data_6YEM # _entry.id 6YEM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6YEM pdb_00006yem 10.2210/pdb6yem/pdb WWPDB D_1292107496 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-09-09 2 'Structure model' 1 1 2020-09-16 3 'Structure model' 1 2 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_PubMed' 5 2 'Structure model' '_citation.title' 6 3 'Structure model' '_database_2.pdbx_DOI' 7 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6YEM _pdbx_database_status.recvd_initial_deposition_date 2020-03-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Radilova, K.' 1 0000-0001-8917-2359 'Brynda, J.' 2 0000-0003-3675-6769 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country FR _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Eur.J.Med.Chem. _citation.journal_id_ASTM EJMCA5 _citation.journal_id_CSD 0493 _citation.journal_id_ISSN 0223-5234 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 208 _citation.language ? _citation.page_first 112754 _citation.page_last 112754 _citation.title ;Unraveling the anti-influenza effect of flavonoids: Experimental validation of luteolin and its congeners as potent influenza endonuclease inhibitors. ; _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.ejmech.2020.112754 _citation.pdbx_database_id_PubMed 32883638 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zima, V.' 1 ? primary 'Radilova, K.' 2 ? primary 'Kozisek, M.' 3 ? primary 'Albinana, C.B.' 4 ? primary 'Karlukova, E.' 5 ? primary 'Brynda, J.' 6 ? primary 'Fanfrlik, J.' 7 ? primary 'Flieger, M.' 8 ? primary 'Hodek, J.' 9 ? primary 'Weber, J.' 10 ? primary 'Majer, P.' 11 ? primary 'Konvalinka, J.' 12 ? primary 'Machara, A.' 13 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Polymerase acidic protein,Polymerase acidic protein' 21640.570 1 3.1.-.-,3.1.-.- ? ? ? 2 non-polymer syn 'MANGANESE (II) ION' 54.938 2 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 5 non-polymer syn '3,5,6,8-tetrakis(oxidanyl)-2-pentanoyl-naphthalene-1,4-dione' 306.267 1 ? ? ? ? 6 water nat water 18.015 19 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RNA-directed RNA polymerase subunit P2,RNA-directed RNA polymerase subunit P2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SGSGSGSGSMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDGGSKHRFEIIEGRDRIMAWTV VNSICNTTGVEKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSFTGEEMATKADYTLDEESRAR IKTRLFTIRQEMASRSLWDSFRQSER ; _entity_poly.pdbx_seq_one_letter_code_can ;SGSGSGSGSMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDGGSKHRFEIIEGRDRIMAWTV VNSICNTTGVEKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSFTGEEMATKADYTLDEESRAR IKTRLFTIRQEMASRSLWDSFRQSER ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MANGANESE (II) ION' MN 3 'MAGNESIUM ION' MG 4 'CHLORIDE ION' CL 5 '3,5,6,8-tetrakis(oxidanyl)-2-pentanoyl-naphthalene-1,4-dione' OOH 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 GLY n 1 7 SER n 1 8 GLY n 1 9 SER n 1 10 MET n 1 11 GLU n 1 12 ASP n 1 13 PHE n 1 14 VAL n 1 15 ARG n 1 16 GLN n 1 17 CYS n 1 18 PHE n 1 19 ASN n 1 20 PRO n 1 21 MET n 1 22 ILE n 1 23 VAL n 1 24 GLU n 1 25 LEU n 1 26 ALA n 1 27 GLU n 1 28 LYS n 1 29 ALA n 1 30 MET n 1 31 LYS n 1 32 GLU n 1 33 TYR n 1 34 GLY n 1 35 GLU n 1 36 ASP n 1 37 PRO n 1 38 LYS n 1 39 ILE n 1 40 GLU n 1 41 THR n 1 42 ASN n 1 43 LYS n 1 44 PHE n 1 45 ALA n 1 46 ALA n 1 47 ILE n 1 48 CYS n 1 49 THR n 1 50 HIS n 1 51 LEU n 1 52 GLU n 1 53 VAL n 1 54 CYS n 1 55 PHE n 1 56 MET n 1 57 TYR n 1 58 SER n 1 59 ASP n 1 60 GLY n 1 61 GLY n 1 62 SER n 1 63 LYS n 1 64 HIS n 1 65 ARG n 1 66 PHE n 1 67 GLU n 1 68 ILE n 1 69 ILE n 1 70 GLU n 1 71 GLY n 1 72 ARG n 1 73 ASP n 1 74 ARG n 1 75 ILE n 1 76 MET n 1 77 ALA n 1 78 TRP n 1 79 THR n 1 80 VAL n 1 81 VAL n 1 82 ASN n 1 83 SER n 1 84 ILE n 1 85 CYS n 1 86 ASN n 1 87 THR n 1 88 THR n 1 89 GLY n 1 90 VAL n 1 91 GLU n 1 92 LYS n 1 93 PRO n 1 94 LYS n 1 95 PHE n 1 96 LEU n 1 97 PRO n 1 98 ASP n 1 99 LEU n 1 100 TYR n 1 101 ASP n 1 102 TYR n 1 103 LYS n 1 104 GLU n 1 105 ASN n 1 106 ARG n 1 107 PHE n 1 108 ILE n 1 109 GLU n 1 110 ILE n 1 111 GLY n 1 112 VAL n 1 113 THR n 1 114 ARG n 1 115 ARG n 1 116 GLU n 1 117 VAL n 1 118 HIS n 1 119 ILE n 1 120 TYR n 1 121 TYR n 1 122 LEU n 1 123 GLU n 1 124 LYS n 1 125 ALA n 1 126 ASN n 1 127 LYS n 1 128 ILE n 1 129 LYS n 1 130 SER n 1 131 GLU n 1 132 LYS n 1 133 THR n 1 134 HIS n 1 135 ILE n 1 136 HIS n 1 137 ILE n 1 138 PHE n 1 139 SER n 1 140 PHE n 1 141 THR n 1 142 GLY n 1 143 GLU n 1 144 GLU n 1 145 MET n 1 146 ALA n 1 147 THR n 1 148 LYS n 1 149 ALA n 1 150 ASP n 1 151 TYR n 1 152 THR n 1 153 LEU n 1 154 ASP n 1 155 GLU n 1 156 GLU n 1 157 SER n 1 158 ARG n 1 159 ALA n 1 160 ARG n 1 161 ILE n 1 162 LYS n 1 163 THR n 1 164 ARG n 1 165 LEU n 1 166 PHE n 1 167 THR n 1 168 ILE n 1 169 ARG n 1 170 GLN n 1 171 GLU n 1 172 MET n 1 173 ALA n 1 174 SER n 1 175 ARG n 1 176 SER n 1 177 LEU n 1 178 TRP n 1 179 ASP n 1 180 SER n 1 181 PHE n 1 182 ARG n 1 183 GLN n 1 184 SER n 1 185 GLU n 1 186 ARG n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 62 ? ? PA ? 