HEADER HYDROLASE 27-FEB-20 6Y6U TITLE STRUCTURE OF PSEUDOMONAS AERUGINOSA PENICILLIN-BINDING PROTEIN 3 TITLE 2 (PBP3) IN COMPLEX WITH COMPOUND 6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDOGLYCAN D,D-TRANSPEPTIDASE FTSI; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PENICILLIN-BINDING PROTEIN 3,PBP-3; COMPND 5 EC: 3.4.16.4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN ATCC 15692 / DSM SOURCE 3 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SOURCE 4 ORGANISM_TAXID: 208964; SOURCE 5 GENE: FTSI, PBPB, PA4418; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PBP3, PENICILLIN BINDING PROTEINS, PEPTIDOGLYCAN PRODUCTION, KEYWDS 2 TRANSPEPTIDATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.NEWMAN,D.BELLINI,C.G.DOWSON REVDAT 3 24-JAN-24 6Y6U 1 REMARK REVDAT 2 03-FEB-21 6Y6U 1 JRNL REVDAT 1 24-JUN-20 6Y6U 0 JRNL AUTH S.L.KIDD,E.FOWLER,T.REINHARDT,T.COMPTON,N.MATEU,H.NEWMAN, JRNL AUTH 2 D.BELLINI,R.TALON,J.MCLOUGHLIN,T.KROJER,A.AIMON,A.BRADLEY, JRNL AUTH 3 M.FAIRHEAD,P.BREAR,L.DIAZ-SAEZ,K.MCAULEY,H.F.SORE,A.MADIN, JRNL AUTH 4 D.H.O'DONOVAN,K.V.M.HUBER,M.HYVONEN,C.G.DOWSON,D.R.SPRING JRNL TITL DEMONSTRATION OF THE UTILITY OF DOS-DERIVED FRAGMENT JRNL TITL 2 LIBRARIES FOR RAPID HIT DERIVATISATION IN A MULTIDIRECTIONAL JRNL TITL 3 FASHION JRNL REF CHEM SCI V. 11 10792 2020 JRNL REFN ESSN 2041-6539 JRNL DOI 10.1039/D0SC01232G REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.09 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 75.6 REMARK 3 NUMBER OF REFLECTIONS : 53940 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2775 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 285 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 5.50 REMARK 3 BIN R VALUE (WORKING SET) : 0.3410 REMARK 3 BIN FREE R VALUE SET COUNT : 17 REMARK 3 BIN FREE R VALUE : 0.2750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3763 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 348 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -9.38000 REMARK 3 B22 (A**2) : 5.94000 REMARK 3 B33 (A**2) : 3.44000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.140 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.111 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.137 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.417 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.975 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3955 ; 0.011 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3798 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5377 ; 1.674 ; 1.652 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8790 ; 1.389 ; 1.579 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 514 ; 7.106 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 206 ;28.795 ;20.922 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 661 ;14.911 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 37 ;17.546 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 515 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4463 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 831 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 7753 ;18.828 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6Y6U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1292106986. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : SILICON REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20171111 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.32 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56715 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 61.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 64.7 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : 1.17900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: 6HZR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% (W/V) POLYETHYLENE GLYCOL 3 350, REMARK 280 0.1 M BIS-TRIS PROPANE PH 7.8 AND 1% (W/V) PROTAMINE SULPHATE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.28400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.03150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.56400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.03150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.28400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.56400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 43 REMARK 465 PRO A 44 REMARK 465 GLY A 45 REMARK 465 TYR A 46 REMARK 465 GLN A 47 REMARK 465 ARG A 489 REMARK 465 LYS A 490 REMARK 465 VAL A 491 REMARK 465 SER A 492 REMARK 465 VAL A 493 REMARK 465 GLY A 494 REMARK 465 THR A 495 REMARK 465 LYS A 496 REMARK 465 GLY A 497 REMARK 465 TYR A 498 REMARK 465 ARG A 499 REMARK 465 GLU A 500 REMARK 465 ASN A 501 REMARK 465 ALA A 502 REMARK 465 ALA A 530 REMARK 465 GLY A 531 REMARK 465 TYR A 532 REMARK 465 PHE A 533 REMARK 465 GLY A 534 REMARK 465 LEU A 560 REMARK 465 PRO A 561 REMARK 465 THR A 562 REMARK 465 ALA A 563 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 184 CD GLU A 184 OE1 0.108 REMARK 500 GLU A 184 CD GLU A 184 OE2 0.090 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 272 82.85 -150.88 REMARK 500 PRO A 320 37.37 -93.54 REMARK 500 ARG A 338 -86.88 -121.57 REMARK 500 ASN A 427 40.54 -86.70 REMARK 500 SER A 528 78.05 -117.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2635 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A2636 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A2637 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH A2638 DISTANCE = 6.12 ANGSTROMS REMARK 525 HOH A2639 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH A2640 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH A2641 DISTANCE = 6.45 ANGSTROMS REMARK 525 HOH A2642 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH A2643 DISTANCE = 6.58 ANGSTROMS REMARK 525 HOH A2644 DISTANCE = 6.84 ANGSTROMS REMARK 525 HOH A2645 DISTANCE = 7.03 ANGSTROMS REMARK 525 HOH A2646 DISTANCE = 7.29 ANGSTROMS REMARK 525 HOH A2647 DISTANCE = 7.46 ANGSTROMS REMARK 525 HOH A2648 DISTANCE = 7.81 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 2201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 2202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 2203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ODZ A 2204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 2205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 2206 DBREF 6Y6U A 50 563 UNP