HEADER RNA 08-APR-20 6YMI TITLE CRYSTAL STRUCTURE OF THE SAM-SAH RIBOSWITCH WITH AMP. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHAINS: A,C,F,I,M,O; COMPND 3 CHAIN: A, C, F, I, M, O; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CHAINS: B,D,G,J,N,P; COMPND 7 CHAIN: B, D, G, J, N, P; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: ROSEOBACTER SP.; SOURCE 4 ORGANISM_TAXID: 1907202; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: ROSEOBACTER SP.; SOURCE 8 ORGANISM_TAXID: 1907202 KEYWDS PSEUDOKNOT; SAM; RIBOSWITCH, RNA EXPDTA X-RAY DIFFRACTION AUTHOR L.HUANG,D.M.J.LILLEY REVDAT 5 07-FEB-24 6YMI 1 REMARK REVDAT 4 08-MAR-23 6YMI 1 TITLE REVDAT 3 20-APR-22 6YMI 1 COMPND REMARK LINK SITE REVDAT 3 2 1 ATOM REVDAT 2 29-JUL-20 6YMI 1 JRNL REVDAT 1 22-JUL-20 6YMI 0 JRNL AUTH L.HUANG,T.W.LIAO,J.WANG,T.HA,D.M.J.LILLEY JRNL TITL CRYSTAL STRUCTURE AND LIGAND-INDUCED FOLDING OF THE SAM/SAH JRNL TITL 2 RIBOSWITCH. JRNL REF NUCLEIC ACIDS RES. V. 48 7545 2020 JRNL REFN ESSN 1362-4962 JRNL PMID 32520325 JRNL DOI 10.1093/NAR/GKAA493 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.1 REMARK 3 NUMBER OF REFLECTIONS : 57583 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 2895 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 74.5900 - 6.9000 0.96 2781 135 0.1729 0.1386 REMARK 3 2 6.9000 - 5.4800 0.94 2772 99 0.1718 0.1852 REMARK 3 3 5.4700 - 4.7800 0.95 2722 160 0.1771 0.2156 REMARK 3 4 4.7800 - 4.3500 0.92 2708 85 0.1808 0.2177 REMARK 3 5 4.3400 - 4.0300 0.90 2584 149 0.1729 0.2057 REMARK 3 6 4.0300 - 3.8000 0.92 2750 91 0.1843 0.2027 REMARK 3 7 3.8000 - 3.6100 0.92 2654 136 0.1854 0.2184 REMARK 3 8 3.6100 - 3.4500 0.93 2693 142 0.2170 0.2449 REMARK 3 9 3.4500 - 3.3200 0.93 2730 100 0.2126 0.2445 REMARK 3 10 3.3200 - 3.2000 0.93 2724 159 0.2298 0.2679 REMARK 3 11 3.2000 - 3.1000 0.91 2575 167 0.2377 0.3196 REMARK 3 12 3.1000 - 3.0100 0.88 2538 124 0.2694 0.2706 REMARK 3 13 3.0100 - 2.9300 0.88 2548 162 0.2847 0.3142 REMARK 3 14 2.9300 - 2.8600 0.90 2610 134 0.3138 0.3554 REMARK 3 15 2.8600 - 2.8000 0.89 2605 136 0.3198 0.3378 REMARK 3 16 2.8000 - 2.7400 0.91 2618 156 0.3270 0.3425 REMARK 3 17 2.7400 - 2.6800 0.90 2491 190 0.3244 0.3198 REMARK 3 18 2.6800 - 2.6300 0.90 2619 155 0.3391 0.3727 REMARK 3 19 2.6300 - 2.5800 0.87 2477 148 0.3644 0.4340 REMARK 3 20 2.5800 - 2.5400 0.86 2507 151 0.3767 0.3949 REMARK 3 21 2.5400 - 2.5000 0.69 1982 116 0.3910 0.4581 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.503 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.038 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 60.27 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5181 REMARK 3 ANGLE : 0.797 8022 REMARK 3 CHIRALITY : 0.036 1068 REMARK 3 PLANARITY : 0.006 219 REMARK 3 DIHEDRAL : 15.263 2517 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 23 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 7 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.7418 13.1608 22.5403 REMARK 3 T TENSOR REMARK 3 T11: 0.6197 T22: 0.6329 REMARK 3 T33: 0.5951 T12: 0.0614 REMARK 3 T13: -0.0823 T23: 0.0583 REMARK 3 L TENSOR REMARK 3 L11: 0.5670 L22: 1.7702 REMARK 