'A/California/07/2009(H1N1)' ? ? ? ? 'Influenza A virus (A/California/07/2009(H1N1))' 641809 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample 'Biological sequence' 63 186 ? ? PA ? 'A/California/07/2009(H1N1)' ? ? ? ? 'Influenza A virus (A/California/07/2009(H1N1))' 641809 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 OOH non-polymer . '3,5,6,8-tetrakis(oxidanyl)-2-pentanoyl-naphthalene-1,4-dione' ? 'C15 H14 O7' 306.267 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -8 ? ? ? A . n A 1 2 GLY 2 -7 ? ? ? A . n A 1 3 SER 3 -6 ? ? ? A . n A 1 4 GLY 4 -5 ? ? ? A . n A 1 5 SER 5 -4 ? ? ? A . n A 1 6 GLY 6 -3 ? ? ? A . n A 1 7 SER 7 -2 ? ? ? A . n A 1 8 GLY 8 -1 -1 GLY GLY A . n A 1 9 SER 9 0 0 SER SER A . n A 1 10 MET 10 1 1 MET MET A . n A 1 11 GLU 11 2 2 GLU GLU A . n A 1 12 ASP 12 3 3 ASP ASP A . n A 1 13 PHE 13 4 4 PHE PHE A . n A 1 14 VAL 14 5 5 VAL VAL A . n A 1 15 ARG 15 6 6 ARG ARG A . n A 1 16 GLN 16 7 7 GLN GLN A . n A 1 17 CYS 17 8 8 CYS CYS A . n A 1 18 PHE 18 9 9 PHE PHE A . n A 1 19 ASN 19 10 10 ASN ASN A . n A 1 20 PRO 20 11 11 PRO PRO A . n A 1 21 MET 21 12 12 MET MET A . n A 1 22 ILE 22 13 13 ILE ILE A . n A 1 23 VAL 23 14 14 VAL VAL A . n A 1 24 GLU 24 15 15 GLU GLU A . n A 1 25 LEU 25 16 16 LEU LEU A . n A 1 26 ALA 26 17 17 ALA ALA A . n A 1 27 GLU 27 18 18 GLU GLU A . n A 1 28 LYS 28 19 19 LYS LYS A . n A 1 29 ALA 29 20 20 ALA ALA A . n A 1 30 MET 30 21 21 MET MET A . n A 1 31 LYS 31 22 22 LYS LYS A . n A 1 32 GLU 32 23 23 GLU GLU A . n A 1 33 TYR 33 24 24 TYR TYR A . n A 1 34 GLY 34 25 25 GLY GLY A . n A 1 35 GLU 35 26 26 GLU GLU A . n A 1 36 ASP 36 27 27 ASP ASP A . n A 1 37 PRO 37 28 28 PRO PRO A . n A 1 38 LYS 38 29 29 LYS LYS A . n A 1 39 ILE 39 30 30 ILE ILE A . n A 1 40 GLU 40 31 31 GLU GLU A . n A 1 41 THR 41 32 32 THR THR A . n A 1 42 ASN 42 33 33 ASN ASN A . n A 1 43 LYS 43 34 34 LYS LYS A . n A 1 44 PHE 44 35 35 PHE PHE A . n A 1 45 ALA 45 36 36 ALA ALA A . n A 1 46 ALA 46 37 37 ALA ALA A . n A 1 47 ILE 47 38 38 ILE ILE A . n A 1 48 CYS 48 39 39 CYS CYS A . n A 1 49 THR 49 40 40 THR THR A . n A 1 50 HIS 50 41 41 HIS HIS A . n A 1 51 LEU 51 42 42 LEU LEU A . n A 1 52 GLU 52 43 43 GLU GLU A . n A 1 53 VAL 53 44 44 VAL VAL A . n A 1 54 CYS 54 45 45 CYS CYS A . n A 1 55 PHE 55 46 46 PHE PHE A . n A 1 56 MET 56 47 47 MET MET A . n A 1 57 TYR 57 48 48 TYR TYR A . n A 1 58 SER 58 49 49 SER SER A . n A 1 59 ASP 59 50 50 ASP ASP A . n A 1 60 GLY 60 51 51 GLY GLY A . n A 1 61 GLY 61 52 52 GLY GLY A . n A 1 62 SER 62 53 53 SER SER A . n A 1 63 LYS 63 73 54 LYS LYS A . n A 1 64 HIS 64 74 55 HIS HIS A . n A 1 65 ARG 65 75 56 ARG ARG A . n A 1 66 PHE 66 76 57 PHE PHE A . n A 1 67 GLU 67 77 58 GLU GLU A . n A 1 68 ILE 68 78 59 ILE ILE A . n A 1 69 ILE 69 79 60 ILE ILE A . n A 1 70 GLU 70 80 61 GLU GLU A . n A 1 71 GLY 71 81 62 GLY GLY A . n A 1 72 ARG 72 82 63 ARG ARG A . n A 1 73 ASP 73 83 64 ASP ASP A . n A 1 74 ARG 74 84 65 ARG ARG A . n A 1 75 ILE 75 85 66 ILE ILE A . n A 1 76 MET 76 86 67 MET MET A . n A 1 77 ALA 77 87 68 ALA ALA A . n A 1 78 TRP 78 88 69 TRP TRP A . n A 1 79 THR 79 89 70 THR THR A . n A 1 80 VAL 80 90 71 VAL VAL A . n A 1 81 VAL 81 91 72 VAL VAL A . n A 1 82 ASN 82 92 73 ASN ASN A . n A 1 83 SER 83 93 74 SER SER A . n A 1 84 ILE 84 94 75 ILE ILE A . n A 1 85 CYS 85 95 76 CYS CYS A . n A 1 86 ASN 86 96 77 ASN ASN A . n A 1 87 THR 87 97 78 THR THR A . n A 1 88 THR 88 98 79 THR THR A . n A 1 89 GLY 89 99 80 GLY GLY A . n A 1 90 VAL 90 100 81 VAL VAL A . n A 1 91 GLU 91 101 82 GLU GLU A . n A 1 92 LYS 92 102 83 LYS LYS A . n A 1 93 PRO 93 103 84 PRO PRO A . n A 1 94 LYS 94 104 85 LYS LYS A . n A 1 95 PHE 95 105 86 PHE PHE A . n A 1 96 LEU 96 106 87 LEU LEU A . n A 1 97 PRO 97 107 88 PRO PRO A . n A 1 98 ASP 98 108 89 ASP ASP A . n A 1 99 LEU 99 109 90 LEU LEU A . n A 1 100 TYR 100 110 91 TYR TYR A . n A 1 101 ASP 101 111 92 ASP ASP A . n A 1 102 TYR 102 112 93 TYR TYR A . n A 1 103 LYS 103 113 94 LYS LYS A . n A 1 104 GLU 104 114 95 GLU GLU A . n A 1 105 ASN 105 115 96 ASN ASN A . n A 1 106 ARG 106 116 97 ARG ARG A . n A 1 107 PHE 107 117 98 PHE PHE A . n A 1 108 ILE 108 118 99 ILE ILE A . n