HEADER PROTEIN BINDING 28-APR-20 6YVJ TITLE EED IN COMPLEX WITH A TRIAZOLOPYRIMIDINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYCOMB PROTEIN EED; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HEED,EMBRYONIC ECTODERM DEVELOPMENT PROTEIN,WD PROTEIN COMPND 5 ASSOCIATING WITH INTEGRIN CYTOPLASMIC TAILS 1,WAIT-1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EED; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS METHYL TRANSFERASE EED PRC2 EPIGENETIC H3K27 WD40 INHIBITOR, PROTEIN KEYWDS 2 BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.A.READ REVDAT 3 24-JAN-24 6YVJ 1 REMARK REVDAT 2 14-JUL-21 6YVJ 1 COMPND JRNL REMARK HETNAM REVDAT 2 2 1 FORMUL REVDAT 1 12-MAY-21 6YVJ 0 JRNL AUTH D.H.O' DONOVAN,C.GREGSON,M.J.PACKER,R.GREENWOOD,K.G.PIKE, JRNL AUTH 2 S.KAWATKAR,A.BLOECHER,J.ROBINSON,J.READ,E.CODE,J.H.HSU, JRNL AUTH 3 M.SHEN,H.WOODS,P.BARTON,S.FILLERY,B.WILLIAMSON,P.B.RAWLINS, JRNL AUTH 4 S.K.BAGAL JRNL TITL FREE ENERGY PERTURBATION IN THE DESIGN OF EED LIGANDS AS JRNL TITL 2 INHIBITORS OF POLYCOMB REPRESSIVE COMPLEX 2 (PRC2) JRNL TITL 3 METHYLTRANSFERASE. JRNL REF BIOORG.MED.CHEM.LETT. V. 39 27904 2021 JRNL REFN ESSN 1464-3405 JRNL PMID 33684441 JRNL DOI 10.1016/J.BMCL.2021.127904 REMARK 2 REMARK 2 RESOLUTION. 1.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 67959 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 3351 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.89 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.44 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 4937 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.3050 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4706 REMARK 3 BIN R VALUE (WORKING SET) : 0.3040 REMARK 3 BIN FREE R VALUE : 0.3120 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.68 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 231 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5509 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 575 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.68 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 9.06440 REMARK 3 B22 (A**2) : -8.36100 REMARK 3 B33 (A**2) : -0.70340 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.230 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.134 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.114 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.127 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.110 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5784 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7866 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1955 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 135 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 