HEADER VIRAL PROTEIN 26-MAR-20 6YFI TITLE BACTERIOPHAGE EMS014 COAT PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: COAT PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEVIVIRIDAE SP.; SOURCE 3 ORGANISM_TAXID: 2027243; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS VIRUS, STRUCTURAL PROTEIN, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.RUMNIEKS,G.KALNINS,M.SISOVS,I.LIEKNINA,K.TARS REVDAT 3 01-MAY-24 6YFI 1 REMARK REVDAT 2 16-DEC-20 6YFI 1 JRNL REVDAT 1 02-SEP-20 6YFI 0 JRNL AUTH J.RUMNIEKS,I.LIEKNINA,G.KALNINS,M.SISOVS,I.AKOPJANA, JRNL AUTH 2 J.BOGANS,K.TARS JRNL TITL THREE-DIMENSIONAL STRUCTURE OF 22 UNCULTURED SSRNA JRNL TITL 2 BACTERIOPHAGES: FLEXIBILITY OF THE COAT PROTEIN FOLD AND JRNL TITL 3 VARIATIONS IN PARTICLE SHAPES. JRNL REF SCI ADV V. 6 2020 JRNL REFN ESSN 2375-2548 JRNL PMID 32917600 JRNL DOI 10.1126/SCIADV.ABC0023 REMARK 2 REMARK 2 RESOLUTION. 1.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.21 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 172802 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 8618 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.2100 - 3.8770 1.00 5868 315 0.1606 0.1654 REMARK 3 2 3.8770 - 3.0776 1.00 5670 294 0.1600 0.1753 REMARK 3 3 3.0776 - 2.6886 1.00 5627 296 0.1729 0.1970 REMARK 3 4 2.6886 - 2.4428 1.00 5586 294 0.1739 0.1961 REMARK 3 5 2.4428 - 2.2678 1.00 5582 291 0.1656 0.1913 REMARK 3 6 2.2678 - 2.1341 1.00 5563 298 0.1547 0.1790 REMARK 3 7 2.1341 - 2.0272 1.00 5574 282 0.1583 0.1839 REMARK 3 8 2.0272 - 1.9389 1.00 5519 304 0.1569 0.1870 REMARK 3 9 1.9389 - 1.8643 1.00 5534 290 0.1630 0.1954 REMARK 3 10 1.8643 - 1.8000 1.00 5514 286 0.1564 0.1802 REMARK 3 11 1.8000 - 1.7437 1.00 5515 284 0.1543 0.1838 REMARK 3 12 1.7437 - 1.6938 1.00 5503 300 0.1420 0.1721 REMARK 3 13 1.6938 - 1.6493 1.00 5532 285 0.1500 0.1932 REMARK 3 14 1.6493 - 1.6090 1.00 5506 282 0.1540 0.2068 REMARK 3 15 1.6090 - 1.5724 1.00 5511 294 0.1524 0.1917 REMARK 3 16 1.5724 - 1.5390 1.00 5483 279 0.1570 0.2010 REMARK 3 17 1.5390 - 1.5082 0.99 5455 291 0.1849 0.2401 REMARK 3 18 1.5082 - 1.4797 1.00 5490 304 0.1912 0.2191 REMARK 3 19 1.4797 - 1.4533 1.00 5484 294 0.2099 0.2427 REMARK 3 20 1.4533 - 1.4287 1.00 5442 293 0.2136 0.2550 REMARK 3 21 1.4287 - 1.4056 0.99 5506 273 0.2271 0.2702 REMARK 3 22 1.4056 - 1.3840 1.00 5464 300 0.2380 0.2662 REMARK 3 23 1.3840 - 1.3636 1.00 5475 291 0.2500 0.2578 REMARK 3 24 1.3636 - 1.3444 1.00 5481 277 0.2774 0.3154 REMARK 3 25 1.3444 - 1.3263 1.00 5478 283 0.2914 0.3191 REMARK 3 26 1.3263 - 1.3090 0.99 5462 293 0.3187 0.3563 REMARK 3 27 1.3090 - 1.2927 0.99 5488 269 0.3381 0.3492 REMARK 3 28 1.2927 - 1.2771 0.99 5413 303 0.3488 0.3807 REMARK 3 29 1.2771 - 1.2622 1.00 5492 272 0.3621 0.3476 REMARK 3 30 1.2622 - 1.2481 0.72 3967 201 0.4086 0.4275 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.800 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.59 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6YFI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1292106857. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : DCM SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 173301 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.248 REMARK 200 RESOLUTION RANGE LOW (A) : 48.615 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.405 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.5100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.04 REMARK 200 R MERGE FOR SHELL (I) : 1.05400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.030 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: POLY(ALA) MODEL OF ESE021 CP DIMER REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 8000, 0.1 M SODIUM CHLORIDE, REMARK 280 0.05 M PHOSPHATE/CITRATE PH 4.2, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.77900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.40950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.34950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.40950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.77900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.34950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -69.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 75 REMARK 465 GLY A 76 REMARK 465 GLY A 77 REMARK 465 ALA A 78 REMARK 465 TYR A 79 REMARK 465 THR B 72 REMARK 465 ALA B 73 REMARK 465 GLY B 74 REMARK 465 ALA B 75 REMARK 465 GLY B 76 REMARK 465 GLY B 77 REMARK 465 ALA B 78 REMARK 465 TYR B 79 REMARK 465 VAL B 80 REMARK 465 ALA B 81 REMARK 465 PRO B 82 REMARK 465 THR C 72 REMARK 465 ALA C 73 REMARK 465 GLY C 74 REMARK 465 ALA C 75 REMARK 465 GLY C 76 REMARK 465 GLY C 77 REMARK 465 ALA C 78 REMARK 465 TYR C 79 REMARK 465 VAL C 80 REMARK 465 ALA C 81 REMARK 465 PRO C 82 REMARK 465 ALA D 75 REMARK 465 GLY D 76 REMARK 465 GLY D 77 REMARK 465 ALA D 78 REMARK 465 TYR D 79 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 393 O HOH D 468 1.68 REMARK 500 OE2 GLU B 71 O HOH B 201 1.80 REMARK 500 O HOH A 363 O HOH A 390 1.81 REMARK 500 O HOH B 351 O HOH B 364 1.84 REMARK 500 O HOH A 370 O HOH A 388 1.84 REMARK 500 O HOH B 338 O HOH B 372 1.84 REMARK 500 O HOH A 293 O HOH B 354 1.90 REMARK 500 NH1 ARG D 53 O HOH D 201 1.93 REMARK 500 O HOH A 430 O HOH B 401 1.98 REMARK 500 O HOH C 399 O HOH C 428 1.98 REMARK 500 O HOH D 320 O HOH D 327 1.99 REMARK 500 N LYS C 84 O HOH C 201 2.00 REMARK 500 NZ LYS A 84 O HOH A 201 2.02 REMARK 500 O HOH B 240 O HOH B 365 2.04 REMARK 500 O HOH A 263 O HOH A 366 2.05 REMARK 500 ND2 ASN C 38 O HOH C 202 2.06 REMARK 500 O HOH A 415 O HOH A 434 2.07 REMARK 500 O HOH A 249 O HOH A 357 2.07 REMARK 500 O HOH B 216 O HOH B 364 2.08 REMARK 500 O HOH D 337 O HOH D 405 2.10 REMARK 500 O HOH B 275 O HOH B 389 2.11 REMARK 500 O HOH C 220 O HOH C 270 2.12 REMARK 500 O HOH C 438 O HOH D 426 2.12 REMARK 500 O HOH A 218 O HOH A 363 2.12 REMARK 500 OG1 THR D 4 O HOH D 202 2.14 REMARK 500 O HOH B 315 O HOH B 390 2.14 REMARK 500 O HOH C 376 O HOH D 442 2.15 REMARK 500 O HOH C 332 O HOH D 364 2.15 REMARK 500 O HOH A 212 O HOH A 460 2.15 REMARK 500 O HOH B 413 O HOH B 444 2.17 REMARK 500 O HOH A 453 O HOH B 445 2.17 REMARK 500 O HOH A 472 O HOH A 473 2.18 REMARK 500 N MET C 70 O HOH C 203 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 478 O HOH D 395 3656 2.11 REMARK 500 O HOH A 475 O HOH C 413 4466 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 121 -159.75 -148.24 REMARK 500 ASP C 121 -159.39 -148.10 REMARK 500 ASP D 121 -159.15 -148.