HEADER ELECTRON TRANSPORT 10-APR-20 6YMY TITLE CYTOCHROME C OXIDASE FROM SACCHAROMYCES CEREVISIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 1; COMPND 3 CHAIN: a; COMPND 4 SYNONYM: CYTOCHROME C OXIDASE POLYPEPTIDE I; COMPND 5 EC: 1.9.3.1; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 2; COMPND 8 CHAIN: b; COMPND 9 SYNONYM: CYTOCHROME C OXIDASE POLYPEPTIDE II; COMPND 10 EC: 1.9.3.1; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 3; COMPND 13 CHAIN: c; COMPND 14 SYNONYM: CYTOCHROME C OXIDASE POLYPEPTIDE III; COMPND 15 EC: 1.9.3.1; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 4, MITOCHONDRIAL; COMPND 18 CHAIN: d; COMPND 19 SYNONYM: CYTOCHROME C OXIDASE POLYPEPTIDE IV; COMPND 20 MOL_ID: 5; COMPND 21 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 5A, MITOCHONDRIAL; COMPND 22 CHAIN: e; COMPND 23 SYNONYM: CYTOCHROME C OXIDASE POLYPEPTIDE VA; COMPND 24 MOL_ID: 6; COMPND 25 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 6, MITOCHONDRIAL; COMPND 26 CHAIN: f; COMPND 27 SYNONYM: CYTOCHROME C OXIDASE POLYPEPTIDE VI; COMPND 28 MOL_ID: 7; COMPND 29 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 7, MITOCHONDRIAL; COMPND 30 CHAIN: g; COMPND 31 SYNONYM: CYTOCHROME C OXIDASE POLYPEPTIDE VII; COMPND 32 MOL_ID: 8; COMPND 33 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 8, MITOCHONDRIAL; COMPND 34 CHAIN: h; COMPND 35 SYNONYM: CYTOCHROME C OXIDASE POLYPEPTIDE VIII; COMPND 36 MOL_ID: 9; COMPND 37 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 9, MITOCHONDRIAL; COMPND 38 CHAIN: i; COMPND 39 SYNONYM: CYTOCHROME C OXIDASE POLYPEPTIDE VIIA; COMPND 40 MOL_ID: 10; COMPND 41 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 12, MITOCHONDRIAL; COMPND 42 CHAIN: j; COMPND 43 SYNONYM: CYTOCHROME C OXIDASE POLYPEPTIDE VIB; COMPND 44 MOL_ID: 11; COMPND 45 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 13, MITOCHONDRIAL; COMPND 46 CHAIN: k; COMPND 47 SYNONYM: CYTOCHROME C OXIDASE POLYPEPTIDE VIA; COMPND 48 MOL_ID: 12; COMPND 49 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 26, MITOCHONDRIAL; COMPND 50 CHAIN: m SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 ATCC: 208353; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 8 S288C); SOURCE 9 ORGANISM_TAXID: 559292; SOURCE 10 ATCC: 208353; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 13 S288C); SOURCE 14 ORGANISM_TAXID: 559292; SOURCE 15 ATCC: 208353; SOURCE 16 MOL_ID: 4; SOURCE 17 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 18 S288C); SOURCE 19 ORGANISM_TAXID: 559292; SOURCE 20 ATCC: 208353; SOURCE 21 MOL_ID: 5; SOURCE 22 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 23 S288C); SOURCE 24 ORGANISM_TAXID: 559292; SOURCE 25 ATCC: 208353; SOURCE 26 MOL_ID: 6; SOURCE 27 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 28 S288C); SOURCE 29 ORGANISM_TAXID: 559292; SOURCE 30 ATCC: 208353; SOURCE 31 MOL_ID: 7; SOURCE 32 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 33 S288C); SOURCE 34 ORGANISM_TAXID: 559292; SOURCE 35 ATCC: 208353; SOURCE 36 MOL_ID: 8; SOURCE 37 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 38 S288C); SOURCE 39 ORGANISM_TAXID: 559292; SOURCE 40 ATCC: 208353; SOURCE 41 MOL_ID: 9; SOURCE 42 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 43 S288C); SOURCE 44 ORGANISM_TAXID: 559292; SOURCE 