HEADER TRANSFERASE 10-MAR-20 6Y9S TITLE CRYSTAL STRUCTURE OF GSK-3B IN COMPLEX WITH THE IMIDAZO[1,5- TITLE 2 A]PYRIDINE-3-CARBOXAMIDE INHIBITOR 16 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOGEN SYNTHASE KINASE-3 BETA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: KINASE DOMAIN; COMPND 5 SYNONYM: GSK-3 BETA,SERINE/THREONINE-PROTEIN KINASE GSK3B; COMPND 6 EC: 2.7.11.26,2.7.11.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GSK3B; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS GLYCOGEN SYNTHASE KINASE-3 BETA, INDAZOLE, INHIBITOR, KINASE, KEYWDS 2 TRANSFERASE, PROTEROS BIOSTRUCTURES GMBH EXPDTA X-RAY DIFFRACTION AUTHOR S.KRAPP,A.GRIESSNER,M.BLAESSE,R.BUONFIGLIO,R.OMBRATO REVDAT 1 20-MAY-20 6Y9S 0 JRNL AUTH R.BUONFIGLIO,F.PRATI,M.BISCHETTI,C.CAVARISCHIA,G.FURLOTTI, JRNL AUTH 2 R.OMBRATO JRNL TITL DISCOVERY OF NOVEL IMIDAZOPYRIDINE GSK-3 BETA INHIBITORS JRNL TITL 2 SUPPORTED BY COMPUTATIONAL APPROACHES. JRNL REF MOLECULES V. 25 2020 JRNL REFN ESSN 1420-3049 JRNL PMID 32380735 JRNL DOI 10.3390/MOLECULES25092163 REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 49126 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.300 REMARK 3 FREE R VALUE TEST SET COUNT : 1682 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.03 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3007 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.42 REMARK 3 BIN R VALUE (WORKING SET) : 0.3730 REMARK 3 BIN FREE R VALUE SET COUNT : 85 REMARK 3 BIN FREE R VALUE : 0.3490 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5472 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 70 REMARK 3 SOLVENT ATOMS : 282 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.02000 REMARK 3 B22 (A**2) : 0.07000 REMARK 3 B33 (A**2) : 1.42000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.30000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.199 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.179 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.164 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.563 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5612 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5335 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7661 ; 1.511 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12248 ; 1.201 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 686 ; 6.413 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 235 ;35.625 ;23.362 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 880 ;12.258 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;15.043 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 866 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6304 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1270 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6Y9S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1292107210. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100.000 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99997 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50808 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 65.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.4 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : 0.44800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.780 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.10 M TRISAC PH8.25 26 % PEG 8K 0.13 REMARK 280 M NACL, VAPOR DIFFUSION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.09250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 288 REMARK 465 THR A 289 REMARK 465 GLU A 290 REMARK 465 PHE A 291 REMARK 465 LYS A 292 REMARK 465 ILE A 384 REMARK 465 LYS B 91 REMARK 465 ARG B 92 REMARK 465 PHE B 93 REMARK 465 LYS B 94 REMARK 465 GLY B 120 REMARK 465 ASN B 287 REMARK 465 TYR B 288 REMARK 465 THR B 289 REMARK 465 GLU B 290 REMARK 465 ILE B 384 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 36 CE NZ REMARK 480 LYS A 74 NZ REMARK 480 LYS A 91 CG CD CE NZ REMARK 480 ARG A 92 CG CD NE CZ NH1 NH2 REMARK 480 LYS A 94 CG CD CE NZ REMARK 480 LYS A 123 CG CD CE NZ REMARK 480 LYS A 150 NZ REMARK 480 ARG A 209 NE CZ NH1 NH2 REMARK 480 ARG A 278 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 279 CD OE1 OE2 REMARK 480 GLU A 283 CD OE1 OE2 REMARK 480 LYS A 297 CD CE NZ REMARK 480 LYS A 303 CE NZ REMARK 480 ARG A 306 CD NE CZ NH1 NH2 REMARK 480 LYS A 349 NZ REMARK 480 LYS B 36 CG CD CE NZ REMARK 480 PRO B 48 CG CD REMARK 480 ASP B 49 CG OD1 OD2 REMARK 480 ARG B 50 CG CD NE CZ NH1 NH2 REMARK 480 LYS B 60 NZ REMARK 480 LYS B 74 NZ REMARK 480 ASN B 95 CG OD1 ND2 REMARK 480 LYS B 122 CD CE NZ REMARK 480 ASP B 124 CG OD1 OD2 REMARK 480 LYS B 150 CE NZ REMARK 480 ARG B 209 CD NE CZ NH1 NH2 REMARK 480 GLU B 279 CD OE1 OE2 REMARK 480 LYS B 292 CD CE NZ REMARK 480 LYS B 297 CD CE NZ REMARK 480 LYS B 303 CD CE NZ REMARK 480 ARG B 308 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 279 CG GLU A 279 CD -0.095 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 123 -73.41 -72.02 REMARK 500 ASP A 124 50.87 -104.72 REMARK 500 ASP A 181 44.03 -169.43 REMARK 500 CYS A 199 -36.37 -144.68 REMARK 500 CYS A 218 163.56 78.21 REMARK 500 ASP A 233 74.90 -110.98 REMARK 500 PRO A 294 109.61 -58.96 REMARK 500 PHE A 339 -38.92 -38.74 REMARK 500 ASN A 370 77.80 -157.74 REMARK 500 ASP B 181 45.81 -165.46 REMARK 500 CYS B 199 -29.11 -142.08 REMARK 500 CYS B 218 156.26 74.78 REMARK 500 SER B 261 158.60 -49.10 REMARK 500 VAL B 272 -60.39 -98.69 REMARK 500 ASN B 285 116.83 -164.73 REMARK 500 ASN B 370 78.04 -162.