HEADER PEPTIDE BINDING PROTEIN 30-APR-20 6YX2 TITLE CRYSTAL STRUCTURE OF SHANK1 PDZ IN COMPLEX WITH A PEPTIDE-SMALL TITLE 2 MOLECULE HYBRID COMPND MOL_ID: 1; COMPND 2 MOLECULE: SH3 AND MULTIPLE ANKYRIN REPEAT DOMAINS PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SHANK1,SOMATOSTATIN RECEPTOR-INTERACTING PROTEIN,SSTRIP; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PWW-THR-ARG-LEU; COMPND 8 CHAIN: C, D; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SHANK1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630 KEYWDS PROTEIN PROTEIN INTERACTIONS, PDZ DOMAIN HYBRID STRUCTURES, FRAGMENT- KEYWDS 2 BASED DRUG DISCOVERY, BETA-SHEETS, ACYLHYDRAZONE, PEPTIDE BINDING KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Z.HEGEDUS,F.HOBOR,D.K.SHOEMARK,S.CELIS,L.J.LIAN,C.H.TRINH, AUTHOR 2 R.B.SESSIONS,T.A.EDWARDS,A.J.WILSON REVDAT 3 24-JAN-24 6YX2 1 REMARK REVDAT 2 07-JUL-21 6YX2 1 JRNL REVDAT 1 20-JAN-21 6YX2 0 JRNL AUTH Z.HEGEDUS,F.HOBOR,D.K.SHOEMARK,S.CELIS,L.Y.LIAN,C.H.TRINH, JRNL AUTH 2 R.B.SESSIONS,T.A.EDWARDS,A.J.WILSON JRNL TITL IDENTIFICATION OF BETA-STRAND MEDIATED PROTEIN-PROTEIN JRNL TITL 2 INTERACTION INHIBITORS USING LIGAND-DIRECTED FRAGMENT JRNL TITL 3 LIGATION. JRNL REF CHEM SCI V. 12 2286 2021 JRNL REFN ISSN 2041-6520 JRNL PMID 34163995 JRNL DOI 10.1039/D0SC05694D REMARK 2 REMARK 2 RESOLUTION. 1.62 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.62 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 33504 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1693 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 52.2600 - 3.7000 1.00 2845 155 0.1813 0.2137 REMARK 3 2 3.7000 - 2.9400 1.00 2693 165 0.1893 0.2397 REMARK 3 3 2.9400 - 2.5700 1.00 2695 126 0.2109 0.2135 REMARK 3 4 2.5700 - 2.3300 1.00 2682 137 0.2106 0.2396 REMARK 3 5 2.3300 - 2.1700 1.00 2630 152 0.1997 0.2367 REMARK 3 6 2.1700 - 2.0400 1.00 2664 128 0.2090 0.2610 REMARK 3 7 2.0400 - 1.9400 1.00 2650 134 0.2320 0.2952 REMARK 3 8 1.9400 - 1.8500 1.00 2622 161 0.2451 0.2851 REMARK 3 9 1.8500 - 1.7800 1.00 2600 141 0.2693 0.3307 REMARK 3 10 1.7800 - 1.7200 1.00 2634 134 0.3172 0.3706 REMARK 3 11 1.7200 - 1.6700 1.00 2597 141 0.3814 0.4146 REMARK 3 12 1.6700 - 1.6200 0.94 2499 119 0.4449 0.4829 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.258 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.779 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.65 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1774 REMARK 3 ANGLE : 0.734 2386 REMARK 3 CHIRALITY : 0.053 265 REMARK 3 PLANARITY : 0.006 311 REMARK 3 DIHEDRAL : 16.642 666 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 651 THROUGH 680 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.5275 4.8236 -23.2728 REMARK 3 T TENSOR REMARK 3 T11: 0.2446 T22: 0.2958 REMARK 3 T33: 0.2122 T12: -0.0044 REMARK 3 T13: 0.0222 T23: 0.0530 REMARK 3 L TENSOR REMARK 3 L11: 1.6896 L22: 0.6166 REMARK 3 L33: 0.3842 L12: 0.5145 REMARK 3 L13: 0.4265 L23: 0.3479 REMARK 3 S TENSOR REMARK 