HEADER RNA 08-APR-20 6YMJ TITLE CRYSTAL STRUCTURE OF THE SAM-SAH RIBOSWITCH WITH ADENOSINE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHAINS: A,C,F,I,M,O; COMPND 3 CHAIN: A, C, F, I, M, O; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CHAINS: B,D,G,J,N,P; COMPND 7 CHAIN: B, D, G, J, N, P; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: ROSEOBACTER SP.; SOURCE 4 ORGANISM_TAXID: 1907202; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: ROSEOBACTER SP.; SOURCE 8 ORGANISM_TAXID: 1907202 KEYWDS PSEUDOKNOT; SAM; RIBOSWITCH, RNA EXPDTA X-RAY DIFFRACTION AUTHOR L.HUANG,D.M.J.LILLEY REVDAT 5 07-FEB-24 6YMJ 1 REMARK REVDAT 4 08-MAR-23 6YMJ 1 TITLE REVDAT 3 13-APR-22 6YMJ 1 COMPND REMARK LINK SITE REVDAT 3 2 1 ATOM REVDAT 2 29-JUL-20 6YMJ 1 JRNL REVDAT 1 22-JUL-20 6YMJ 0 JRNL AUTH L.HUANG,T.W.LIAO,J.WANG,T.HA,D.M.J.LILLEY JRNL TITL CRYSTAL STRUCTURE AND LIGAND-INDUCED FOLDING OF THE SAM/SAH JRNL TITL 2 RIBOSWITCH. JRNL REF NUCLEIC ACIDS RES. V. 48 7545 2020 JRNL REFN ESSN 1362-4962 JRNL PMID 32520325 JRNL DOI 10.1093/NAR/GKAA493 REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 76.5 REMARK 3 NUMBER OF REFLECTIONS : 90426 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.810 REMARK 3 FREE R VALUE TEST SET COUNT : 4345 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.3400 - 6.3300 0.94 3594 143 0.1517 0.1809 REMARK 3 2 6.3300 - 5.0300 0.98 3758 103 0.1353 0.2083 REMARK 3 3 5.0300 - 4.3900 0.93 3497 191 0.1430 0.1536 REMARK 3 4 4.3900 - 3.9900 0.96 3608 184 0.1402 0.1852 REMARK 3 5 3.9900 - 3.7100 0.97 3675 147 0.1504 0.2014 REMARK 3 6 3.7100 - 3.4900 0.97 3671 191 0.1740 0.1661 REMARK 3 7 3.4900 - 3.3100 0.98 3632 179 0.1890 0.2170 REMARK 3 8 3.3100 - 3.1700 0.96 3648 157 0.2083 0.2359 REMARK 3 9 3.1700 - 3.0500 0.92 3418 220 0.2312 0.3034 REMARK 3 10 3.0500 - 2.9400 0.94 3620 121 0.2480 0.2669 REMARK 3 11 2.9400 - 2.8500 0.96 3596 168 0.2876 0.2706 REMARK 3 12 2.8500 - 2.7700 0.97 3587 193 0.3195 0.3151 REMARK 3 13 2.7700 - 2.7000 0.97 3594 259 0.3071 0.3279 REMARK 3 14 2.7000 - 2.6300 0.97 3605 210 0.2997 0.3227 REMARK 3 15 2.6300 - 2.5700 0.98 3667 194 0.2953 0.3244 REMARK 3 16 2.5700 - 2.5200 0.97 3599 199 0.3027 0.3068 REMARK 3 17 2.5200 - 2.4700 0.97 3604 259 0.3220 0.3296 REMARK 3 18 2.4700 - 2.4200 0.93 3475 177 0.3393 0.3765 REMARK 3 19 2.4200 - 2.3800 0.92 3475 133 0.3323 0.3546 REMARK 3 20 2.3800 - 2.3400 0.92 3481 141 0.3529 0.3583 REMARK 3 21 2.3400 - 2.3000 0.91 3464 155 0.3508 0.3931 REMARK 3 22 2.3000 - 2.2600 0.89 3267 189 0.3788 0.3886 REMARK 3 23 2.2600 - 2.2300 0.82 3060 178 0.3645 0.3603 REMARK 3 24 2.2300 - 2.2000 0.58 2143 136 0.3604 0.3846 REMARK 3 25 2.2000 - 2.1700 0.30 1136 66 0.3878 0.3944 REMARK 3 26 2.1700 - 2.1400 0.17 611 31 0.3834 0.3573 REMARK 3 27 2.1400 - 2.1100 0.06 234 8 0.4090 0.3976 REMARK 3 28 2.1100 - 2.0900 0.04 157 6 0.3799 0.3280 REMARK 3 29 2.0900 - 2.0600 0.03 120 1 0.4552 0.6199 REMARK 3 30 2.0600 - 2.0400 0.02 85 6 0.3516 0.6114 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.351 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.992 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 63.