HEADER LIGASE 18-FEB-20 6Y3J TITLE RING-DTC DOMAINS OF DELTEX 2, BOUND TO ADP-RIBOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE E3 UBIQUITIN-PROTEIN LIGASE DTX2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN DELTEX-2,HDTX2,RING FINGER PROTEIN 58,RING-TYPE E3 COMPND 5 UBIQUITIN TRANSFERASE DTX2; COMPND 6 EC: 2.3.2.27; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DTX2, KIAA1528, RNF58; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS UBIQUITINATION, E3 RING LIGASE, UBIQUITIN, PAR-BINDING, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR M.GABRIELSSEN,L.BUETOW,D.T.HUANG REVDAT 3 24-JAN-24 6Y3J 1 REMARK REVDAT 2 30-SEP-20 6Y3J 1 JRNL REVDAT 1 02-SEP-20 6Y3J 0 JRNL AUTH S.F.AHMED,L.BUETOW,M.GABRIELSEN,S.LILLA,C.CHATRIN, JRNL AUTH 2 G.J.SIBBET,S.ZANIVAN,D.T.HUANG JRNL TITL DELTEX2 C-TERMINAL DOMAIN RECOGNIZES AND RECRUITS JRNL TITL 2 ADP-RIBOSYLATED PROTEINS FOR UBIQUITINATION. JRNL REF SCI ADV V. 6 2020 JRNL REFN ESSN 2375-2548 JRNL PMID 32937373 JRNL DOI 10.1126/SCIADV.ABC0629 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 27953 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.240 REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.660 REMARK 3 FREE R VALUE TEST SET COUNT : 1303 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.4400 - 5.4100 1.00 2994 145 0.1717 0.2001 REMARK 3 2 5.4000 - 4.2900 0.99 2940 171 0.1782 0.2224 REMARK 3 3 4.2900 - 3.7500 0.99 2962 131 0.1910 0.2542 REMARK 3 4 3.7500 - 3.4100 0.99 2938 184 0.2259 0.2980 REMARK 3 5 3.4100 - 3.1600 0.99 2939 164 0.2642 0.3118 REMARK 3 6 3.1600 - 2.9800 0.99 2966 109 0.2940 0.3527 REMARK 3 7 2.9800 - 2.8300 0.98 3011 121 0.3542 0.4000 REMARK 3 8 2.8300 - 2.7000 0.99 2997 106 0.3958 0.4104 REMARK 3 9 2.7000 - 2.6000 0.99 2903 172 0.4172 0.4506 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.540 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 38.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.61 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 36.2615 37.5413 27.1934 REMARK 3 T TENSOR REMARK 3 T11: 0.4806 T22: 0.7660 REMARK 3 T33: 0.2504 T12: 0.2311 REMARK 3 T13: -0.0061 T23: 0.0624 REMARK 3 L TENSOR REMARK 3 L11: 0.9238 L22: 0.7814 REMARK 3 L33: 0.2505 L12: -0.3855 REMARK 3 L13: 0.3842 L23: -0.0714 REMARK 3 S TENSOR REMARK 3 S11: 0.0894 S12: 0.1362 S13: -0.0040 REMARK 3 S21: 0.0696 S22: 0.0185 S23: 0.0542 REMARK 3 S31: -0.6381 S32: -0.8197 S33: -0.0197 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Y3J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1292106797. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27953 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 90.870 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.300 REMARK 200 R MERGE (I) : 0.27000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.61800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6Y22 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MORPHEUS CONDITION 39 (MOLECULAR REMARK 280 DIMENSIONS), PH 7.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.69600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 24.84800 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 24.84800 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 49.69600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 388 REMARK 465 SER A 389 REMARK 465 ASP A 617 REMARK 465 CYS A 618 REMARK 465 LEU A 619 REMARK 465 GLU A 620 REMARK 465 GLN A 621 REMARK 465 GLN A 622 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 390 CG CD OE1 OE2 REMARK 470 GLU A 394 CG CD OE1 OE2 REMARK 470 LYS A 398 CG CD CE NZ REMARK 470 LYS A 405 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 521 C PRO A 522 N 0.153 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 522 C - N - CA ANGL. DEV. = 13.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 450 109.99 -56.22 REMARK 500 LEU A 451 -17.42 -49.75 REMARK 500 LYS A 463 65.49 -109.10 REMARK 500 THR A 482 57.79 -96.86 REMARK 500 HIS A 500 51.24 -141.40 REMARK 500 ASN A 542 -141.92 -102.47 REMARK 500 ASP A 598 93.05 -162.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 703 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 412 SG REMARK 620 2 CYS A 415 SG 98.4 REMARK 620 3 HIS A 450 ND1 90.8 89.7 REMARK 620 4 CYS A 453 SG 118.6 114.9 136.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 702 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 445 SG REMARK 620 2 HIS A 447 ND1 125.5 REMARK 620 3 CYS A 469 SG 97.1 120.9 REMARK 620 4 CYS A 472 SG 93.1 117.9 95.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue APR A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 703 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6Y2X RELATED DB: PDB REMARK 900 APO REMARK 900 RELATED ID: 6Y22 RELATED DB: PDB REMARK 900 APO DBREF 6Y3J A 390 622 UNP Q86UW9 DTX2_HUMAN 390 622 SEQADV 6Y3J GLY A 388 UNP Q86UW9 EXPRESSION TAG SEQADV 6Y3J SER A 389 UNP Q86UW9 EXPRESSION TAG SEQRES 1 A 235 GLY SER GLU PRO GLU PRO GLU GLN VAL ILE LYS ASN TYR SEQRES 2 A 235 THR GLU GLU LEU LYS VAL PRO PRO ASP GLU ASP CYS ILE SEQRES 3 A 235 ILE CYS MET GLU LYS LEU SER THR ALA SER GLY TYR SER SEQRES 4 A 235 ASP VAL THR ASP SER LYS ALA ILE GLY SER LEU ALA VAL SEQRES 5 A 235 GLY HIS LEU THR LYS CYS SER HIS ALA PHE HIS LEU LEU SEQRES 6 A 235 CYS LEU LEU ALA MET TYR CYS ASN GLY ASN LYS ASP GLY SEQRES 7 A 235 SER LEU GLN CYS PRO SER CYS LYS THR ILE TYR GLY GLU SEQRES 8 A 235 LYS THR GLY THR GLN PRO GLN GLY LYS MET GLU VAL LEU SEQRES 9 A 235 ARG PHE GLN MET SER LEU PRO GLY HIS GLU ASP CYS GLY SEQRES 10 A 235 THR ILE LEU ILE VAL TYR SER ILE PRO HIS GLY ILE GLN SEQRES 11 A 235 GLY PRO GLU HIS PRO ASN PRO GLY LYS PRO PHE THR ALA SEQRES 12 A 235 ARG GLY PHE PRO ARG GLN CYS TYR LEU PRO ASP ASN ALA SEQRES 13 A 235 GLN GLY ARG LYS VAL LEU GLU LEU LEU LYS VAL ALA TRP SEQRES 14 A 235 LYS ARG ARG LEU ILE PHE THR VAL GLY THR SER SER THR SEQRES 15 A 235 THR GLY GLU THR ASP THR VAL VAL TRP ASN GLU ILE HIS SEQRES 16 A 235 HIS LYS THR GLU MET ASP ARG ASN ILE THR GLY HIS GLY SEQRES 17 A 235 TYR PRO ASP PRO ASN TYR LEU GLN ASN VAL LEU ALA GLU SEQRES 18 A 235 LEU ALA ALA GLN GLY VAL THR GLU ASP CYS LEU GLU GLN SEQRES 19 A 235 GLN HET APR A 701 36 HET ZN A 702 1 HET ZN A 703 1 HETNAM APR ADENOSINE-5-DIPHOSPHORIBOSE HETNAM ZN ZINC ION FORMUL 2 APR C15 H23 N5 O14 P2 FORMUL 3 ZN 2(ZN 2+) FORMUL 5 HOH *15(H2 O) HELIX 1 AA1 GLU A 392 ASN A 399 1 8 HELIX 2 AA2 LEU A 451 GLY A 461 1 11 HELIX 3 AA3 ASN A 542 ARG A 558 1 17 HELIX 4 AA4 ASN A 600 LEU A 609 1 10 HELIX 5 AA5 ALA A 610 GLY A 613 5 4 SHEET 1 AA1 3 GLU A 402 GLU A 403 0 SHEET 2 AA1 3 VAL A 439 HIS A 441 -1 O HIS A 441 N GLU A 402 SHEET 3 AA1 3 ALA A 448 HIS A 450 -1 O PHE A 449 N GLY A 440 SHEET 1 AA2 2 ASP A 411 CYS A 412 0 SHEET 2 AA2 2 GLU A 417 LYS A 418 -1 O GLU A 417 N CYS A 412 SHEET 1 AA3 2 LEU A 467 GLN A 468 0 SHEET 2 AA3 2 ILE A 475 TYR A 476 -1 O TYR A 476 N LEU A 467 SHEET 1 AA4 3 LYS A 487 PHE A 493 0 SHEET 2 AA4 3 THR A 505 SER A 511 -1 O LEU A 507 N LEU A 491 SHEET 3 AA4 3 ARG A 535 PRO A 540 -1 O CYS A 537 N ILE A 508 SHEET 1 AA5 2 GLY A 515 ILE A 516 0 SHEET 2 AA5 2 PRO A 527 PHE A 528 -1 O PHE A 528 N GLY A 515 SHEET 1 AA6 2 PHE A 562 GLY A 565 0 SHEET 2 AA6 2 THR A 575 TRP A 578 -1 O VAL A 577 N THR A 563 LINK SG CYS A 412 ZN ZN A 703 1555 1555 2.33 LINK SG CYS A 415 ZN ZN A 703 1555 1555 2.27 LINK SG CYS A 445 ZN ZN A 702 1555 1555 2.40 LINK ND1 HIS A 447 ZN ZN A 702 1555 1555 1.91 LINK ND1 HIS A 450 ZN ZN A 703 1555 1555 2.20 LINK SG CYS A 453 ZN ZN A 703 1555 1555 2.07 LINK SG CYS A 469 ZN ZN A 702 1555 1555 2.36 LINK SG CYS A 472 ZN ZN A 702 1555 1555 2.59 CISPEP 1 PHE A 533 PRO A 534 0 0.72 CISPEP 2 TYR A 596 PRO A 597 0 -1.05 SITE 1 AC1 10 ARG A 535 SER A 567 SER A 568 THR A 569 SITE 2 AC1 10 VAL A 577 TRP A 578 HIS A 582 HIS A 583 SITE 3 AC1 10 THR A 585 HIS A 594 SITE 1 AC2 5 CYS A 445 HIS A 447 CYS A 469 SER A 471 SITE 2 AC2 5 CYS A 472 SITE 1 AC3 4 CYS A 412 CYS A 415 HIS A 450 CYS A 453 CRYST1 104.933 104.933 74.544 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009530 0.005502 0.000000 0.00000 SCALE2 0.000000 0.011004 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013415 0.00000