3 S11: 0.1520 S12: 0.0048 S13: 0.1218 REMARK 3 S21: 0.0784 S22: -0.1007 S23: -0.0359 REMARK 3 S31: -0.0940 S32: 0.1436 S33: -0.0023 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 681 THROUGH 699 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.7799 -4.0285 -11.1495 REMARK 3 T TENSOR REMARK 3 T11: 0.4460 T22: 0.3502 REMARK 3 T33: 0.2975 T12: -0.1156 REMARK 3 T13: 0.0723 T23: 0.1284 REMARK 3 L TENSOR REMARK 3 L11: 0.0223 L22: 0.8451 REMARK 3 L33: 0.3896 L12: 0.0699 REMARK 3 L13: 0.0168 L23: 0.4965 REMARK 3 S TENSOR REMARK 3 S11: 0.2167 S12: -1.0953 S13: -0.4464 REMARK 3 S21: 0.6139 S22: -0.4058 S23: 0.4341 REMARK 3 S31: -0.6563 S32: 0.2113 S33: -0.0942 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 700 THROUGH 759 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.2431 0.2281 -24.0510 REMARK 3 T TENSOR REMARK 3 T11: 0.2159 T22: 0.1921 REMARK 3 T33: 0.2144 T12: -0.0209 REMARK 3 T13: -0.0161 T23: 0.0428 REMARK 3 L TENSOR REMARK 3 L11: 2.4737 L22: 0.7679 REMARK 3 L33: 1.5004 L12: 0.0459 REMARK 3 L13: -0.6430 L23: -0.5364 REMARK 3 S TENSOR REMARK 3 S11: 0.0385 S12: 0.1642 S13: -0.0536 REMARK 3 S21: 0.1050 S22: -0.0256 S23: -0.1520 REMARK 3 S31: 0.0091 S32: 0.1393 S33: -0.0001 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 802 THROUGH 804 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.1614 -2.0262 -25.6537 REMARK 3 T TENSOR REMARK 3 T11: 0.3035 T22: 0.5372 REMARK 3 T33: 0.4647 T12: 0.0362 REMARK 3 T13: -0.0643 T23: 0.0023 REMARK 3 L TENSOR REMARK 3 L11: 0.0103 L22: 0.0504 REMARK 3 L33: 0.0054 L12: 0.0327 REMARK 3 L13: -0.0091 L23: -0.0065 REMARK 3 S TENSOR REMARK 3 S11: -0.3010 S12: 0.4281 S13: 0.0729 REMARK 3 S21: 0.1906 S22: 0.1328 S23: -0.3204 REMARK 3 S31: 0.0887 S32: 0.4054 S33: 0.0015 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 651 THROUGH 685 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.7080 3.2778 -4.6739 REMARK 3 T TENSOR REMARK 3 T11: 0.2347 T22: 0.2765 REMARK 3 T33: 0.2103 T12: -0.0352 REMARK 3 T13: 0.0352 T23: -0.0529 REMARK 3 L TENSOR REMARK 3 L11: 1.6317 L22: -0.1359 REMARK 3 L33: 0.1597 L12: -0.0144 REMARK 3 L13: -0.4098 L23: -0.2498 REMARK 3 S TENSOR REMARK 3 S11: 0.1620 S12: -0.2832 S13: 0.1822 REMARK 3 S21: -0.0508 S22: -0.1028 S23: 0.0128 REMARK 3 S31: -0.0542 S32: 0.0641 S33: 0.0002 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 686 THROUGH 690 ) REMARK 3 ORIGIN FOR THE GROUP (A): -51.3657 -13.6635 -14.9254 REMARK 3 T TENSOR REMARK 3 T11: 0.3687 T22: 0.1985 REMARK 3 T33: 0.4531 T12: -0.0040 REMARK 3 T13: 0.0952 T23: -0.0884 REMARK 3 L TENSOR REMARK 3 L11: 0.0945 L22: 0.0091 REMARK 3 L33: 0.0592 L12: -0.0183 REMARK 3 L13: -0.0848 L23: 0.0284 REMARK 3 S TENSOR REMARK 3 S11: 0.0938 S12: 0.2364 S13: -0.1614 REMARK 3 S21: -0.2816 S22: 0.0140 S23: -0.0150 REMARK 3 S31: 0.1995 S32: -0.2110 S33: 0.0042 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 691 THROUGH 761 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.6616 1.2610 -4.0578 REMARK 3 T TENSOR REMARK 