G3XD46 FTSI_PSEAE 50 563 SEQADV 6Y6U GLY A 43 UNP G3XD46 EXPRESSION TAG SEQADV 6Y6U PRO A 44 UNP G3XD46 EXPRESSION TAG SEQADV 6Y6U GLY A 45 UNP G3XD46 EXPRESSION TAG SEQADV 6Y6U TYR A 46 UNP G3XD46 EXPRESSION TAG SEQADV 6Y6U GLN A 47 UNP G3XD46 EXPRESSION TAG SEQADV 6Y6U ASP A 48 UNP G3XD46 EXPRESSION TAG SEQADV 6Y6U PRO A 49 UNP G3XD46 EXPRESSION TAG SEQRES 1 A 521 GLY PRO GLY TYR GLN ASP PRO ALA ARG SER VAL ARG HIS SEQRES 2 A 521 ILE ALA ILE PRO ALA HIS ARG GLY LEU ILE THR ASP ARG SEQRES 3 A 521 ASN GLY GLU PRO LEU ALA VAL SER THR PRO VAL THR THR SEQRES 4 A 521 LEU TRP ALA ASN PRO LYS GLU LEU MET THR ALA LYS GLU SEQRES 5 A 521 ARG TRP PRO GLN LEU ALA ALA ALA LEU GLY GLN ASP THR SEQRES 6 A 521 LYS LEU PHE ALA ASP ARG ILE GLU GLN ASN ALA GLU ARG SEQRES 7 A 521 GLU PHE ILE TYR LEU VAL ARG GLY LEU THR PRO GLU GLN SEQRES 8 A 521 GLY GLU GLY VAL ILE ALA LEU LYS VAL PRO GLY VAL TYR SEQRES 9 A 521 SER ILE GLU GLU PHE ARG ARG PHE TYR PRO ALA GLY GLU SEQRES 10 A 521 VAL VAL ALA HIS ALA VAL GLY PHE THR ASP VAL ASP ASP SEQRES 11 A 521 ARG GLY ARG GLU GLY ILE GLU LEU ALA PHE ASP GLU TRP SEQRES 12 A 521 LEU ALA GLY VAL PRO GLY LYS ARG GLN VAL LEU LYS ASP SEQRES 13 A 521 ARG ARG GLY ARG VAL ILE LYS ASP VAL GLN VAL THR LYS SEQRES 14 A 521 ASN ALA LYS PRO GLY LYS THR LEU ALA LEU SER ILE ASP SEQRES 15 A 521 LEU ARG LEU GLN TYR LEU ALA HIS ARG GLU LEU ARG ASN SEQRES 16 A 521 ALA LEU LEU GLU ASN GLY ALA LYS ALA GLY SER LEU VAL SEQRES 17 A 521 ILE MET ASP VAL LYS THR GLY GLU ILE LEU ALA MET THR SEQRES 18 A 521 ASN GLN PRO THR TYR ASN PRO ASN ASN ARG ARG ASN LEU SEQRES 19 A 521 GLN PRO ALA ALA MET ARG ASN ARG ALA MET ILE ASP VAL SEQRES 20 A 521 PHE GLU PRO GLY SER THR VAL LYS PRO PHE SER MET SER SEQRES 21 A 521 ALA ALA LEU ALA SER GLY ARG TRP LYS PRO SER ASP ILE SEQRES 22 A 521 VAL ASP VAL TYR PRO GLY THR LEU GLN ILE GLY ARG TYR SEQRES 23 A 521 THR ILE ARG ASP VAL SER ARG ASN SER ARG GLN LEU ASP SEQRES 24 A 521 LEU THR GLY ILE LEU ILE LYS SER SER ASN VAL GLY ILE SEQRES 25 A 521 SER LYS ILE ALA PHE ASP ILE GLY ALA GLU SER ILE TYR SEQRES 26 A 521 SER VAL MET GLN GLN VAL GLY LEU GLY GLN ASP THR GLY SEQRES 27 A 521 LEU GLY PHE PRO GLY GLU ARG VAL GLY ASN LEU PRO ASN SEQRES 28 A 521 HIS ARG LYS TRP PRO LYS ALA GLU THR ALA THR LEU ALA SEQRES 29 A 521 TYR GLY TYR GLY LEU SER VAL THR ALA ILE GLN LEU ALA SEQRES 30 A 521 HIS ALA TYR ALA ALA LEU ALA ASN ASP GLY LYS SER VAL SEQRES 31 A 521 PRO LEU SER MET THR ARG VAL ASP ARG VAL PRO ASP GLY SEQRES 32 A 521 VAL GLN VAL ILE SER PRO GLU VAL ALA SER THR VAL GLN SEQRES 33 A 521 GLY MET LEU GLN GLN VAL VAL GLU ALA GLN GLY GLY VAL SEQRES 34 A 521 PHE ARG ALA GLN VAL PRO GLY TYR HIS ALA ALA GLY LYS SEQRES 35 A 521 SER GLY THR ALA ARG LYS VAL SER VAL GLY THR LYS GLY SEQRES 36 A 521 TYR ARG GLU ASN ALA TYR ARG SER LEU PHE ALA GLY PHE SEQRES 37 A 521 ALA PRO ALA THR ASP PRO ARG ILE ALA MET VAL VAL VAL SEQRES 38 A 521 ILE ASP GLU PRO SER LYS ALA GLY TYR PHE GLY GLY LEU SEQRES 39 A 521 VAL SER ALA PRO VAL PHE SER LYS VAL MET ALA GLY ALA SEQRES 40 A 521 LEU ARG LEU MET ASN VAL PRO PRO ASP ASN LEU PRO THR SEQRES 41 A 521 ALA HET GOL A2201 6 HET GOL A2202 6 HET GOL A2203 6 HET ODZ A2204 19 HET GOL A2205 6 HET GOL