3 L33: 0.2406 L12: 0.5879 REMARK 3 L13: -0.1693 L23: 0.6406 REMARK 3 S TENSOR REMARK 3 S11: -0.0898 S12: 0.0548 S13: 0.5406 REMARK 3 S21: -0.6180 S22: 0.0007 S23: 0.6374 REMARK 3 S31: -0.2225 S32: -0.2011 S33: -0.0004 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.4316 12.0440 30.2731 REMARK 3 T TENSOR REMARK 3 T11: 0.5398 T22: 0.6419 REMARK 3 T33: 0.6172 T12: -0.0509 REMARK 3 T13: 0.1177 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 0.5409 L22: 0.1681 REMARK 3 L33: 0.2047 L12: 0.1387 REMARK 3 L13: 0.1432 L23: 0.2182 REMARK 3 S TENSOR REMARK 3 S11: -0.0099 S12: -0.2214 S13: -0.7485 REMARK 3 S21: -0.1145 S22: -0.2660 S23: -0.3032 REMARK 3 S31: -0.1132 S32: -0.1515 S33: 0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.4782 11.9271 21.1116 REMARK 3 T TENSOR REMARK 3 T11: 0.4934 T22: 0.6805 REMARK 3 T33: 0.5517 T12: -0.0028 REMARK 3 T13: -0.0447 T23: 0.0733 REMARK 3 L TENSOR REMARK 3 L11: 0.3960 L22: 2.0400 REMARK 3 L33: 0.3039 L12: 0.0613 REMARK 3 L13: 0.0138 L23: -0.8218 REMARK 3 S TENSOR REMARK 3 S11: -0.1785 S12: -0.0909 S13: 0.1083 REMARK 3 S21: -0.6218 S22: 0.1425 S23: 0.7030 REMARK 3 S31: -0.2164 S32: -0.1572 S33: -0.0013 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 43 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.3930 23.0264 27.5751 REMARK 3 T TENSOR REMARK 3 T11: 0.5996 T22: 0.6423 REMARK 3 T33: 0.6513 T12: -0.0180 REMARK 3 T13: 0.0380 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: 0.0648 L22: 0.7647 REMARK 3 L33: 0.1783 L12: -0.1814 REMARK 3 L13: -0.0048 L23: 0.4463 REMARK 3 S TENSOR REMARK 3 S11: 0.2174 S12: 0.4161 S13: 0.3709 REMARK 3 S21: 0.1073 S22: -0.0003 S23: 0.1167 REMARK 3 S31: -0.7396 S32: 0.5390 S33: 0.0012 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 7 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4546 2.9619 10.6291 REMARK 3 T TENSOR REMARK 3 T11: 0.3749 T22: 0.9456 REMARK 3 T33: 1.3419 T12: -0.1213 REMARK 3 T13: -0.2311 T23: -0.0454 REMARK 3 L TENSOR REMARK 3 L11: -0.0108 L22: 1.0368 REMARK 3 L33: 1.1726 L12: 0.3050 REMARK 3 L13: -0.1145 L23: -1.1840 REMARK 3 S TENSOR REMARK 3 S11: -1.0976 S12: 0.4692 S13: 1.2704 REMARK 3 S21: -0.9428 S22: -0.5207 S23: 0.0814 REMARK 3 S31: -0.0930 S32: 0.2814 S33: -0.3118 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 18 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.2903 3.9771 10.8403 REMARK 3 T TENSOR REMARK 3 T11: 0.7420 T22: 0.8899 REMARK 3 T33: 0.8726 T12: -0.1767 REMARK 3 T13: -0.1002 T23: -0.0788 REMARK 3 L TENSOR REMARK 3 L11: 0.8911 L22: 2.2098 REMARK 3 L33: 0.4928 L12: 0.9449 REMARK 3 L13: 0.8702 L23: -0.1918 REMARK 3 S TENSOR REMARK 3 S11: -0.9429 S12: 0.2691 S13: 0.2762 REMARK 3 S21: -0.5646 S22: 0.2524 S23: -0.6584 REMARK 3 S31: -0.5320 S32: 0.1944 S33: -0.0091 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 43 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.0777 -10.6469 10.9021 REMARK 3 T TENSOR REMARK 3 T11: 0.7428 T22: 0.8629 REMARK 3 T33: 0.6728 T12: -0.0824 REMARK 3 T13: 0.0275 T23: -0.0589 REMARK 3 L TENSOR REMARK 3 L11: 0.5520 L22: 2.4363 REMARK 3 L33: 2.6334 L12: 0.0762 REMARK 3 L13: -1.1197 L23: -1.1373 REMARK 3 S