3 T11: 0.1921 T22: 0.1760 REMARK 3 T33: 0.1956 T12: -0.0011 REMARK 3 T13: -0.0090 T23: -0.0328 REMARK 3 L TENSOR REMARK 3 L11: 2.7985 L22: 2.1085 REMARK 3 L33: 1.7299 L12: 0.1531 REMARK 3 L13: -1.1732 L23: -0.0520 REMARK 3 S TENSOR REMARK 3 S11: 0.0722 S12: -0.2824 S13: 0.0317 REMARK 3 S21: -0.0805 S22: -0.0191 S23: -0.0756 REMARK 3 S31: -0.0216 S32: 0.0569 S33: 0.0133 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 802 THROUGH 804 ) REMARK 3 ORIGIN FOR THE GROUP (A): -67.8322 -1.3623 -0.1431 REMARK 3 T TENSOR REMARK 3 T11: 0.2874 T22: 0.4924 REMARK 3 T33: 0.3324 T12: -0.0077 REMARK 3 T13: 0.0014 T23: -0.0785 REMARK 3 L TENSOR REMARK 3 L11: 0.0226 L22: 0.0383 REMARK 3 L33: 0.0358 L12: 0.0270 REMARK 3 L13: -0.0294 L23: -0.0399 REMARK 3 S TENSOR REMARK 3 S11: 0.3363 S12: -0.0447 S13: 0.4328 REMARK 3 S21: 0.3215 S22: 0.0811 S23: 0.1529 REMARK 3 S31: -0.2600 S32: -0.3001 S33: 0.0012 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6YX2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-APR-20. REMARK 100 THE DEPOSITION ID IS D_1292107017. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.75 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33616 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.618 REMARK 200 RESOLUTION RANGE LOW (A) : 65.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.62 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 1.12000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1Q3O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES 7.75 PEG 400 40%, PH 7.75, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.71750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.17300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.82100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.17300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.71750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.82100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 683 REMARK 465 GLN A 684 REMARK 465 THR A 685 REMARK 465 PRO A 686 REMARK 465 ILE A 687 REMARK 465 GLU A 688 REMARK 465 PRO A 760 REMARK 465 ASP A 761 REMARK 465 MET A 762 REMARK 465 MET B 762 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 758 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 986 O HOH D 1007 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PWW C 901 and THR C REMARK 800 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PWW D 901 and THR D REMARK 800 802 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6YWZ RELATED DB: PDB REMARK 900 RELATED ID: 6YX0 RELATED DB: PDB REMARK 900 RELATED ID: 6YX1 RELATED DB: PDB DBREF 6YX2 A 654 762 UNP Q9Y566 SHAN1_HUMAN 654 762 DBREF 6YX2 B 654 762 UNP Q9Y566 SHAN1_HUMAN 654 762 DBREF 6YX2 C 802 804 PDB 6YX2 6YX2 802 804 DBREF 6YX2 D 802 804 PDB 6YX2 6YX2 802 804 SEQADV 6YX2 GLY A 651 UNP Q9Y566 EXPRESSION TAG SEQADV 6YX2 PRO A 652 UNP Q9Y566 EXPRESSION TAG SEQADV 6YX2 LEU A 653 UNP Q9Y566 EXPRESSION TAG SEQADV 6YX2 GLY B 651 UNP Q9Y566 EXPRESSION TAG