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5145 REMARK 3 ANGLE : 0.480 7959 REMARK 3 CHIRALITY : 0.018 1068 REMARK 3 PLANARITY : 0.002 219 REMARK 3 DIHEDRAL : 13.676 2436 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 23 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 7 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.8717 13.2253 22.6521 REMARK 3 T TENSOR REMARK 3 T11: 0.6058 T22: 0.5916 REMARK 3 T33: 0.5365 T12: 0.0098 REMARK 3 T13: -0.0406 T23: 0.0437 REMARK 3 L TENSOR REMARK 3 L11: 0.5369 L22: 0.5553 REMARK 3 L33: 1.6227 L12: 0.8217 REMARK 3 L13: -0.1457 L23: -0.2315 REMARK 3 S TENSOR REMARK 3 S11: 0.0837 S12: -0.2215 S13: 0.3982 REMARK 3 S21: -0.4012 S22: -0.1226 S23: 0.2769 REMARK 3 S31: -0.0775 S32: -0.0242 S33: -0.0003 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.5142 12.0866 30.3132 REMARK 3 T TENSOR REMARK 3 T11: 0.5778 T22: 0.6865 REMARK 3 T33: 0.6333 T12: -0.0685 REMARK 3 T13: 0.0994 T23: 0.0336 REMARK 3 L TENSOR REMARK 3 L11: 0.4498 L22: 0.0505 REMARK 3 L33: 0.1060 L12: -0.0191 REMARK 3 L13: 0.0785 L23: 0.0131 REMARK 3 S TENSOR REMARK 3 S11: 0.1775 S12: -0.0471 S13: -0.6139 REMARK 3 S21: 0.0633 S22: -0.5040 S23: -0.3100 REMARK 3 S31: -0.0626 S32: 0.1685 S33: 0.0004 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.5718 11.9795 21.1932 REMARK 3 T TENSOR REMARK 3 T11: 0.5804 T22: 0.7189 REMARK 3 T33: 0.6602 T12: -0.0086 REMARK 3 T13: -0.0130 T23: 0.0628 REMARK 3 L TENSOR REMARK 3 L11: 0.1810 L22: 1.2216 REMARK 3 L33: 0.2401 L12: 0.1704 REMARK 3 L13: 0.0516 L23: -0.7382 REMARK 3 S TENSOR REMARK 3 S11: -0.0652 S12: -0.1914 S13: 0.1872 REMARK 3 S21: -0.4175 S22: 0.0290 S23: 0.4553 REMARK 3 S31: 0.0175 S32: -0.1241 S33: -0.0008 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 43 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.4402 23.1193 27.6866 REMARK 3 T TENSOR REMARK 3 T11: 0.6358 T22: 0.7025 REMARK 3 T33: 0.7164 T12: -0.0038 REMARK 3 T13: 0.0906 T23: 0.0648 REMARK 3 L TENSOR REMARK 3 L11: 0.3424 L22: 0.0188 REMARK 3 L33: 0.1112 L12: 0.3527 REMARK 3 L13: 0.5977 L23: 0.1820 REMARK 3 S TENSOR REMARK 3 S11: 0.0692 S12: 0.4120 S13: 0.5956 REMARK 3 S21: 0.2544 S22: -0.2321 S23: 0.1887 REMARK 3 S31: -0.6764 S32: 0.5442 S33: -0.0005 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 7 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.7329 1.3562 9.7951 REMARK 3 T TENSOR REMARK 3 T11: 0.6489 T22: 0.9675 REMARK 3 