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OHK A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OHK B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 402 DBREF 6Y9S A 35 384 UNP P49841 GSK3B_HUMAN 35 384 DBREF 6Y9S B 35 384 UNP P49841 GSK3B_HUMAN 35 384 SEQRES 1 A 350 SER LYS VAL THR THR VAL VAL ALA THR PRO GLY GLN GLY SEQRES 2 A 350 PRO ASP ARG PRO GLN GLU VAL SER TYR THR ASP THR LYS SEQRES 3 A 350 VAL ILE GLY ASN GLY SER PHE GLY VAL VAL TYR GLN ALA SEQRES 4 A 350 LYS LEU CYS ASP SER GLY GLU LEU VAL ALA ILE LYS LYS SEQRES 5 A 350 VAL LEU GLN ASP LYS ARG PHE LYS ASN ARG GLU LEU GLN SEQRES 6 A 350 ILE MET ARG LYS LEU ASP HIS CYS ASN ILE VAL ARG LEU SEQRES 7 A 350 ARG TYR PHE PHE TYR SER SER GLY GLU LYS LYS ASP GLU SEQRES 8 A 350 VAL TYR LEU ASN LEU VAL LEU ASP TYR VAL PRO GLU THR SEQRES 9 A 350 VAL TYR ARG VAL ALA ARG HIS TYR SER ARG ALA LYS GLN SEQRES 10 A 350 THR LEU PRO VAL ILE TYR VAL LYS LEU TYR MET TYR GLN SEQRES 11 A 350 LEU PHE ARG SER LEU ALA TYR ILE HIS SER PHE GLY ILE SEQRES 12 A 350 CYS HIS ARG ASP ILE LYS PRO GLN ASN LEU LEU LEU ASP SEQRES 13 A 350 PRO ASP THR ALA VAL LEU LYS LEU CYS ASP PHE GLY SER SEQRES 14 A 350 ALA LYS GLN LEU VAL ARG GLY GLU PRO ASN VAL SER PTR SEQRES 15 A 350 ILE CYS SER ARG TYR TYR ARG ALA PRO GLU LEU ILE PHE SEQRES 16 A 350 GLY ALA THR ASP TYR THR SER SER ILE ASP VAL TRP SER SEQRES 17 A 350 ALA GLY CYS VAL LEU ALA GLU LEU LEU LEU GLY GLN PRO SEQRES 18 A 350 ILE PHE PRO GLY ASP SER GLY VAL ASP GLN LEU VAL GLU SEQRES 19 A 350 ILE ILE LYS VAL LEU GLY THR PRO THR ARG GLU GLN ILE SEQRES 20 A 350 ARG GLU MET ASN PRO ASN TYR THR GLU PHE LYS PHE PRO SEQRES 21 A 350 GLN ILE LYS ALA HIS PRO TRP THR LYS VAL PHE ARG PRO SEQRES 22 A 350 ARG THR PRO PRO GLU ALA ILE ALA LEU CYS SER ARG LEU SEQRES 23 A 350 LEU GLU TYR THR PRO THR ALA ARG LEU THR PRO LEU GLU SEQRES 24 A 350 ALA CYS ALA HIS SER PHE PHE ASP GLU LEU ARG ASP PRO SEQRES 25 A 350 ASN VAL LYS LEU PRO ASN GLY ARG ASP THR PRO ALA LEU SEQRES 26 A 350 PHE ASN PHE THR THR GLN GLU LEU SER SER ASN PRO PRO SEQRES 27 A 350 LEU ALA THR ILE LEU ILE PRO PRO HIS ALA ARG ILE SEQRES 1 B 350 SER LYS VAL THR THR VAL VAL ALA THR PRO GLY GLN GLY SEQRES 2 B 350 PRO ASP ARG PRO GLN GLU VAL SER TYR THR ASP THR LYS SEQRES 3 B 350 VAL ILE GLY ASN GLY SER PHE GLY VAL VAL TYR GLN ALA SEQRES 4 B 350 LYS LEU CYS ASP SER GLY GLU LEU VAL ALA ILE LYS LYS SEQRES 5 B 350 VAL LEU GLN ASP LYS ARG PHE LYS ASN ARG GLU LEU GLN SEQRES 6 B 350 ILE MET ARG LYS LEU ASP HIS CYS ASN ILE VAL ARG LEU SEQRES 7 B 350 ARG TYR PHE PHE TYR SER SER GLY GLU LYS LYS ASP GLU SEQRES 8 B 350 VAL TYR LEU ASN LEU VAL LEU ASP TYR VAL PRO GLU THR SEQRES 9 B 