45 ATCC: 208353; SOURCE 46 MOL_ID: 10; SOURCE 47 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 48 S288C); SOURCE 49 ORGANISM_TAXID: 559292; SOURCE 50 ATCC: 208353; SOURCE 51 MOL_ID: 11; SOURCE 52 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 53 S288C); SOURCE 54 ORGANISM_TAXID: 559292; SOURCE 55 ATCC: 208353; SOURCE 56 MOL_ID: 12; SOURCE 57 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 58 S288C); SOURCE 59 ORGANISM_TAXID: 559292; SOURCE 60 ATCC: 208353 KEYWDS CIV, CYTCO, ELECTRON TRANSPORT EXPDTA ELECTRON MICROSCOPY AUTHOR J.BERNDTSSON,S.RATHORE,M.OTT REVDAT 2 24-MAR-21 6YMY 1 JRNL REVDAT 1 09-SEP-20 6YMY 0 JRNL AUTH J.BERNDTSSON,A.AUFSCHNAITER,S.RATHORE,L.MARIN-BUERA, JRNL AUTH 2 H.DAWITZ,J.DIESSL,V.KOHLER,A.BARRIENTOS,S.BUTTNER, JRNL AUTH 3 F.FONTANESI,M.OTT JRNL TITL RESPIRATORY SUPERCOMPLEXES ENHANCE ELECTRON TRANSPORT BY JRNL TITL 2 DECREASING CYTOCHROME C DIFFUSION DISTANCE. JRNL REF EMBO REP. V. 21 51015 2020 JRNL REFN ESSN 1469-3178 JRNL PMID 33016568 JRNL DOI 10.15252/EMBR.202051015 REMARK 2 REMARK 2 RESOLUTION. 3.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EPU, CTFFIND, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.410 REMARK 3 NUMBER OF PARTICLES : 201223 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6YMY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-APR-20. REMARK 100 THE DEPOSITION ID IS D_1292107645. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CYTOCHROME C OXIDASE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 8775 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : -1.40 REMARK 245 MAXIMUM DEFOCUS (NM) : -3.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 40.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 130000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 63610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 64310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -560.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: a, b, c, d, e, f, g, h, i, j, REMARK 350 AND CHAINS: k, m REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB PRO b 20 NE2 GLN e 151 0.42 REMARK 500 CG PRO b 20 NE2 GLN e 151 1.32 REMARK 500 CB PRO b 20 CD GLN e 151 1.68 REMARK 500 NE2 HIS a 241 CE2 TYR a 245 1.80 REMARK 500 CA PRO b 20 NE2 GLN e 151 1.91 REMARK 500 CG2 VAL a 532 NH2 ARG d 107 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU j 58 CA - CB - CG ANGL. DEV. = 13.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU a 54 -9.65 73.81 REMARK 500 THR a 174 -166.77 -79.69 REMARK 500 LYS a 181 50.11 -92.33 REMARK 500 ASN a 217 49.63 38.70 REMARK 500 ASN a 406 70.54 58.99 REMARK 500 ASN a 485 -167.31 -128.30 REMARK 500 ASN a 486 36.16 -96.52 REMARK 500 TYR b 122 53.46 -95.16 REMARK 500 GLN b 123 -20.80 71.30 REMARK 500 LEU b 160 19.73 58.64 REMARK 500 ASP b 164 -60.89 -91.38 REMARK 500 ASP b 183 -156.31 -149.23 REMARK 500 ARG b 203 -169.27 -127.90 REMARK 500 ALA b 209 112.26 -160.30 REMARK 500 ASN b 231 52.70 -96.14 REMARK 500 MET b 232 88.96 -157.36 REMARK 500 PRO c 21 40.07 -88.46 REMARK 500 TYR c 44 -9.19 66.36 REMARK 500 ILE c 45 -56.20 -130.95 REMARK 500 MET c 48 53.09 -91.87 REMARK 500 ALA c 113 -31.65 -130.12 REMARK 500 THR c 135 30.81 -92.22 REMARK 500 GLU c 136 -159.20 -138.44 REMARK 500 LYS d 32 77.94 60.69 REMARK 500 GLN d 35 5.03 57.74 