T33: 0.7332 T12: -0.1446 REMARK 3 T13: 0.0500 T23: -0.0568 REMARK 3 L TENSOR REMARK 3 L11: 0.9706 L22: 1.7554 REMARK 3 L33: 1.3979 L12: 0.0489 REMARK 3 L13: 2.1468 L23: -0.6730 REMARK 3 S TENSOR REMARK 3 S11: -0.5371 S12: 0.3907 S13: 0.4760 REMARK 3 S21: -0.4957 S22: 0.1477 S23: -0.3914 REMARK 3 S31: -0.2105 S32: 0.2727 S33: -0.0007 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 23 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.4345 6.9204 12.7550 REMARK 3 T TENSOR REMARK 3 T11: 0.7451 T22: 1.0464 REMARK 3 T33: 0.8869 T12: -0.2392 REMARK 3 T13: -0.0228 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 1.0876 L22: 0.6195 REMARK 3 L33: 0.5863 L12: -0.7803 REMARK 3 L13: 0.9660 L23: -0.3255 REMARK 3 S TENSOR REMARK 3 S11: -0.5876 S12: 0.8481 S13: 0.4461 REMARK 3 S21: -0.4456 S22: 0.2478 S23: -0.6791 REMARK 3 S31: -0.3409 S32: 0.0715 S33: 0.0006 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 43 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.9898 -10.7352 11.0814 REMARK 3 T TENSOR REMARK 3 T11: 0.7395 T22: 0.9368 REMARK 3 T33: 0.5385 T12: -0.0781 REMARK 3 T13: -0.0022 T23: -0.1128 REMARK 3 L TENSOR REMARK 3 L11: 0.4047 L22: 3.0494 REMARK 3 L33: 2.2882 L12: 0.4908 REMARK 3 L13: -1.0810 L23: -1.4661 REMARK 3 S TENSOR REMARK 3 S11: -0.1788 S12: 0.4945 S13: 0.0528 REMARK 3 S21: -0.5366 S22: 0.3090 S23: -0.6628 REMARK 3 S31: 0.2506 S32: 0.4364 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 7 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6379 57.4453 22.6172 REMARK 3 T TENSOR REMARK 3 T11: 0.5499 T22: 0.5879 REMARK 3 T33: 0.4952 T12: 0.0129 REMARK 3 T13: 0.0070 T23: -0.0843 REMARK 3 L TENSOR REMARK 3 L11: 1.0213 L22: 0.2685 REMARK 3 L33: 1.7000 L12: 0.2015 REMARK 3 L13: 0.1669 L23: -0.3430 REMARK 3 S TENSOR REMARK 3 S11: -0.1377 S12: 0.2972 S13: -0.4608 REMARK 3 S21: 0.0448 S22: 0.1806 S23: 0.1139 REMARK 3 S31: 0.1262 S32: 0.0694 S33: -0.0003 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 18 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.6593 70.0573 29.9523 REMARK 3 T TENSOR REMARK 3 T11: 0.5513 T22: 0.6022 REMARK 3 T33: 0.4671 T12: 0.0981 REMARK 3 T13: -0.0114 T23: 0.0717 REMARK 3 L TENSOR REMARK 3 L11: 0.5244 L22: 0.8282 REMARK 3 L33: 0.1265 L12: -0.7160 REMARK 3 L13: -0.1695 L23: 0.2857 REMARK 3 S TENSOR REMARK 3 S11: -0.3269 S12: -0.1992 S13: 0.4315 REMARK 3 S21: -0.0078 S22: -0.0299 S23: -0.5915 REMARK 3 S31: -0.0359 S32: -0.3072 S33: 0.0002 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 23 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.9057 53.5275 21.3602 REMARK 3 T TENSOR REMARK 3 T11: 0.5986 T22: 0.6029 REMARK 3 T33: 0.4663 T12: 0.1101 REMARK 3 T13: -0.0394 T23: -0.0296 REMARK 3 L TENSOR REMARK 3 L11: 1.2111 L22: 1.1708 REMARK 3 L33: 0.7527 L12: 1.1666 