HEADER TRANSFERASE 07-FEB-20 6Y0B TITLE CRYSTAL STRUCTURE OF THE CAMP-DEPENDENT PROTEIN KINASE A TITLE 2 COCRYSTALLIZED WITH QUINAZOLIN-4-AMINE AND PKI (5-24) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PKA C-ALPHA; COMPND 5 EC: 2.7.11.11; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: THE FIRST AMINOACID (G) IS NUMBERED AS -2 -> THEREFORE COMPND 8 METHIONINE IS NUMBER 0. THE LAST AMINOACID IS NUMBER 350.; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA; COMPND 11 CHAIN: B; COMPND 12 SYNONYM: PKI-ALPHA,CAMP-DEPENDENT PROTEIN KINASE INHIBITOR, COMPND 13 MUSCLE/BRAIN ISOFORM; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRICETULUS GRISEUS; SOURCE 3 ORGANISM_COMMON: CHINESE HAMSTER; SOURCE 4 ORGANISM_TAXID: 10029; SOURCE 5 GENE: PRKACA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 12 ORGANISM_TAXID: 10090 KEYWDS PHOSPHOTRANSFERASE, SIGNALLING PATHWAYS, GLYCOGEN METABOLISM, KEYWDS 2 SERINE/THREONINE KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.OEBBEKE,B.WIENEN-SCHMIDT,A.HEINE,G.KLEBE REVDAT 2 24-JAN-24 6Y0B 1 REMARK REVDAT 1 17-FEB-21 6Y0B 0 JRNL AUTH M.OEBBEKE,B.WIENEN-SCHMIDT,H.-D.GERBER,A.HEINE,G.KLEBE JRNL TITL FRAGMENT BASED DRUG DESIGN - SMALL CHEMICAL CHANGES OF JRNL TITL 2 FRAGMENTS EFFECTING BIG CHANGES IN BINDING JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.8 REMARK 3 NUMBER OF REFLECTIONS : 45904 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2296 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.4700 - 4.3200 0.98 3130 165 0.1596 0.1692 REMARK 3 2 4.3200 - 3.4300 0.99 3011 159 0.1487 0.1815 REMARK 3 3 3.4300 - 2.9900 0.99 2987 157 0.1755 0.2051 REMARK 3 4 2.9900 - 2.7200 1.00 2971 157 0.1883 0.2288 REMARK 3 5 2.7200 - 2.5200 1.00 2954 155 0.1938 0.2166 REMARK 3 6 2.5200 - 2.3800 0.98 2936 155 0.1910 0.2306 REMARK 3 7 2.3800 - 2.2600 0.98 2873 151 0.1913 0.2299 REMARK 3 8 2.2600 - 2.1600 0.96 2840 149 0.1870 0.2399 REMARK 3 9 2.1600 - 2.0800 0.95 2796 147 0.1913 0.2294 REMARK 3 10 2.0800 - 2.0000 0.92 2699 142 0.1952 0.2342 REMARK 3 11 2.0000 - 1.9400 0.90 2654 140 0.2004 0.2238 REMARK 3 12 1.9400 - 1.8900 0.85 2508 132 0.1999 0.2371 REMARK 3 13 1.8900 - 1.8400 0.81 2355 124 0.2069 0.2785 REMARK 3 14 1.8400 - 1.7900 0.83 2437 128 0.2111 0.2867 REMARK 3 15 1.7900 - 1.7500 0.83 2413 127 0.2213 0.2850 REMARK 3 16 1.7500 - 1.7100 0.70 2044 108 0.2246 0.2551 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.175 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.127 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3079 REMARK 3 ANGLE : 0.809 4184 REMARK 3 CHIRALITY : 0.052 445 REMARK 3 PLANARITY : 0.005 553 REMARK 3 DIHEDRAL : 15.102 1825 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.1577 -8.9143 0.9842 REMARK 3 T TENSOR REMARK 3 T11: 0.1810 T22: 0.1953 REMARK 3 T33: 0.2425 T12: 0.0272 REMARK 3 T13: -0.0244 T23: 0.0483 REMARK 3 L TENSOR REMARK 3 L11: 5.7799 L22: 1.9691 REMARK 3 L33: 5.5876 L12: -1.5938 REMARK 3 L13: -3.1598 L23: 1.2930 REMARK 3 S TENSOR REMARK 3 S11: 0.3080 S12: 0.5792 