REMARK 500 ASP d 59 -9.55 72.41 REMARK 500 TYR d 106 47.25 -142.91 REMARK 500 GLU d 130 110.77 -160.33 REMARK 500 CYS d 134 74.09 59.08 REMARK 500 ASN d 144 76.53 58.34 REMARK 500 LYS e 58 47.85 -90.39 REMARK 500 ASN e 88 -166.04 -78.10 REMARK 500 LYS e 126 -12.19 71.86 REMARK 500 TYR f 64 -1.28 58.16 REMARK 500 LYS f 114 39.09 -97.17 REMARK 500 GLU f 116 -8.06 70.80 REMARK 500 LYS g 4 33.43 -92.89 REMARK 500 ARG g 25 48.14 -87.93 REMARK 500 ASP j 15 70.12 57.64 REMARK 500 ALA j 16 -9.75 -56.72 REMARK 500 LYS k 19 64.87 -150.53 REMARK 500 ALA k 21 -168.10 -169.95 REMARK 500 LYS k 27 2.10 58.34 REMARK 500 GLN k 31 19.67 58.43 REMARK 500 LYS k 32 -38.34 -131.11 REMARK 500 VAL k 58 -53.29 -126.27 REMARK 500 PRO k 93 4.43 -61.71 REMARK 500 ARG k 94 72.19 59.15 REMARK 500 LYS k 104 82.95 53.48 REMARK 500 THR k 114 -169.47 -127.07 REMARK 500 REMARK 500 THIS ENTRY HAS 51 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PTY a 604 REMARK 610 PTY a 605 REMARK 610 PTY b 302 REMARK 610 PTY b 303 REMARK 610 PTY c 301 REMARK 610 PCF c 302 REMARK 610 PTY e 201 REMARK 610 PCF e 202 REMARK 610 PTY i 101 REMARK 610 PCF m 101 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEA a 602 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS a 62 NE2 REMARK 620 2 HEA a 602 NA 85.5 REMARK 620 3 HEA a 602 NB 79.2 91.1 REMARK 620 4 HEA a 602 NC 101.9 171.9 87.0 REMARK 620 5 HEA a 602 ND 108.3 90.6 172.5 90.3 REMARK 620 6 HIS a 378 NE2 162.2 81.1 89.5 91.0 83.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU a 601 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS a 241 ND1 REMARK 620 2 HIS a 290 NE2 92.4 REMARK 620 3 HIS a 291 NE2 107.9 89.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEA a 603 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS a 376 NE2 REMARK 620 2 HEA a 603 NA 88.4 REMARK 620 3 HEA a 603 NB 91.2 90.9 REMARK 620 4 HEA a 603 NC 99.3 172.1 87.2 REMARK 620 5 HEA a 603 ND 96.1 90.9 172.5 90.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU a 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEA a 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEA a 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PTY a 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PTY a 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CN3 a 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CUA b 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PTY b 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PTY b 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PTY c 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PCF c 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN d 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PTY e 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PCF e 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PTY i 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PCF m 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6GIQ RELATED DB: PDB REMARK 900 THIS WORK IS A RE-REFINEMENT OF THE DATA OF 6GIQ, WITH A NEW REMARK 900 DENSITY MAP, AND A NEW MODEL REMARK 900 RELATED ID: 6YMX RELATED DB: PDB REMARK 900 RELATED ID: EMD-10848 RELATED DB: EMDB REMARK 900 CYTOCHROME C OXIDASE FROM SACCHAROMYCES CEREVISIAE DBREF 6YMY a 5 534 UNP P00401 COX1_YEAST 5 534 DBREF 6YMY b 16 251 UNP P00410 COX2_YEAST 