842 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5784 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 742 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6048 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.00 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.31 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.84 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|82 - A|439 } REMARK 3 ORIGIN FOR THE GROUP (A): 25.9700 34.5002 6.6206 REMARK 3 T TENSOR REMARK 3 T11: -0.0785 T22: -0.0256 REMARK 3 T33: -0.0924 T12: -0.0213 REMARK 3 T13: -0.0248 T23: -0.0429 REMARK 3 L TENSOR REMARK 3 L11: 1.5584 L22: 1.1413 REMARK 3 L33: 0.8904 L12: -0.3487 REMARK 3 L13: -0.0545 L23: 0.1927 REMARK 3 S TENSOR REMARK 3 S11: -0.0115 S12: 0.1409 S13: 0.0476 REMARK 3 S21: -0.0757 S22: -0.0363 S23: 0.0296 REMARK 3 S31: -0.0188 S32: -0.0163 S33: 0.0478 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|81 - B|439 } REMARK 3 ORIGIN FOR THE GROUP (A): -24.0573 44.1376 17.8598 REMARK 3 T TENSOR REMARK 3 T11: -0.1149 T22: -0.0520 REMARK 3 T33: -0.1184 T12: -0.0511 REMARK 3 T13: 0.0024 T23: -0.0755 REMARK 3 L TENSOR REMARK 3 L11: 3.3983 L22: 0.6514 REMARK 3 L33: 1.4763 L12: 0.0313 REMARK 3 L13: 0.7822 L23: -0.0121 REMARK 3 S TENSOR REMARK 3 S11: -0.0246 S12: 0.0785 S13: 0.0444 REMARK 3 S21: 0.0505 S22: 0.0211 S23: -0.0312 REMARK 3 S31: -0.0922 S32: 0.2433 S33: 0.0035 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6YVJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-APR-20. REMARK 100 THE DEPOSITION ID IS D_1292108378. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92819 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.31 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68048 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.840 REMARK 200 RESOLUTION RANGE LOW (A) : 44.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.84 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 1.60000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 6SFB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 0.1M PCTP PH7.7, 130MM REMARK 280 MGCL2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.51000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.57000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.93500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.57000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.51000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.93500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 76 REMARK 465 LYS A 77 REMARK 465 CYS A 78 REMARK 465 LYS A 79 REMARK 465 TYR A 80 REMARK 465 SER A 81 REMARK 465 VAL A 393 REMARK 465 GLU A 394 REMARK 465 ASP A 395 REMARK 465 PRO