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 485 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH A 486 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH A 487 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH A 488 DISTANCE = 6.32 ANGSTROMS REMARK 525 HOH A 489 DISTANCE = 6.48 ANGSTROMS REMARK 525 HOH A 490 DISTANCE = 6.68 ANGSTROMS REMARK 525 HOH A 491 DISTANCE = 7.04 ANGSTROMS REMARK 525 HOH B 449 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH B 450 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH B 451 DISTANCE = 6.31 ANGSTROMS REMARK 525 HOH B 452 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH B 453 DISTANCE = 6.67 ANGSTROMS REMARK 525 HOH B 454 DISTANCE = 6.71 ANGSTROMS REMARK 525 HOH C 443 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH C 444 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH C 445 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH C 446 DISTANCE = 6.64 ANGSTROMS REMARK 525 HOH C 447 DISTANCE = 6.83 ANGSTROMS REMARK 525 HOH D 479 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH D 480 DISTANCE = 6.49 ANGSTROMS REMARK 525 HOH D 481 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH D 482 DISTANCE = 6.64 ANGSTROMS REMARK 525 HOH D 483 DISTANCE = 6.91 ANGSTROMS REMARK 525 HOH D 484 DISTANCE = 7.45 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6YF7 RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BACTERIOPHAGE AC REMARK 900 RELATED ID: 6YF9 RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BACTERIOPHAGE AVE002 REMARK 900 RELATED ID: 6YFA RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BACTERIOPHAGE AVE015 REMARK 900 RELATED ID: 6YFB RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BACTERIOPHAGE AVE016 REMARK 900 RELATED ID: 6YFC RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BACTERIOPHAGE AVE019 REMARK 900 RELATED ID: 6YFD RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BEIHAI LEVI-LIKE VIRUS 14 REMARK 900 RELATED ID: 6YFE RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BEIHAI LEVI-LIKE VIRUS 19 REMARK 900 RELATED ID: 6YFF RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BEIHAI LEVI-LIKE VIRUS 21 REMARK 900 RELATED ID: 6YFG RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BEIHAI LEVI-LIKE VIRUS 32 REMARK 900 RELATED ID: 6YFH RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BACTERIOPHAGE EMS014 REMARK 900 RELATED ID: 6YFJ RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BACTERIOPHAGE ESE001 REMARK 900 RELATED ID: 6YFK RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BACTERIOPHAGE ESE007 REMARK 900 RELATED ID: 6YFL RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BACTERIOPHAGE ESE020 REMARK 900 RELATED ID: 6YFM RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BACTERIOPHAGE ESE021 REMARK 900 RELATED ID: 6YFN RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BACTERIOPHAGE ESE058 REMARK 900 RELATED ID: 6YFO RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BACTERIOPHAGE GQ-112 REMARK 900 RELATED ID: 6YFP RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BACTERIOPHAGE GQ-907 REMARK 900 RELATED ID: 6YFQ RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BACTERIOPHAGE NT-214 REMARK 900 RELATED ID: 6YFR RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BACTERIOPHAGE NT-391 REMARK 900 RELATED ID: 6YFS RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF BACTERIOPHAGE PQ-465 REMARK 900 RELATED ID: 6YFT RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF WENZHOU LEVI-LIKE VIRUS 1 REMARK 900 RELATED ID: 6YFU RELATED DB: PDB REMARK 900 VIRUS-LIKE PARTICLE OF WENZHOU LEVI-LIKE VIRUS 4 DBREF 6YFI A 1 156 PDB 6YFI 6YFI 1 156 DBREF 6YFI B 1 156 PDB 6YFI 6YFI 1 156 DBREF 6YFI C 1 156 PDB 6YFI 6YFI 1 156 DBREF 6YFI D 1 156 PDB 6YFI 6YFI 1 156 SEQRES 1 A 156 PRO ALA MET THR ASN ILE VAL LEU ARG ASP ASP GLN THR SEQRES 2 A 156 SER VAL ALA THR LYS THR LEU ILE PRO ILE VAL SER ASP SEQRES 3 A 156 GLY ASN MET SER VAL TRP ARG GLU ASN ALA ALA ASN VAL SEQRES 4 A 156 PRO ILE ASP GLY GLN ILE LYS LEU THR GLY GLN TRP GLU SEQRES 5 A 156 ARG MET LYS ASP GLY THR TYR ARG LEU ASN ALA LYS LEU SEQRES 6 A 156 GLU VAL PRO VAL MET GLU THR ALA GLY ALA GLY GLY ALA SEQRES 7 A 156 TYR VAL ALA PRO PRO LYS VAL ALA TYR LYS VAL THR ALA SEQRES 8 A 156 SER LEU THR LEU TYR ALA PRO SER ARG SER THR ILE ALA SEQRES 9 A 156 ASP ARG ALA ASN ALA MET LYS MET LEU SER ALA VAL LEU SEQRES 10 A 156 CYS GLY ALA ASP ALA THR ALA GLY THR THR LEU SER PRO SEQRES 11 A 156 GLN SER VAL THR GLY ASP ALA TRP LYS ASN SER ALA LEU SEQRES 12 A 156 PRO PHE VAL PHE GLY PHE ILE ASN GLN ALA PHE PRO THR SEQRES 1 B 156 PRO ALA MET THR ASN ILE VAL LEU ARG ASP ASP GLN THR SEQRES 2 B 156 SER VAL ALA THR LYS THR LEU ILE PRO ILE VAL SER ASP SEQRES 3 B 156 GLY ASN MET SER VAL TRP ARG GLU ASN ALA ALA ASN VAL SEQRES 4 B 156 PRO ILE ASP GLY GLN ILE LYS LEU THR GLY GLN TRP GLU SEQRES 5 B 156 ARG MET LYS ASP GLY THR TYR ARG LEU ASN ALA LYS LEU SEQRES 6 B 156 GLU VAL PRO VAL MET GLU THR ALA GLY ALA GLY GLY ALA SEQRES 7 B 156 TYR VAL ALA PRO PRO LYS VAL ALA TYR LYS VAL THR ALA SEQRES 8 B 156 SER LEU THR LEU TYR ALA PRO SER ARG SER THR ILE ALA SEQRES 9 B 156 ASP ARG ALA ASN ALA MET LYS MET LEU SER ALA VAL LEU SEQRES 10 B 156 CYS GLY ALA ASP ALA THR ALA GLY THR THR LEU SER PRO SEQRES 11 B 156 GLN SER VAL THR GLY ASP ALA TRP LYS ASN SER ALA LEU SEQRES 12 B 156 PRO PHE VAL PHE GLY PHE ILE ASN GLN ALA PHE PRO THR SEQRES 1 C 156 PRO ALA MET THR ASN ILE VAL LEU ARG ASP ASP GLN THR SEQRES 2 C 156 SER VAL ALA THR LYS THR LEU ILE PRO ILE VAL SER ASP SEQRES 3 C 156 GLY ASN MET SER VAL TRP ARG GLU ASN ALA ALA ASN VAL SEQRES 4 C 156 PRO ILE ASP GLY GLN ILE LYS LEU THR GLY GLN TRP GLU SEQRES 5 C 156 ARG MET LYS ASP GLY THR TYR ARG LEU ASN ALA LYS LEU SEQRES 6 C 156 GLU VAL PRO VAL MET GLU THR ALA GLY ALA GLY GLY ALA SEQRES 7 C 156 TYR VAL ALA PRO PRO LYS VAL ALA TYR LYS VAL THR ALA SEQRES 8 C 156 SER LEU THR LEU TYR ALA PRO SER ARG SER THR ILE ALA SEQRES 