S13: 0.2516 REMARK 3 S21: -0.2540 S22: -0.1897 S23: -0.0031 REMARK 3 S31: -0.4747 S32: -0.1358 S33: -0.1249 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.8769 -23.9355 29.8549 REMARK 3 T TENSOR REMARK 3 T11: 0.2055 T22: 0.3322 REMARK 3 T33: 0.4325 T12: 0.0343 REMARK 3 T13: 0.0060 T23: 0.0470 REMARK 3 L TENSOR REMARK 3 L11: 0.9944 L22: 7.5531 REMARK 3 L33: 3.7504 L12: 0.1735 REMARK 3 L13: -1.1809 L23: -0.8971 REMARK 3 S TENSOR REMARK 3 S11: 0.0590 S12: -0.1621 S13: 0.4890 REMARK 3 S21: 0.3130 S22: 0.0915 S23: 0.1868 REMARK 3 S31: -0.0049 S32: -0.1355 S33: -0.0911 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.1388 -13.6921 31.5288 REMARK 3 T TENSOR REMARK 3 T11: 0.1890 T22: 0.2586 REMARK 3 T33: 0.2099 T12: 0.0224 REMARK 3 T13: 0.0173 T23: -0.0205 REMARK 3 L TENSOR REMARK 3 L11: 2.7710 L22: 5.0160 REMARK 3 L33: 3.5185 L12: 2.3811 REMARK 3 L13: -0.8190 L23: 0.4044 REMARK 3 S TENSOR REMARK 3 S11: 0.2507 S12: -0.4021 S13: -0.0219 REMARK 3 S21: 0.6570 S22: -0.0856 S23: -0.2133 REMARK 3 S31: -0.0073 S32: 0.1671 S33: -0.1675 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 98 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.6851 -22.4714 19.0322 REMARK 3 T TENSOR REMARK 3 T11: 0.1105 T22: 0.1356 REMARK 3 T33: 0.1163 T12: -0.0184 REMARK 3 T13: 0.0050 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.8823 L22: 1.1757 REMARK 3 L33: 0.6014 L12: 0.0101 REMARK 3 L13: 0.0565 L23: -0.0465 REMARK 3 S TENSOR REMARK 3 S11: 0.0238 S12: -0.0857 S13: -0.0628 REMARK 3 S21: 0.0800 S22: -0.0138 S23: 0.1598 REMARK 3 S31: 0.0234 S32: -0.1077 S33: 0.0076 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 180 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.8704 -9.6650 22.9774 REMARK 3 T TENSOR REMARK 3 T11: 0.1882 T22: 0.1614 REMARK 3 T33: 0.1619 T12: 0.0331 REMARK 3 T13: -0.0034 T23: -0.0505 REMARK 3 L TENSOR REMARK 3 L11: 4.0546 L22: 4.8315 REMARK 3 L33: 4.0446 L12: 3.1253 REMARK 3 L13: 2.7420 L23: 3.0486 REMARK 3 S TENSOR REMARK 3 S11: -0.0404 S12: -0.1174 S13: 0.2767 REMARK 3 S21: 0.1098 S22: -0.0538 S23: 0.3759 REMARK 3 S31: -0.2634 S32: -0.1702 S33: 0.0433 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 199 THROUGH 272 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.6451 -19.4160 20.3384 REMARK 3 T TENSOR REMARK 3 T11: 0.0912 T22: 0.1178 REMARK 3 T33: 0.1255 T12: -0.0134 REMARK 3 T13: -0.0158 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.1461 L22: 2.4341 REMARK 3 L33: 1.6759 L12: -0.4434 REMARK 3 L13: 0.0295 L23: 0.1527 REMARK 3 S TENSOR REMARK 3 S11: -0.0135 S12: -0.0530 S13: 0.1008 REMARK 3 S21: 0.1787 S22: -0.0193 S23: -0.3031 REMARK 3 S31: -0.0661 S32: 0.1102 S33: 0.0237 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 273 THROUGH 316 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.0637 -18.6362 6.4062 REMARK 3 T TENSOR REMARK 3 T11: 0.1328 T22: 0.0955 REMARK 3 T33: 0.1033 T12: 0.0156 REMARK 3 T13: 0.0008 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 3.3023 L22: 2.1112 REMARK 3 L33: 2.2560 L12: 0.5777 