data_6Y1Q # _entry.id 6Y1Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6Y1Q pdb_00006y1q 10.2210/pdb6y1q/pdb WWPDB D_1292106722 ? ? BMRB 34491 ? 10.13018/BMR34491 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-01-27 2 'Structure model' 1 1 2021-04-07 3 'Structure model' 1 2 2022-12-28 4 'Structure model' 2 0 2023-11-15 5 'Structure model' 3 0 2024-07-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' 'Non-polymer description' 10 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' database_2 4 4 'Structure model' atom_site 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' struct_conn 8 5 'Structure model' chem_comp 9 5 'Structure model' chem_comp_atom 10 5 'Structure model' chem_comp_bond 11 5 'Structure model' database_2 12 5 'Structure model' entity 13 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_DOI' 5 2 'Structure model' '_citation.pdbx_database_id_PubMed' 6 2 'Structure model' '_citation.title' 7 2 'Structure model' '_citation_author.identifier_ORCID' 8 3 'Structure model' '_database_2.pdbx_DOI' 9 3 'Structure model' '_database_2.pdbx_database_accession' 10 4 'Structure model' '_atom_site.auth_atom_id' 11 4 'Structure model' '_atom_site.label_atom_id' 12 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 13 5 'Structure model' '_chem_comp.formula' 14 5 'Structure model' '_chem_comp.formula_weight' 15 5 'Structure model' '_database_2.pdbx_DOI' 16 5 'Structure model' '_entity.formula_weight' 17 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6Y1Q _pdbx_database_status.recvd_initial_deposition_date 2020-02-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Cortistatin analog with improved immunoregulatory activity' _pdbx_database_related.db_id 34491 _pdbx_database_related.content_type unspecified # _audit_author.name 'Rol, A.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first 1869 _citation.page_last 1869 _citation.title 'Structure-based design of a Cortistatin analogue with immunomodulatory activity in models of inflammatory bowel disease.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-021-22076-5 _citation.pdbx_database_id_PubMed 33767180 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rol, A.' 1 ? primary 'Todorovski, T.' 2 0000-0002-9168-2830 primary 'Martin-Malpartida, P.' 3 0000-0001-5867-5535 primary 'Escola, A.' 4 ? primary 'Gonzalez-Rey, E.' 5 ? primary 'Aragon, E.' 6 ? primary 'Verdaguer, X.' 7 ? primary 'Valles-Miret, M.' 8 0000-0003-3712-1634 primary 'Farrera-Sinfreu, J.' 9 ? primary 'Puig, E.' 10 0000-0003-3506-2829 primary 'Fernandez-Carneado, J.' 11 ? primary 'Ponsati, B.' 12 ? primary 'Delgado, M.' 13 0000-0003-1893-5982 primary 'Riera, A.' 14 0000-0001-7142-7675 primary 'Macias, M.J.' 15 0000-0002-6915-963X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Analog 5' 1782.154 1 ? ? ? ? 2 non-polymer syn 'OCTANOIC ACID (CAPRYLIC ACID)' 144.211 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'PCKN(O6H)F(DTR)KTFTSCK' _entity_poly.pdbx_seq_one_letter_code_can PCKNWFWKTFTSCK _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'OCTANOIC ACID (CAPRYLIC ACID)' _pdbx_entity_nonpoly.comp_id OCA # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 CYS n 1 3 LYS n 1 4 ASN n 1 5 O6H n 1 6 PHE n 1 7 DTR n 1 8 LYS n 1 9 THR n 1 10 PHE n 1 11 THR n 1 12 SER n 1 13 CYS n 1 14 LYS n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 14 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DTR 'D-peptide linking' . D-TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 O6H 'L-peptide linking' n 2,4,6-trimethyl-L-phenylalanine '(2~{S})-2-azanyl-3-(2,4,6-trimethylphenyl)propanal' 'C12 H17 N O2' 207.269 OCA non-polymer . 