A 1 109 GLU 109 119 100 GLU GLU A . n A 1 110 ILE 110 120 101 ILE ILE A . n A 1 111 GLY 111 121 102 GLY GLY A . n A 1 112 VAL 112 122 103 VAL VAL A . n A 1 113 THR 113 123 104 THR THR A . n A 1 114 ARG 114 124 105 ARG ARG A . n A 1 115 ARG 115 125 106 ARG ARG A . n A 1 116 GLU 116 126 107 GLU GLU A . n A 1 117 VAL 117 127 108 VAL VAL A . n A 1 118 HIS 118 128 109 HIS HIS A . n A 1 119 ILE 119 129 110 ILE ILE A . n A 1 120 TYR 120 130 111 TYR TYR A . n A 1 121 TYR 121 131 112 TYR TYR A . n A 1 122 LEU 122 132 113 LEU LEU A . n A 1 123 GLU 123 133 114 GLU GLU A . n A 1 124 LYS 124 134 115 LYS LYS A . n A 1 125 ALA 125 135 116 ALA ALA A . n A 1 126 ASN 126 136 117 ASN ASN A . n A 1 127 LYS 127 137 118 LYS LYS A . n A 1 128 ILE 128 138 119 ILE ILE A . n A 1 129 LYS 129 139 120 LYS LYS A . n A 1 130 SER 130 140 121 SER SER A . n A 1 131 GLU 131 141 122 GLU GLU A . n A 1 132 LYS 132 142 123 LYS LYS A . n A 1 133 THR 133 143 124 THR THR A . n A 1 134 HIS 134 144 125 HIS HIS A . n A 1 135 ILE 135 145 126 ILE ILE A . n A 1 136 HIS 136 146 127 HIS HIS A . n A 1 137 ILE 137 147 128 ILE ILE A . n A 1 138 PHE 138 148 129 PHE PHE A . n A 1 139 SER 139 149 130 SER SER A . n A 1 140 PHE 140 150 131 PHE PHE A . n A 1 141 THR 141 151 132 THR THR A . n A 1 142 GLY 142 152 133 GLY GLY A . n A 1 143 GLU 143 153 134 GLU GLU A . n A 1 144 GLU 144 154 135 GLU GLU A . n A 1 145 MET 145 155 136 MET MET A . n A 1 146 ALA 146 156 137 ALA ALA A . n A 1 147 THR 147 157 138 THR THR A . n A 1 148 LYS 148 158 139 LYS LYS A . n A 1 149 ALA 149 159 140 ALA ALA A . n A 1 150 ASP 150 160 141 ASP ASP A . n A 1 151 TYR 151 161 142 TYR TYR A . n A 1 152 THR 152 162 143 THR THR A . n A 1 153 LEU 153 163 144 LEU LEU A . n A 1 154 ASP 154 164 145 ASP ASP A . n A 1 155 GLU 155 165 146 GLU GLU A . n A 1 156 GLU 156 166 147 GLU GLU A . n A 1 157 SER 157 167 148 SER SER A . n A 1 158 ARG 158 168 149 ARG ARG A . n A 1 159 ALA 159 169 150 ALA ALA A . n A 1 160 ARG 160 170 151 ARG ARG A . n A 1 161 ILE 161 171 152 ILE ILE A . n A 1 162 LYS 162 172 153 LYS LYS A . n A 1 163 THR 163 173 154 THR THR A . n A 1 164 ARG 164 174 155 ARG ARG A . n A 1 165 LEU 165 175 156 LEU LEU A . n A 1 166 PHE 166 176 157 PHE PHE A . n A 1 167 THR 167 177 158 THR THR A . n A 1 168 ILE 168 178 159 ILE ILE A . n A 1 169 ARG 169 179 160 ARG ARG A . n A 1 170 GLN 170 180 161 GLN GLN A . n A 1 171 GLU 171 181 162 GLU GLU A . n A 1 172 MET 172 182 163 MET MET A . n A 1 173 ALA 173 183 164 ALA ALA A . n A 1 174 SER 174 184 165 SER SER A . n A 1 175 ARG 175 185 166 ARG ARG A . n A 1 176 SER 176 186 167 SER SER A . n A 1 177 LEU 177 187 168 LEU LEU A . n A 1 178 TRP 178 188 169 TRP TRP A . n A 1 179 ASP 179 189 170 ASP ASP A . n A 1 180 SER 180 190 171 SER SER A . n A 1 181 PHE 181 191 172 PHE PHE A . n A 1 182 ARG 182 192 173 ARG ARG A . n A 1 183 GLN 183 193 174 GLN GLN A . n A 1 184 SER 184 194 175 SER SER A . n A 1 185 GLU 185 195 176 GLU GLU A . n A 1 186 ARG 186 196 177 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN 1 201 1 MN MN A . C 2 MN 1 202 2 MN MN A . D 3 MG 1 203 1 MG MG A . E 4 CL 1 204 2 CL CL A . F 5 OOH 1 205 1 OOH QB7 A . G 6 HOH 1 301 2 HOH HOH A . G 6 HOH 2 302 1 HOH HOH A . G 6 HOH 3 303 8 HOH HOH A . G 6 HOH 4 304 3 HOH HOH A . G 6 HOH 5 305 4 HOH HOH A . G 6 HOH 6 306 10 HOH HOH A . G 6 HOH 7 307 15 HOH HOH A . G 6 HOH 8 308 13 HOH HOH A . G 6 HOH 9 309 14 HOH HOH A . G 6 HOH 10 310 5 HOH HOH A . G 6 HOH 11 311 19 HOH HOH A . G 6 HOH 12 312 6 HOH HOH A . G 6 HOH 13 313 7 HOH HOH A . G 6 HOH 14 314 17 HOH HOH A . G 6 HOH 15 315 9 HOH HOH A . G 6 HOH 16 316 20 HOH HOH A . G 6 HOH 17 317 18 HOH HOH A . G 6 HOH 18 318 16 HOH HOH A . G 6 HOH 19 319 12 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MET 12 ? CE ? A MET 21 CE 2 1 Y 1 A LYS 29 ? CE ? A LYS 38 CE 3 1 Y 1 A LYS 29 ? NZ ? A LYS 38 NZ 4 1 Y 1 A ILE 30 ? CD1 ? A ILE 39 CD1 5 1 Y 1 A GLU 31 ? OE1 ? A GLU 40 OE1 6 1 Y 1 A ASP 50 ? OD1 ? A ASP 59 OD1 7 1 Y 1 A ASN 96 ? CG ? A ASN 86 CG 8 1 Y 1 A ASN 96 ? OD1 ? A ASN 86 OD1 9 1 Y 1 A ASN 96 ? ND2 ? A ASN 86 ND2 10 1 Y 1 A VAL 100 ? CG1 ? A VAL 90 CG1 11 1 Y 1 A GLU 101 ? OE2 ? A GLU 91 OE2 12 1 Y 1 A LYS 102 ? CD ? A LYS 92 CD 13 1 Y 1 A LYS 102 ? CE ? A LYS 92 CE 14 1 Y 1 A LYS 102 ? NZ ? A LYS 92 NZ 15 1 Y 1 A LYS 104 ? CD ? A LYS 94 CD 16 1 Y 1 A LYS 104 ? CE ? A LYS 94 CE 17 1 Y 1 A LYS 104 ? NZ ? A LYS 94 NZ 18 1 Y 1 A GLU 126 ? CB ? A GLU 116 CB 19 1 Y 1 A GLU 126 ? CG ? A GLU 116 CG 20 1 Y 1 A GLU 126 ? CD ? A GLU 116 CD 21 1 Y 1 A GLU 126 ? OE1 ? A GLU 116 OE1 22 1 Y 1 A GLU 126 ? OE2 ? A GLU 116 OE2 23 1 Y 1 A ILE 129 ? CD1 ? A ILE 119 