REMARK 3 L13: 0.8750 L23: 0.4952 REMARK 3 S TENSOR REMARK 3 S11: 0.0080 S12: 0.2974 S13: 0.0502 REMARK 3 S21: -0.0838 S22: -0.0141 S23: -0.0341 REMARK 3 S31: -0.0898 S32: 0.0987 S33: 0.0349 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 317 THROUGH 350 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.4671 -22.5579 34.5395 REMARK 3 T TENSOR REMARK 3 T11: 0.2452 T22: 0.4263 REMARK 3 T33: 0.2898 T12: -0.0327 REMARK 3 T13: -0.0415 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 3.5301 L22: 7.0685 REMARK 3 L33: 4.1301 L12: -2.4973 REMARK 3 L13: -2.7732 L23: 3.6548 REMARK 3 S TENSOR REMARK 3 S11: -0.0554 S12: -0.6099 S13: -0.0514 REMARK 3 S21: 0.7791 S22: 0.0452 S23: -0.0108 REMARK 3 S31: 0.4337 S32: 0.2461 S33: 0.0333 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 5 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9020 -33.7036 26.6882 REMARK 3 T TENSOR REMARK 3 T11: 0.1800 T22: 0.1862 REMARK 3 T33: 0.1802 T12: 0.0184 REMARK 3 T13: 0.0048 T23: 0.0637 REMARK 3 L TENSOR REMARK 3 L11: 5.9496 L22: 5.0182 REMARK 3 L33: 8.2992 L12: -1.4127 REMARK 3 L13: 2.6292 L23: 4.8145 REMARK 3 S TENSOR REMARK 3 S11: 0.0724 S12: -0.0339 S13: -0.2227 REMARK 3 S21: 0.2714 S22: 0.0618 S23: -0.2738 REMARK 3 S31: 0.2085 S32: 0.2156 S33: -0.1140 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 14 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.8529 -24.2179 31.4857 REMARK 3 T TENSOR REMARK 3 T11: 0.2090 T22: 0.1613 REMARK 3 T33: 0.1074 T12: -0.0144 REMARK 3 T13: 0.0071 T23: 0.0453 REMARK 3 L TENSOR REMARK 3 L11: 9.0853 L22: 2.7848 REMARK 3 L33: 6.3474 L12: -2.4189 REMARK 3 L13: -0.2481 L23: -0.3580 REMARK 3 S TENSOR REMARK 3 S11: 0.1583 S12: -0.5090 S13: 0.0439 REMARK 3 S21: 0.5426 S22: -0.0176 S23: -0.0004 REMARK 3 S31: -0.0470 S32: 0.0343 S33: -0.1592 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Y0B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1292106642. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91840 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51100 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.640 REMARK 200 RESOLUTION RANGE LOW (A) : 45.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.3 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04600 REMARK 200 FOR THE DATA SET : 17.6700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.52200 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6F14 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES-BIS-TRIS-BUFFER, 1 MM REMARK 280 DITHIOTHREITOL, 0.1 MM SODIUM EDTA, 75 MM LICL, 0.2 MEGA 8, 10MM REMARK 280 QUINAZOLIN-4-AMINE IN DMSO, 0.5 MM PKI (5-24) AND 22 % METHANOL REMARK 280 (V/V)0.003 ML DROP VOLUME, 0.5 ML RESERVOIR VOLUME, PH 6.9, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.03300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.82000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.54850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.82000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.03300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.54850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 34 REMARK 465 GLN A 35 REMARK 465 ASP B 24 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 21 CD CE NZ REMARK 470 GLU A 25 CD OE1 OE2 REMARK 470 LYS A 28 CG CD CE NZ REMARK 470 LYS A 29 CE NZ REMARK 470 GLU A 31 CG CD OE1 OE2 REMARK 470 SER A 32 OG REMARK 470 ASN A 36 CG OD1 ND2 REMARK 470 ARG A 45 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 47 CE NZ REMARK 470 ARG A 56 CD NE CZ NH1 NH2 REMARK 470 LYS A 61 CE NZ REMARK 470 THR A 65 CG2 REMARK 470 LYS A 78 NZ REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 LEU A 82 CD1 CD2 REMARK 470 LYS A 83 CE NZ REMARK 470 GLN A 176 OE1 NE2 REMARK 470 LYS A 192 CG CD CE NZ REMARK 470 LYS A 217 CD CE NZ REMARK 470 ILE A 244 CD1 REMARK 470 LYS A 254 CE NZ REMARK 470 ARG A 256 CD NE CZ NH1 NH2 REMARK 470 LYS A 285 CG CD CE NZ REMARK 470 GLU A 311 CG CD OE1 OE2 REMARK 470 LYS A 317 CG CD CE NZ REMARK 470 PHE A 318 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 319 CG CD CE NZ REMARK 470 GLU A 331 CG CD OE1 OE2 REMARK 470 GLU A 333 CG CD OE1 OE2 REMARK 470 GLU A 334 CG CD OE1 OE2 REMARK 470 ILE A 335 CG1 CG2 CD1 REMARK 470 ARG A 336 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 339 CG1 CG2 CD1 REMARK 470 LYS A 342 NZ REMARK 470 LYS A 345 CD CE NZ REMARK 470 HIS B 23 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 166 45.94 -143.37 REMARK 500 LEU A 273 47.92 -88.05 REMARK 500 ARG B 15 48.38 -100.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 811 DISTANCE = 5.82 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1LQ A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 402 DBREF 6Y0B A 0 350 UNP P25321 KAPCA_CRIGR 1 351 DBREF 6Y0B B 5 24 UNP P63248 IPKA_MOUSE 6 25 SEQADV 6Y0B GLY A -2 UNP P25321 EXPRESSION TAG SEQADV 6Y0B HIS A -1 UNP P25321 EXPRESSION TAG SEQRES 1 A 353 GLY HIS MET GLY ASN ALA ALA ALA ALA LYS LYS GLY SEP SEQRES 2 A 353 GLU GLN GLU SER VAL LYS GLU PHE LEU ALA LYS ALA LYS SEQRES 3 A 353 GLU GLU PHE LEU LYS LYS TRP GLU SER PRO SER GLN ASN SEQRES 4 A 353 THR ALA GLN LEU ASP HIS PHE ASP ARG ILE LYS THR LEU SEQRES 5 A 353 GLY THR GLY SER PHE GLY ARG VAL MET LEU VAL LYS HIS SEQRES 6 A 353 LYS GLU THR GLY ASN HIS TYR ALA MET LYS ILE LEU ASP SEQRES 7 A 353 LYS GLN LYS VAL VAL LYS LEU LYS GLN ILE GLU HIS THR SEQRES 8 A 353 LEU ASN GLU LYS ARG ILE LEU GLN ALA VAL ASN PHE PRO SEQRES 9 A 353 PHE LEU VAL LYS LEU GLU PHE SER PHE LYS ASP ASN SER SEQRES 10 A 353 ASN LEU TYR MET VAL MET GLU TYR VAL PRO GLY GLY GLU SEQRES 11 A 353 MET PHE SER HIS LEU ARG ARG ILE GLY ARG PHE SER GLU SEQRES 12 A 353 PRO HIS ALA ARG PHE TYR ALA ALA GLN ILE VAL LEU THR SEQRES 13 A 353 PHE GLU TYR LEU HIS SER LEU ASP LEU ILE TYR ARG ASP SEQRES 14 A 353 LEU LYS PRO GLU ASN LEU LEU ILE ASP GLN GLN GLY TYR SEQRES 15 A 353 ILE GLN VAL THR ASP PHE GLY PHE ALA LYS ARG VAL LYS SEQRES 16 A 353 GLY ARG THR TRP TPO LEU CYS GLY THR PRO GLU TYR LEU SEQRES 17 A 353 ALA PRO GLU ILE ILE LEU SER LYS GLY TYR ASN LYS ALA SEQRES 18 A 353 VAL