TENSOR REMARK 3 S11: -0.4037 S12: 0.3366 S13: 0.3303 REMARK 3 S21: -0.5496 S22: 0.1598 S23: -0.9917 REMARK 3 S31: 0.5684 S32: 0.5762 S33: -0.0010 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 7 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.5539 57.3914 22.5402 REMARK 3 T TENSOR REMARK 3 T11: 0.6249 T22: 0.5789 REMARK 3 T33: 0.4491 T12: 0.0261 REMARK 3 T13: 0.0168 T23: -0.0981 REMARK 3 L TENSOR REMARK 3 L11: 2.1367 L22: 0.5088 REMARK 3 L33: 0.2816 L12: 0.8605 REMARK 3 L13: 0.2042 L23: -0.3400 REMARK 3 S TENSOR REMARK 3 S11: -0.2382 S12: 0.2146 S13: -0.3907 REMARK 3 S21: -0.2325 S22: 0.2230 S23: -0.1586 REMARK 3 S31: 0.2647 S32: -0.0767 S33: 0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 18 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.7517 62.6899 26.0886 REMARK 3 T TENSOR REMARK 3 T11: 0.5697 T22: 0.5404 REMARK 3 T33: 0.4239 T12: 0.0557 REMARK 3 T13: -0.0013 T23: 0.0240 REMARK 3 L TENSOR REMARK 3 L11: 2.4730 L22: 0.3806 REMARK 3 L33: 0.2549 L12: -0.8349 REMARK 3 L13: 0.8348 L23: -0.1855 REMARK 3 S TENSOR REMARK 3 S11: -0.0005 S12: -0.1430 S13: -0.0811 REMARK 3 S21: 0.0526 S22: 0.1661 S23: -0.0115 REMARK 3 S31: -0.0755 S32: -0.0112 S33: 0.0010 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 28 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.5938 50.8961 19.9684 REMARK 3 T TENSOR REMARK 3 T11: 0.6819 T22: 0.6331 REMARK 3 T33: 0.6713 T12: 0.1461 REMARK 3 T13: -0.0360 T23: -0.1890 REMARK 3 L TENSOR REMARK 3 L11: 1.2207 L22: 0.1647 REMARK 3 L33: 0.5684 L12: 0.4508 REMARK 3 L13: 0.1518 L23: 0.0745 REMARK 3 S TENSOR REMARK 3 S11: -0.4374 S12: 0.4278 S13: -1.5175 REMARK 3 S21: 0.3075 S22: 0.7554 S23: 0.0173 REMARK 3 S31: -0.1151 S32: 0.2256 S33: 0.0019 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 43 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.6302 65.2807 27.0954 REMARK 3 T TENSOR REMARK 3 T11: 0.6016 T22: 0.5733 REMARK 3 T33: 0.5483 T12: 0.0581 REMARK 3 T13: 0.0245 T23: 0.0207 REMARK 3 L TENSOR REMARK 3 L11: 0.8919 L22: 0.9924 REMARK 3 L33: 1.2754 L12: -0.4191 REMARK 3 L13: -0.4602 L23: -0.7540 REMARK 3 S TENSOR REMARK 3 S11: 0.1760 S12: -0.0277 S13: -0.1121 REMARK 3 S21: -0.3395 S22: -0.3347 S23: 0.4001 REMARK 3 S31: -0.3936 S32: -1.1470 S33: 0.0004 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'I' AND (RESID 7 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.3470 32.3678 16.2244 REMARK 3 T TENSOR REMARK 3 T11: 1.0030 T22: 0.8442 REMARK 3 T33: 1.2793 T12: 0.2186 REMARK 3 T13: 0.1199 T23: -0.3304 REMARK 3 L TENSOR REMARK 3 L11: 0.1768 L22: 0.4360 REMARK 3 L33: 0.6180 L12: 0.2188 REMARK 3 L13: -0.1498 L23: 0.1876 REMARK 3 S TENSOR REMARK 3 S11: -0.2360 S12: 0.5093 S13: 0.0083 REMARK 3 S21: 0.0552 S22: 0.0943 S23: -1.0532 REMARK 3 S31: 1.2436 S32: -0.6942 S33: 0.0157 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'I' AND (RESID 13 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.1768 28.4970 4.5678 REMARK 3 T TENSOR REMARK 3 T11: 0.8297 T22: 0.8236 REMARK 3 T33: 0.9473 T12: 0.1898 REMARK 3 T13: 0.0073 T23: 0.2536 REMARK 3 L TENSOR REMARK 3 L11: 1.2676 L22: 0.3231 REMARK 3 L33: 1.1550 L12: 0.5904 REMARK 3 L13: 0.5241 L23: 0.5917 REMARK 3 S TENSOR REMARK 3 S11: -0.2672 S12: 1.0634 S13: 0.5264 REMARK 3 S21: -0.0614 S22: 0.1516 S23: 0.9446 REMARK 3 S31: -0.2422 S32: -0.2893 S33: -0.0019 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'I' AND (RESID 23 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.5574 35.3238 10.9274 REMARK 3 T TENSOR REMARK 3 T11: 0.8120 T22: 0.9189 REMARK 3 T33: 1.4248 T12: 0.2228 REMARK 3 T13: -0.0397 T23: -0.1019 REMARK 3 L TENSOR REMARK 3 L11: 0.3828 L22: 0.1549 REMARK 3 L33: 0.3794 L12: -0.2605 REMARK 3 L13: -0.4934 L23: 0.3028 REMARK 3 S TENSOR REMARK 3 S11: -0.0411 S12: 0.6909 S13: 1.5466 REMARK 3 S21: -0.2652 S22: -0.6318 S23: 0.2931 REMARK 3 S31: 0.4593 S32: -0.4981 S33: -0.0133 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'J' AND (RESID 43 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.0370 31.3615 9.7910 REMARK 3 T TENSOR REMARK 3 T11: 0.7778 T22: 0.7613 REMARK 3 T33: 0.7916 T12: 0.1479 REMARK 3 T13: -0.0633 T23: 0.1949 REMARK 3 L TENSOR REMARK 3 L11: 2.5131 L22: 1.3820 REMARK 3 L33: 1.9663 L12: 1.6193 REMARK 3 L13: 1.3391 L23: 0.0801 REMARK 3 S TENSOR REMARK 3 S11: -0.0375 S12: 0.5497 S13: 0.9536 REMARK 3 S21: -0.7780 S22: 0.3488 S23: 0.9973 REMARK 3 S31: -0.3479 S32: 0.3366 S33: 0.0008 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'M' AND (RESID 7 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.8499 4.4543 23.0215 REMARK 3 T TENSOR REMARK 3 T11: 0.5866 T22: 0.6426 REMARK 3 T33: 0.4111 T12: -0.0406 REMARK 3 T13: 0.1013 T23: 0.1059 REMARK 3 L TENSOR REMARK 3 L11: 1.4850 L22: 1.1737 REMARK 3 L33: 0.5328 L12: -1.3516 REMARK 3 L13: 0.0709 L23: 0.2691 REMARK 3 S TENSOR REMARK 3 S11: 0.2748 S12: 0.3463 S13: 0.3686 REMARK 3 S21: -0.0117 S22: -0.4913 S23: 0.0662 REMARK 3 S31: -0.0682 S32: 0.2700 S33: -0.0005 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'M' AND (RESID 18 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.9964 -7.0179 30.4170 REMARK 3 T TENSOR REMARK 3 T11: 0.5504 T22: 0.5362 REMARK 3 T33: 0.5143 T12: -0.0232 REMARK 3 T13: 0.0257 T23: -0.0475 REMARK 3 L TENSOR REMARK 3 L11: 0.5036 L22: 0.7141 REMARK 3 L33: 0.6047 L12: 0.2068 REMARK 3 L13: 0.2829 L23: -0.4524 REMARK 3 S TENSOR REMARK 3 S11: -0.0585 S12: -0.0351 S13: 0.2622 REMARK 3 S21: -0.1850 S22: -0.1735 S23: 0.6166 REMARK 3 S31: -0.3375 S32: -0.1585 S33: 0.0002 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'M' AND (RESID 23 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.2754 9.6385 21.7656 REMARK 3 T TENSOR REMARK 3 T11: 0.7409 T22: 0.6312 REMARK 3 T33: 0.4520 T12: -0.1747 REMARK 3 T13: 0.0957 T23: -0.0364 REMARK 3 L TENSOR REMARK 3 L11: 2.0356 L22: 0.6295 REMARK 3 L33: 0.1521 L12: -1.1817 REMARK 3 L13: -0.6445 L23: 0.3842 REMARK 3 S TENSOR REMARK 3 S11: 0.1836 S12: 0.2467 S13: 0.6024 REMARK 3 S21: -0.2204 S22: -0.3924 S23: -0.1246 REMARK 3 S31: -0.2894 S32: 0.1085 S33: -0.0245 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'N' AND (RESID 43 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.7680 -13.2644 27.9967 REMARK 3 T TENSOR REMARK 3 T11: 0.5562 T22: 0.5946 REMARK 3 T33: 0.4811 T12: -0.0647 REMARK 3 T13: 0.0178 T23: -0.0442 REMARK 3 L TENSOR REMARK 3 L11: 1.1254 L22: 0.9209 REMARK 3 L33: 1.2643 L12: 0.1973 REMARK 3 L13: 1.2603 L23: 0.1344 REMARK 3 S TENSOR REMARK 3 S11: -0.2097 S12: 0.1693 S13: 0.0346 REMARK 3 S21: -0.3212 S22: 0.3277 S23: 0.0270 REMARK 3 S31: 0.6801 S32: 0.2750 S33: 0.0001 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'O' AND (RESID 7 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.3037 31.9677 16.6109 REMARK 3 T TENSOR REMARK 3 T11: 1.0398 T22: 0.7435 REMARK 3 T33: 1.6651 T12: -0.1642 REMARK 3 T13: 0.0925 T23: 0.3040 REMARK 3 L TENSOR REMARK 3 L11: 0.4188 L22: 0.0408 REMARK 3 L33: 0.8268 L12: 0.1099 REMARK 3 L13: -0.0119 L23: -0.1675 REMARK 3 S TENSOR REMARK 3 S11: 0.7097 S12: 0.0183 S13: 0.6166 REMARK 3 S21: 0.2579 S22: -0.9859 S23: 0.2496 REMARK 3 S31: -0.4858 S32: 1.4667 S33: 0.0299 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'O' AND (RESID 13 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.6981 49.8131 4.4140 REMARK 3 T TENSOR REMARK 3 T11: 0.8143 T22: 0.6192 REMARK 3 T33: 0.8199 T12: -0.0702 REMARK 3 T13: -0.1656 T23: -0.0511 REMARK 3 L TENSOR REMARK 3 L11: 0.9887 L22: 1.0321 REMARK 3 L33: 1.4851 L12: -0.8093 REMARK 3 L13: -1.0228 L23: 0.2338 REMARK 3 S TENSOR REMARK 3 S11: 0.2856 S12: 0.0611 S13: -1.0382 REMARK 3 S21: -0.3543 S22: -0.4795 S23: -0.0132 REMARK 3 S31: 0.2768 S32: -0.4600 S33: -0.0009 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'O' AND (RESID 23 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.2307 33.0810 11.1206 REMARK 3 T TENSOR REMARK 3 T11: 1.0126 T22: 0.6013 REMARK 3 T33: 1.3749 T12: -0.0653 REMARK 3 T13: 0.0446 T23: 0.0506 REMARK 3 L TENSOR REMARK 3 L11: 0.1070 L22: 0.1233 REMARK 3 L33: 0.9610 L12: 0.1153 REMARK 3 L13: -0.3854 L23: -0.4496 REMARK 3 S TENSOR REMARK 3 S11: -0.2207 S12: -0.1142 S13: -0.6537 REMARK 3 S21: -0.6639 S22: -0.3796 S23: 0.4537 REMARK 3 S31: 0.5521 S32: 0.6898 S33: -0.0003 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'P' AND (RESID 43 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.7858 54.4552 9.3427 REMARK 3 T TENSOR REMARK 3 T11: 0.7113 T22: 0.6628 REMARK 3 T33: 0.8363 T12: -0.0410 REMARK 3 T13: -0.2130 T23: -0.0871 REMARK 3 L TENSOR REMARK 3 L11: 1.2653 L22: 1.2748 REMARK 3 L33: 2.6551 L12: -1.2463 REMARK 3 L13: -1.4648 L23: 1.6249 REMARK 3 S TENSOR REMARK 3 S11: -0.0356 S12: 0.3741 S13: -0.9360 REMARK 3 S21: -0.8041 S22: -0.2791 S23: 0.9219 REMARK 3 S31: 0.0635 S32: -0.7457 S33: -0.0007 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN 'A' REMARK 3 SELECTION : CHAIN 'C' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN 'A' REMARK 3 SELECTION : CHAIN 'F' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: CHAIN 'A' REMARK 3 SELECTION : CHAIN 'I' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 4 REMARK 3 REFERENCE SELECTION: CHAIN 'A' REMARK 3 SELECTION : CHAIN 'M' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 5 REMARK 3 REFERENCE SELECTION: CHAIN 'A' REMARK 3 SELECTION : CHAIN 'O' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN 'B' REMARK 3 SELECTION : CHAIN 'D' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN 'B' REMARK 3 SELECTION : CHAIN 'G' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: CHAIN 'B' REMARK 3 SELECTION : CHAIN 'J' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 4 REMARK 3 REFERENCE SELECTION: CHAIN 'B' REMARK 3 SELECTION : CHAIN 'N' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 5 REMARK 3 REFERENCE SELECTION: CHAIN 'B' REMARK 3 SELECTION : CHAIN 'P' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6YMI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-APR-20. REMARK 100 THE DEPOSITION ID IS D_1292107801. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-FEB-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9119 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57583 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 74.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.83000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6YL5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.01 M MAGNESIUM SULFATE, 0.05 M REMARK 280 SODIUM CACODYLATE PH 6.0, 1.8 M LITHIUM SULFATE MONOHYDRATE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 43.25300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 73.67950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 43.25300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 73.67950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: M, N REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: O, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CBV A 10 REMARK 465 CBV C 10 REMARK 465 CBV F 10 REMARK 465 CBV I 10 REMARK 465 CBV M 10 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OP2 C M 31 O HOH M 201 1.94 REMARK 500 OP1 G F 25 O HOH F 201 2.12 REMARK 500 OP1 A A 11 O3' CBV A 101 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O2 C D 50 O2' A P 51 4445 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 U O 9 C3' - O3' - P ANGL. DEV. = -19.1 DEGREES REMARK 500 CBV O 101 C3' - O3' - P ANGL. DEV. = -13.5 DEGREES REMARK 500 A O 11 O3' - P - OP2 ANGL. DEV. = 23.1 DEGREES REMARK 500 A O 11 O3' - P - OP1 ANGL. DEV. = -26.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 CBV A 101 REMARK 610 CBV C 101 REMARK 610 CBV F 101 REMARK 610 CBV I 101 REMARK 610 CBV M 101 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CBV A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP A 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CBV C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP C 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP F 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP G 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CBV I 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP I 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP M 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP N 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP O 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide CBV F 101 and A F REMARK 800 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide CBV M 101 and A M REMARK 800 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide CBV O 101 and A O REMARK 800 11 DBREF 6YMI A 7 32 PDB 6YMI 6YMI 7 32 DBREF 6YMI B 43 