CD1 24 1 Y 1 A LEU 132 ? CD1 ? A LEU 122 CD1 25 1 Y 1 A ALA 135 ? CB ? A ALA 125 CB 26 1 Y 1 A LYS 137 ? CB ? A LYS 127 CB 27 1 Y 1 A LYS 137 ? CG ? A LYS 127 CG 28 1 Y 1 A LYS 137 ? CD ? A LYS 127 CD 29 1 Y 1 A LYS 137 ? CE ? A LYS 127 CE 30 1 Y 1 A LYS 137 ? NZ ? A LYS 127 NZ 31 1 Y 1 A ILE 138 ? CG2 ? A ILE 128 CG2 32 1 Y 1 A SER 140 ? OG ? A SER 130 OG 33 1 Y 1 A GLU 141 ? CB ? A GLU 131 CB 34 1 Y 1 A GLU 141 ? CG ? A GLU 131 CG 35 1 Y 1 A GLU 141 ? CD ? A GLU 131 CD 36 1 Y 1 A GLU 141 ? OE1 ? A GLU 131 OE1 37 1 Y 1 A GLU 141 ? OE2 ? A GLU 131 OE2 38 1 Y 1 A LYS 142 ? CG ? A LYS 132 CG 39 1 Y 1 A LYS 142 ? CD ? A LYS 132 CD 40 1 Y 1 A LYS 142 ? CE ? A LYS 132 CE 41 1 Y 1 A LYS 142 ? NZ ? A LYS 132 NZ 42 1 Y 1 A GLU 153 ? OE2 ? A GLU 143 OE2 43 1 Y 1 A LYS 158 ? CE ? A LYS 148 CE 44 1 Y 1 A LYS 158 ? NZ ? A LYS 148 NZ 45 1 Y 1 A GLU 165 ? OE1 ? A GLU 155 OE1 46 1 Y 1 A GLU 166 ? OE2 ? A GLU 156 OE2 47 1 Y 1 A ARG 170 ? CG ? A ARG 160 CG 48 1 Y 1 A ARG 170 ? CD ? A ARG 160 CD 49 1 Y 1 A ARG 170 ? NE ? A ARG 160 NE 50 1 Y 1 A ARG 170 ? CZ ? A ARG 160 CZ 51 1 Y 1 A ARG 170 ? NH1 ? A ARG 160 NH1 52 1 Y 1 A ARG 170 ? NH2 ? A ARG 160 NH2 53 1 Y 1 A THR 177 ? CG2 ? A THR 167 CG2 54 1 Y 1 A GLN 180 ? OE1 ? A GLN 170 OE1 55 1 Y 1 A ARG 185 ? NH1 ? A ARG 175 NH1 56 1 Y 1 A ASP 189 ? CB ? A ASP 179 CB 57 1 Y 1 A ASP 189 ? CG ? A ASP 179 CG 58 1 Y 1 A ASP 189 ? OD1 ? A ASP 179 OD1 59 1 Y 1 A ASP 189 ? OD2 ? A ASP 179 OD2 60 1 Y 1 A ARG 196 ? NE ? A ARG 186 NE 61 1 Y 1 A ARG 196 ? CZ ? A ARG 186 CZ 62 1 Y 1 A ARG 196 ? NH1 ? A ARG 186 NH1 63 1 Y 1 A ARG 196 ? NH2 ? A ARG 186 NH2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0103 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 6YEM _cell.details ? _cell.formula_units_Z ? _cell.length_a 73.340 _cell.length_a_esd ? _cell.length_b 73.340 _cell.length_b_esd ? _cell.length_c 128.750 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YEM _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6YEM _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.31 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.74 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'MDP, PEG 1000, PEG 3350, Sodium HEPES, MOPS (acid), Magnesium chloride, Calcium chloride' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 300K' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-03-06 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54187 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.54187 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate 67.737 _reflns.entry_id 6YEM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.500 _reflns.d_resolution_low 45.210 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13432 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.700 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.671 _reflns.pdbx_Rmerge_I_obs 0.095 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.410 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.161 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.107 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 62747 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 2.500 2.650 ? 0.620 ? 5655 2182 ? 2179 99.900 ? ? ? ? 1.304 ? ? ? ? ? ? ? ? 2.595 ? ? ? ? 1.659 ? ? 1 1 0.329 ? ? 2.650 2.830 ? 1.070 ? 7531 2041 ? 2040 100.000 ? ? ? ? 0.967 ? ? ? ? ? ? ? ? 3.692 ? ? ? ? 1.135 ? ? 2 1 0.561 ? ? 2.830 3.060 ? 2.730 ? 9501 1905 ? 1905 100.000 ? ? ? ? 0.491 ? ? ? ? ? ? ? ? 4.987 ? ? ? ? 0.550 ? ? 3 1 0.847 ? ? 3.060 3.350 ? 5.380 ? 10443 1756 ? 1756 100.000 ? ? ? ? 0.293 ? ? ? ? ? ? ? ? 5.947 ? ? ? ? 0.321 ? ? 4 1 0.960 ? ? 3.350 3.740 ? 11.910 ? 8875 1561 ? 1561 100.000 ? ? ? ? 0.136 ? ? ? ? ? ? ? ? 5.685 ? ? ? ? 0.150 ? ? 5 1 0.987 ? ? 3.740 4.310 ? 19.720 ? 6871 1409 ? 1401 99.400 ? ? ? ? 0.072 ? ? ? ? ? ? ? ? 4.904 ? ? ? ? 0.080 ? ? 6 1 0.995 ? ? 4.310 5.270 ? 27.410 ? 6313 1180 ? 1173 99.400 ? ? ? ? 0.051 ? ? ? ? ? ? ? ? 5.382 ? ? ? ? 0.057 ? ? 7 1 0.998 ? ? 5.270 7.400 ? 26.960 ? 5100 914 ? 913 99.900 ? ? ? ? 0.051 ? ? ? ? ? ? ? ? 5.586 ? ? ? ? 0.057 ? ? 8 1 0.998 ? ? 7.400 45.210 ? 36.980 ? 2458 524 ? 504 96.200 ? ? ? ? 0.034 ? ? ? ? ? ? ? ? 4.877 ? ? ? ? 0.038 ? ? 