350 VAL TYR ARG VAL ALA ARG HIS TYR SER ARG ALA LYS GLN SEQRES 10 B 350 THR LEU PRO VAL ILE TYR VAL LYS LEU TYR MET TYR GLN SEQRES 11 B 350 LEU PHE ARG SER LEU ALA TYR ILE HIS SER PHE GLY ILE SEQRES 12 B 350 CYS HIS ARG ASP ILE LYS PRO GLN ASN LEU LEU LEU ASP SEQRES 13 B 350 PRO ASP THR ALA VAL LEU LYS LEU CYS ASP PHE GLY SER SEQRES 14 B 350 ALA LYS GLN LEU VAL ARG GLY GLU PRO ASN VAL SER PTR SEQRES 15 B 350 ILE CYS SER ARG TYR TYR ARG ALA PRO GLU LEU ILE PHE SEQRES 16 B 350 GLY ALA THR ASP TYR THR SER SER ILE ASP VAL TRP SER SEQRES 17 B 350 ALA GLY CYS VAL LEU ALA GLU LEU LEU LEU GLY GLN PRO SEQRES 18 B 350 ILE PHE PRO GLY ASP SER GLY VAL ASP GLN LEU VAL GLU SEQRES 19 B 350 ILE ILE LYS VAL LEU GLY THR PRO THR ARG GLU GLN ILE SEQRES 20 B 350 ARG GLU MET ASN PRO ASN TYR THR GLU PHE LYS PHE PRO SEQRES 21 B 350 GLN ILE LYS ALA HIS PRO TRP THR LYS VAL PHE ARG PRO SEQRES 22 B 350 ARG THR PRO PRO GLU ALA ILE ALA LEU CYS SER ARG LEU SEQRES 23 B 350 LEU GLU TYR THR PRO THR ALA ARG LEU THR PRO LEU GLU SEQRES 24 B 350 ALA CYS ALA HIS SER PHE PHE ASP GLU LEU ARG ASP PRO SEQRES 25 B 350 ASN VAL LYS LEU PRO ASN GLY ARG ASP THR PRO ALA LEU SEQRES 26 B 350 PHE ASN PHE THR THR GLN GLU LEU SER SER ASN PRO PRO SEQRES 27 B 350 LEU ALA THR ILE LEU ILE PRO PRO HIS ALA ARG ILE MODRES 6Y9S PTR A 216 TYR MODIFIED RESIDUE MODRES 6Y9S PTR B 216 TYR MODIFIED RESIDUE HET PTR A 216 16 HET PTR B 216 16 HET OHK A 401 29 HET ACT A 402 4 HET ACT A 403 4 HET OHK B 401 29 HET ACT B 402 4 HETNAM PTR O-PHOSPHOTYROSINE HETNAM OHK ~{N}-(OXAN-4-YLMETHYL)-6-(5-PROPAN-2-YLOXYPYRIDIN-3- HETNAM 2 OHK YL)IMIDAZO[1,5-A]PYRIDINE-3-CARBOXAMIDE HETNAM ACT ACETATE ION HETSYN PTR PHOSPHONOTYROSINE FORMUL 1 PTR 2(C9 H12 N O6 P) FORMUL 3 OHK 2(C22 H26 N4 O3) FORMUL 4 ACT 3(C2 H3 O2 1-) FORMUL 8 HOH *282(H2 O) HELIX 1 AA1 ASN A 95 LYS A 103 1 9 HELIX 2 AA2 VAL A 139 ALA A 149 1 11 HELIX 3 AA3 PRO A 154 SER A 174 1 21 HELIX 4 AA4 LYS A 183 GLN A 185 5 3 HELIX 5 AA5 SER A 219 ARG A 223 5 5 HELIX 6 AA6 ALA A 224 PHE A 229 1 6 HELIX 7 AA7 SER A 236 GLY A 253 1 18 HELIX 8 AA8 VAL A 263 GLY A 274 1 12 HELIX 9 AA9 THR A 277 ASN A 285 1 9 HELIX 10 AB1 PRO A 300 PHE A 305 1 6 HELIX 11 AB2 PRO A 310 ARG A 319 1 10 HELIX 12 AB3 THR A 324 ARG A 328 5 5 HELIX 13 AB4 THR A 330 ALA A 336 1 7 HELIX 14 AB5 HIS A 337 PHE A 339 5 3 HELIX 15 AB6 PHE A 340 ASP A 345 1 6 HELIX 16 AB7 THR A 363 SER A 368 1 6 HELIX 17 AB8 SER A 369 PRO A 372 5 4 HELIX 18 AB9 LEU A 373 ILE A 378 1 6 HELIX 19 AC1 PRO A 379 ARG A 383 5 5 HELIX 20 AC2 ARG B 96 LEU B 104 1 9 HELIX 21 AC3 VAL B 139 ALA B 149 1 11 HELIX 22 AC4 PRO B 154 PHE B 175 1 22 HELIX 23 AC5 LYS B 183 GLN B 185 5 3 HELIX 24 AC6 SER B 219 ARG B 223 5 5 HELIX 25 AC7 ALA B 224 PHE B 229 1 6 HELIX 26 