16 251 DBREF 6YMY c 2 269 UNP P00420 COX3_YEAST 2 269 DBREF 6YMY d 30 146 UNP P04037 COX4_YEAST 30 146 DBREF 6YMY e 25 152 UNP P00424 COX5A_YEAST 25 152 DBREF 6YMY f 47 145 UNP P00427 COX6_YEAST 47 145 DBREF 6YMY g 3 57 UNP P10174 COX7_YEAST 3 57 DBREF 6YMY h 28 78 UNP P04039 COX8_YEAST 28 78 DBREF 6YMY i 2 53 UNP P07255 COX9_YEAST 2 53 DBREF 6YMY j 6 83 UNP Q01519 COX12_YEAST 6 83 DBREF 6YMY k 16 129 UNP P32799 COX13_YEAST 16 129 DBREF 6YMY m 26 63 UNP Q2V2P9 COX26_YEAST 26 63 SEQRES 1 a 530 TRP LEU TYR SER THR ASN ALA LYS ASP ILE ALA VAL LEU SEQRES 2 a 530 TYR PHE MET LEU ALA ILE PHE SER GLY MET ALA GLY THR SEQRES 3 a 530 ALA MET SER LEU ILE ILE ARG LEU GLU LEU ALA ALA PRO SEQRES 4 a 530 GLY SER GLN TYR LEU HIS GLY ASN SER GLN LEU PHE ASN SEQRES 5 a 530 VAL LEU VAL VAL GLY HIS ALA VAL LEU MET ILE PHE PHE SEQRES 6 a 530 LEU VAL MET PRO ALA LEU ILE GLY GLY PHE GLY ASN TYR SEQRES 7 a 530 LEU LEU PRO LEU MET ILE GLY ALA THR ASP THR ALA PHE SEQRES 8 a 530 PRO ARG ILE ASN ASN ILE ALA PHE TRP VAL LEU PRO MET SEQRES 9 a 530 GLY LEU VAL CYS LEU VAL THR SER THR LEU VAL GLU SER SEQRES 10 a 530 GLY ALA GLY THR GLY TRP THR VAL TYR PRO PRO LEU SER SEQRES 11 a 530 SER ILE GLN ALA HIS SER GLY PRO SER VAL ASP LEU ALA SEQRES 12 a 530 ILE PHE ALA LEU HIS LEU THR SER ILE SER SER LEU LEU SEQRES 13 a 530 GLY ALA ILE ASN PHE ILE VAL THR THR LEU ASN MET ARG SEQRES 14 a 530 THR ASN GLY MET THR MET HIS LYS LEU PRO LEU PHE VAL SEQRES 15 a 530 TRP SER ILE PHE ILE THR ALA PHE LEU LEU LEU LEU SER SEQRES 16 a 530 LEU PRO VAL LEU SER ALA GLY ILE THR MET LEU LEU LEU SEQRES 17 a 530 ASP ARG ASN PHE ASN THR SER PHE PHE GLU VAL SER GLY SEQRES 18 a 530 GLY GLY ASP PRO ILE LEU TYR GLU HIS LEU PHE TRP PHE SEQRES 19 a 530 PHE GLY HIS PRO GLU VAL TYR ILE LEU ILE ILE PRO GLY SEQRES 20 a 530 PHE GLY ILE ILE SER HIS VAL VAL SER THR TYR SER LYS SEQRES 21 a 530 LYS PRO VAL PHE GLY GLU ILE SER MET VAL TYR ALA MET SEQRES 22 a 530 ALA SER ILE GLY LEU LEU GLY PHE LEU VAL TRP SER HIS SEQRES 23 a 530 HIS MET TYR ILE VAL GLY LEU ASP ALA ASP THR ARG ALA SEQRES 24 a 530 TYR PHE THR SER ALA THR MET ILE ILE ALA ILE PRO THR SEQRES 25 a 530 GLY ILE LYS ILE PHE SER TRP LEU ALA THR ILE HIS GLY SEQRES 26 a 530 GLY SER ILE ARG LEU ALA THR PRO MET LEU TYR ALA ILE SEQRES 27 a 530 ALA PHE LEU PHE LEU PHE THR MET GLY GLY LEU THR GLY SEQRES 28 a 530 VAL ALA LEU ALA ASN ALA SER LEU ASP VAL ALA PHE HIS SEQRES 29 a 530 ASP THR TYR TYR VAL VAL GLY HIS PHE HIS TYR VAL LEU SEQRES 30 a 530 SER MET GLY ALA ILE PHE SER LEU PHE ALA GLY TYR TYR SEQRES 31 a 530 TYR TRP SER PRO GLN ILE LEU GLY LEU ASN TYR ASN GLU SEQRES 32 a 530 LYS LEU ALA GLN ILE GLN PHE TRP LEU ILE PHE ILE GLY SEQRES 33 a 530 ALA ASN VAL ILE PHE PHE PRO MET HIS PHE LEU GLY ILE SEQRES 34 a 530 ASN GLY MET PRO ARG ARG ILE PRO ASP TYR PRO ASP ALA SEQRES 35 a 530 PHE ALA GLY TRP ASN TYR VAL ALA SER ILE GLY SER PHE SEQRES 36 a 530 ILE ALA THR LEU SER LEU PHE LEU PHE ILE TYR ILE LEU SEQRES 37 a 530 TYR ASP GLN LEU VAL ASN GLY LEU ASN ASN LYS VAL ASN SEQRES 38 a 530 ASN LYS SER VAL ILE TYR ASN LYS ALA PRO ASP PHE VAL SEQRES 39 a 530 GLU SER ASN THR ILE PHE ASN LEU ASN THR VAL LYS SER SEQRES 40 a 530 SER SER ILE GLU PHE LEU LEU THR SER PRO PRO ALA VAL SEQRES 41 a 530 HIS SER PHE ASN THR PRO ALA VAL GLN SER SEQRES 1 b 236 ASP VAL PRO THR PRO TYR ALA CYS TYR PHE GLN