HEADER OXIDOREDUCTASE 18-MAR-20 6YC8 TITLE CRYSTAL STRUCTURE OF KRED1-PGLU ENZYME COMPND MOL_ID: 1; COMPND 2 MOLECULE: KETOREDUCTASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OGATAEA GLUCOZYMA; SOURCE 3 ORGANISM_TAXID: 36023; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KETOREDUCTASE, CARBONYL REDUCTASE, PICHIA GLUCOZYMA, ENANTIOSELECTIVE KEYWDS 2 REDUCTION BIOCATALYSIS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR F.DI PISA REVDAT 2 24-JAN-24 6YC8 1 REMARK REVDAT 1 10-FEB-21 6YC8 0 JRNL AUTH M.RABUFFETTI,P.CANNAZZA,M.L.CONTENTE,A.PINTO,D.ROMANO, JRNL AUTH 2 P.HOYOS,A.R.ALCANTARA,I.EBERINI,T.LAURENZI,L.GOURLAY, JRNL AUTH 3 F.DI PISA,F.MOLINARI JRNL TITL STRUCTURAL INSIGHTS INTO THE DESYMMETRIZATION OF BULKY JRNL TITL 2 1,2-DICARBONYLS THROUGH ENZYMATIC MONOREDUCTION. JRNL REF BIOORG.CHEM. V. 108 04644 2021 JRNL REFN ISSN 0045-2068 JRNL PMID 33486371 JRNL DOI 10.1016/J.BIOORG.2021.104644 REMARK 2 REMARK 2 RESOLUTION. 1.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.580 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 51773 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 2571 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 4.6400 - 3.6800 1.00 2831 145 0.1451 0.1638 REMARK 3 2 3.6800 - 3.2200 1.00 2779 153 0.1678 0.1983 REMARK 3 3 3.2200 - 2.9200 1.00 2731 164 0.1747 0.2174 REMARK 3 4 2.9200 - 2.7100 1.00 2743 139 0.1748 0.1868 REMARK 3 5 2.7100 - 2.5500 1.00 2769 127 0.1562 0.1662 REMARK 3 6 2.5500 - 2.4200 1.00 2714 139 0.1465 0.1592 REMARK 3 7 2.4200 - 2.3200 1.00 2696 159 0.1403 0.1644 REMARK 3 8 2.3200 - 2.2300 1.00 2702 148 0.1529 0.1637 REMARK 3 9 2.2300 - 2.1500 1.00 2702 158 0.1642 0.1911 REMARK 3 10 2.1500 - 2.0900 1.00 2701 133 0.1740 0.1810 REMARK 3 11 2.0900 - 2.0300 1.00 2706 128 0.2001 0.2632 REMARK 3 12 2.0300 - 1.9700 1.00 2702 136 0.2266 0.2294 REMARK 3 13 1.9700 - 1.9200 1.00 2723 110 0.2581 0.2752 REMARK 3 14 1.9200 - 1.8800 1.00 2664 147 0.2852 0.3027 REMARK 3 15 1.8800 - 1.8400 1.00 2699 140 0.3189 0.3413 REMARK 3 16 1.8400 - 1.8000 1.00 2668 149 0.3504 0.3525 REMARK 3 17 1.8000 - 1.7700 1.00 2679 134 0.3814 0.4192 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.225 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.908 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.71 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 2000 REMARK 3 ANGLE : 1.315 2704 REMARK 3 CHIRALITY : 0.093 309 REMARK 3 PLANARITY : 0.007 339 REMARK 3 DIHEDRAL : 6.423 1601 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.4100 -12.2890 -9.6381 REMARK 3 T TENSOR REMARK 3 T11: 0.2174 T22: 0.1208 REMARK 3 T33: 0.1524 T12: -0.0601 REMARK 3 T13: 0.1091 T23: 0.0573 REMARK 3 L TENSOR REMARK 3 L11: 0.5681 L22: 0.4696 REMARK 3 L33: 0.7580 L12: -0.3221 REMARK 3 L13: -0.1413 L23: 0.3412 REMARK 3 S TENSOR REMARK 3 S11: 