REMARK 3 L13: 0.8704 L23: 0.8904 REMARK 3 S TENSOR REMARK 3 S11: -0.0145 S12: 0.3217 S13: -0.6178 REMARK 3 S21: -0.0854 S22: 0.2144 S23: -0.0478 REMARK 3 S31: 0.1246 S32: 0.1378 S33: -0.0004 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 43 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.6258 65.3853 27.2015 REMARK 3 T TENSOR REMARK 3 T11: 0.6075 T22: 0.6242 REMARK 3 T33: 0.5623 T12: 0.0575 REMARK 3 T13: -0.0640 T23: 0.0690 REMARK 3 L TENSOR REMARK 3 L11: 0.8769 L22: 0.4878 REMARK 3 L33: 0.7883 L12: -0.3911 REMARK 3 L13: -0.9865 L23: -0.0510 REMARK 3 S TENSOR REMARK 3 S11: -0.0036 S12: -0.2196 S13: -0.4295 REMARK 3 S21: -0.1168 S22: -0.0676 S23: 0.4850 REMARK 3 S31: -0.2225 S32: -0.6553 S33: -0.0007 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'I' AND (RESID 7 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.9996 29.7994 8.5003 REMARK 3 T TENSOR REMARK 3 T11: 0.7557 T22: 0.7094 REMARK 3 T33: 1.1349 T12: 0.1790 REMARK 3 T13: 0.0747 T23: 0.2161 REMARK 3 L TENSOR REMARK 3 L11: 2.0721 L22: 0.2394 REMARK 3 L33: 1.7520 L12: 0.4721 REMARK 3 L13: 0.9675 L23: 1.5971 REMARK 3 S TENSOR REMARK 3 S11: -0.3753 S12: 0.6309 S13: 0.4473 REMARK 3 S21: 0.2370 S22: -0.3187 S23: 0.4998 REMARK 3 S31: -0.0119 S32: -0.1651 S33: -0.0007 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'I' AND (RESID 23 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1460 36.1981 10.9501 REMARK 3 T TENSOR REMARK 3 T11: 0.6838 T22: 0.5761 REMARK 3 T33: 1.8633 T12: 0.2667 REMARK 3 T13: -0.0825 T23: -0.0956 REMARK 3 L TENSOR REMARK 3 L11: 1.0496 L22: 0.9285 REMARK 3 L33: 0.2310 L12: -0.9952 REMARK 3 L13: -0.3763 L23: 0.5185 REMARK 3 S TENSOR REMARK 3 S11: -0.1216 S12: -0.9218 S13: 1.3304 REMARK 3 S21: 0.4091 S22: -0.6588 S23: 1.4905 REMARK 3 S31: -0.3829 S32: -0.6908 S33: -0.1719 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'I' AND (RESID 28 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6422 34.4107 11.0836 REMARK 3 T TENSOR REMARK 3 T11: 0.8307 T22: 1.1468 REMARK 3 T33: 1.3508 T12: 0.1494 REMARK 3 T13: 0.0628 T23: -0.1896 REMARK 3 L TENSOR REMARK 3 L11: 0.0401 L22: 0.2053 REMARK 3 L33: 0.2261 L12: -0.0468 REMARK 3 L13: -0.1042 L23: 0.2830 REMARK 3 S TENSOR REMARK 3 S11: 0.4378 S12: 0.3042 S13: 1.0128 REMARK 3 S21: 0.1200 S22: -0.4276 S23: 0.8627 REMARK 3 S31: 0.5019 S32: 0.2805 S33: 0.0008 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'J' AND (RESID 43 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.0385 31.4967 9.8206 REMARK 3 T TENSOR REMARK 3 T11: 0.7119 T22: 0.7932 REMARK 3 T33: 0.9410 T12: 0.0683 REMARK 3 T13: -0.0033 T23: 0.2391 REMARK 3 L TENSOR REMARK 3 L11: 2.9646 L22: 1.4400 REMARK 3 L33: 2.4134 L12: 2.2425 REMARK 3 L13: 2.0428 L23: 1.1130 REMARK 3 S TENSOR REMARK 3 S11: -0.0976 S12: 0.7497 S13: 1.0524 REMARK 3 S21: -0.1388 S22: 0.1745 S23: 0.8316 REMARK 3 S31: -0.1888 S32: 0.6055 S33: -0.0006 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'M' AND (RESID 7 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.6868 14.9427 25.4106 REMARK 3 T TENSOR REMARK 3 T11: 0.7666 T22: 0.6392 REMARK 3 T33: 0.7193 T12: -0.0544 REMARK 3 T13: 0.1508 T23: 0.1166 REMARK 3 L TENSOR REMARK 3 L11: 0.1455 L22: 0.3377 REMARK 3 L33: 0.4123 L12: -0.1233 REMARK 3 L13: -0.1652 L23: -0.1663 REMARK 3 S TENSOR REMARK 3 S11: -0.2625 S12: -0.1682 S13: -0.1704 REMARK 3 S21: -0.8147 S22: -0.3413 S23: -0.9146 REMARK 3 S31: 0.2350 S32: 0.2712 S33: -0.0011 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'M' AND (RESID 13 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.9459 -5.7000 20.9644 REMARK 3 T TENSOR REMARK 3 T11: 0.6423 T22: 0.6777 REMARK 3 T33: 0.4521 T12: -0.0285 REMARK 3 T13: 0.0681 T23: -0.0455 REMARK 3 L TENSOR REMARK 3 L11: 0.4152 L22: 0.2250 REMARK 3 L33: 0.5987 L12: 0.2545 REMARK 3 L13: 0.0249 L23: -0.1531 REMARK 3 S TENSOR REMARK 3 S11: 0.4006 S12: 0.5315 S13: 0.0722 REMARK 3 S21: 0.5845 S22: -0.4182 S23: 0.0835 REMARK 3 S31: 0.3673 S32: -0.0028 S33: -0.0006 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'M' AND (RESID 18 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.1333 -7.1640 30.5210 REMARK 3 T TENSOR REMARK 3 T11: 0.6047 T22: 0.5671 REMARK 3 T33: 0.5130 T12: -0.0656 REMARK 3 T13: 0.0036 T23: -0.1131 REMARK 3 L TENSOR REMARK 3 L11: 0.1876 L22: 0.9211 REMARK 3 L33: 0.2747 L12: 0.2846 REMARK 3 L13: -0.0074 L23: -0.4738 REMARK 3 S TENSOR REMARK 3 S11: 0.0679 S12: 0.2172 S13: 0.2346 REMARK 3 S21: 0.0537 S22: -0.1988 S23: 0.4631 REMARK 3 S31: 0.0306 S32: -0.0700 S33: 0.0001 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'M' AND (RESID 23 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.3609 9.5666 21.8549 REMARK 3 T TENSOR REMARK 3 T11: 0.7429 T22: 0.6089 REMARK 3 T33: 0.5686 T12: -0.1175 REMARK 3 T13: 0.0856 T23: -0.0213 REMARK 3 L TENSOR REMARK 3 L11: 2.0372 L22: 0.8769 REMARK 3 L33: 0.3206 L12: -0.9949 REMARK 3 L13: -0.5771 L23: 0.6804 REMARK 3 S TENSOR REMARK 3 S11: 0.3081 S12: 0.3054 S13: 0.6166 REMARK 3 S21: -0.2303 S22: -0.3822 S23: -0.1856 REMARK 3 S31: -0.2587 S32: 0.1831 S33: -0.0011 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'N' AND (RESID 43 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.8299 -13.3604 28.1384 REMARK 3 T TENSOR REMARK 3 T11: 0.6571 T22: 0.6380 REMARK 3 T33: 0.4658 T12: -0.0547 REMARK 3 T13: 0.0166 T23: -0.0905 REMARK 3 L TENSOR REMARK 3 L11: 0.3050 L22: -0.0324 REMARK 3 L33: 0.5833 L12: 0.6851 REMARK 3 L13: 0.3717 L23: 0.0522 REMARK 3 S TENSOR REMARK 3 S11: -0.3005 S12: 0.0426 S13: -0.2184 REMARK 3 S21: -0.2819 S22: 0.0775 S23: 0.0022 REMARK 3 S31: 