51 PDB 6YMI 6YMI 43 51 DBREF 6YMI C 7 32 PDB 6YMI 6YMI 7 32 DBREF 6YMI D 43 51 PDB 6YMI 6YMI 43 51 DBREF 6YMI F 7 32 PDB 6YMI 6YMI 7 32 DBREF 6YMI G 43 51 PDB 6YMI 6YMI 43 51 DBREF 6YMI I 7 32 PDB 6YMI 6YMI 7 32 DBREF 6YMI J 43 51 PDB 6YMI 6YMI 43 51 DBREF 6YMI M 7 32 PDB 6YMI 6YMI 7 32 DBREF 6YMI N 43 51 PDB 6YMI 6YMI 43 51 DBREF 6YMI O 7 32 PDB 6YMI 6YMI 7 32 DBREF 6YMI P 43 51 PDB 6YMI 6YMI 43 51 SEQRES 1 A 26 G G U CBV A C A A C G G C U SEQRES 2 A 26 U C C U G G C G U G A C C SEQRES 1 B 9 A U U G G A G C A SEQRES 1 C 26 G G U CBV A C A A C G G C U SEQRES 2 C 26 U C C U G G C G U G A C C SEQRES 1 D 9 A U U G G A G C A SEQRES 1 F 26 G G U CBV A C A A C G G C U SEQRES 2 F 26 U C C U G G C G U G A C C SEQRES 1 G 9 A U U G G A G C A SEQRES 1 I 26 G G U CBV A C A A C G G C U SEQRES 2 I 26 U C C U G G C G U G A C C SEQRES 1 J 9 A U U G G A G C A SEQRES 1 M 26 G G U CBV A C A A C G G C U SEQRES 2 M 26 U C C U G G C G U G A C C SEQRES 1 N 9 A U U G G A G C A SEQRES 1 O 26 G G U CBV A C A A C G G C U SEQRES 2 O 26 U C C U G G C G U G A C C SEQRES 1 P 9 A U U G G A G C A HET CBV O 101 21 HET CBV A 101 21 HET AMP A 102 23 HET AMP A 103 23 HET CBV C 101 21 HET AMP C 102 23 HET CBV F 101 21 HET AMP F 102 23 HET AMP G 101 23 HET CBV I 101 21 HET AMP I 102 23 HET CBV M 101 21 HET AMP M 102 23 HET AMP N 101 23 HET AMP O 201 23 HETNAM CBV 5-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE) HETNAM AMP ADENOSINE MONOPHOSPHATE FORMUL 11 CBV 6(C9 H13 BR N3 O8 P) FORMUL 14 AMP 9(C10 H14 N5 O7 P) FORMUL 27 HOH *20(H2 O) LINK P A A 11 O3' CBV A 101 1555 1555 1.56 LINK P A F 11 O3' CBV F 101 1555 1555 1.56 LINK P A M 11 O3' CBV M 101 1555 1555 1.55 LINK O3' U O 9 P CBV O 101 1555 1555 1.56 LINK P A O 11 O3' CBV O 101 1555 1555 1.56 SITE 1 AC1 6 U A 9 A A 11 G A 29 A A 30 SITE 2 AC1 6 C G 50 A G 51 SITE 1 AC2 7 A A 14 G A 24 G A 25 C A 26 SITE 2 AC2 7 U B 44 C I 22 U I 23 SITE 1 AC3 8 C A 15 G A 16 C A 22 U A 23 SITE 2 AC3 8 G A 24 U B 44 U B 45 G B 46 SITE 1 AC4 4 U C 9 A C 11 G C 29 A C 30 SITE 1 AC5 8 C C 15 G C 16 U C 23 G C 24 SITE 2 AC5 8 U D 44 U D 45 G D 46 A N 43 SITE 1 AC6 8 C F 15 G F 16 C F 22 U F 23 SITE 2 AC6 8 G F 24 U G 44 U G 45 G G 46 SITE 1 AC7 9 A F 14 G F 24 G F 25 C F 26 SITE 2 AC7 9 U G 44 HOH G 201 HOH G 203 C O 22 SITE 3 AC7 9 U O 23 SITE 1 AC8 4 U I 9 A I 11 G I 29 A I 30 SITE 1 AC9 8 A B 43 C I 15 G I 16 U I 23 SITE 2 AC9 8 G I 24 U J 44 U J 45 G J 46 SITE 1 AD1 8 C M 15 G M 16 C M 22 U M 23 SITE 2 AD1 8 G M 24 U N 44 U N 45 G N 46 SITE 1 AD2 7 C C 22 U C 23 A M 14 G M 24 SITE 2 AD2 7 G M 25 C M 26 U N 44 SITE 1 AD3 7 A G 43 C O 15 G O 16 U O 23 SITE 2 AD3 7 G O 24 U P 44 G P 46 SITE 1 AD4 9 U F 9 C F 12 G F 27 U F 28 SITE 2 AD4 9 G F 29 A F 30 C M 18 C N 50 SITE 3 AD4 9 A N 51 SITE 1 AD5 9 C A 18 C B 50 A B 51 U M 9 SITE 2 AD5 9 C M 12 G M 27 U M 28 G M 29 SITE 3 AD5 9 A M 30 SITE 1 AD6 6 U O 9 C O 12 U O 28 G O 29 SITE 2 AD6 6 A O 30 HOH O 302 CRYST1 86.506 147.359 74.844 90.00 91.36 90.00 C 1 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011560 0.000000 0.000275 0.00000 SCALE2 0.000000 0.006786 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013365 0.00000