A2206 6 HETNAM GOL GLYCEROL HETNAM ODZ 2-(4-HYDROXYPHENYL)-~{N}-[(2~{S})-2-METHYL-4-OXIDANYL- HETNAM 2 ODZ 1-OXIDANYLIDENE-PENT-4-EN-2-YL]ETHANAMIDE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 5(C3 H8 O3) FORMUL 5 ODZ C14 H17 N O4 FORMUL 8 HOH *348(H2 O) HELIX 1 AA1 ASN A 85 MET A 90 1 6 HELIX 2 AA2 THR A 91 GLU A 94 5 4 HELIX 3 AA3 ARG A 95 LEU A 103 1 9 HELIX 4 AA4 ASP A 106 ASN A 117 1 12 HELIX 5 AA5 THR A 130 ALA A 139 1 10 HELIX 6 AA6 ALA A 157 VAL A 160 5 4 HELIX 7 AA7 VAL A 161 GLY A 166 1 6 HELIX 8 AA8 GLU A 176 PHE A 182 1 7 HELIX 9 AA9 PHE A 182 GLY A 188 1 7 HELIX 10 AB1 ASP A 224 ASN A 242 1 19 HELIX 11 AB2 GLN A 277 ARG A 282 5 6 HELIX 12 AB3 ASN A 283 ASP A 288 1 6 HELIX 13 AB4 PRO A 292 THR A 295 5 4 HELIX 14 AB5 VAL A 296 SER A 307 1 12 HELIX 15 AB6 LEU A 342 LYS A 348 1 7 HELIX 16 AB7 SER A 350 GLY A 362 1 13 HELIX 17 AB8 GLY A 362 VAL A 373 1 12 HELIX 18 AB9 PRO A 398 GLY A 408 1 11 HELIX 19 AC1 THR A 414 ASN A 427 1 14 HELIX 20 AC2 SER A 450 ALA A 467 1 18 HELIX 21 AC3 VAL A 471 GLN A 475 5 5 HELIX 22 AC4 SER A 538 MET A 553 1 16 SHEET 1 AA1 3 ARG A 51 ILE A 58 0 SHEET 2 AA1 3 GLY A 191 ASP A 198 -1 O ARG A 193 N ILE A 56 SHEET 3 AA1 3 VAL A 203 LYS A 211 -1 O GLN A 208 N GLN A 194 SHEET 1 AA2 3 ILE A 123 LEU A 129 0 SHEET 2 AA2 3 PRO A 72 ALA A 84 -1 N THR A 80 O LEU A 129 SHEET 3 AA2 3 VAL A 145 PHE A 154 -1 O GLU A 150 N VAL A 79 SHEET 1 AA3 4 ILE A 123 LEU A 129 0 SHEET 2 AA3 4 PRO A 72 ALA A 84 -1 N THR A 80 O LEU A 129 SHEET 3 AA3 4 ILE A 65 THR A 66 -1 N ILE A 65 O LEU A 73 SHEET 4 AA3 4 LEU A 219 ALA A 220 1 O LEU A 219 N THR A 66 SHEET 1 AA4 5 ILE A 259 GLN A 265 0 SHEET 2 AA4 5 ALA A 246 ASP A 253 -1 N ILE A 251 O ALA A 261 SHEET 3 AA4 5 ILE A 518 ASP A 525 -1 O ASP A 525 N ALA A 246 SHEET 4 AA4 5 ARG A 504 ALA A 511 -1 N SER A 505 O ILE A 524 SHEET 5 AA4 5 ALA A 482 THR A 487 -1 N GLY A 486 O LEU A 506 SHEET 1 AA5 2 ILE A 315 ASP A 317 0 SHEET 2 AA5 2 GLN A 339 ASP A 341 -1 O LEU A 340 N VAL A 316 SHEET 1 AA6 2 THR A 322 ILE A 325 0 SHEET 2 AA6 2 TYR A 328 ARG A 331 -1 O TYR A 328 N ILE A 325 SHEET 1 AA7 2 LYS A 430 SER A 431 0 SHEET 2 AA7 2 VAL A 446 GLN A 447 -1 O VAL A 446 N SER A 431 LINK OG SER A 294 C12 ODZ A2204 1555 1555 1.43 CISPEP 1 GLN A 265 PRO A 266 0 -7.54 CISPEP 2 TYR A 319 PRO A 320 0 -4.61 CISPEP 3 ALA A 511 PRO A 512 0 -14.16 SITE 1 AC1 8 GLY A 247 SER A 248 ARG A 284 ASP A 288 SITE 2 AC1 8 ARG A 504 VAL A 523 ASP A 525 HOH A2335 SITE 1 AC2 8 GLU A 94 PRO A 97 LEU A 305 TRP A 310 SITE 2 AC2 8 LYS A 311 GLU A 452 THR A 456 HOH A2453 SITE 1 AC3 6 SER A 334 ARG A 335 ASN A 336 ASN A 427 SITE 2 AC3 6 ASP A 428 HOH A2478 SITE 1 AC4 12 GLU A 291 SER A 294 VAL A 333 SER A 349 SITE 2 AC4 12 ASN A 351 TYR A 407 TYR A 409 GLY A 486 SITE 3 AC4 12 THR A 487 HOH A2358 HOH A2369 HOH A2440 SITE 1 AC5 6 PRO A 49 ALA A 50 THR A 218 ALA A 220 SITE 2 AC5 6 ARG A 438 HOH A2362 SITE 1 AC6 7 LEU A 225 ARG A 226 TYR A 229 ARG A 387 SITE 2 AC6 7 GLY A 389 HOH A2396 HOH A2475 CRYST1 68.568 83.128 90.063 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014584 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012030 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011103 0.00000