A 396 REMARK 465 HIS A 397 REMARK 465 LYS A 398 REMARK 465 ALA A 399 REMARK 465 LYS A 400 REMARK 465 LEU A 440 REMARK 465 ARG A 441 REMARK 465 LYS B 76 REMARK 465 LYS B 77 REMARK 465 CYS B 78 REMARK 465 LYS B 79 REMARK 465 TYR B 80 REMARK 465 TYR B 280 REMARK 465 ASN B 281 REMARK 465 PRO B 282 REMARK 465 ASN B 283 REMARK 465 LYS B 284 REMARK 465 THR B 285 REMARK 465 ASN B 286 REMARK 465 VAL B 393 REMARK 465 GLU B 394 REMARK 465 ASP B 395 REMARK 465 PRO B 396 REMARK 465 HIS B 397 REMARK 465 LYS B 398 REMARK 465 ALA B 399 REMARK 465 LYS B 400 REMARK 465 LEU B 440 REMARK 465 ARG B 441 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 GLU A 107 CG CD OE1 OE2 REMARK 470 SER A 128 OG REMARK 470 GLN A 129 CG CD OE1 NE2 REMARK 470 GLN A 181 CG CD OE1 NE2 REMARK 470 GLU A 233 CG CD OE1 OE2 REMARK 470 LYS A 268 CG CD CE NZ REMARK 470 LYS A 275 CD CE NZ REMARK 470 GLU A 276 CD OE1 OE2 REMARK 470 LYS A 342 CD CE NZ REMARK 470 LYS A 408 CD CE NZ REMARK 470 LYS B 83 CG CD CE NZ REMARK 470 LYS B 106 CG CD CE NZ REMARK 470 GLU B 107 CG CD OE1 OE2 REMARK 470 HIS B 160 CG ND1 CD2 CE1 NE2 REMARK 470 GLN B 181 CG CD OE1 NE2 REMARK 470 LYS B 268 CG CD CE NZ REMARK 470 LYS B 275 CG CD CE NZ REMARK 470 GLU B 276 CG CD OE1 OE2 REMARK 470 ARG B 306 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 335 CD CE NZ REMARK 470 GLU B 337 CG CD OE1 OE2 REMARK 470 LYS B 342 CD CE NZ REMARK 470 LYS B 344 CD CE NZ REMARK 470 LYS B 375 CG CD CE NZ REMARK 470 GLU B 392 CG CD OE1 OE2 REMARK 470 LYS B 408 CE NZ REMARK 470 ARG B 439 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 118 -134.04 54.60 REMARK 500 LEU A 135 -63.07 -92.71 REMARK 500 ALA A 192 152.36 -49.71 REMARK 500 HIS A 213 4.44 81.67 REMARK 500 PHE A 299 147.43 -173.06 REMARK 500 SER A 323 -155.73 -119.15 REMARK 500 CYS A 361 58.06 -140.75 REMARK 500 TYR A 365 65.14 71.45 REMARK 500 HIS B 104 54.87 -90.46 REMARK 500 SER B 118 -132.55 49.95 REMARK 500 LEU B 135 -60.72 -92.74 REMARK 500 HIS B 213 3.25 86.32 REMARK 500 PHE B 299 146.66 -173.78 REMARK 500 SER B 323 -154.62 -119.24 REMARK 500 CYS B 361 58.11 -142.48 REMARK 500 TYR B 365 64.88 72.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 922 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH A 923 DISTANCE = 7.77 ANGSTROMS REMARK 525 HOH B 851 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH B 852 DISTANCE = 6.10 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue L9W A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EJR B 502 DBREF 6YVJ A 76 441 UNP O75530 EED_HUMAN 76 441 DBREF 6YVJ B 76 441 UNP O75530 EED_HUMAN 76 441 SEQRES 1 A 366 LYS LYS CYS LYS TYR SER PHE LYS CYS VAL ASN SER LEU SEQRES 2 A 366 LYS GLU ASP HIS ASN GLN PRO LEU PHE GLY VAL GLN PHE