'OCTANOIC ACID (CAPRYLIC ACID)' ? 'C8 H16 O2' 144.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 2 2 PRO PRO A . n A 1 2 CYS 2 3 3 CYS CYS A . n A 1 3 LYS 3 4 4 LYS LYS A . n A 1 4 ASN 4 5 5 ASN ASN A . n A 1 5 O6H 5 6 6 O6H MSA A . n A 1 6 PHE 6 7 7 PHE PHE A . n A 1 7 DTR 7 8 8 DTR DTR A . n A 1 8 LYS 8 9 9 LYS LYS A . n A 1 9 THR 9 10 10 THR THR A . n A 1 10 PHE 10 11 11 PHE PHE A . n A 1 11 THR 11 12 12 THR THR A . n A 1 12 SER 12 13 13 SER SER A . n A 1 13 CYS 13 14 14 CYS CYS A . n A 1 14 LYS 14 15 15 LYS LYS A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id OCA _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id OCA _pdbx_nonpoly_scheme.auth_mon_id OCT _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6Y1Q _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6Y1Q _struct.title 'Cortistatin analog with improved immunoregulatory activity' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6Y1Q _struct_keywords.text 'Peptidomimetic, Analogue, Medical Chemistry, HORMONE' _struct_keywords.pdbx_keywords HORMONE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6Y1Q _struct_ref.pdbx_db_accession 6Y1Q _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6Y1Q _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 14 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6Y1Q _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 15 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 15 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 250 ? 1 MORE 4 ? 1 'SSA (A^2)' 1720 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 13 SG ? ? A CYS 3 A CYS 14 1_555 ? ? ? ? ? ? ? 2.031 ? ? covale1 covale both ? A PRO 1 N ? ? ? 1_555 B OCA . C1 ? ? A PRO 2 A OCA 101 1_555 ? ? ? ? ? ? ? 1.356 ? ? covale2 covale both ? A ASN 4 C ? ? ? 1_555 A O6H 5 N ? ? A ASN 5 A O6H 6 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale3 covale both ? A O6H 5 C ? ? ? 1_555 A PHE 6 N ? ? A O6H 6 A PHE 7 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale4 covale both ? A PHE 6 C ? ? ? 1_555 A DTR 7 N ? ? A PHE 7 A DTR 8 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale5 covale both ? A DTR 7 C ? ? ? 1_555 A LYS 8 N ? ? A DTR 8 A LYS 9 1_555 ? ? ? ? ? ? ? 1.337 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 CYS A 2 ? LYS A 3 ? CYS A 3 LYS A 4 AA1 2 SER A 12 ? CYS A 13 ? SER A 13 CYS A 14 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id LYS _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 3 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id LYS _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 4 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id SER _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 12 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id SER _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 13 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A OCA 101 ? 3 'binding site for residue OCA A 101' AC2 Software A O6H 6 ? 