0.0823 S12: 0.5663 S13: 0.2513 REMARK 3 S21: -0.4304 S22: -0.2254 S23: -0.1093 REMARK 3 S31: -0.2518 S32: 0.0704 S33: -0.2131 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.8696 -8.3382 -11.2818 REMARK 3 T TENSOR REMARK 3 T11: 0.4247 T22: 0.2792 REMARK 3 T33: 0.2109 T12: 0.0140 REMARK 3 T13: 0.0260 T23: 0.0329 REMARK 3 L TENSOR REMARK 3 L11: 0.6317 L22: 0.3943 REMARK 3 L33: 0.5513 L12: -0.0753 REMARK 3 L13: 0.5975 L23: -0.2442 REMARK 3 S TENSOR REMARK 3 S11: -0.0855 S12: 0.2696 S13: 0.0668 REMARK 3 S21: -0.2904 S22: -0.0213 S23: -0.0086 REMARK 3 S31: -0.2588 S32: -0.0155 S33: -0.0010 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.8685 -15.6729 -12.1241 REMARK 3 T TENSOR REMARK 3 T11: 0.4395 T22: 0.3729 REMARK 3 T33: 0.2818 T12: 0.0038 REMARK 3 T13: -0.0798 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 0.0603 L22: 0.0393 REMARK 3 L33: 0.0382 L12: -0.0064 REMARK 3 L13: 0.0472 L23: 0.0093 REMARK 3 S TENSOR REMARK 3 S11: 0.1741 S12: 0.4600 S13: 0.3658 REMARK 3 S21: -0.2839 S22: -0.1877 S23: 0.3904 REMARK 3 S31: 0.0422 S32: -0.8330 S33: -0.0006 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 77 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.6429 -15.4108 6.7294 REMARK 3 T TENSOR REMARK 3 T11: 0.2608 T22: 0.2385 REMARK 3 T33: 0.2161 T12: -0.0227 REMARK 3 T13: -0.0139 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 0.3652 L22: 0.9494 REMARK 3 L33: 0.1919 L12: 0.1616 REMARK 3 L13: 0.0840 L23: -0.4080 REMARK 3 S TENSOR REMARK 3 S11: -0.0752 S12: 0.0883 S13: 0.0365 REMARK 3 S21: -0.0984 S22: -0.0841 S23: -0.1026 REMARK 3 S31: -0.4934 S32: -0.0069 S33: 0.0001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.1945 -23.8042 2.6654 REMARK 3 T TENSOR REMARK 3 T11: 0.2029 T22: 0.1783 REMARK 3 T33: 0.2214 T12: -0.0031 REMARK 3 T13: 0.0245 T23: -0.0148 REMARK 3 L TENSOR REMARK 3 L11: 0.7677 L22: 1.1373 REMARK 3 L33: 0.6030 L12: 0.2328 REMARK 3 L13: -0.0280 L23: -0.3393 REMARK 3 S TENSOR REMARK 3 S11: -0.1127 S12: 0.0771 S13: -0.0503 REMARK 3 S21: -0.1555 S22: -0.0117 S23: -0.0855 REMARK 3 S31: -0.0385 S32: -0.0286 S33: -0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 178 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.0050 -6.1475 11.0941 REMARK 3 T TENSOR REMARK 3 T11: 0.3983 T22: 0.2245 REMARK 3 T33: 0.3948 T12: -0.0667 REMARK 3 T13: -0.0690 T23: 0.0165 REMARK 3 L TENSOR REMARK 3 L11: 0.2896 L22: 0.0176 REMARK 3 L33: 0.2510 L12: -0.0662 REMARK 3 L13: -0.1098 L23: 0.0493 REMARK 3 S TENSOR REMARK 3 S11: 0.0376 S12: 0.0437 S13: 0.2300 REMARK 3 S21: 0.0696 S22: -0.0144 S23: -0.5126 REMARK 3 S31: -0.5543 S32: 0.0184 S33: 0.0098 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 199 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): 63.1731 -7.2441 11.8943 REMARK 3 T TENSOR REMARK 3 T11: 0.2957 T22: 0.4537 REMARK 3 T33: 0.5766 T12: -0.1374 REMARK 3 T13: -0.1057 T23: 0.0169 REMARK 3 L TENSOR REMARK 3 L11: 0.3354 L22: 0.9424 REMARK 3 L33: 0.7777 L12: -0.4891 REMARK 3 L13: -0.3191 L23: 0.6490 REMARK 3 S TENSOR REMARK 3 S11: 0.3180 S12: -0.1065 S13: -0.3712 REMARK 3 S21: -0.0362 S22: 0.1718 S23: -0.5703 REMARK 3 S31: -0.1207 S32: 0.8230 S33: 0.1222 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 217 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.3745 -17.5441 -8.1972 REMARK 3 T TENSOR REMARK 3 T11: 0.4016 T22: 0.3696 REMARK 3 T33: 0.3878 T12: 0.0286 REMARK 3 T13: 0.1610 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 0.0451 L22: 0.5479 REMARK 3 L33: 0.1011 L12: -0.0088 REMARK 3 L13: -0.0118 L23: 0.0525 REMARK 3 S TENSOR REMARK 3 S11: 0.0599 S12: 0.4295 S13: -0.0981 REMARK 3 S21: -0.1552 S22: -0.0894 S23: -0.8274 REMARK 3 S31: -0.0639 S32: 0.3025 S33: -0.0181 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 231 THROUGH 241 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.5729 -31.1016 -3.1922 REMARK 3 T TENSOR REMARK 3 T11: 0.3286 T22: 0.3088 REMARK 3 T33: 0.4930 T12: -0.0388 REMARK 3 T13: 0.1364 T23: -0.0476 REMARK 3 L TENSOR REMARK 3 L11: 0.0197 L22: 0.0131 REMARK 3 L33: 0.0078 L12: 0.0059 REMARK 3 L13: -0.0013 L23: 0.0118 REMARK 3 S TENSOR REMARK 3 S11: -0.0286 S12: 0.1914 S13: -0.4316 REMARK 3 S21: -0.4794 S22: 0.0224 S23: -0.5913 REMARK 3 S31: -0.1533 S32: -0.0908 S33: -0.0004 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6YC8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1292107343. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51848 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.770 REMARK 200 RESOLUTION RANGE LOW (A) : 57.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 38.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3KZV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 45% V/VPEG 600, 0.1 M HEPES PH 7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 96.39467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 48.19733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 72.29600 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 24.09867 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 120.49333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 96.39467 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 48.19733 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 24.09867 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 72.29600 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 120.49333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 242 REMARK 465 TYR A 243 REMARK 465 ASP A 244 REMARK 465 ASP A 245 REMARK 465 SER A 246 REMARK 465 GLU A 247 REMARK 465 LEU A 248 REMARK 465 LYS A 249 REMARK 465 GLU A 250 REMARK 465 TYR A 251 REMARK 465 ALA A 252 REMARK 465 LYS A 253 REMARK 465 LEU A 254 REMARK 465 ALA A 255 REMARK 465 ALA A 256 REMARK 465 ALA A 257 REMARK 465 LEU A 258 REMARK 465 GLU A 259 REMARK 465 HIS A 260 REMARK 465 HIS A 261 REMARK 465 HIS A 262 REMARK 465 HIS A 263 REMARK 465 HIS A 264 REMARK 465 HIS A 265 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 42 CG CD OE1 NE2 REMARK 470 GLU A 49 CG CD OE1 OE2 REMARK 470 LYS A 203 CG CD CE NZ REMARK 470 ARG A 239 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 111 -53.37 -138.79 REMARK 500 SER A 136 -151.59 -103.64 REMARK 500 VAL A 192 -62.75 -131.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 558 DISTANCE = 7.15 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPE A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 311 DBREF1 6YC8 A 1 252 UNP A0A0H4SN47_9ASCO DBREF2 6YC8 A A0A0H4SN47 1 252 SEQADV 6YC8 TYR A 159 UNP A0A0H4SN4 HIS 159 CONFLICT SEQADV 6YC8 LYS A 253 UNP A0A0H4SN4 EXPRESSION TAG SEQADV 6YC8 LEU A 254 UNP A0A0H4SN4 EXPRESSION TAG SEQADV 6YC8 ALA A 255 UNP A0A0H4SN4 EXPRESSION TAG SEQADV 6YC8 ALA A 256 UNP A0A0H4SN4 EXPRESSION TAG SEQADV 6YC8 ALA A 257 UNP A0A0H4SN4 EXPRESSION TAG SEQADV 6YC8 LEU A 258 UNP A0A0H4SN4 EXPRESSION TAG SEQADV 6YC8 GLU A 259 UNP A0A0H4SN4 EXPRESSION TAG SEQADV 6YC8 HIS A 260 UNP A0A0H4SN4 EXPRESSION TAG SEQADV 6YC8 HIS A 261 UNP A0A0H4SN4 EXPRESSION TAG SEQADV 6YC8 HIS A 262 UNP A0A0H4SN4 EXPRESSION TAG SEQADV 6YC8 HIS A 263 UNP A0A0H4SN4 EXPRESSION TAG SEQADV 6YC8 HIS A 264 UNP A0A0H4SN4 EXPRESSION TAG SEQADV 6YC8 HIS A 265 UNP A0A0H4SN4 EXPRESSION TAG SEQRES 1 A 265 MET THR LYS VAL THR VAL VAL THR GLY ALA SER ARG GLY SEQRES 2 A 265 LEU GLY GLU ALA ILE VAL LYS GLN ILE LEU ALA ARG ASN SEQRES 3 A 265 ALA ASP ALA LYS VAL VAL ALA VAL ALA ARG SER ALA GLU SEQRES 4 A 265 ASN LEU GLN LYS LEU GLU LYS GLY SER GLU GLY ARG VAL SEQRES 5 A 265 LEU ALA VAL ALA GLY ASP VAL THR ARG PRO GLU THR ILE SEQRES 6 A 265 HIS ARG LEU ILE GLU GLU THR VAL ALA LYS PHE GLY ARG SEQRES 7 A 265 ILE ASP SER VAL VAL VAL ASN ALA GLY VAL LEU GLU PRO SEQRES 8 A 265 VAL GLN HIS ILE ASP SER LEU ASP VAL ASP LEU VAL ARG SEQRES 9 A 265 ARG LEU TYR GLU VAL ASN LEU PHE SER VAL MET ASP LEU SEQRES 10 A 265 VAL ARG GLN THR LEU PRO TYR MET ARG GLN SER LYS GLY SEQRES 11 A 265 SER TYR LEU PHE VAL SER SER GLY ALA SER THR LYS PRO SEQRES 12 A 265 TYR ASP ALA TRP SER ALA TYR GLY SER SER LYS ALA ALA SEQRES 13 A 265 LEU ASN TYR PHE CYS LEU SER LEU ALA THR GLU GLU PRO SEQRES 14 A 265 LEU ILE ARG ALA LEU SER ILE ALA PRO GLY VAL VAL ASP SEQRES 15 A 265 THR ASP MET GLN GLN ASP ILE ARG GLU VAL PHE GLY GLN SEQRES 16 A 265 ASN MET ALA PRO ASP ALA LEU LYS ARG PHE THR ASP LEU SEQRES 17 A 265 HIS GLU ASN LYS GLN LEU LEU ALA PRO GLU VAL PRO GLY SEQRES 18 A 265 GLY PHE TYR ALA SER LEU ALA LEU ARG GLY VAL PRO GLU SEQRES 19 A 265 ASN LEU ASN GLY ARG TYR VAL ARG TYR ASP ASP SER GLU SEQRES 20 A 265 LEU LYS GLU TYR ALA LYS LEU ALA ALA ALA LEU GLU HIS SEQRES 21 A 265 HIS HIS HIS HIS HIS HET NAP A 301 48 HET ACT A 302 4 HET EPE A 303 15 HET PGE A 304 10 HET PGE A 305 10 HET PEG A 306 7 HET PEG A 307 7 HET PEG A 308 7 HET PEG A 309 7 HET EDO A 310 4 HET EDO A 311 4 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM ACT ACETATE ION HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM PGE TRIETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM EDO 1,2-ETHANEDIOL HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE HETSYN EPE HEPES HETSYN EDO ETHYLENE GLYCOL FORMUL 2 NAP C21 H28 N7 O17 P3 FORMUL 3 ACT C2 H3 O2 1- FORMUL 4 EPE C8 H18 N2 O4 S FORMUL 5 PGE 2(C6 H14 O4) FORMUL 7 PEG 4(C4 H10 O3) FORMUL 11 EDO 2(C2 H6 O2) FORMUL 13 HOH *158(H2 O) HELIX 1 AA1 ARG A 12 ASN A 26 1 15 HELIX 2 AA2 SER A 37 SER A 48 1 12 HELIX 3 AA3 ARG A 61 GLY A 77 1 17 HELIX 4 AA4 HIS A 94 LEU A 98 5 5 HELIX 5 AA5 ASP A 99 LEU A 111 1 13 HELIX 6 AA6 LEU A 111 LYS A 129 1 19 HELIX 7 AA7 SER A 137 THR A 141 5 5 HELIX 8 AA8 TRP A 147 GLU A 168 1 22 HELIX 9 AA9 THR A 183 VAL A 192 1 10 HELIX 10 AB1 PHE A 193 MET A 197 5 5 HELIX 11 AB2 ALA A 198 ASN A 211 1 14 HELIX 12 AB3 PRO A 217 GLY A 231 1 15 HELIX 13 AB4 PRO A 233 ASN A 237 5 5 SHEET 1 AA1 7 VAL A 52 ALA A 56 0 SHEET 2 AA1 7 LYS A 30 ALA A 35 1 N ALA A 33 O VAL A 55 SHEET 3 AA1 7 VAL A 4 THR A 8 1 N THR A 5 O VAL A 32 SHEET 4 AA1 7 SER A 81 VAL A 84 1 O VAL A 83 N VAL A 6 SHEET 5 AA1 7 SER A 131 VAL A 135 1 O LEU A 133 N VAL A 84 SHEET 6 AA1 7 ARG A 172 ILE A 176 1 O ARG A 172 N TYR A 132 SHEET 7 AA1 7 TYR A 240 VAL A 241 1 O VAL A 241 N SER A 175 CISPEP 1 GLU A 90 PRO A 91 0 11.91 SITE 1 AC1 31 GLY A 9 SER A 11 ARG A 12 GLY A 13 SITE 2 AC1 31 LEU A 14 ALA A 35 ARG A 36 SER A 37 SITE 3 AC1 31 ASP A 58 VAL A 59 ASN A 85 ALA A 86 SITE 4 AC1 31 GLY A 87 ARG A 105 VAL A 135 SER A 136 SITE 5 AC1 31 TYR A 150 LYS A 154 PRO A 178 GLY A 179 SITE 6 AC1 31 VAL A 180 VAL A 181 THR A 183 MET A 185 SITE 7 AC1 31 GLN A 186 ACT A 302 HOH A 401 HOH A 430 SITE 8 AC1 31 HOH A 434 HOH A 446 HOH A 483 SITE 1 AC2 7 SER A 137 TRP A 147 TYR A 150 MET A 185 SITE 2 AC2 7 GLN A 186 NAP A 301 HOH A 411 SITE 1 AC3 10 HIS A 94 ASP A 96 ARG A 126 GLU A 167 SITE 2 AC3 10 GLU A 168 LEU A 170 HOH A 419 HOH A 457 SITE 3 AC3 10 HOH A 490 HOH A 512 SITE 1 AC4 3 GLY A 77 ARG A 78 GLN A 127 SITE 1 AC5 1 SER A 37 SITE 1 AC6 3 VAL A 73 ALA A 74 LYS A 75 SITE 1 AC7 4 LYS A 129 LEU A 162 ASN A 237 HOH A 418 SITE 1 AC8 3 ALA A 24 ASN A 26 ALA A 27 SITE 1 AC9 3 THR A 60 GLU A 108 HOH A 403 SITE 1 AD1 3 GLN A 195 MET A 197 HOH A 407 SITE 1 AD2 2 PRO A 123 GLN A 127 CRYST1 111.064 111.064 144.592 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009004 0.005198 0.000000 0.00000 SCALE2 0.000000 0.010397 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006916 0.00000