SEQRES 3 A 366 ASN TRP HIS SER LYS GLU GLY ASP PRO LEU VAL PHE ALA SEQRES 4 A 366 THR VAL GLY SER ASN ARG VAL THR LEU TYR GLU CYS HIS SEQRES 5 A 366 SER GLN GLY GLU ILE ARG LEU LEU GLN SER TYR VAL ASP SEQRES 6 A 366 ALA ASP ALA ASP GLU ASN PHE TYR THR CYS ALA TRP THR SEQRES 7 A 366 TYR ASP SER ASN THR SER HIS PRO LEU LEU ALA VAL ALA SEQRES 8 A 366 GLY SER ARG GLY ILE ILE ARG ILE ILE ASN PRO ILE THR SEQRES 9 A 366 MET GLN CYS ILE LYS HIS TYR VAL GLY HIS GLY ASN ALA SEQRES 10 A 366 ILE ASN GLU LEU LYS PHE HIS PRO ARG ASP PRO ASN LEU SEQRES 11 A 366 LEU LEU SER VAL SER LYS ASP HIS ALA LEU ARG LEU TRP SEQRES 12 A 366 ASN ILE GLN THR ASP THR LEU VAL ALA ILE PHE GLY GLY SEQRES 13 A 366 VAL GLU GLY HIS ARG ASP GLU VAL LEU SER ALA ASP TYR SEQRES 14 A 366 ASP LEU LEU GLY GLU LYS ILE MET SER CYS GLY MET ASP SEQRES 15 A 366 HIS SER LEU LYS LEU TRP ARG ILE ASN SER LYS ARG MET SEQRES 16 A 366 MET ASN ALA ILE LYS GLU SER TYR ASP TYR ASN PRO ASN SEQRES 17 A 366 LYS THR ASN ARG PRO PHE ILE SER GLN LYS ILE HIS PHE SEQRES 18 A 366 PRO ASP PHE SER THR ARG ASP ILE HIS ARG ASN TYR VAL SEQRES 19 A 366 ASP CYS VAL ARG TRP LEU GLY ASP LEU ILE LEU SER LYS SEQRES 20 A 366 SER CYS GLU ASN ALA ILE VAL CYS TRP LYS PRO GLY LYS SEQRES 21 A 366 MET GLU ASP ASP ILE ASP LYS ILE LYS PRO SER GLU SER SEQRES 22 A 366 ASN VAL THR ILE LEU GLY ARG PHE ASP TYR SER GLN CYS SEQRES 23 A 366 ASP ILE TRP TYR MET ARG PHE SER MET ASP PHE TRP GLN SEQRES 24 A 366 LYS MET LEU ALA LEU GLY ASN GLN VAL GLY LYS LEU TYR SEQRES 25 A 366 VAL TRP ASP LEU GLU VAL GLU ASP PRO HIS LYS ALA LYS SEQRES 26 A 366 CYS THR THR LEU THR HIS HIS LYS CYS GLY ALA ALA ILE SEQRES 27 A 366 ARG GLN THR SER PHE SER ARG ASP SER SER ILE LEU ILE SEQRES 28 A 366 ALA VAL CYS ASP ASP ALA SER ILE TRP ARG TRP ASP ARG SEQRES 29 A 366 LEU ARG SEQRES 1 B 366 LYS LYS CYS LYS TYR SER PHE LYS CYS VAL ASN SER LEU SEQRES 2 B 366 LYS GLU ASP HIS ASN GLN PRO LEU PHE GLY VAL GLN PHE SEQRES 3 B 366 ASN TRP HIS SER LYS GLU GLY ASP PRO LEU VAL PHE ALA SEQRES 4 B 366 THR VAL GLY SER ASN ARG VAL THR LEU TYR GLU CYS HIS SEQRES 5 B 366 SER GLN GLY GLU ILE ARG LEU LEU GLN SER TYR VAL ASP SEQRES 6 B 366 ALA ASP ALA ASP GLU ASN PHE TYR THR CYS ALA TRP THR SEQRES 7 B 366 TYR ASP SER ASN THR SER HIS PRO LEU LEU ALA VAL ALA SEQRES 8 B 366 GLY SER ARG GLY ILE ILE ARG ILE ILE ASN PRO ILE THR SEQRES 9 B 366 MET GLN CYS ILE LYS HIS TYR VAL GLY HIS GLY ASN ALA SEQRES 10 B 366 ILE ASN GLU LEU LYS PHE HIS PRO ARG ASP PRO ASN LEU SEQRES 11 B 366 LEU LEU SER VAL SER LYS ASP HIS ALA LEU ARG LEU TRP SEQRES 12 B 366 ASN ILE GLN THR ASP THR LEU VAL ALA ILE PHE GLY GLY SEQRES 13 B 366 VAL GLU GLY HIS ARG ASP GLU VAL LEU SER ALA ASP TYR SEQRES 14 B 366 ASP LEU LEU GLY GLU LYS ILE MET SER CYS