3 'binding site for Ligand residues O6H A 6 through PHE A 7 bound to ASN A 5' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 PRO A 1 ? PRO A 2 . ? 1_555 ? 2 AC1 3 CYS A 2 ? CYS A 3 . ? 1_555 ? 3 AC1 3 LYS A 3 ? LYS A 4 . ? 1_555 ? 4 AC2 3 ASN A 4 ? ASN A 5 . ? 1_555 ? 5 AC2 3 DTR A 7 ? DTR A 8 . ? 1_555 ? 6 AC2 3 PHE A 10 ? PHE A 11 . ? 1_555 ? # _pdbx_entry_details.entry_id 6Y1Q _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_nmr_ensemble.entry_id 6Y1Q _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6Y1Q _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1 mM Analog 5, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label sample1 _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component 'Analog 5' _pdbx_nmr_exptl_sample.concentration 1 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 285 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label conditions1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D NOESY' 1 isotropic 2 1 1 '2D TOCSY' 1 isotropic # _pdbx_nmr_refine.entry_id 6Y1Q _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement X-PLOR ? Brunger 2 'structure calculation' X-PLOR ? Brunger 3 'chemical shift assignment' XEASY ? 'Bartels et al.' 4 'peak picking' XEASY ? 'Bartels et al.' 5 collection TopSpin ? 'Bruker Biospin' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ASN N N N N 1 ASN CA C N S 2 ASN C C N N 3 ASN O O N N 4 ASN CB C N N 5 ASN CG C N N 6 ASN OD1 O N N 7 ASN ND2 N N N 8 ASN OXT O N N 9 ASN H H N N 10 ASN H2 H N N 11 ASN HA H N N 12 ASN HB2 H N N 13 ASN HB3 H N N 14 ASN HD21 H N N 15 ASN HD22 H N N 16 ASN HXT H N N 17 CYS N N N N 18 CYS CA C N R 19 CYS C C N N 20 CYS O O N N 21 CYS CB C N N 22 CYS SG S N N 23 CYS OXT O N N 24 CYS H H N N 25 CYS H2 H N N 26 CYS HA H N N 27 CYS HB2 H N N 28 CYS HB3 H N N 29 CYS HG H N N 30 CYS HXT H N N 31 DTR N N N N 32 DTR CA C N R 33 DTR CB C N N 34 DTR CG C Y N 35 DTR CD1 C Y N 36 DTR NE1 N Y N 37 DTR CE2 C Y N 38 DTR CZ2 C Y N 39 DTR CH2 C Y N 40 DTR CZ3 C Y N 41 DTR CE3 C Y N 42 DTR CD2 C Y N 43 DTR C C N N 44 DTR O O N N 45 DTR OXT O N N 46 DTR H H N N 47 DTR H2 H N N 48 DTR HA H N N 49 DTR HB2 H N N 50 DTR HB3 H N N 51 DTR HD1 H N N 52 DTR HE1 H N N 53 DTR HZ2 H N N 54 DTR HH2 H N N 55 DTR HZ3 H N N 56 DTR HE3 H N N 57 DTR HXT H N N 58 LYS N N N N 59 LYS CA C N S 60 LYS C C N N 61 LYS O O N N 62 LYS CB C N N 63 LYS CG C N N 64 LYS CD C N N 65 LYS CE C N N 66 LYS NZ N N N 67 LYS OXT O N N 68 LYS H H N N 69 LYS H2 H N N 70 LYS HA H N N 71 LYS HB2 H N N 72 LYS HB3 H N N 73 LYS HG2 H N N 74 LYS HG3 H N N 75 LYS HD2 H N N 76 LYS HD3 H N N 77 LYS HE2 H N N 78 LYS HE3 H N N 79 LYS HZ1 H N N 80 LYS HZ2 H N N 81 LYS HZ3 H N N 82 LYS HXT H N N 83 O6H N N N N 84 O6H CA C N S 85 O6H C C N N 86 O6H O O N N 87 O6H CG C Y N 88 O6H CB C N N 89 O6H CD1 C Y N 90 O6H CF1 C N N 91 O6H CD2 C Y N 92 O6H CF2 C N N 93 O6H CE1 C Y N 94 O6H CE2 C Y N 95 O6H CZ C Y N 96 O6H CH C N N 97 O6H H H N N 98 O6H H2 H N N 99 O6H HA H N N 100 O6H HB1 H N N 101 O6H HB2 H N N 102 O6H HF11 H N N 103 O6H HF12 H N N 104 O6H HF13 H N N 105 O6H HF23 H N N 106 O6H HF22 H N N 107 O6H HF21 H N N 108 O6H HE1 H N N 109 O6H HE2 H N N 110 O6H HH2 H N N 111 O6H HH3 H N N 112 O6H HH1 H N N 113 O6H OXT O N N 114 O6H HXT H N N 115 OCA C1 C N N 116 OCA C2 C N N 117 OCA C3 C N N 118 OCA C4 C N N 119 OCA C5 C N N 120 OCA C6 C N N 121 OCA C7 C N N 122 OCA C8 C N N 123 OCA O1 O N N 