9 C 156 ASP ARG ALA ASN ALA MET LYS MET LEU SER ALA VAL LEU SEQRES 10 C 156 CYS GLY ALA ASP ALA THR ALA GLY THR THR LEU SER PRO SEQRES 11 C 156 GLN SER VAL THR GLY ASP ALA TRP LYS ASN SER ALA LEU SEQRES 12 C 156 PRO PHE VAL PHE GLY PHE ILE ASN GLN ALA PHE PRO THR SEQRES 1 D 156 PRO ALA MET THR ASN ILE VAL LEU ARG ASP ASP GLN THR SEQRES 2 D 156 SER VAL ALA THR LYS THR LEU ILE PRO ILE VAL SER ASP SEQRES 3 D 156 GLY ASN MET SER VAL TRP ARG GLU ASN ALA ALA ASN VAL SEQRES 4 D 156 PRO ILE ASP GLY GLN ILE LYS LEU THR GLY GLN TRP GLU SEQRES 5 D 156 ARG MET LYS ASP GLY THR TYR ARG LEU ASN ALA LYS LEU SEQRES 6 D 156 GLU VAL PRO VAL MET GLU THR ALA GLY ALA GLY GLY ALA SEQRES 7 D 156 TYR VAL ALA PRO PRO LYS VAL ALA TYR LYS VAL THR ALA SEQRES 8 D 156 SER LEU THR LEU TYR ALA PRO SER ARG SER THR ILE ALA SEQRES 9 D 156 ASP ARG ALA ASN ALA MET LYS MET LEU SER ALA VAL LEU SEQRES 10 D 156 CYS GLY ALA ASP ALA THR ALA GLY THR THR LEU SER PRO SEQRES 11 D 156 GLN SER VAL THR GLY ASP ALA TRP LYS ASN SER ALA LEU SEQRES 12 D 156 PRO PHE VAL PHE GLY PHE ILE ASN GLN ALA PHE PRO THR FORMUL 5 HOH *1076(H2 O) HELIX 1 AA1 PRO A 40 GLN A 44 5 5 HELIX 2 AA2 THR A 102 CYS A 118 1 17 HELIX 3 AA3 ASP A 136 SER A 141 1 6 HELIX 4 AA4 LEU A 143 GLN A 152 1 10 HELIX 5 AA5 PRO B 40 GLN B 44 5 5 HELIX 6 AA6 THR B 102 CYS B 118 1 17 HELIX 7 AA7 LEU B 143 ASN B 151 1 9 HELIX 8 AA8 PRO C 40 GLN C 44 5 5 HELIX 9 AA9 THR C 102 CYS C 118 1 17 HELIX 10 AB1 LEU C 143 ASN C 151 1 9 HELIX 11 AB2 PRO D 40 GLN D 44 5 5 HELIX 12 AB3 THR D 102 CYS D 118 1 17 HELIX 13 AB4 LEU D 143 GLN D 152 1 10 SHEET 1 AA112 ILE A 6 ARG A 9 0 SHEET 2 AA112 THR A 17 SER A 25 -1 O LEU A 20 N ILE A 6 SHEET 3 AA112 MET A 29 ARG A 33 -1 O VAL A 31 N ILE A 23 SHEET 4 AA112 LYS A 46 ARG A 53 -1 O GLY A 49 N SER A 30 SHEET 5 AA112 TYR A 59 MET A 70 -1 O ASN A 62 N GLN A 50 SHEET 6 AA112 VAL A 85 ALA A 97 -1 O ALA A 91 N LEU A 65 SHEET 7 AA112 VAL B 85 ALA B 97 -1 O THR B 90 N TYR A 96 SHEET 8 AA112 TYR B 59 MET B 70 -1 N VAL B 69 O TYR B 87 SHEET 9 AA112 LYS B 46 ARG B 53 -1 N GLN B 50 O ASN B 62 SHEET 10 AA112 MET B 29 GLU B 34 -1 N TRP B 32 O LEU B 47 SHEET 11 AA112 THR B 17 SER B 25 -1 N ILE B 23 O VAL B 31 SHEET 12 AA112 ILE B 6 ARG B 9 -1 N LEU B 8 O LYS B 18 SHEET 1 AA212 ILE C 6 ARG C 9 0 SHEET 2 AA212 THR C 17 ASP C 26 -1 O LYS C 18 N LEU C 8 SHEET 3 AA212 MET C 29 GLU C 34 -1 O VAL C 31 N ILE C 23 SHEET 4 AA212 LYS C 46 ARG C 53 -1 O LEU C 47 N TRP C 32 SHEET 5 AA212 TYR C 59 MET C 70 -1 O GLU C 66 N LYS C 46 SHEET 6 AA212 VAL C 85 ALA C 97 -1 O ALA C 91 N LEU C 65 SHEET 7 AA212 VAL D 85 ALA D 97 -1 O TYR D 96 N THR C 90 SHEET 8 AA212 TYR D 59 MET D 70 -1 N LEU D 65 O ALA D 91 SHEET 9 AA212 LYS D 46 ARG D 53 -1 N GLU D 52 O ARG D 60 SHEET 10 AA212 MET D 29 ARG D 33 -1 N TRP D 32 O LEU D 47 SHEET 11 AA212 THR D 17 SER D 25 -1 N ILE D 23 O VAL D 31 SHEET 12 AA212 ILE D 6 ARG D 9 -1 N ILE D 6 O LEU D 20 CRYST1 71.558 92.699 94.819 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013975 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010788 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010546 0.00000