ASP SER SEQRES 2 b 236 ALA THR PRO ASN GLN GLU GLY ILE LEU GLU LEU HIS ASP SEQRES 3 b 236 ASN ILE MET PHE TYR LEU LEU VAL ILE LEU GLY LEU VAL SEQRES 4 b 236 SER TRP MET LEU TYR THR ILE VAL MET THR TYR SER LYS SEQRES 5 b 236 ASN PRO ILE ALA TYR LYS TYR ILE LYS HIS GLY GLN THR SEQRES 6 b 236 ILE GLU VAL ILE TRP THR ILE PHE PRO ALA VAL ILE LEU SEQRES 7 b 236 LEU ILE ILE ALA PHE PRO SER PHE ILE LEU LEU TYR LEU SEQRES 8 b 236 CYS ASP GLU VAL ILE SER PRO ALA MET THR ILE LYS ALA SEQRES 9 b 236 ILE GLY TYR GLN TRP TYR TRP LYS TYR GLU TYR SER ASP SEQRES 10 b 236 PHE ILE ASN ASP SER GLY GLU THR VAL GLU PHE GLU SER SEQRES 11 b 236 TYR VAL ILE PRO ASP GLU LEU LEU GLU GLU GLY GLN LEU SEQRES 12 b 236 ARG LEU LEU ASP THR ASP THR SER MET VAL VAL PRO VAL SEQRES 13 b 236 ASP THR HIS ILE ARG PHE VAL VAL THR ALA ALA ASP VAL SEQRES 14 b 236 ILE HIS ASP PHE ALA ILE PRO SER LEU GLY ILE LYS VAL SEQRES 15 b 236 ASP ALA THR PRO GLY ARG LEU ASN GLN VAL SER ALA LEU SEQRES 16 b 236 ILE GLN ARG GLU GLY VAL PHE TYR GLY ALA CYS SER GLU SEQRES 17 b 236 LEU CYS GLY THR GLY HIS ALA ASN MET PRO ILE LYS ILE SEQRES 18 b 236 GLU ALA VAL SER LEU PRO LYS PHE LEU GLU TRP LEU ASN SEQRES 19 b 236 GLU GLN SEQRES 1 c 268 THR HIS LEU GLU ARG SER ARG HIS GLN GLN HIS PRO PHE SEQRES 2 c 268 HIS MET VAL MET PRO SER PRO TRP PRO ILE VAL VAL SER SEQRES 3 c 268 PHE ALA LEU LEU SER LEU ALA LEU SER THR ALA LEU THR SEQRES 4 c 268 MET HIS GLY TYR ILE GLY ASN MET ASN MET VAL TYR LEU SEQRES 5 c 268 ALA LEU PHE VAL LEU LEU THR SER SER ILE LEU TRP PHE SEQRES 6 c 268 ARG ASP ILE VAL ALA GLU ALA THR TYR LEU GLY ASP HIS SEQRES 7 c 268 THR MET ALA VAL ARG LYS GLY ILE ASN LEU GLY PHE LEU SEQRES 8 c 268 MET PHE VAL LEU SER GLU VAL LEU ILE PHE ALA GLY LEU SEQRES 9 c 268 PHE TRP ALA TYR PHE HIS SER ALA MET SER PRO ASP VAL SEQRES 10 c 268 THR LEU GLY ALA CYS TRP PRO PRO VAL GLY ILE GLU ALA SEQRES 11 c 268 VAL GLN PRO THR GLU LEU PRO LEU LEU ASN THR ILE ILE SEQRES 12 c 268 LEU LEU SER SER GLY ALA THR VAL THR TYR SER HIS HIS SEQRES 13 c 268 ALA LEU ILE ALA GLY ASN ARG ASN LYS ALA LEU SER GLY SEQRES 14 c 268 LEU LEU ILE THR PHE TRP LEU ILE VAL ILE PHE VAL THR SEQRES 15 c 268 CYS GLN TYR ILE GLU TYR THR ASN ALA ALA PHE THR ILE SEQRES 16 c 268 SER ASP GLY VAL TYR GLY SER VAL PHE TYR ALA GLY THR SEQRES 17 c 268 GLY LEU HIS PHE LEU HIS MET VAL MET LEU ALA ALA MET SEQRES 18 c 268 LEU GLY VAL ASN TYR TRP ARG MET ARG ASN TYR HIS LEU SEQRES 19 c 268 THR ALA GLY HIS HIS VAL GLY TYR GLU THR THR ILE ILE SEQRES 20 c 268 TYR THR HIS VAL LEU ASP VAL ILE TRP LEU PHE LEU TYR SEQRES 21 c 268 VAL VAL PHE TYR TRP TRP GLY VAL SEQRES 1 d 117 VAL VAL LYS THR ALA GLN ASN LEU ALA GLU VAL ASN GLY SEQRES 2 d 117 PRO GLU THR LEU ILE GLY PRO GLY ALA LYS GLU GLY THR SEQRES 3 d 117 VAL PRO THR ASP LEU ASP GLN GLU THR GLY LEU ALA ARG SEQRES 4 d 117 LEU GLU LEU LEU GLY LYS LEU GLU GLY ILE ASP VAL PHE SEQRES 5 d 117 ASP THR LYS PRO LEU ASP SER SER ARG LYS GLY THR MET SEQRES 6 d 117 LYS ASP PRO ILE ILE ILE GLU SER TYR ASP ASP TYR ARG SEQRES 7 d 117 TYR VAL GLY CYS THR GLY SER PRO ALA GLY SER HIS THR SEQRES 8 d 117 ILE MET TRP LEU LYS PRO THR VAL ASN GLU VAL ALA ARG SEQRES 9 d 117 CYS TRP GLU CYS GLY SER VAL TYR LYS LEU ASN PRO VAL SEQRES 1 e 128 ALA LEU SER ASN ALA ALA VAL MET ASP LEU GLN SER ARG SEQRES 2 e 128 TRP GLU ASN MET PRO SER THR GLU GLN GLN ASP ILE VAL SEQRES 3 e 128 SER LYS LEU SER GLU ARG GLN LYS LEU PRO TRP ALA GLN SEQRES 4 e 128 LEU THR GLU PRO GLU LYS GLN ALA VAL TRP TYR ILE SER SEQRES 5 e 128 TYR GLY GLU TRP GLY PRO ARG ARG PRO VAL LEU ASN LYS SEQRES 6 e 128 GLY ASP SER SER PHE ILE ALA LYS GLY VAL ALA ALA GLY SEQRES 7 e 128 LEU LEU PHE SER VAL GLY LEU PHE ALA VAL VAL ARG MET SEQRES 8 e 128 ALA GLY GLY GLN ASP ALA LYS THR MET ASN LYS GLU TRP SEQRES 9 e 128 GLN LEU LYS SER ASP GLU TYR LEU LYS SER LYS ASN ALA SEQRES 10 e 128 ASN PRO TRP GLY GLY TYR SER GLN VAL GLN SER SEQRES 1 f 99 GLU THR PHE GLU GLU PHE THR ALA ARG TYR GLU LYS GLU SEQRES 2 f 99 PHE ASP GLU ALA TYR ASP LEU PHE GLU VAL GLN ARG VAL SEQRES 3 f 99 LEU ASN ASN CYS PHE SER TYR ASP LEU VAL PRO ALA PRO SEQRES 4 f 99 ALA VAL ILE GLU LYS ALA LEU ARG ALA ALA ARG ARG VAL SEQRES 5 f 99 ASN ASP LEU PRO THR ALA ILE ARG VAL PHE GLU ALA LEU SEQRES 6 f 99 LYS TYR LYS VAL GLU ASN GLU ASP GLN TYR LYS ALA TYR SEQRES 7 f 99 LEU ASP GLU LEU LYS ASP VAL ARG GLN GLU LEU GLY VAL SEQRES 8 f 99 PRO LEU LYS GLU GLU LEU PHE PRO SEQRES 1 g 55 ASN LYS VAL ILE GLN LEU GLN LYS ILE PHE GLN SER SER SEQRES 2 g 55 THR LYS PRO LEU TRP TRP ARG HIS PRO ARG SER ALA LEU SEQRES 3 g 55 TYR LEU TYR PRO PHE TYR ALA ILE PHE ALA VAL ALA VAL SEQRES 4 g 55 VAL THR PRO LEU LEU TYR ILE PRO ASN ALA ILE ARG GLY SEQRES 5 g 55 ILE LYS ALA SEQRES 1 h 51 VAL HIS PHE LYS ASP GLY VAL TYR GLU ASN ILE PRO PHE SEQRES 2 h 51 LYS VAL LYS GLY ARG LYS THR PRO TYR ALA LEU SER HIS SEQRES 3 h 51 PHE GLY PHE PHE ALA ILE GLY PHE ALA VAL PRO PHE VAL SEQRES 4 h 51 ALA CYS TYR VAL GLN LEU LYS LYS SER GLY ALA PHE SEQRES 1 i 52 THR ILE ALA PRO ILE THR GLY THR ILE LYS ARG ARG VAL SEQRES 2 i 52 ILE MET ASP ILE VAL LEU GLY PHE SER LEU GLY GLY VAL SEQRES 3 i 52 MET ALA SER TYR TRP TRP TRP GLY PHE HIS MET ASP LYS SEQRES 4 i 52 ILE ASN LYS ARG GLU LYS PHE TYR ALA GLU LEU ALA GLU SEQRES 1 j 78 ASN SER PRO LEU HIS THR VAL GLY PHE ASP ALA ARG PHE SEQRES 2 j 78 PRO GLN GLN ASN GLN THR LYS HIS CYS TRP GLN SER TYR SEQRES 3 j 78 VAL ASP TYR HIS LYS CYS VAL ASN MET LYS GLY GLU ASP SEQRES 4 j 78 PHE ALA PRO CYS LYS VAL PHE TRP LYS THR TYR ASN ALA SEQRES 5 j 78 LEU CYS PRO LEU ASP TRP ILE GLU LYS TRP ASP ASP GLN SEQRES 6 j 78 ARG GLU LYS GLY ILE PHE ALA GLY ASP ILE ASN SER ASP SEQRES 1 k 114 ASN ALA LEU LYS PRO ALA PHE GLY PRO PRO ASP LYS VAL SEQRES 2 k 114 ALA ALA GLN LYS PHE LYS GLU SER LEU MET ALA THR GLU SEQRES 3 k 114 LYS HIS ALA LYS ASP THR SER ASN MET TRP VAL LYS ILE SEQRES 4 k 114 SER VAL TRP VAL ALA LEU PRO ALA ILE ALA LEU THR ALA SEQRES 5 k 114 VAL ASN THR TYR PHE VAL GLU LYS GLU HIS ALA GLU HIS SEQRES 6 k 114 ARG GLU HIS LEU LYS HIS VAL PRO ASP SER GLU TRP PRO SEQRES 7 k 114 ARG ASP TYR GLU PHE MET ASN ILE ARG SER LYS PRO PHE SEQRES 8 k 114 PHE TRP GLY ASP GLY ASP LYS THR LEU PHE TRP ASN PRO SEQRES 9 k 114 VAL VAL ASN ARG HIS ILE GLU HIS ASP ASP SEQRES 1 m 38 GLU SER TRP VAL ILE THR GLU GLY ARG ARG LEU ILE PRO SEQRES 2 m 38 GLU ILE PHE GLN TRP SER ALA VAL LEU SER VAL CYS LEU SEQRES 3 m 38 GLY TRP PRO GLY ALA VAL TYR PHE PHE SER LYS ALA HET CU a 601 1 HET HEA a 602 60 HET HEA a 603 60 HET PTY a 604 35 HET PTY a 605 34 HET CN3 a 606 55 HET CUA b 301 2 HET PTY b 302 40 HET PTY b 303 41 HET PTY c 301 40 HET PCF c 302 43 HET ZN d 201 1 HET PTY e 201 32 HET PCF e 202 36 HET PTY i 101 30 HET PCF m 101 38 