124 OCA O2 O N N 125 OCA H21 H N N 126 OCA H22 H N N 127 OCA H31 H N N 128 OCA H32 H N N 129 OCA H41 H N N 130 OCA H42 H N N 131 OCA H51 H N N 132 OCA H52 H N N 133 OCA H61 H N N 134 OCA H62 H N N 135 OCA H71 H N N 136 OCA H72 H N N 137 OCA H81 H N N 138 OCA H82 H N N 139 OCA H83 H N N 140 OCA HO2 H N N 141 PHE N N N N 142 PHE CA C N S 143 PHE C C N N 144 PHE O O N N 145 PHE CB C N N 146 PHE CG C Y N 147 PHE CD1 C Y N 148 PHE CD2 C Y N 149 PHE CE1 C Y N 150 PHE CE2 C Y N 151 PHE CZ C Y N 152 PHE OXT O N N 153 PHE H H N N 154 PHE H2 H N N 155 PHE HA H N N 156 PHE HB2 H N N 157 PHE HB3 H N N 158 PHE HD1 H N N 159 PHE HD2 H N N 160 PHE HE1 H N N 161 PHE HE2 H N N 162 PHE HZ H N N 163 PHE HXT H N N 164 PRO N N N N 165 PRO CA C N S 166 PRO C C N N 167 PRO O O N N 168 PRO CB C N N 169 PRO CG C N N 170 PRO CD C N N 171 PRO OXT O N N 172 PRO H H N N 173 PRO HA H N N 174 PRO HB2 H N N 175 PRO HB3 H N N 176 PRO HG2 H N N 177 PRO HG3 H N N 178 PRO HD2 H N N 179 PRO HD3 H N N 180 PRO HXT H N N 181 SER N N N N 182 SER CA C N S 183 SER C C N N 184 SER O O N N 185 SER CB C N N 186 SER OG O N N 187 SER OXT O N N 188 SER H H N N 189 SER H2 H N N 190 SER HA H N N 191 SER HB2 H N N 192 SER HB3 H N N 193 SER HG H N N 194 SER HXT H N N 195 THR N N N N 196 THR CA C N S 197 THR C C N N 198 THR O O N N 199 THR CB C N R 200 THR OG1 O N N 201 THR CG2 C N N 202 THR OXT O N N 203 THR H H N N 204 THR H2 H N N 205 THR HA H N N 206 THR HB H N N 207 THR HG1 H N N 208 THR HG21 H N N 209 THR HG22 H N N 210 THR HG23 H N N 211 THR HXT H N N 212 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ASN N CA sing N N 1 ASN N H sing N N 2 ASN N H2 sing N N 3 ASN CA C sing N N 4 ASN CA CB sing N N 5 ASN CA HA sing N N 6 ASN C O doub N N 7 ASN C OXT sing N N 8 ASN CB CG sing N N 9 ASN CB HB2 sing N N 10 ASN CB HB3 sing N N 11 ASN CG OD1 doub N N 12 ASN CG ND2 sing N N 13 ASN ND2 HD21 sing N N 14 ASN ND2 HD22 sing N N 15 ASN OXT HXT sing N N 16 CYS N CA sing N N 17 CYS N H sing N N 18 CYS N H2 sing N N 19 CYS CA C sing N N 20 CYS CA CB sing N N 21 CYS CA HA sing N N 22 CYS C O doub N N 23 CYS C OXT sing N N 24 CYS CB SG sing N N 25 CYS CB HB2 sing N N 26 CYS CB HB3 sing N N 27 CYS SG HG sing N N 28 CYS OXT HXT sing N N 29 DTR N CA sing N N 30 DTR N H sing N N 31 DTR N H2 sing N N 32 DTR CA CB sing N N 33 DTR CA C sing N N 34 DTR CA HA sing N N 35 DTR CB CG sing N N 36 DTR CB HB2 sing N N 37 DTR CB HB3 sing N N 38 DTR CG CD1 doub Y N 39 DTR CG CD2 sing Y N 40 DTR CD1 NE1 sing Y N 41 DTR CD1 HD1 sing N N 42 DTR NE1 CE2 sing Y N 43 DTR NE1 HE1 sing N N 44 DTR CE2 CZ2 doub Y N 45 DTR CE2 CD2 sing Y N 46 DTR CZ2 CH2 sing Y N 47 DTR CZ2 HZ2 sing N N 48 DTR CH2 CZ3 doub Y N 49 DTR CH2 HH2 sing N N 50 DTR CZ3 CE3 sing Y N 51 DTR CZ3 HZ3 sing N N 52 DTR CE3 CD2 doub Y N 53 DTR CE3 HE3 sing N N 54 DTR C O doub N N 55 DTR C OXT sing N N 56 DTR OXT HXT sing N N 57 LYS N CA sing N N 58 LYS N H sing N N 59 LYS N H2 sing N N 60 LYS CA C sing N N 61 LYS CA CB sing N N 62 LYS CA HA sing N N 63 LYS C O doub N N 64 LYS C OXT sing N N 65 LYS CB CG sing N N 66 LYS CB HB2 sing N N 67 LYS CB HB3 sing N N 68 LYS CG CD sing N N 69 LYS CG HG2 sing N N 70 LYS CG HG3 sing N N 71 LYS CD CE sing N N 72 LYS CD HD2 sing N N 73 LYS CD HD3 sing N N 74 LYS CE NZ sing N N 75 LYS CE HE2 sing N N 76 LYS CE HE3 sing N N 77 LYS NZ HZ1 sing N N 78 LYS NZ HZ2 