9 1 0.999 ? ? # _refine.aniso_B[1][1] -0.1000 _refine.aniso_B[1][2] -0.0500 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][2] -0.1000 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 0.3400 _refine.B_iso_max 141.280 _refine.B_iso_mean 75.5280 _refine.B_iso_min 43.300 _refine.correlation_coeff_Fo_to_Fc 0.9310 _refine.correlation_coeff_Fo_to_Fc_free 0.8980 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6YEM _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.5000 _refine.ls_d_res_low 45.2100 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7223 _refine.ls_number_reflns_R_free 381 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.6700 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2640 _refine.ls_R_factor_R_free 0.3180 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2612 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6YA5 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.6980 _refine.pdbx_overall_ESU_R_Free 0.3650 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 15.7590 _refine.overall_SU_ML 0.3270 _refine.overall_SU_R_Cruickshank_DPI 0.6978 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.5000 _refine_hist.d_res_low 45.2100 _refine_hist.number_atoms_solvent 19 _refine_hist.number_atoms_total 1461 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 179 _refine_hist.pdbx_B_iso_mean_ligand 73.50 _refine_hist.pdbx_B_iso_mean_solvent 59.59 _refine_hist.pdbx_number_atoms_protein 1416 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 0.019 1481 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 1341 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.248 1.954 1989 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.923 3.000 3078 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.837 5.000 180 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 34.317 22.714 70 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 17.201 15.000 257 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 15.885 15.000 13 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.066 0.200 206 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 0.020 1660 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 358 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.5 _refine_ls_shell.d_res_low 2.5630 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 27 _refine_ls_shell.number_reflns_R_work 515 _refine_ls_shell.percent_reflns_obs 99.8200 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3930 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2890 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6YEM _struct.title 'H1N1 2009 PA Endonuclease in complex with Quambalarine B' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6YEM _struct_keywords.text 'Influenza, polymerase, endonuclease, hydrolase, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP C3W5X6_9INFA C3W5X6 ? 1 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 1 2 UNP C3W5X6_9INFA C3W5X6 ? 1 ;KHRFEIIEGRDRIMAWTVVNSICNTTGVEKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSFTG EEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSER ; 73 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6YEM A 10 ? 59 ? C3W5X6 1 ? 50 ? 1 50 2 2 6YEM A 63 ? 186 ? C3W5X6 73 ? 196 ? 73 196 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6YEM SER A 1 ? UNP C3W5X6 ? ? 'expression tag' -8 1 1 6YEM GLY A 2 ? UNP C3W5X6 ? ? 'expression tag' -7 2 1 6YEM SER A 3 ? UNP C3W5X6 ? ? 'expression tag' -6 3 1 6YEM GLY A 4 ? UNP C3W5X6 ? ? 'expression tag' -5 4 1 6YEM SER A 5 ? UNP C3W5X6 ? ? 'expression tag' -4 5 1 6YEM GLY A 6 ? UNP C3W5X6 ? ? 'expression tag' -3 6 1 6YEM SER A 7 ? UNP C3W5X6 ? ? 'expression tag' -2 7 1 6YEM GLY A 8 ? UNP C3W5X6 ? ? 'expression tag' -1 8 1 6YEM SER A 9 ? UNP C3W5X6 ? ? 'expression tag' 0 9 1 6YEM GLY A 60 ? UNP C3W5X6 ? ? linker 51 10 1 6YEM GLY A 61 ? UNP C3W5X6 ? ? linker 52 11 1 6YEM SER A 62 ? UNP C3W5X6 ? ? linker 53 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 370 ? 1 MORE -21 ? 1 'SSA (A^2)' 9620 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 8 ? PHE A 18 ? GLY A -1 PHE A 9 1 ? 11 HELX_P HELX_P2 AA2 ASN A 19 ? GLU A 32 ? ASN A 10 GLU A 23 1 ? 14 HELX_P HELX_P3 AA3 GLU A 40 ? GLY A 60 ? GLU A 31 GLY A 51 1 ? 21 HELX_P HELX_P4 AA4 ASP A 73 ? THR A 88 ? ASP A 83 THR A 98 1 ? 16 HELX_P HELX_P5 AA5 GLU A 116 ? LYS A 129 ? GLU A 126 LYS A 139 1 ? 14 HELX_P HELX_P6 AA6 LYS A 148 ? ASP A 150 ? LYS A 158 ASP A 160 5 ? 3 HELX_P HELX_P7 AA7 ASP A 154 ? ARG A 175 ? ASP A 164 ARG A 185 1 ? 22 HELX_P HELX_P8 AA8 LEU A 177 ? SER A 184 ? LEU A 187 SER A 194 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 50 NE2 ? ? ? 1_555 B MN . MN ? ? A HIS 41 A MN 201 1_555 ? ? ? ? ? ? ? 2.537 ? ? metalc2 metalc ? ? A ASP 98 OD2 ? ? ? 1_555 B MN . MN ? ? A ASP 108 A MN 201 1_555 ? ? ? ? ? ? ? 1.969 ? ? metalc3 metalc ? ? A ASP 98 OD1 ? ? ? 1_555 C MN . MN ? ? A ASP 108 A MN 202 1_555 ? ? ? ? ? ? ? 1.985 ? ? metalc4 metalc ? ? A ILE 110 O ? ? ? 1_555 B MN . MN ? ? A ILE 120 A MN 201 1_555 ? ? ? ? ? ? ? 2.078 ? ? metalc5 metalc ? ? B MN . MN ? ? ? 1_555 F OOH . O ? ? A MN 201 A OOH 205 1_555 ? ? ? ? ? ? ? 1.994 ? ? metalc6 metalc ? ? B MN . MN ? ? ? 1_555 F OOH . O6 ? ? A MN 201 A OOH 205 1_555 ? ? ? ? ? ? ? 1.862 ? ? metalc7 metalc ? ? C MN . MN ? ? ? 1_555 F OOH . O1 ? ? A MN 202 A OOH 205 1_555 ? ? ? ? ? ? ? 1.986 ? ? metalc8 metalc ? ? C MN . MN ? ? ? 1_555 F OOH . O ? ? A MN 202 A OOH 205 1_555 ? ? ? ? ? ? ? 2.298 ? ? metalc9 metalc ? ? C MN . MN ? ? ? 1_555 G HOH . O ? ? A MN 202 A HOH 301 1_555 ? ? ? ? ? ? ? 2.110 ? ? metalc10 metalc ? ? C MN . MN ? ? ? 1_555 G HOH . O ? ? A MN 202 A HOH 302 1_555 ? ? ? ? ? ? ? 2.282 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 50 ? A HIS 41 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 OD2 ? A ASP 98 ? A ASP 108 ? 1_555 97.3 ? 2 NE2 ? A HIS 50 ? A HIS 41 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O ? A ILE 110 ? A ILE 120 ? 1_555 90.1 ? 3 OD2 ? A ASP 98 ? A ASP 108 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O ? A ILE 110 ? A ILE 120 ? 1_555 102.1 ? 4 NE2 ? A HIS 50 ? A HIS 41 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O ? F OOH . ? A OOH 205 ? 1_555 80.6 ? 5 OD2 ? A ASP 98 ? A ASP 108 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O ? F OOH . ? A OOH 205 ? 1_555 97.7 ? 6 O ? A ILE 110 ? A ILE 120 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O ? F OOH . ? A OOH 205 ? 1_555 159.1 ? 7 NE2 ? A HIS 50 ? A HIS 41 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O6 ? F OOH . ? A OOH 205 ? 1_555 81.6 ? 8 OD2 ? A ASP 98 ? A ASP 108 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O6 ? F OOH . ? A OOH 205 ? 1_555 171.0 ? 9 O ? A ILE 110 ? A ILE 120 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O6 ? F OOH . ? A OOH 205 ? 1_555 69.0 ? 10 O ? F OOH . ? A OOH 205 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O6 ? F OOH . ? A OOH 205 ? 1_555 91.0 ? 11 OD1 ? A ASP 98 ? A ASP 108 ? 1_555 MN ? C MN . ? A MN 202 ? 1_555 O1 ? F OOH . ? A OOH 205 ? 1_555 160.5 ? 12 OD1 ? A ASP 98 ? A ASP 108 ? 1_555 MN ? C MN . ? A MN 202 ? 1_555 O ? F OOH . ? A OOH 205 ? 1_555 89.0 ? 13 O1 ? F OOH . ? A OOH 205 ? 1_555 MN ? C MN . ? A MN 202 ? 1_555 O ? F OOH . ? A OOH 205 ? 1_555 73.6 ? 14 OD1 ? A ASP 98 ? A ASP 108 ? 1_555 MN ? C MN . ? A MN 202 ? 1_555 O ? G HOH . ? A HOH 301 ? 1_555 88.5 ? 15 O1 ? F OOH . ? A OOH 205 ? 1_555 MN ? C MN . ? A MN 202 ? 1_555 O ? G HOH . ? A HOH 301 ? 1_555 83.5 ? 16 O ? F OOH . ? A OOH 205 ? 1_555 MN ? C MN . ? A MN 202 ? 1_555 O ? G HOH . ? A HOH 301 ? 1_555 91.7 ? 17 OD1 ? A ASP 98 ? A ASP 108 ? 1_555 MN ? C MN . ? A MN 202 ? 1_555 O ? G HOH . ? A HOH 302 ? 1_555 87.9 ? 18 O1 ? F OOH . ? A OOH 205 ? 1_555 MN ? C MN . ? A MN 202 ? 1_555 O ? G HOH . ? A HOH 302 ? 1_555 106.7 ? 19 O ? F OOH . ? A OOH 205 ? 1_555 MN ? C MN . ? A MN 202 ? 1_555 O ? G HOH . ? A HOH 302 ? 1_555 165.5 ? 20 O ? G HOH . ? A HOH 301 ? 1_555 MN ? C MN . ? A MN 202 ? 1_555 O ? G HOH . ? A HOH 302 ? 1_555 74.1 ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 66 ? ILE A 68 ? PHE A 76 ILE A 78 AA1 2 LEU A 99 ? ASP A 101 ? LEU A 109 ASP A 111 AA1 3 ARG A 106 ? THR A 113 ? ARG A 116 THR A 123 AA1 4 HIS A 134 ? SER A 139 ? HIS A 144 SER A 149 AA1 5 GLU A 144 ? ALA A 146 ? GLU A 154 ALA A 156 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 67 ? N GLU A 77 O TYR A 100 ? O TYR A 110 AA1 2 3 N ASP A 101 ? N ASP A 111 O ARG A 106 ? O ARG A 116 AA1 3 4 N GLU A 109 ? N GLU A 119 O HIS A 134 ? O HIS A 144 AA1 4 5 N ILE A 137 ? N ILE A 147 O MET A 145 ? O MET A 155 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MN 201 ? 5 'binding site for residue MN A 201' AC2 Software A MN 202 ? 6 'binding site for residue MN A 202' AC3 Software A CL 204 ? 2 'binding site for residue CL A 204' AC4 Software A OOH 205 ? 11 'binding site for residue OOH A 205' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 50 ? HIS A 41 . ? 1_555 ? 2 AC1 5 ASP A 98 ? ASP A 108 . ? 1_555 ? 3 AC1 5 GLU A 109 ? GLU A 119 . ? 1_555 ? 4 AC1 5 ILE A 110 ? ILE A 120 . ? 1_555 ? 5 AC1 5 OOH F . ? OOH A 205 . ? 1_555 ? 6 AC2 6 HIS A 50 ? HIS A 41 . ? 1_555 ? 7 AC2 6 GLU A 70 ? GLU A 80 . ? 1_555 ? 8 AC2 6 ASP A 98 ? ASP A 108 . ? 1_555 ? 9 AC2 6 OOH F . ? OOH A 205 . ? 1_555 ? 10 AC2 6 HOH G . ? HOH A 301 . ? 1_555 ? 11 AC2 6 HOH G . ? HOH A 302 . ? 1_555 ? 12 AC3 2 GLN A 16 ? GLN A 7 . ? 1_555 ? 13 AC3 2 PHE A 18 ? PHE A 9 . ? 1_555 ? 14 AC4 11 HIS A 50 ? HIS A 41 . ? 1_555 ? 15 AC4 11 GLU A 70 ? GLU A 80 . ? 1_555 ? 16 AC4 11 ASP A 98 ? ASP A 108 . ? 1_555 ? 17 AC4 11 GLU A 109 ? GLU A 119 . ? 1_555 ? 18 AC4 11 ILE A 110 ? ILE A 120 . ? 