HETNAM CU COPPER (II) ION HETNAM HEA HEME-A HETNAM PTY PHOSPHATIDYLETHANOLAMINE HETNAM CN3 (2R,5S,11R,14R)-5,8,11-TRIHYDROXY-2-(NONANOYLOXY)-5,11- HETNAM 2 CN3 DIOXIDO-16-OXO-14-[(PROPANOYLOXY)METHYL]-4,6,10,12,15- HETNAM 3 CN3 PENTAOXA-5,11-DIPHOSPHANONADEC-1-YL UNDECANOATE HETNAM CUA DINUCLEAR COPPER ION HETNAM PCF 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE HETNAM ZN ZINC ION HETSYN CN3 CARDIOLIPIN FORMUL 13 CU CU 2+ FORMUL 14 HEA 2(C49 H56 FE N4 O6) FORMUL 16 PTY 7(C40 H80 N O8 P) FORMUL 18 CN3 C36 H68 O17 P2 FORMUL 19 CUA CU2 FORMUL 23 PCF 3(C40 H80 N O8 P) FORMUL 24 ZN ZN 2+ HELIX 1 AA1 ASP a 13 LEU a 40 1 28 HELIX 2 AA2 ASN a 56 PHE a 68 1 13 HELIX 3 AA3 LEU a 70 ILE a 76 1 7 HELIX 4 AA4 GLY a 77 ILE a 88 1 12 HELIX 5 AA5 PHE a 95 VAL a 119 1 25 HELIX 6 AA6 TYR a 130 SER a 135 1 6 HELIX 7 AA7 PRO a 142 VAL a 167 1 26 HELIX 8 AA8 PRO a 183 LEU a 196 1 14 HELIX 9 AA9 SER a 199 PHE a 216 1 18 HELIX 10 AB1 PRO a 229 LEU a 247 1 19 HELIX 11 AB2 ILE a 248 SER a 263 1 16 HELIX 12 AB3 GLY a 269 LEU a 282 1 14 HELIX 13 AB4 TRP a 288 MET a 292 5 5 HELIX 14 AB5 ASP a 298 THR a 306 1 9 HELIX 15 AB6 ILE a 312 GLY a 330 1 19 HELIX 16 AB7 ALA a 335 ASN a 360 1 26 HELIX 17 AB8 LEU a 363 PHE a 367 5 5 HELIX 18 AB9 THR a 370 HIS a 378 1 9 HELIX 19 AC1 ILE a 386 LEU a 401 1 16 HELIX 20 AC2 ASN a 406 PHE a 426 1 21 HELIX 21 AC3 PRO a 427 GLY a 435 1 9 HELIX 22 AC4 PRO a 444 ALA a 448 5 5 HELIX 23 AC5 GLY a 449 VAL a 477 1 29 HELIX 24 AC6 LEU a 480 VAL a 484 5 5 HELIX 25 AC7 SER a 500 ASN a 505 1 6 HELIX 26 AC8 SER a 513 LEU a 517 5 5 HELIX 27 AC9 THR b 30 TYR b 65 1 36 HELIX 28 AD1 GLY b 78 VAL b 83 1 6 HELIX 29 AD2 VAL b 83 LEU b 106 1 24 HELIX 30 AD3 SER b 240 GLN b 251 1 12 HELIX 31 AD4 GLU c 5 HIS c 9 5 5 HELIX 32 AD5 PRO c 21 VAL c 26 1 6 HELIX 33 AD6 VAL c 26 MET c 41 1 16 HELIX 34 AD7 ASN c 49 LEU c 64 1 16 HELIX 35 AD8 LEU c 64 TYR c 75 1 12 HELIX 36 AD9 THR c 80 ILE c 101 1 22 HELIX 37 AE1 ALA c 103 SER c 112 1 10 HELIX 38 AE2 GLU c 136 GLY c 149 1 14 HELIX 39 AE3 HIS c 156 GLY c 162 1 7 HELIX 40 AE4 ASN c 163 TRP c 176 1 14 HELIX 41 AE5 TRP c 176 GLU c 188 1 13 HELIX 42 AE6 VAL c 204 THR c 209 1 6 HELIX 43 AE7 THR c 209 ASN c 232 1 24 HELIX 44 AE8 HIS c 240 TYR c 265 1 26 HELIX 45 AE9 GLY d 42 LEU d 46 5 5 HELIX 46 AF1 LEU d 66 GLU d 76 1 11 HELIX 47 AF2 SER e 27 MET e 32 1 6 HELIX 48 AF3 PRO e 42 GLN e 47 1 6 HELIX 49 AF4 ASP e 48 GLN e 57 1 10 HELIX 50 AF5 THR e 65 GLY e 78 1 14 HELIX 51 AF6 ASP e 91 ALA e 116 1 26 HELIX 52 AF7 LYS e 131 LYS e 139 1 9 HELIX 53 AF8 PHE f 49 PHE f 60 1 12 HELIX 54 AF9 LEU f 66 SER f 78 1 13 HELIX 55 AG1 ALA f 84 ARG f 97 1 14 HELIX 56 AG2 LEU f 101 LYS f 114 1 14 HELIX 57 AG3 ASN f 117 LEU f 128 1 12 HELIX 58 AG4 ASP f 130 GLY f 136 1 7 HELIX 59 AG5 LEU f 139 PHE f 144 1 6 HELIX 60 AG6 VAL g 5 GLN g 13 1 9 HELIX 61 AG7 PRO g 18 ARG g 22 5 5 HELIX 62 AG8 HIS g 23 ARG g 25 5 3 HELIX 63 AG9 SER g 26 VAL g 41 1 16 HELIX 64 AH1 VAL g 42 TYR g 47 1 6 HELIX 65 AH2 TYR g 47 GLY g 54 1 8 HELIX 66 AH3 PRO h 48 ALA h 58 1 11 HELIX 67 AH4 ALA h 58 SER h 75 1 18 HELIX 68 AH5 ILE i 10 ARG i 13 5 4 HELIX 69 AH6 VAL i 14 PHE i 36 1 23 HELIX 70 AH7 PHE i 36 LEU i 51 1 16 HELIX 71 AH8 LYS j 25 MET j 40 1 16 HELIX 72 AH9 LYS j 49 ALA j 57 1 9 HELIX 73 AI1 PRO j 60 ARG j 71 1 12 HELIX 74 AI2 LEU k 37 VAL k 58 1 22 HELIX 75 AI3 