SEQADV 6YX2 PRO B 652 UNP Q9Y566 EXPRESSION TAG SEQADV 6YX2 LEU B 653 UNP Q9Y566 EXPRESSION TAG SEQRES 1 A 112 GLY PRO LEU GLY SER ASP TYR ILE ILE LYS GLU LYS THR SEQRES 2 A 112 VAL LEU LEU GLN LYS LYS ASP SER GLU GLY PHE GLY PHE SEQRES 3 A 112 VAL LEU ARG GLY ALA LYS ALA GLN THR PRO ILE GLU GLU SEQRES 4 A 112 PHE THR PRO THR PRO ALA PHE PRO ALA LEU GLN TYR LEU SEQRES 5 A 112 GLU SER VAL ASP GLU GLY GLY VAL ALA TRP ARG ALA GLY SEQRES 6 A 112 LEU ARG MET GLY ASP PHE LEU ILE GLU VAL ASN GLY GLN SEQRES 7 A 112 ASN VAL VAL LYS VAL GLY HIS ARG GLN VAL VAL ASN MET SEQRES 8 A 112 ILE ARG GLN GLY GLY ASN THR LEU MET VAL LYS VAL VAL SEQRES 9 A 112 MET VAL THR ARG HIS PRO ASP MET SEQRES 1 B 112 GLY PRO LEU GLY SER ASP TYR ILE ILE LYS GLU LYS THR SEQRES 2 B 112 VAL LEU LEU GLN LYS LYS ASP SER GLU GLY PHE GLY PHE SEQRES 3 B 112 VAL LEU ARG GLY ALA LYS ALA GLN THR PRO ILE GLU GLU SEQRES 4 B 112 PHE THR PRO THR PRO ALA PHE PRO ALA LEU GLN TYR LEU SEQRES 5 B 112 GLU SER VAL ASP GLU GLY GLY VAL ALA TRP ARG ALA GLY SEQRES 6 B 112 LEU ARG MET GLY ASP PHE LEU ILE GLU VAL ASN GLY GLN SEQRES 7 B 112 ASN VAL VAL LYS VAL GLY HIS ARG GLN VAL VAL ASN MET SEQRES 8 B 112 ILE ARG GLN GLY GLY ASN THR LEU MET VAL LYS VAL VAL SEQRES 9 B 112 MET VAL THR ARG HIS PRO ASP MET SEQRES 1 C 3 THR ARG LEU SEQRES 1 D 3 THR ARG LEU HET PWW C 901 19 HET PWW D 901 19 HETNAM PWW 4-[[(~{E})-5- HETNAM 2 PWW OXIDANYLIDENEPENTANOYLDIAZENYL]METHYL]BENZOIC ACID FORMUL 5 PWW 2(C13 H14 N2 O4) FORMUL 7 HOH *240(H2 O) HELIX 1 AA1 GLY A 709 GLY A 715 1 7 HELIX 2 AA2 GLY A 734 GLY A 745 1 12 HELIX 3 AA3 GLY B 709 GLY B 715 1 7 HELIX 4 AA4 GLY B 734 GLY B 745 1 12 SHEET 1 AA1 8 GLN A 728 ASN A 729 0 SHEET 2 AA1 8 PHE A 721 VAL A 725 -1 N VAL A 725 O GLN A 728 SHEET 3 AA1 8 THR A 748 ARG A 758 -1 O LYS A 752 N ILE A 723 SHEET 4 AA1 8 ASP A 656 GLN A 667 -1 N LEU A 666 O LEU A 749 SHEET 5 AA1 8 ASP B 656 GLN B 667 -1 O ILE B 659 N TYR A 657 SHEET 6 AA1 8 THR B 748 ARG B 758 -1 O LEU B 749 N LEU B 666 SHEET 7 AA1 8 PHE B 721 VAL B 725 -1 N PHE B 721 O VAL B 754 SHEET 8 AA1 8 GLN B 728 ASN B 729 -1 O GLN B 728 N VAL B 725 SHEET 1 AA2 2 PHE A 676 GLY A 680 0 SHEET 2 AA2 2 GLN A 700 VAL A 705 -1 O TYR A 701 N ARG A 679 SHEET 1 AA3 3 GLN B 700 VAL B 705 0 SHEET 2 AA3 3 PHE B 676 GLY B 680 -1 N ARG B 679 O TYR B 701 SHEET 3 AA3 3 ARG D 803 LEU D 804 -1 O LEU D 804 N PHE B 676 LINK N THR C 802 C14 PWW C 901 1555 1555 1.43 LINK N THR D 802 C14 PWW D 901 1555 1555 1.43 SITE 1 AC1 13 VAL A 677 LEU A 678 HIS A 735 ARG B 679 SITE 2 AC1 13 GLY B 680 ALA B 683 HIS B 735 HOH B 911 SITE 3 AC1 13 ARG C 803 LEU C 804 HOH C1001 HOH C1002 SITE 4 AC1 13 PWW D 901 SITE 1 AC2 10 VAL B 677 LEU B 678 ARG B 679 GLY B 680 SITE 2 AC2 10 HIS B 735 ARG B 736 PWW C 901 ARG D 803 SITE 3 AC2 10 LEU D 804 HOH D1004 CRYST1 45.435 65.642 86.346 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022009 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015234 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011581 0.00000