1_555 ? 19 AC4 11 GLY A 111 ? GLY A 121 . ? 1_555 ? 20 AC4 11 TYR A 120 ? TYR A 130 . ? 1_555 ? 21 AC4 11 LYS A 124 ? LYS A 134 . ? 1_555 ? 22 AC4 11 MN B . ? MN A 201 . ? 1_555 ? 23 AC4 11 MN C . ? MN A 202 . ? 1_555 ? 24 AC4 11 HOH G . ? HOH A 301 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 80 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 MN _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 MN _pdbx_validate_close_contact.auth_seq_id_2 202 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.69 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 125 ? ? -92.89 -157.87 2 1 LYS A 139 ? ? 62.65 -77.57 3 1 SER A 140 ? ? -24.12 97.69 4 1 THR A 162 ? ? 65.50 -69.20 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 303 ? G HOH . 2 1 A HOH 315 ? G HOH . # _pdbx_entry_details.entry_id 6YEM _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -8 ? A SER 1 2 1 Y 1 A GLY -7 ? A GLY 2 3 1 Y 1 A SER -6 ? A SER 3 4 1 Y 1 A GLY -5 ? A GLY 4 5 1 Y 1 A SER -4 ? A SER 5 6 1 Y 1 A GLY -3 ? A GLY 6 7 1 Y 1 A SER -2 ? A SER 7 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 MG MG MG N N 251 MN MN MN N N 252 OOH O6 O N N 253 OOH C C Y N 254 OOH O O N N 255 OOH C1 C Y N 256 OOH C2 C Y N 257 OOH C3 C Y N 258 OOH O1 O N N 259 OOH C4 C Y N 260 OOH O5 O N N 261 OOH C14 C N N 262 OOH C13 C N N 263 OOH C6 C N N 264 OOH C5 C Y N 265 OOH C8 C N N 266 OOH C7 C N N 267 OOH C9 C N N 268 OOH O2 O N N 269 OOH C10 C N N 270 OOH C11 C N N 271 OOH C12 C N N 272 OOH O3 O N N 273 OOH O4 O N N 274 OOH H1 H N N 275 OOH H2 H N N 276 OOH H3 H N N 277 OOH H4 H N N 278 OOH H5 H N N 279 OOH H6 H N N 280 OOH H7 H N N 281 OOH H8 H N N 282 OOH H9 H N N 283 OOH H10 H N N 284 OOH H11 H N N 285 OOH H12 H N N 286 OOH H13 H N N 287 OOH H14 H N N 288 PHE N N N N 289 PHE CA C N S 290 PHE C C N N 291 PHE O O N N 292 PHE CB C N N 293 PHE CG C Y N 294 PHE CD1 C Y N 295 PHE CD2 C Y N 296 PHE CE1 C Y N 297 PHE CE2 C Y N 298 PHE CZ C Y N 299 PHE OXT O N N 300 PHE H H N N 301 PHE H2 H N N 302 PHE HA H N N 303 PHE HB2 H N N 304 PHE HB3 H N N 305 PHE HD1 H N N 306 PHE HD2 H N N 307 PHE HE1 H N N 308 PHE HE2 H N N 309 PHE HZ H N N 310 PHE HXT H N N 311 PRO N N N N 312 PRO CA C N S 313 PRO C C N N 314 PRO O O N N 315 PRO CB C N N 316 PRO CG C N N 317 PRO CD C N N 318 PRO OXT O N N 319 PRO H H N N 320 PRO HA H N N 321 PRO HB2 H N N 322 PRO HB3 H N N 323 PRO HG2 H N N 324 PRO HG3 H N N 325 PRO HD2 H N N 326 PRO HD3 H N N 327 PRO HXT H N N 328 SER N N N N 329 SER CA C N S 330 SER C C N N 331 SER O O N N 332 SER CB C N N 333 SER OG O N N 334 SER OXT O N N 335 SER H H N N 336 SER H2 H N N 337 SER HA H N N 338 SER HB2 H N N 339 SER HB3 H N N 340 SER HG H N N 341 SER HXT H N N 342 THR N N N N 343 THR CA C N S 344 THR C C N N 345 THR O O N N 346 THR CB C N R 347 THR OG1 O N N 348 THR CG2 C N N 349 THR OXT O N N 350 THR H H N N 351 THR H2 H N N 352 THR HA H N N 353 THR HB H N N 354 THR HG1 H N N 355 THR HG21 H N N 356 THR HG22 H N N 357 THR HG23 H N N 358 THR HXT H N N 359 TRP N N N N 360 TRP CA C N S 361 TRP C C N N 362 TRP O O N N 363 TRP CB C N N 364 TRP CG C Y N 365 TRP CD1 C Y N 366 TRP CD2 C Y N 367 TRP NE1 N Y N 368 TRP CE2 C Y N 369 TRP CE3 C Y N 370 TRP CZ2 C Y N 371 TRP CZ3 C Y N 372 TRP CH2 C Y N 373 TRP OXT O N N 374 TRP H H N N 375 TRP H2 H N N 376 TRP HA H N N 377 TRP HB2 H N N 378 TRP HB3 H N N 379 TRP HD1 H N N 380 TRP HE1 H N N 381 TRP HE3 H N N 382 TRP HZ2 H N N 383 TRP HZ3 H N N 384 TRP HH2 H N N 385 TRP HXT H N N 386 TYR N N N N 387 TYR CA C N S 388 TYR C C N N 389 TYR O O N N 390 TYR CB C N N 391 TYR CG C Y N 392 TYR CD1 C Y N 393 TYR CD2 C Y N 394 TYR CE1 C Y N 395 TYR CE2 C Y N 396 TYR CZ C Y N 397 TYR OH O N N 398 TYR OXT O N N 399 TYR H H N N 400 TYR H2 H N N 401 TYR HA H N N 402 TYR HB2 H N N 403 TYR HB3 H N N 404 TYR HD1 H N N 405 TYR HD2 H N N 406 TYR HE1 H N N 407 TYR HE2 H N N 408 TYR HH H N N 409 TYR HXT H N N 410 VAL N N N N 411 VAL CA C N S 412 VAL C C N N 413 VAL O O N N 414 VAL CB C N N 415 VAL CG1 C N N 416 VAL CG2 C N N 417 VAL OXT O N N 418 VAL H H N N 419 VAL H2 H N N 420 VAL HA H N N 421 VAL HB H N N 422 VAL HG11 H N N 423 VAL HG12 H N N 424 VAL HG13 H N N 425 VAL HG21 H N N 426 VAL HG22 H N N 427 VAL HG23 H N N 428 VAL HXT H N N 429 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 OOH O4 C7 sing N N 237 OOH O1 C6 doub N N 238 OOH C11 C12 sing N N 239 OOH C11 C10 sing N N 240 OOH C13 C12 sing N N 241 OOH C13 C14 sing N N 242 OOH C7 C6 sing N N 243 OOH C7 C8 doub N N 244 OOH C6 C4 sing N N 245 OOH O C5 sing N N 246 OOH C10 C8 sing N N 247 OOH C10 O3 doub N N 248 OOH C8 C9 sing N N 249 OOH