GLY MET ASP SEQRES 15 B 366 HIS SER LEU LYS LEU TRP ARG ILE ASN SER LYS ARG MET SEQRES 16 B 366 MET ASN ALA ILE LYS GLU SER TYR ASP TYR ASN PRO ASN SEQRES 17 B 366 LYS THR ASN ARG PRO PHE ILE SER GLN LYS ILE HIS PHE SEQRES 18 B 366 PRO ASP PHE SER THR ARG ASP ILE HIS ARG ASN TYR VAL SEQRES 19 B 366 ASP CYS VAL ARG TRP LEU GLY ASP LEU ILE LEU SER LYS SEQRES 20 B 366 SER CYS GLU ASN ALA ILE VAL CYS TRP LYS PRO GLY LYS SEQRES 21 B 366 MET GLU ASP ASP ILE ASP LYS ILE LYS PRO SER GLU SER SEQRES 22 B 366 ASN VAL THR ILE LEU GLY ARG PHE ASP TYR SER GLN CYS SEQRES 23 B 366 ASP ILE TRP TYR MET ARG PHE SER MET ASP PHE TRP GLN SEQRES 24 B 366 LYS MET LEU ALA LEU GLY ASN GLN VAL GLY LYS LEU TYR SEQRES 25 B 366 VAL TRP ASP LEU GLU VAL GLU ASP PRO HIS LYS ALA LYS SEQRES 26 B 366 CYS THR THR LEU THR HIS HIS LYS CYS GLY ALA ALA ILE SEQRES 27 B 366 ARG GLN THR SER PHE SER ARG ASP SER SER ILE LEU ILE SEQRES 28 B 366 ALA VAL CYS ASP ASP ALA SER ILE TRP ARG TRP ASP ARG SEQRES 29 B 366 LEU ARG HET L9W A 501 30 HET GOL B 501 6 HET EJR B 502 56 HETNAM L9W N-(2,3-DIHYDRO-1-BENZOFURAN-4-YLMETHYL)-8-(4- HETNAM 2 L9W METHYLSULFONYLPHENYL)-[1,2,4]TRIAZOLO[4,3-C]PYRIMIDIN- HETNAM 3 L9W 5-AMINE HETNAM GOL GLYCEROL HETNAM EJR N-[(5-FLUORANYL-2,3-DIHYDRO-1-BENZOFURAN-4-YL)METHYL]- HETNAM 2 EJR 8-(2-METHYLPYRIDIN-3-YL)-[1,2,4]TRIAZOLO[4,3- HETNAM 3 EJR C]PYRIMIDIN-5-AMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 L9W C21 H19 N5 O3 S FORMUL 4 GOL C3 H8 O3 FORMUL 5 EJR C20 H17 F N6 O FORMUL 6 HOH *575(H2 O) HELIX 1 AA1 SER A 267 TYR A 280 1 14 HELIX 2 AA2 SER B 267 ASP B 279 1 13 SHEET 1 AA1 4 LYS A 83 LYS A 89 0 SHEET 2 AA1 4 SER A 433 ASP A 438 -1 O ILE A 434 N LEU A 88 SHEET 3 AA1 4 ILE A 424 CYS A 429 -1 N LEU A 425 O TRP A 437 SHEET 4 AA1 4 ILE A 413 PHE A 418 -1 N SER A 417 O ILE A 426 SHEET 1 AA2 4 LEU A 96 PHE A 101 0 SHEET 2 AA2 4 LEU A 111 GLY A 117 -1 O ALA A 114 N GLN A 100 SHEET 3 AA2 4 ARG A 120 CYS A 126 -1 O CYS A 126 N LEU A 111 SHEET 4 AA2 4 ILE A 132 VAL A 139 -1 O TYR A 138 N VAL A 121 SHEET 1 AA3 4 PHE A 147 TYR A 154 0 SHEET 2 AA3 4 PRO A 161 GLY A 167 -1 O ALA A 164 N ALA A 151 SHEET 3 AA3 4 ILE A 172 ASN A 176 -1 O ILE A 175 N LEU A 163 SHEET 4 AA3 4 GLN A 181 TYR A 186 -1 O LYS A 184 N ILE A 174 SHEET 1 AA4 5 ILE A 193 PHE A 198 0 SHEET 2 AA4 5 LEU A 205 SER A 210 -1 O LEU A 207 N LYS A 197 SHEET 3 AA4 5 LEU A 215 ASN A 219 -1 O TRP A 218 N LEU A 206 SHEET 4 AA4 5 THR A 224 PHE A 229 -1 O THR A 224 N ASN A 219 SHEET 5 AA4 5 GLN A 292 ILE A 294 1 O ILE A 294 N ILE A 228 SHEET 1 AA5 4 VAL A 239 TYR A 244 0 SHEET 2 AA5 4 LYS A 250 GLY A 255 -1 O MET A 252 N ASP A 243 SHEET 3 AA5 4 LEU A 260 ARG A 264 -1 O TRP A 263 N ILE A 251 SHEET 4 AA5 4 PHE A 299 THR A 301 -1 O PHE