 PRO H 159 0 -4.34 CISPEP 4 GLU H 160 PRO H 161 0 -3.29 CISPEP 5 SER L 7 PRO L 8 0 -3.71 CISPEP 6 TYR L 140 PRO L 141 0 0.57 CRYST1 163.862 254.478 66.935 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006103 0.000000 0.000000 0.00000 SCALE2 0.000000 0.003930 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014940 0.00000