0.4682 S32: 0.2002 S33: -0.0003 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'O' AND (RESID 7 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.3835 31.8816 16.6931 REMARK 3 T TENSOR REMARK 3 T11: 1.0080 T22: 0.7172 REMARK 3 T33: 1.2802 T12: -0.0325 REMARK 3 T13: 0.2292 T23: 0.1902 REMARK 3 L TENSOR REMARK 3 L11: 0.1861 L22: -0.0543 REMARK 3 L33: 0.2577 L12: -0.0330 REMARK 3 L13: 0.2803 L23: -0.1299 REMARK 3 S TENSOR REMARK 3 S11: 0.3255 S12: -0.3177 S13: 0.3613 REMARK 3 S21: 0.2152 S22: -0.5791 S23: 0.4490 REMARK 3 S31: 0.0343 S32: 0.6863 S33: -0.0004 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'O' AND (RESID 13 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.0325 41.4256 7.9022 REMARK 3 T TENSOR REMARK 3 T11: 0.8939 T22: 0.5521 REMARK 3 T33: 1.1889 T12: -0.0225 REMARK 3 T13: -0.1183 T23: -0.0320 REMARK 3 L TENSOR REMARK 3 L11: 0.5665 L22: 1.7807 REMARK 3 L33: 1.3961 L12: -2.3536 REMARK 3 L13: -0.9170 L23: -0.7574 REMARK 3 S TENSOR REMARK 3 S11: -0.0653 S12: 0.0259 S13: -1.0127 REMARK 3 S21: -0.5834 S22: -0.4033 S23: 0.8160 REMARK 3 S31: 0.3731 S32: 0.0412 S33: 0.0003 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'P' AND (RESID 43 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.9199 54.5008 9.3704 REMARK 3 T TENSOR REMARK 3 T11: 0.7252 T22: 0.7187 REMARK 3 T33: 0.8361 T12: -0.0071 REMARK 3 T13: -0.1951 T23: -0.0754 REMARK 3 L TENSOR REMARK 3 L11: 2.3748 L22: 1.3495 REMARK 3 L33: 2.8551 L12: -2.0091 REMARK 3 L13: -1.4663 L23: 1.3491 REMARK 3 S TENSOR REMARK 3 S11: 0.1726 S12: 0.3801 S13: -1.2831 REMARK 3 S21: -0.3382 S22: -0.3882 S23: 0.6266 REMARK 3 S31: -0.3095 S32: -0.6364 S33: -0.0011 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6YMJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-APR-20. REMARK 100 THE DEPOSITION ID IS D_1292107852. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-FEB-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9119 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 90426 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.040 REMARK 200 RESOLUTION RANGE LOW (A) : 74.990 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 1.30000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6YL5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.01 M MAGNESIUM SULFATE, 0.05 M REMARK 280 SODIUM CACODYLATE PH 6.0, 1.8 M LITHIUM SULFATE MONOHYDRATE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 43.29950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 73.78500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 43.29950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 73.78500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: M, N REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: O, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CBV