ASP TRP TRP ALA LEU GLY VAL LEU ILE TYR GLU MET SEQRES 19 A 353 ALA ALA GLY TYR PRO PRO PHE PHE ALA ASP GLN PRO ILE SEQRES 20 A 353 GLN ILE TYR GLU LYS ILE VAL SER GLY LYS VAL ARG PHE SEQRES 21 A 353 PRO SER HIS PHE SER SER ASP LEU LYS ASP LEU LEU ARG SEQRES 22 A 353 ASN LEU LEU GLN VAL ASP LEU THR LYS ARG PHE GLY ASN SEQRES 23 A 353 LEU LYS ASN GLY VAL ASN ASP ILE LYS ASN HIS LYS TRP SEQRES 24 A 353 PHE ALA THR THR ASP TRP ILE ALA ILE TYR GLN ARG LYS SEQRES 25 A 353 VAL GLU ALA PRO PHE ILE PRO LYS PHE LYS GLY PRO GLY SEQRES 26 A 353 ASP THR SER ASN PHE ASP ASP TYR GLU GLU GLU GLU ILE SEQRES 27 A 353 ARG VAL SEP ILE ASN GLU LYS CYS GLY LYS GLU PHE THR SEQRES 28 A 353 GLU PHE SEQRES 1 B 20 THR THR TYR ALA ASP PHE ILE ALA SER GLY ARG THR GLY SEQRES 2 B 20 ARG ARG ASN ALA ILE HIS ASP MODRES 6Y0B SEP A 10 SER MODIFIED RESIDUE MODRES 6Y0B TPO A 197 THR MODIFIED RESIDUE MODRES 6Y0B SEP A 338 SER MODIFIED RESIDUE HET SEP A 10 10 HET TPO A 197 11 HET SEP A 338 10 HET 1LQ A 401 11 HET DMS A 402 4 HETNAM SEP PHOSPHOSERINE HETNAM TPO PHOSPHOTHREONINE HETNAM 1LQ QUINAZOLIN-4-AMINE HETNAM DMS DIMETHYL SULFOXIDE HETSYN SEP PHOSPHONOSERINE HETSYN TPO PHOSPHONOTHREONINE FORMUL 1 SEP 2(C3 H8 N O6 P) FORMUL 1 TPO C4 H10 N O6 P FORMUL 3 1LQ C8 H7 N3 FORMUL 4 DMS C2 H6 O S FORMUL 5 HOH *333(H2 O) HELIX 1 AA1 GLY A 1 SER A 32 1 32 HELIX 2 AA2 GLN A 39 ASP A 41 5 3 HELIX 3 AA3 LYS A 76 LEU A 82 1 7 HELIX 4 AA4 GLN A 84 VAL A 98 1 15 HELIX 5 AA5 GLU A 127 GLY A 136 1 10 HELIX 6 AA6 SER A 139 LEU A 160 1 22 HELIX 7 AA7 LYS A 168 GLU A 170 5 3 HELIX 8 AA8 THR A 201 LEU A 205 5 5 HELIX 9 AA9 ALA A 206 LEU A 211 1 6 HELIX 10 AB1 LYS A 217 GLY A 234 1 18 HELIX 11 AB2 GLN A 242 SER A 252 1 11 HELIX 12 AB3 SER A 262 LEU A 273 1 12 HELIX 13 AB4 ASP A 276 ARG A 280 5 5 HELIX 14 AB5 VAL A 288 ASN A 293 1 6 HELIX 15 AB6 HIS A 294 ALA A 298 5 5 HELIX 16 AB7 ASP A 301 GLN A 307 1 7 HELIX 17 AB8 THR B 6 SER B 13 1 8 SHEET 1 AA1 5 PHE A 43 GLY A 52 0 SHEET 2 AA1 5 GLY A 55 HIS A 62 -1 O VAL A 57 N LEU A 49 SHEET 3 AA1 5 HIS A 68 ASP A 75 -1 O ILE A 73 N ARG A 56 SHEET 4 AA1 5 ASN A 115 GLU A 121 -1 O MET A 118 N LYS A 72 SHEET 5 AA1 5 LEU A 106 LYS A 111 -1 N PHE A 110 O TYR A 117 SHEET 1 AA2 2 LEU A 162 ILE A 163 0 SHEET 2 AA2 2 LYS A 189 ARG A 190 -1 O LYS A 189 N ILE A 163 SHEET 1 AA3 2 LEU A 172 ILE A 174 0 SHEET 2 AA3 2 ILE A 180 VAL A 182 -1 O GLN A 181 N LEU A 173 LINK C GLY A 9 N SEP A 10 1555 1555 1.33 LINK C SEP A 10 N GLU A 11 1555 1555 1.33 LINK C TRP A 196 N TPO A 197 1555 1555 1.33 LINK C TPO A 197 N LEU A 198 1555 1555 1.33 LINK C VAL A 337 N SEP A 338 1555 1555 1.33 LINK C SEP A 338 N ILE A 339 1555 1555 1.33 SITE 1 AC1 9 VAL A 57 ALA A 70 MET A 120 GLU A 121 SITE 2 AC1 9 TYR A 122 VAL A 123 LEU A 173 THR A 183 SITE 3 AC1 9 PHE A 327 SITE 1 AC2 3 VAL A 15 PHE A 18 HOH A 602 CRYST1 58.066 73.097 107.640 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017222 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013680 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009290 0.00000