C4 C5 doub Y N 250 OOH C4 C3 sing Y N 251 OOH C5 C sing Y N 252 OOH C9 C3 sing N N 253 OOH C9 O2 doub N N 254 OOH C3 C2 doub Y N 255 OOH C O6 sing N N 256 OOH C C1 doub Y N 257 OOH C2 C1 sing Y N 258 OOH C2 O5 sing N N 259 OOH O6 H1 sing N N 260 OOH O H2 sing N N 261 OOH C1 H3 sing N N 262 OOH O5 H4 sing N N 263 OOH C14 H5 sing N N 264 OOH C14 H6 sing N N 265 OOH C14 H7 sing N N 266 OOH C13 H8 sing N N 267 OOH C13 H9 sing N N 268 OOH C11 H10 sing N N 269 OOH C11 H11 sing N N 270 OOH C12 H12 sing N N 271 OOH C12 H13 sing N N 272 OOH O4 H14 sing N N 273 PHE N CA sing N N 274 PHE N H sing N N 275 PHE N H2 sing N N 276 PHE CA C sing N N 277 PHE CA CB sing N N 278 PHE CA HA sing N N 279 PHE C O doub N N 280 PHE C OXT sing N N 281 PHE CB CG sing N N 282 PHE CB HB2 sing N N 283 PHE CB HB3 sing N N 284 PHE CG CD1 doub Y N 285 PHE CG CD2 sing Y N 286 PHE CD1 CE1 sing Y N 287 PHE CD1 HD1 sing N N 288 PHE CD2 CE2 doub Y N 289 PHE CD2 HD2 sing N N 290 PHE CE1 CZ doub Y N 291 PHE CE1 HE1 sing N N 292 PHE CE2 CZ sing Y N 293 PHE CE2 HE2 sing N N 294 PHE CZ HZ sing N N 295 PHE OXT HXT sing N N 296 PRO N CA sing N N 297 PRO N CD sing N N 298 PRO N H sing N N 299 PRO CA C sing N N 300 PRO CA CB sing N N 301 PRO CA HA sing N N 302 PRO C O doub N N 303 PRO C OXT sing N N 304 PRO CB CG sing N N 305 PRO CB HB2 sing N N 306 PRO CB HB3 sing N N 307 PRO CG CD sing N N 308 PRO CG HG2 sing N N 309 PRO CG HG3 sing N N 310 PRO CD HD2 sing N N 311 PRO CD HD3 sing N N 312 PRO OXT HXT sing N N 313 SER N CA sing N N 314 SER N H sing N N 315 SER N H2 sing N N 316 SER CA C sing N N 317 SER CA CB sing N N 318 SER CA HA sing N N 319 SER C O doub N N 320 SER C OXT sing N N 321 SER CB OG sing N N 322 SER CB HB2 sing N N 323 SER CB HB3 sing N N 324 SER OG HG sing N N 325 SER OXT HXT sing N N 326 THR N CA sing N N 327 THR N H sing N N 328 THR N H2 sing N N 329 THR CA C sing N N 330 THR CA CB sing N N 331 THR CA HA sing N N 332 THR C O doub N N 333 THR C OXT sing N N 334 THR CB OG1 sing N N 335 THR CB CG2 sing N N 336 THR CB HB sing N N 337 THR OG1 HG1 sing N N 338 THR CG2 HG21 sing N N 339 THR CG2 HG22 sing N N 340 THR CG2 HG23 sing N N 341 THR OXT HXT sing N N 342 TRP N CA sing N N 343 TRP N H sing N N 344 TRP N H2 sing N N 345 TRP CA C sing N N 346 TRP CA CB sing N N 347 TRP CA HA sing N N 348 TRP C O doub N N 349 TRP C OXT sing N N 350 TRP CB CG sing N N 351 TRP CB HB2 sing N N 352 TRP CB HB3 sing N N 353 TRP CG CD1 doub Y N 354 TRP CG CD2 sing Y N 355 TRP CD1 NE1 sing Y N 356 TRP CD1 HD1 sing N N 357 TRP CD2 CE2 doub Y N 358 TRP CD2 CE3 sing Y N 359 TRP NE1 CE2 sing Y N 360 TRP NE1 HE1 sing N N 361 TRP CE2 CZ2 sing Y N 362 TRP CE3 CZ3 doub Y N 363 TRP CE3 HE3 sing N N 364 TRP CZ2 CH2 doub Y N 365 TRP CZ2 HZ2 sing N N 366 TRP CZ3 CH2 sing Y N 367 TRP CZ3 HZ3 sing N N 368 TRP CH2 HH2 sing N N 369 TRP OXT HXT sing N N 370 TYR N CA sing N N 371 TYR N H sing N N 372 TYR N H2 sing N N 373 TYR CA C sing N N 374 TYR CA CB sing N N 375 TYR CA HA sing N N 376 TYR C O doub N N 377 TYR C OXT sing N N 378 TYR CB CG sing N N 379 TYR CB HB2 sing N N 380 TYR CB HB3 sing N N 381 TYR CG CD1 doub Y N 382 TYR CG CD2 sing Y N 383 TYR CD1 CE1 sing Y N 384 TYR CD1 HD1 sing N N 385 TYR CD2 CE2 doub Y N 386 TYR CD2 HD2 sing N N 387 TYR CE1 CZ doub Y N 388 TYR CE1 HE1 sing N N 389 TYR CE2 CZ sing Y N 390 TYR CE2 HE2 sing N N 391 TYR CZ OH sing N N 392 TYR OH HH sing N N 393 TYR OXT HXT sing N N 394 VAL N CA sing N N 395 VAL N H sing N N 396 VAL N H2 sing N N 397 VAL CA C sing N N 398 VAL CA CB sing N N 399 VAL CA HA sing N N 400 VAL C O doub N N 401 VAL C OXT sing N N 402 VAL CB CG1 sing N N 403 VAL CB CG2 sing N N 404 VAL CB HB sing N N 405 VAL CG1 HG11 sing N N 406 VAL CG1 HG12 sing N N 407 VAL CG1 HG13 sing N N 408 VAL CG2 HG21 sing N N 409 VAL CG2 HG22 sing N N 410 VAL CG2 HG23 sing N N 411 VAL OXT HXT sing N N 412 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Ministry of Education (MoE, Czech Republic)' 'Czech Republic' LM2015064 1 'European Regional Development Fund' 'Czech Republic' CZ.02.1.01/0.0/0.0/16_019/0000729 2 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id OOH _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id OOH _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6YA5 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6YEM _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.013635 _atom_sites.fract_transf_matrix[1][2] 0.007872 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015744 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007767 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CL MG MN N O S # loop_