C 10 REMARK 465 CBV O 10 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OP1 A O 11 O3' CBV O 101 1.69 REMARK 500 OP1 A C 11 O3' CBV C 101 1.85 REMARK 500 OP2 G O 27 O HOH O 201 2.04 REMARK 500 N1 A O 13 O HOH O 202 2.12 REMARK 500 O5' A B 43 OP2 U B 45 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CBV A 101 O3' - P - O5' ANGL. DEV. = -13.8 DEGREES REMARK 500 A A 11 O3' - P - OP2 ANGL. DEV. = 7.8 DEGREES REMARK 500 U F 9 C3' - O3' - P ANGL. DEV. = -8.7 DEGREES REMARK 500 CBV I 101 C3' - O3' - P ANGL. DEV. = -16.2 DEGREES REMARK 500 A I 11 O3' - P - OP2 ANGL. DEV. = 24.1 DEGREES REMARK 500 A I 11 O3' - P - OP1 ANGL. DEV. = -29.6 DEGREES REMARK 500 CBV M 101 C3' - O3' - P ANGL. DEV. = -7.3 DEGREES REMARK 500 A M 11 O3' - P - OP2 ANGL. DEV. = 10.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 CBV C 101 REMARK 610 CBV O 101 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CBV A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADN A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADN C 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADN F 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADN F 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADN I 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADN M 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA M 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA M 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADN N 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADN O 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide CBV C 101 and A C REMARK 800 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide CBV F 101 and A F REMARK 800 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide CBV I 101 and A I REMARK 800 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide CBV M 101 and A M REMARK 800 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide CBV O 101 and A O REMARK 800 11 DBREF 6YMJ A 7 32 PDB 6YMJ 6YMJ 7 32 DBREF 6YMJ B 43 51 PDB 6YMJ 6YMJ 43 51 DBREF 6YMJ C 7 32 PDB 6YMJ 6YMJ 7 32 DBREF 6YMJ D 43 51 PDB 6YMJ 6YMJ 43 51 DBREF 6YMJ F 7 32 PDB 6YMJ 6YMJ 7 32 DBREF 6YMJ G 43 51 PDB 6YMJ 6YMJ 43 51 DBREF 6YMJ I 7 32 PDB 6YMJ 6YMJ 7 32 DBREF 6YMJ J 43 51 PDB 6YMJ 6YMJ 43 51 DBREF 6YMJ M 7 32 PDB 6YMJ 6YMJ 7 32 DBREF 6YMJ N 43 51 PDB 6YMJ 6YMJ 43 51 DBREF 6YMJ O 7 32 PDB 6YMJ 6YMJ 7 32 DBREF 6YMJ P 43 51 PDB 6YMJ 6YMJ 43 51 SEQRES 1 A 26 G G U CBV A C A A C G G C U SEQRES 2 A 26 U C C U G G C G U G A C C SEQRES 1 B 9 A U U G G A G C A SEQRES 1 C 26 G G U CBV A C A A C G G C U SEQRES 2 C 26 U C C U G G C G U G A C C SEQRES 1 D 9 A U U G G A G C A SEQRES 1 F 26 G G U CBV A C A A C G G C U SEQRES 2 F 26 U C C U G G C G U G A C C SEQRES 1 G 9 A U U G G A G C A SEQRES 1 I 26 G G U CBV A C A