A 299 N LEU A 262 SHEET 1 AA6 4 CYS A 311 LEU A 315 0 SHEET 2 AA6 4 LEU A 318 LYS A 322 -1 O LEU A 318 N LEU A 315 SHEET 3 AA6 4 ALA A 327 PRO A 333 -1 O VAL A 329 N SER A 321 SHEET 4 AA6 4 VAL A 350 ASP A 357 -1 O LEU A 353 N CYS A 330 SHEET 1 AA7 4 PHE A 368 MET A 370 0 SHEET 2 AA7 4 MET A 376 GLY A 380 -1 O ALA A 378 N SER A 369 SHEET 3 AA7 4 LEU A 386 ASP A 390 -1 O TYR A 387 N LEU A 379 SHEET 4 AA7 4 THR A 402 LEU A 404 -1 O LEU A 404 N LEU A 386 SHEET 1 AA8 4 LYS B 83 LYS B 89 0 SHEET 2 AA8 4 SER B 433 ASP B 438 -1 O ILE B 434 N LEU B 88 SHEET 3 AA8 4 ILE B 424 CYS B 429 -1 N LEU B 425 O TRP B 437 SHEET 4 AA8 4 ILE B 413 PHE B 418 -1 N SER B 417 O ILE B 426 SHEET 1 AA9 4 GLY B 98 PHE B 101 0 SHEET 2 AA9 4 LEU B 111 GLY B 117 -1 O ALA B 114 N GLN B 100 SHEET 3 AA9 4 ARG B 120 CYS B 126 -1 O CYS B 126 N LEU B 111 SHEET 4 AA9 4 ILE B 132 VAL B 139 -1 O TYR B 138 N VAL B 121 SHEET 1 AB1 4 PHE B 147 TYR B 154 0 SHEET 2 AB1 4 PRO B 161 GLY B 167 -1 O ALA B 164 N ALA B 151 SHEET 3 AB1 4 ILE B 172 ASN B 176 -1 O ILE B 175 N LEU B 163 SHEET 4 AB1 4 GLN B 181 TYR B 186 -1 O LYS B 184 N ILE B 174 SHEET 1 AB2 5 ILE B 193 PHE B 198 0 SHEET 2 AB2 5 LEU B 205 SER B 210 -1 O LEU B 207 N LYS B 197 SHEET 3 AB2 5 LEU B 215 ASN B 219 -1 O TRP B 218 N LEU B 206 SHEET 4 AB2 5 THR B 224 PHE B 229 -1 O THR B 224 N ASN B 219 SHEET 5 AB2 5 GLN B 292 ILE B 294 1 O ILE B 294 N ILE B 228 SHEET 1 AB3 4 VAL B 239 TYR B 244 0 SHEET 2 AB3 4 LYS B 250 GLY B 255 -1 O CYS B 254 N LEU B 240 SHEET 3 AB3 4 LEU B 260 ARG B 264 -1 O TRP B 263 N ILE B 251 SHEET 4 AB3 4 PHE B 299 THR B 301 -1 O PHE B 299 N LEU B 262 SHEET 1 AB4 4 CYS B 311 LEU B 315 0 SHEET 2 AB4 4 LEU B 318 LYS B 322 -1 O LEU B 318 N LEU B 315 SHEET 3 AB4 4 ALA B 327 PRO B 333 -1 O VAL B 329 N SER B 321 SHEET 4 AB4 4 VAL B 350 ASP B 357 -1 O LEU B 353 N CYS B 330 SHEET 1 AB5 4 PHE B 368 MET B 370 0 SHEET 2 AB5 4 MET B 376 GLY B 380 -1 O ALA B 378 N SER B 369 SHEET 3 AB5 4 LEU B 386 ASP B 390 -1 O TYR B 387 N LEU B 379 SHEET 4 AB5 4 THR B 402 LEU B 404 -1 O LEU B 404 N LEU B 386 SITE 1 AC1 15 PHE A 97 TYR A 148 ASN A 194 LYS A 211 SITE 2 AC1 15 LEU A 240 LYS A 284 THR A 285 ASP A 310 SITE 3 AC1 15 TYR A 365 MET A 366 ARG A 367 ARG A 414 SITE 4 AC1 15 HOH A 608 HOH A 685 HOH A 735 SITE 1 AC2 7 GLN B 100 PHE B 101 TRP B 103 SER B 417 SITE 2 AC2 7 HOH B 617 HOH B 625 HOH B 710 SITE 1 AC3 11 PHE B 97 TYR B 148 ASN B 194 LYS B 211 SITE 2 AC3 11 LEU B 240 ASP B 310 TYR B 365 MET B 366 SITE 3 AC3 11 ARG B 367 ARG B 414 HOH B 685 CRYST1 87.020 89.870 99.140 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011492 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011127 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010087 0.00000