AC8 SER B 237 GLY B 253 1 17 HELIX 27 AC9 VAL B 263 GLY B 274 1 12 HELIX 28 AD1 THR B 277 ASN B 285 1 9 HELIX 29 AD2 PRO B 300 PHE B 305 1 6 HELIX 30 AD3 PRO B 310 LEU B 321 1 12 HELIX 31 AD4 THR B 324 ARG B 328 5 5 HELIX 32 AD5 THR B 330 HIS B 337 1 8 HELIX 33 AD6 PHE B 340 ASP B 345 1 6 HELIX 34 AD7 THR B 363 SER B 368 1 6 HELIX 35 AD8 ASN B 370 PRO B 372 5 3 HELIX 36 AD9 LEU B 373 ILE B 378 1 6 HELIX 37 AE1 PRO B 379 ARG B 383 5 5 SHEET 1 AA1 7 THR A 38 PRO A 44 0 SHEET 2 AA1 7 GLN A 52 GLY A 65 -1 O TYR A 56 N THR A 38 SHEET 3 AA1 7 GLY A 68 LEU A 75 -1 O GLN A 72 N LYS A 60 SHEET 4 AA1 7 LEU A 81 GLN A 89 -1 O LYS A 86 N VAL A 69 SHEET 5 AA1 7 VAL A 126 ASP A 133 -1 O LEU A 132 N ALA A 83 SHEET 6 AA1 7 LEU A 112 SER A 118 -1 N TYR A 114 O VAL A 131 SHEET 7 AA1 7 THR A 38 PRO A 44 -1 N THR A 43 O PHE A 115 SHEET 1 AA2 3 GLU A 137 THR A 138 0 SHEET 2 AA2 3 LEU A 187 LEU A 189 -1 O LEU A 189 N GLU A 137 SHEET 3 AA2 3 LEU A 196 LEU A 198 -1 O LYS A 197 N LEU A 188 SHEET 1 AA3 2 ILE A 177 CYS A 178 0 SHEET 2 AA3 2 LYS A 205 GLN A 206 -1 O LYS A 205 N CYS A 178 SHEET 1 AA4 7 THR B 38 PRO B 44 0 SHEET 2 AA4 7 GLN B 52 GLY B 65 -1 O VAL B 54 N VAL B 40 SHEET 3 AA4 7 GLY B 68 LEU B 75 -1 O VAL B 70 N GLY B 63 SHEET 4 AA4 7 LEU B 81 LEU B 88 -1 O LYS B 86 N VAL B 69 SHEET 5 AA4 7 TYR B 127 ASP B 133 -1 O LEU B 128 N VAL B 87 SHEET 6 AA4 7 LEU B 112 SER B 118 -1 N PHE B 116 O ASN B 129 SHEET 7 AA4 7 THR B 38 PRO B 44 -1 N THR B 43 O PHE B 115 SHEET 1 AA5 3 GLU B 137 THR B 138 0 SHEET 2 AA5 3 LEU B 187 ASP B 190 -1 O LEU B 189 N GLU B 137 SHEET 3 AA5 3 VAL B 195 LEU B 198 -1 O LYS B 197 N LEU B 188 SHEET 1 AA6 2 ILE B 177 CYS B 178 0 SHEET 2 AA6 2 LYS B 205 GLN B 206 -1 O LYS B 205 N CYS B 178 LINK C SER A 215 N PTR A 216 1555 1555 1.34 LINK C PTR A 216 N ILE A 217 1555 1555 1.33 LINK C SER B 215 N PTR B 216 1555 1555 1.34 LINK C PTR B 216 N ILE B 217 1555 1555 1.33 SITE 1 AC1 16 ILE A 62 PHE A 67 ALA A 83 LYS A 85 SITE 2 AC1 16 LEU A 132 ASP A 133 TYR A 134 VAL A 135 SITE 3 AC1 16 PRO A 136 ARG A 141 ASN A 186 LEU A 188 SITE 4 AC1 16 CYS A 199 ASP A 200 HOH A 522 HOH A 555 SITE 1 AC2 5 ARG A 96 ARG A 180 LYS A 205 ASN A 213 SITE 2 AC2 5 VAL A 214 SITE 1 AC3 2 GLN A 151 THR A 152 SITE 1 AC4 16 PHE B 67 ALA B 83 LYS B 85 LEU B 132 SITE 2 AC4 16 ASP B 133 TYR B 134 VAL B 135 PRO B 136 SITE 3 AC4 16 THR B 138 ARG B 141 ASN B 186 LEU B 188 SITE 4 AC4 16 CYS B 199 ASP B 200 HOH B 537 HOH B 560 SITE 1 AC5 5 ARG B 96 ARG B 180 LYS B 205 ASN B 213 SITE 2 AC5 5 VAL B 214 CRYST1 67.109 96.185 67.560 90.00 103.59 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014901 0.000000 0.003603 0.00000 SCALE2 0.000000 0.010397 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015228 0.00000