A C G G C U SEQRES 2 I 26 U C C U G G C G U G A C C SEQRES 1 J 9 A U U G G A G C A SEQRES 1 M 26 G G U CBV A C A A C G G C U SEQRES 2 M 26 U C C U G G C G U G A C C SEQRES 1 N 9 A U U G G A G C A SEQRES 1 O 26 G G U CBV A C A A C G G C U SEQRES 2 O 26 U C C U G G C G U G A C C SEQRES 1 P 9 A U U G G A G C A HET CBV A 101 21 HET CBV F 101 21 HET CBV I 101 21 HET CBV M 101 21 HET ADN A 201 19 HET ADN A 202 19 HET NA A 203 1 HET CBV C 101 21 HET ADN C 102 19 HET MG C 103 1 HET ADN F 201 19 HET ADN F 202 19 HET ADN I 201 19 HET ADN M 201 19 HET NA M 202 1 HET NA M 203 1 HET ADN N 101 19 HET CBV O 101 21 HET ADN O 102 19 HETNAM CBV 5-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE) HETNAM ADN ADENOSINE HETNAM NA SODIUM ION HETNAM MG MAGNESIUM ION FORMUL 1 CBV 6(C9 H13 BR N3 O8 P) FORMUL 13 ADN 9(C10 H13 N5 O4) FORMUL 15 NA 3(NA 1+) FORMUL 18 MG MG 2+ FORMUL 28 HOH *37(H2 O) LINK O3' U A 9 P CBV A 101 1555 1555 1.56 LINK P A A 11 O3' CBV A 101 1555 1555 1.56 LINK P A C 11 O3' CBV C 101 1555 1555 1.56 LINK O3' U F 9 P CBV F 101 1555 1555 1.56 LINK P A F 11 O3' CBV F 101 1555 1555 1.56 LINK O3' U I 9 P CBV I 101 1555 1555 1.56 LINK P A I 11 O3' CBV I 101 1555 1555 1.56 LINK O3' U M 9 P CBV M 101 1555 1555 1.56 LINK P A M 11 O3' CBV M 101 1555 1555 1.56 LINK P A O 11 O3' CBV O 101 1555 1555 1.56 SITE 1 AC1 7 U A 9 A A 11 G A 29 A A 30 SITE 2 AC1 7 NA A 203 C G 50 A G 51 SITE 1 AC2 7 C A 15 G A 16 U A 23 G A 24 SITE 2 AC2 7 U B 44 U B 45 G B 46 SITE 1 AC3 7 A A 14 G A 24 G A 25 C A 26 SITE 2 AC3 7 U B 44 C I 22 U I 23 SITE 1 AC4 1 CBV A 101 SITE 1 AC5 8 C C 15 G C 16 U C 23 G C 24 SITE 2 AC5 8 U D 44 U D 45 G D 46 A N 43 SITE 1 AC6 7 C F 15 G F 16 U F 23 G F 24 SITE 2 AC6 7 U G 44 U G 45 G G 46 SITE 1 AC7 7 A F 14 G F 24 G F 25 C F 26 SITE 2 AC7 7 U G 44 C O 22 U O 23 SITE 1 AC8 8 A B 43 C I 15 G I 16 U I 23 SITE 2 AC8 8 G I 24 U J 44 U J 45 G J 46 SITE 1 AC9 7 C M 15 G M 16 U M 23 G M 24 SITE 2 AC9 7 U N 44 U N 45 G N 46 SITE 1 AD1 1 C M 31 SITE 1 AD2 1 A B 51 SITE 1 AD3 7 C C 22 U C 23 A M 14 G M 24 SITE 2 AD3 7 G M 25 C M 26 U N 44 SITE 1 AD4 8 A G 43 C O 15 G O 16 U O 23 SITE 2 AD4 8 G O 24 U P 44 U P 45 G P 46 SITE 1 AD5 5 U C 9 C C 12 U C 28 G C 29 SITE 2 AD5 5 A C 30 SITE 1 AD6 10 U F 9 C F 12 G F 27 U F 28 SITE 2 AD6 10 G F 29 A F 30 HOH F 301 C M 18 SITE 3 AD6 10 C N 50 A N 51 SITE 1 AD7 5 U I 9 C I 12 U I 28 G I 29 SITE 2 AD7 5 A I 30 SITE 1 AD8 9 C A 18 C B 50 A B 51 U M 9 SITE 2 AD8 9 C M 12 G M 27 U M 28 G M 29 SITE 3 AD8 9 A M 30 SITE 1 AD9 5 U O 9 C O 12 U O 28 G O 29 SITE 2 AD9 5 A O 30 CRYST1 86.599 147.570 75.013 90.00 91.36 90.00 C 1 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011547 0.000000 0.000274 0.00000 SCALE2 0.000000 0.006776 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013335 0.00000