sing N N 79 LYS NZ HZ3 sing N N 80 LYS OXT HXT sing N N 81 O6H N CA sing N N 82 O6H C O doub N N 83 O6H C CA sing N N 84 O6H CA CB sing N N 85 O6H CF2 CD2 sing N N 86 O6H CB CG sing N N 87 O6H CD2 CG doub Y N 88 O6H CD2 CE2 sing Y N 89 O6H CG CD1 sing Y N 90 O6H CE2 CZ doub Y N 91 O6H CD1 CF1 sing N N 92 O6H CD1 CE1 doub Y N 93 O6H CZ CE1 sing Y N 94 O6H CZ CH sing N N 95 O6H N H sing N N 96 O6H N H2 sing N N 97 O6H CA HA sing N N 98 O6H CB HB1 sing N N 99 O6H CB HB2 sing N N 100 O6H CF1 HF11 sing N N 101 O6H CF1 HF12 sing N N 102 O6H CF1 HF13 sing N N 103 O6H CF2 HF23 sing N N 104 O6H CF2 HF22 sing N N 105 O6H CF2 HF21 sing N N 106 O6H CE1 HE1 sing N N 107 O6H CE2 HE2 sing N N 108 O6H CH HH2 sing N N 109 O6H CH HH3 sing N N 110 O6H CH HH1 sing N N 111 O6H C OXT sing N N 112 O6H OXT HXT sing N N 113 OCA C1 C2 sing N N 114 OCA C1 O1 doub N N 115 OCA C1 O2 sing N N 116 OCA C2 C3 sing N N 117 OCA C2 H21 sing N N 118 OCA C2 H22 sing N N 119 OCA C3 C4 sing N N 120 OCA C3 H31 sing N N 121 OCA C3 H32 sing N N 122 OCA C4 C5 sing N N 123 OCA C4 H41 sing N N 124 OCA C4 H42 sing N N 125 OCA C5 C6 sing N N 126 OCA C5 H51 sing N N 127 OCA C5 H52 sing N N 128 OCA C6 C7 sing N N 129 OCA C6 H61 sing N N 130 OCA C6 H62 sing N N 131 OCA C7 C8 sing N N 132 OCA C7 H71 sing N N 133 OCA C7 H72 sing N N 134 OCA C8 H81 sing N N 135 OCA C8 H82 sing N N 136 OCA C8 H83 sing N N 137 OCA O2 HO2 sing N N 138 PHE N CA sing N N 139 PHE N H sing N N 140 PHE N H2 sing N N 141 PHE CA C sing N N 142 PHE CA CB sing N N 143 PHE CA HA sing N N 144 PHE C O doub N N 145 PHE C OXT sing N N 146 PHE CB CG sing N N 147 PHE CB HB2 sing N N 148 PHE CB HB3 sing N N 149 PHE CG CD1 doub Y N 150 PHE CG CD2 sing Y N 151 PHE CD1 CE1 sing Y N 152 PHE CD1 HD1 sing N N 153 PHE CD2 CE2 doub Y N 154 PHE CD2 HD2 sing N N 155 PHE CE1 CZ doub Y N 156 PHE CE1 HE1 sing N N 157 PHE CE2 CZ sing Y N 158 PHE CE2 HE2 sing N N 159 PHE CZ HZ sing N N 160 PHE OXT HXT sing N N 161 PRO N CA sing N N 162 PRO N CD sing N N 163 PRO N H sing N N 164 PRO CA C sing N N 165 PRO CA CB sing N N 166 PRO CA HA sing N N 167 PRO C O doub N N 168 PRO C OXT sing N N 169 PRO CB CG sing N N 170 PRO CB HB2 sing N N 171 PRO CB HB3 sing N N 172 PRO CG CD sing N N 173 PRO CG HG2 sing N N 174 PRO CG HG3 sing N N 175 PRO CD HD2 sing N N 176 PRO CD HD3 sing N N 177 PRO OXT HXT sing N N 178 SER N CA sing N N 179 SER N H sing N N 180 SER N H2 sing N N 181 SER CA C sing N N 182 SER CA CB sing N N 183 SER CA HA sing N N 184 SER C O doub N N 185 SER C OXT sing N N 186 SER CB OG sing N N 187 SER CB HB2 sing N N 188 SER CB HB3 sing N N 189 SER OG HG sing N N 190 SER OXT HXT sing N N 191 THR N CA sing N N 192 THR N H sing N N 193 THR N H2 sing N N 194 THR CA C sing N N 195 THR CA CB sing N N 196 THR CA HA sing N N 197 THR C O doub N N 198 THR C OXT sing N N 199 THR CB OG1 sing N N 200 THR CB CG2 sing N N 201 THR CB HB sing N N 202 THR OG1 HG1 sing N N 203 THR CG2 HG21 sing N N 204 THR CG2 HG22 sing N N 205 THR CG2 HG23 sing N N 206 THR OXT HXT sing N N 207 # _pdbx_audit_support.funding_organization 'Ministry of Economy and Competitiveness (MINECO)' _pdbx_audit_support.country Spain _pdbx_audit_support.grant_number RTI2018-100700-B-100 _pdbx_audit_support.ordinal 1 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 6Y1Q _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ #