HEADER IMMUNE SYSTEM 19-FEB-20 6Y49 TITLE CRYSTAL STRUCTURE OF THE PARAOXON-MODIFIED A.17KAPPA ANTIBODY FAB TITLE 2 FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: A.17KAPPA ANTIBODY FAB FRAGMENT - HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: A.17KAPPA ANTIBODY FAB FRAGMENT - LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: KOMAGATAELLA PHAFFII GS115; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 644223; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: KOMAGATAELLA PHAFFII GS115; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 644223 KEYWDS QM/MM COMPUTATION; DESIGNED BIOCATALYSTS; BIOSCAVENGERS; PHOSPHORYL KEYWDS 2 TRANSFER; ORGANOPHOSPHORUS AGENTS, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR S.CHATZIEFTHIMIOU,Y.MOKRUSHINA,I.SMIRNOV,A.GABIBOV,M.WILMANNS REVDAT 2 30-SEP-20 6Y49 1 JRNL REVDAT 1 16-SEP-20 6Y49 0 JRNL AUTH Y.A.MOKRUSHINA,A.V.GOLOVIN,I.V.SMIRNOV,S.D.CHATZIEFTHIMIOU, JRNL AUTH 2 A.V.STEPANOVA,T.V.BOBIK,A.O.ZALEVSKY,A.S.ZLOBIN, JRNL AUTH 3 K.A.KONOVALOV,S.S.TEREKHOV,A.V.STEPANOV,S.O.PIPIYA, JRNL AUTH 4 O.G.SHAMBORANT,E.ROUND,A.A.BELOGUROV JR.,G.BOURENKOV, JRNL AUTH 5 A.A.MAKAROV,M.WILMANNS,J.XIE,G.M.BLACKBURN,A.G.GABIBOV, JRNL AUTH 6 R.A.LERNER JRNL TITL MULTISCALE COMPUTATION DELIVERS ORGANOPHOSPHORUS REACTIVITY JRNL TITL 2 AND STEREOSELECTIVITY TO IMMUNOGLOBULIN SCAVENGERS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 117 22841 2020 JRNL REFN ESSN 1091-6490 JRNL PMID 32859757 JRNL DOI 10.1073/PNAS.2010317117 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 51836 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2627 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.3077 - 4.3947 0.98 2645 146 0.1472 0.1709 REMARK 3 2 4.3947 - 3.4915 0.99 2625 127 0.1488 0.1564 REMARK 3 3 3.4915 - 3.0511 0.99 2595 153 0.1722 0.2142 REMARK 3 4 3.0511 - 2.7726 0.99 2602 150 0.1849 0.2307 REMARK 3 5 2.7726 - 2.5741 0.99 2600 151 0.1849 0.2349 REMARK 3 6 2.5741 - 2.4225 0.99 2613 133 0.1803 0.2428 REMARK 3 7 2.4225 - 2.3013 0.98 2543 152 0.1797 0.1778 REMARK 3 8 2.3013 - 2.2011 0.98 2584 133 0.1835 0.2255 REMARK 3 9 2.2011 - 2.1165 0.98 2585 140 0.1784 0.2699 REMARK 3 10 2.1165 - 2.0435 0.99 2582 139 0.1878 0.2621 REMARK 3 11 2.0435 - 1.9796 0.98 2584 134 0.1928 0.2164 REMARK 3 12 1.9796 - 1.9230 0.99 2566 135 0.2092 0.2977 REMARK 3 13 1.9230 - 1.8724 0.99 2591 134 0.2178 0.2779 REMARK 3 14 1.8724 - 1.8268 0.99 2606 147 0.2151 0.2364 REMARK 3 15 1.8268 - 1.7853 0.99 2572 143 0.2314 0.2975 REMARK 3 16 1.7853 - 1.7473 0.99 2581 118 0.2394 0.2691 REMARK 3 17 1.7473 - 1.7123 0.99 2596 134 0.2515 0.3069 REMARK 3 18 1.7123 - 1.6800 0.99 2580 127 0.2911 0.2834 REMARK 3 19 1.6800 - 1.6500 0.98 2559 131 0.3016 0.3921 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3354 REMARK 3 ANGLE : 1.118 4595 REMARK 3 CHIRALITY : 0.069 520 REMARK 3 PLANARITY : 0.007 589 REMARK 3 DIHEDRAL : 3.174 2685 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN H AND RESID 2:117) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5280 -2.9583 -1.7652 REMARK 3 T TENSOR REMARK 3 T11: 0.2420 T22: 0.3414 REMARK 3 T33: 0.2560 T12: -0.0155 REMARK 3 T13: 0.0597 T23: -0.0573 REMARK 3 L TENSOR REMARK 3 L11: 3.0424 L22: 2.3032 REMARK 3 L33: 4.7151 L12: -0.0420 REMARK 3 L13: 1.1146 L23: -0.4896 REMARK 3 S TENSOR REMARK 3 S11: 0.0264 S12: 0.2730 S13: -0.3733 REMARK 3 S21: -0.2010 S22: -0.1778 S23: 0.0069 REMARK 3 S31: 0.4686 S32: -0.2053 S33: 0.1151 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN H AND RESID 118:222) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4181 -7.7555 27.3113 REMARK 3 T TENSOR REMARK 3 T11: 0.1554 T22: 0.0980 REMARK 3 T33: 0.1558 T12: -0.0152 REMARK 3 T13: 0.0003 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 2.4334 L22: 2.4950 REMARK 3 L33: 4.2334 L12: 0.7458 REMARK 3 L13: -0.7720 L23: -2.0337 REMARK 3 S TENSOR REMARK 3 S11: 0.0176 S12: -0.1102 S13: -0.0532 REMARK 3 S21: 0.1078 S22: -0.0428 S23: 0.0243 REMARK 3 S31: 0.1024 S32: 0.0431 S33: 0.0371 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN L AND RESID 2:107) REMARK 3 ORIGIN FOR THE GROUP (A): -17.2415 4.7143 9.8679 REMARK 3 T TENSOR REMARK 3 T11: 0.1599 T22: 0.2080 REMARK 3 T33: 0.2344 T12: 0.0206 REMARK 3 T13: 0.0371 T23: -0.0263 REMARK 3 L TENSOR REMARK 3 L11: 3.5905 L22: 1.3549 REMARK 3 L33: 5.2585 L12: -0.0330 REMARK 3 L13: -1.3418 L23: -1.1123 REMARK 3 S TENSOR REMARK 3 S11: 0.1257 S12: 0.2830 S13: 0.1348 REMARK 3 S21: -0.0026 S22: 0.0266 S23: 0.1175 REMARK 3 S31: -0.1634 S32: -0.0139 S33: -0.1544 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN L AND RESID 108:216) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9159 4.5696 37.1232 REMARK 3 T TENSOR REMARK 3 T11: 0.2053 T22: 0.1530 REMARK 3 T33: 0.1681 T12: 0.0016 REMARK 3 T13: 0.0075 T23: -0.0130 REMARK 3 L TENSOR REMARK 3 L11: 5.3500 L22: 0.7604 REMARK 3 L33: 1.7684 L12: -0.0447 REMARK 3 L13: 1.4035 L23: -0.1290 REMARK 3 S TENSOR REMARK 3 S11: -0.0777 S12: -0.2634 S13: 0.0691 REMARK 3 S21: 0.1328 S22: 0.0510 S23: 0.0424 REMARK 3 S31: -0.0172 S32: -0.1614 S33: 0.0146 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Y49 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1292102473. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97631 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 69683 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.480 REMARK 200 RESOLUTION RANGE LOW (A) : 67.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15M K/NA TARTRATE 23% PEG 3350, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.52150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN H 1 REMARK 465 GLN H 101 REMARK 465 SER H 102 REMARK 465 SER H 103 REMARK 465 HIS H 104 REMARK 465 LYS H 135 REMARK 465 SER H 136 REMARK 465 THR H 137 REMARK 465 SER H 138 REMARK 465 LEU H 223 REMARK 465 ALA H 224 REMARK 465 MET H 225 REMARK 465 ASP H 226 REMARK 465 TYR H 227 REMARK 465 LYS H 228 REMARK 465 ASP H 229 REMARK 465 HIS H 230 REMARK 465 ASP H 231 REMARK 465 GLY H 232 REMARK 465 ASP H 233 REMARK 465 TYR H 234 REMARK 465 LYS H 235 REMARK 465 ASP H 236 REMARK 465 HIS H 237 REMARK 465 ASP H 238 REMARK 465 ILE H 239 REMARK 465 ASP H 240 REMARK 465 TYR H 241 REMARK 465 LYS H 242 REMARK 465 ASP H 243 REMARK 465 ASP H 244 REMARK 465 ASP H 245 REMARK 465 ASP H 246 REMARK 465 LYS H 247 REMARK 465 VAL H 248 REMARK 465 ASP H 249 REMARK 465 HIS H 250 REMARK 465 HIS H 251 REMARK 465 HIS H 252 REMARK 465 HIS H 253 REMARK 465 HIS H 254 REMARK 465 HIS H 255 REMARK 465 GLN L 1 REMARK 465 SER L 2 REMARK 465 VAL L 3 REMARK 465 ILE L 217 REMARK 465 ASP L 218 REMARK 465 ALA L 219 REMARK 465 ALA L 220 REMARK 465 ALA L 221 REMARK 465 ALA L 222 REMARK 465 ALA L 223 REMARK 465 SER L 224 REMARK 465 PHE L 225 REMARK 465 LEU L 226 REMARK 465 GLU L 227 REMARK 465 GLN L 228 REMARK 465 LYS L 229 REMARK 465 LEU L 230 REMARK 465 ILE L 231 REMARK 465 SER L 232 REMARK 465 GLU L 233 REMARK 465 GLU L 234 REMARK 465 ASP L 235 REMARK 465 LEU L 236 REMARK 465 ASN L 237 REMARK 465 SER L 238 REMARK 465 ALA L 239 REMARK 465 VAL L 240 REMARK 465 ASP L 241 REMARK 465 HIS L 242 REMARK 465 HIS L 243 REMARK 465 HIS L 244 REMARK 465 HIS L 245 REMARK 465 HIS L 246 REMARK 465 HIS L 247 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS H 146 CA - CB - SG ANGL. DEV. = 8.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER H 15 -7.53 79.35 REMARK 500 ASP H 106 103.35 -165.27 REMARK 500 SER H 133 -160.03 -173.38 REMARK 500 ASN L 28 -89.65 -111.24 REMARK 500 ASN L 52 -42.26 75.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DEP L 301 DBREF 6Y49 H 1 255 PDB 6Y49 6Y49 1 255 DBREF 6Y49 L 1 247 PDB 6Y49 6Y49 1 247 SEQRES 1 H 255 GLN VAL GLN LEU GLN GLU SER GLY PRO GLY LEU VAL LYS SEQRES 2 H 255 PRO SER GLU THR LEU SER LEU THR CYS ALA VAL SER GLY SEQRES 3 H 255 TYR SER ILE SER SER GLY TYR TYR TRP GLY TRP ILE ARG SEQRES 4 H 255 GLN PRO PRO GLY LYS GLY LEU GLU TRP ILE GLY SER ILE SEQRES 5 H 255 TYR HIS SER GLY SER THR TYR TYR ASN PRO SER LEU LYS SEQRES 6 H 255 SER ARG VAL THR ILE SER VAL ASP THR SER LYS ASN GLN SEQRES 7 H 255 PHE SER LEU LYS LEU SER SER VAL THR ALA ALA ASP THR SEQRES 8 H 255 ALA VAL TYR TYR CYS ALA GLY LEU THR GLN SER SER HIS SEQRES 9 H 255 ASN ASP ALA ASN TRP GLY GLN GLY THR LEU VAL THR VAL SEQRES 10 H 255 SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU SEQRES 11 H 255 ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA SEQRES 12 H 255 LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL SEQRES 13 H 255 THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL SEQRES 14 H 255 HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SEQRES 15 H 255 SER LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU SEQRES 16 H 255 GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SEQRES 17 H 255 SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER SEQRES 18 H 255 CYS LEU ALA MET ASP TYR LYS ASP HIS ASP GLY ASP TYR SEQRES 19 H 255 LYS ASP HIS ASP ILE ASP TYR LYS ASP ASP ASP ASP LYS SEQRES 20 H 255 VAL ASP HIS HIS HIS HIS HIS HIS SEQRES 1 L 247 GLN SER VAL LEU THR GLN PRO PRO SER VAL SER ALA ALA SEQRES 2 L 247 PRO GLY GLN LYS VAL THR ILE SER CYS SER GLY SER SER SEQRES 3 L 247 SER ASN ILE GLY ASN ASN TYR VAL SER TRP TYR GLN GLN SEQRES 4 L 247 LEU PRO GLY THR ALA PRO LYS LEU LEU ILE TYR ASP ASN SEQRES 5 L 247 ASN LYS ARG PRO SER GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 L 247 SER LYS SER GLY THR SER ALA THR LEU GLY ILE THR GLY SEQRES 7 L 247 LEU GLN THR GLY ASP GLU ALA ASP TYR TYR CYS GLY THR SEQRES 8 L 247 TRP ASP SER SER LEU ASN PRO VAL PHE GLY GLY GLY THR SEQRES 9 L 247 LYS LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL SEQRES 10 L 247 PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY SEQRES 11 L 247 THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO SEQRES 12 L 247 ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU SEQRES 13 L 247 GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SEQRES 14 L 247 SER LYS ASP SER THR TYR SER LEU SER SER THR LEU THR SEQRES 15 L 247 LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA SEQRES 16 L 247 CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR SEQRES 17 L 247 LYS SER PHE ASN ARG GLY GLU CYS ILE ASP ALA ALA ALA SEQRES 18 L 247 ALA ALA SER PHE LEU GLU GLN LYS LEU ILE SER GLU GLU SEQRES 19 L 247 ASP LEU ASN SER ALA VAL ASP HIS HIS HIS HIS HIS HIS HET DEP L 301 8 HETNAM DEP DIETHYL PHOSPHONATE FORMUL 3 DEP C4 H11 O3 P FORMUL 4 HOH *412(H2 O) HELIX 1 AA1 SER H 28 GLY H 32 5 5 HELIX 2 AA2 LEU H 64 SER H 66 5 3 HELIX 3 AA3 THR H 87 THR H 91 5 5 HELIX 4 AA4 SER H 162 ALA H 164 5 3 HELIX 5 AA5 SER H 193 LEU H 195 5 3 HELIX 6 AA6 LYS H 207 ASN H 210 5 4 HELIX 7 AA7 SER L 123 SER L 129 1 7 HELIX 8 AA8 LYS L 185 GLU L 189 1 5 SHEET 1 AA1 4 GLN H 3 SER H 7 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 AA1 4 GLN H 78 LEU H 83 -1 O PHE H 79 N CYS H 22 SHEET 4 AA1 4 VAL H 68 ASP H 73 -1 N ASP H 73 O GLN H 78 SHEET 1 AA2 6 LEU H 11 VAL H 12 0 SHEET 2 AA2 6 THR H 113 VAL H 117 1 O THR H 116 N VAL H 12 SHEET 3 AA2 6 ALA H 92 LEU H 99 -1 N TYR H 94 O THR H 113 SHEET 4 AA2 6 TYR H 34 GLN H 40 -1 N ILE H 38 O TYR H 95 SHEET 5 AA2 6 GLU H 47 TYR H 53 -1 O ILE H 49 N TRP H 37 SHEET 6 AA2 6 THR H 58 TYR H 60 -1 O TYR H 59 N SER H 51 SHEET 1 AA3 4 LEU H 11 VAL H 12 0 SHEET 2 AA3 4 THR H 113 VAL H 117 1 O THR H 116 N VAL H 12 SHEET 3 AA3 4 ALA H 92 LEU H 99 -1 N TYR H 94 O THR H 113 SHEET 4 AA3 4 ASN H 108 TRP H 109 -1 O ASN H 108 N GLY H 98 SHEET 1 AA4 4 SER H 126 LEU H 130 0 SHEET 2 AA4 4 THR H 141 TYR H 151 -1 O LYS H 149 N SER H 126 SHEET 3 AA4 4 TYR H 182 PRO H 191 -1 O LEU H 184 N VAL H 148 SHEET 4 AA4 4 VAL H 169 THR H 171 -1 N HIS H 170 O VAL H 187 SHEET 1 AA5 4 SER H 126 LEU H 130 0 SHEET 2 AA5 4 THR H 141 TYR H 151 -1 O LYS H 149 N SER H 126 SHEET 3 AA5 4 TYR H 182 PRO H 191 -1 O LEU H 184 N VAL H 148 SHEET 4 AA5 4 VAL H 175 LEU H 176 -1 N VAL H 175 O SER H 183 SHEET 1 AA6 3 THR H 157 TRP H 160 0 SHEET 2 AA6 3 ILE H 201 HIS H 206 -1 O ASN H 203 N SER H 159 SHEET 3 AA6 3 THR H 211 LYS H 216 -1 O VAL H 213 N VAL H 204 SHEET 1 AA7 5 SER L 9 ALA L 12 0 SHEET 2 AA7 5 THR L 104 ILE L 108 1 O GLU L 107 N VAL L 10 SHEET 3 AA7 5 ASP L 86 TRP L 92 -1 N TYR L 87 O THR L 104 SHEET 4 AA7 5 SER L 35 GLN L 39 -1 N SER L 35 O GLY L 90 SHEET 5 AA7 5 LYS L 46 ILE L 49 -1 O LEU L 48 N TRP L 36 SHEET 1 AA8 4 SER L 9 ALA L 12 0 SHEET 2 AA8 4 THR L 104 ILE L 108 1 O GLU L 107 N VAL L 10 SHEET 3 AA8 4 ASP L 86 TRP L 92 -1 N TYR L 87 O THR L 104 SHEET 4 AA8 4 PRO L 98 PHE L 100 -1 O VAL L 99 N THR L 91 SHEET 1 AA9 3 VAL L 18 SER L 23 0 SHEET 2 AA9 3 SER L 71 ILE L 76 -1 O ALA L 72 N CYS L 22 SHEET 3 AA9 3 PHE L 63 SER L 68 -1 N SER L 68 O SER L 71 SHEET 1 AB1 4 SER L 116 PHE L 120 0 SHEET 2 AB1 4 THR L 131 PHE L 141 -1 O ASN L 139 N SER L 116 SHEET 3 AB1 4 TYR L 175 SER L 184 -1 O LEU L 177 N LEU L 138 SHEET 4 AB1 4 SER L 161 VAL L 165 -1 N GLN L 162 O THR L 180 SHEET 1 AB2 4 ALA L 155 LEU L 156 0 SHEET 2 AB2 4 LYS L 147 VAL L 152 -1 N VAL L 152 O ALA L 155 SHEET 3 AB2 4 VAL L 193 THR L 199 -1 O ALA L 195 N LYS L 151 SHEET 4 AB2 4 VAL L 207 ASN L 212 -1 O VAL L 207 N VAL L 198 SSBOND 1 CYS H 22 CYS H 96 1555 1555 2.06 SSBOND 2 CYS H 146 CYS H 202 1555 1555 2.00 SSBOND 3 CYS H 222 CYS L 216 1555 1555 2.04 SSBOND 4 CYS L 22 CYS L 89 1555 1555 2.05 SSBOND 5 CYS L 136 CYS L 196 1555 1555 2.01 LINK OH TYR L 37 P DEP L 301 1555 1555 1.51 CISPEP 1 PHE H 152 PRO H 153 0 -7.09 CISPEP 2 GLU H 154 PRO H 155 0 -0.67 CISPEP 3 TYR L 142 PRO L 143 0 1.40 SITE 1 AC1 5 TYR L 37 THR L 91 TRP L 92 PRO L 98 SITE 2 AC1 5 HOH L 402 CRYST1 52.437 67.043 65.985 90.00 107.37 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019071 0.000000 0.005966 0.00000 SCALE2 0.000000 0.014916 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015879 0.00000