VAL k 58 LYS k 85 1 28 HELIX 76 AI4 SER m 27 LEU m 51 1 25 HELIX 77 AI5 TRP m 53 SER m 61 1 9 SHEET 1 AA1 3 VAL a 532 GLN a 533 0 SHEET 2 AA1 3 VAL d 109 GLY d 110 1 O GLY d 110 N VAL a 532 SHEET 3 AA1 3 TRP d 123 LEU d 124 -1 O LEU d 124 N VAL d 109 SHEET 1 AA2 5 VAL b 141 SER b 145 0 SHEET 2 AA2 5 TRP b 126 TYR b 130 -1 N TYR b 128 O PHE b 143 SHEET 3 AA2 5 MET b 115 GLY b 121 -1 N ILE b 120 O LYS b 127 SHEET 4 AA2 5 ILE b 175 ALA b 181 1 O ARG b 176 N ILE b 117 SHEET 5 AA2 5 ASN b 205 SER b 208 -1 O VAL b 207 N PHE b 177 SHEET 1 AA3 3 MET b 167 VAL b 169 0 SHEET 2 AA3 3 ILE b 236 ALA b 238 1 O GLU b 237 N MET b 167 SHEET 3 AA3 3 GLY b 215 PHE b 217 -1 N PHE b 217 O ILE b 236 SHEET 1 AA4 2 PHE b 188 ILE b 190 0 SHEET 2 AA4 2 ILE b 195 VAL b 197 -1 O ILE b 195 N ILE b 190 SHEET 1 AA5 2 ILE d 98 ILE d 99 0 SHEET 2 AA5 2 TYR d 141 LYS d 142 1 O LYS d 142 N ILE d 98 SSBOND 1 CYS j 27 CYS j 59 1555 1555 2.02 SSBOND 2 CYS j 37 CYS j 48 1555 1555 2.04 LINK NE2 HIS a 62 FE HEA a 602 1555 1555 2.72 LINK ND1 HIS a 241 CU CU a 601 1555 1555 2.14 LINK NE2 HIS a 290 CU CU a 601 1555 1555 2.16 LINK NE2 HIS a 291 CU CU a 601 1555 1555 2.14 LINK NE2 HIS a 376 FE HEA a 603 1555 1555 2.75 LINK NE2 HIS a 378 FE HEA a 602 1555 1555 2.70 LINK SG CYS d 134 ZN ZN d 201 1555 1555 2.86 CISPEP 1 SER a 520 PRO a 521 0 1.24 CISPEP 2 TRP c 124 PRO c 125 0 3.10 SITE 1 AC1 3 HIS a 241 HIS a 290 HIS a 291 SITE 1 AC2 23 PHE a 19 SER a 33 ILE a 36 ARG a 37 SITE 2 AC2 23 VAL a 59 HIS a 62 ALA a 63 MET a 66 SITE 3 AC2 23 ILE a 67 TRP a 127 TYR a 371 VAL a 374 SITE 4 AC2 23 PHE a 377 HIS a 378 LEU a 381 SER a 382 SITE 5 AC2 23 LEU a 389 PHE a 390 PHE a 425 MET a 428 SITE 6 AC2 23 ARG a 438 ARG a 439 ALA a 461 SITE 1 AC3 20 TRP a 237 VAL a 244 TYR a 245 HIS a 290 SITE 2 AC3 20 HIS a 291 ILE a 312 THR a 316 GLY a 317 SITE 3 AC3 20 GLY a 352 GLY a 355 LEU a 358 ALA a 359 SITE 4 AC3 20 ASP a 364 HIS a 368 VAL a 373 HIS a 376 SITE 5 AC3 20 PHE a 377 VAL a 380 LEU a 381 ARG a 438 SITE 1 AC4 4 HIS a 328 LEU a 339 MET b 57 ILE e 95 SITE 1 AC5 10 PHE a 95 PRO a 96 ARG a 97 ILE a 98 SITE 2 AC5 10 HIS c 15 SER c 62 TRP c 65 GLU c 72 SITE 3 AC5 10 HIS c 79 PHE c 94 SITE 1 AC6 8 ASN a 406 LYS a 408 PHE a 466 TYR a 470 SITE 2 AC6 8 LYS a 487 PHE e 94 LYS e 97 PHE h 54 SITE 1 AC7 6 HIS b 186 CYS b 221 GLU b 223 CYS b 225 SITE 2 AC7 6 HIS b 229 MET b 232 SITE 1 AC8 4 PHE a 268 GLY b 78 THR b 80 LYS i 11 SITE 1 AC9 15 THR a 354 PHE a 426 PHE a 430 THR b 19 SITE 2 AC9 15 PRO b 20 TYR b 21 ALA b 22 CYS b 23 SITE 3 AC9 15 TRP i 32 PHE i 36 PTY i 101 LEU m 51 SITE 4 AC9 15 PRO m 54 GLY m 55 TYR m 58 SITE 1 AD1 10 PHE c 66 ILE c 69 ALA c 73 THR c 74 SITE 2 AD1 10 ARG c 229 HIS c 234 LEU c 235 HIS c 239 SITE 3 AD1 10 VAL c 241 GLY c 242 SITE 1 AD2 16 SER a 204 THR a 208 PHE a 216 TYR c 189 SITE 2 AD2 16 ALA c 192 ALA c 193 PHE c 194 ILE c 196 SITE 3 AD2 16 TYR c 206 GLY c 210 TRP k 108 THR k 114 SITE 4 AD2 16 LEU k 115 PHE k 116 TRP k 117 ASN k 122 SITE 1 AD3 4 CYS d 111 HIS d 119 CYS d 134 CYS d 137 SITE 1 AD4 2 PCF e 202 PCF m 101 SITE 1 AD5 6 TYR a 452 ALA e 111 ARG e 114 GLY e 118 SITE 2 AD5 6 PTY e 201 PCF m 101 SITE 1 AD6 3 PTY b 303 TYR i 31 PHE i 36 SITE 1 AD7 7 ILE a 456 TYR b 21 PTY e 201 PCF e 202 SITE 2 AD7 7 VAL m 57 SER m 61 ALA m 63 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000